Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0007140

Physical Location & Seq

Genomic Coordinates Forward (+)

4177904 .. 4182674

Gene Structure 4771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00161410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGGTTTGGGTTTTAGGCTGAACCTCAAGTGTGGTTTTCCAATTCATAATTCTCATTGGCAGACCAATTCTCCTTCCAAGCTTTCTTCAACTTCTGTTAGAGGCAGGGAGGGCTCTTTCAGTTCAGCAAGGCTGTCCTTTTTGTCTGTTATTTCTGAGGAATGTGAGACTTCTAATAAAGATTCTTTCAAAGTGTACACGTGTCCATCTGCATCCCCACAACTCTTAGATGATGGTTACTCAGAAGTGGAAGAGAAGATGAACATTAGGGGGATGTCAAAGAGTGCCTCAACTAACATGATTGATGATCAAGGGCACAGCTTTATATCCAGTGCAGGGTTAAGAACATCCCATTTTAGCTTGTTACTGCAAAATCTTAATGTTTTGGAGGAGACTTTTGCTGATTCAGATGTGTCAAAGTTGGAAAAGGAGATCCTTTTGCAATTAGGAAGGCTTGGAGCTCTGAAGTTATTTGATATTTGTCTATCGAGAACGCTTAAAACCTCGAGCTTTTTGGATTTATCAGACATACCTATTGAGCCGATTGAAGAGCATAAGATGGAAAGGATGAATATTGTCCGTTCTGGCAAAAGGGAAGAACGAAAATTAAGGAAAAGAACATCAGATGATTCCAAAAAGTTTAATGGTTCCTTGCCTTTAAAACCAATGAAGGAAGGTTTTAAAAAACCTACTCCTTCATCATTTAGAAGAGCATCGAATTCTAGAAGTCGAAGACTATTGTTGGCTAAAAATGAGGCAGAAATGTCAGTCGGAGTTAAGGTGATCGCTGACTTGGAGAGGCTTAAAGCAACGTTGGAGAAGGAAACTGGTAAAGTACCGACCTTAAGATGCTGGGCAGAAGCAGCTAGAGTTGATGAAAAGGTGCTGCAACAACAATTGCATTTCGGTTGGTATTGCCAGGATGAGCTTGTAAGGAGCAGTCGGTCCTTGGTTCTATACCTTGCTCGAAACTATAGAGGACTTGGAGTTGCCTTGGATGATTTGCTGCAGGCTGGAAACCTGGGTCTCCTACAAGGTGCAGAAAGATTTGATCCCTCGCGGGGTTACAGATTCTCGACCTATGTCCAATACTGGATAAGAAAATCAATGTCAAGATTGCTGGCACAACATGCCAGAGGGATCAAAATTCCTAACACACTAAGTAAAGCAATAAATCGGATACAGAAGGCTCGAAAAGCCAATTACAGCAGCCACATGAAATACCCAGATGATGAAGAAATTGCAAAGATTACAGGTCTTTCTTTGGCGAAAATCAGATCGGCTAGCAGATGTCTGAGAGTTGTGGGTTCAGTAGATCATAAGATATGGGAATGCTCAGCTGGGACGTATATGGAATTTACTCCAGATATAGCAGTAGAGAGTCCTGAAGAACCTGTCATGCGGCAACACATGAAAAACGACATTCATGATCTGCTGGAAGGCTTGAATTCTAGAGAGAAGCAAGTTTTGGCACTACGATATGGTCTAAACTACTGCAACCCCAAGTCACTTGAGGAGATTGGAAGGCTTTTCCATGTGAGCAAGGAGTGGATACGAAAGATAGAAAAGAATGCTCTGACCAAGCTGAGGGATGAAGAAACCAACAAAAACTTGAGCCATTATTTGAAGCAGTGCTCTCCCCTGTTGAGCAGTCACAGACCAATAGTCTTCCACCCTTCCATTGACAATCATAGTCAAACTTCGGATAAGCAGCCTCCGTCGGTGCCTTGCTGGCACCACCTCTTCCCTTGGGTCACGCAAACAACCTCCTCCGCGGGTGACGCAACAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000988 GO:0000990 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0016987 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0097747 GO:0104004 GO:0140098 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2000142 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sigma70_r2 Sigma70_r3 Sigma70_r4

Protein Analysis

597

Amino Acids

67.69

Weight (kDa)

9.33

Isoelectric Point (pI)

49.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sigma70_r2	PF04542	310 - 379	3.6e-16	Sigma-70 region 2
Sigma70_r3	PF04539	390 - 464	1.3e-08	Sigma-70 region 3
Sigma70_r4	PF04545	478 - 530	3.3e-14	Sigma-70, region 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53920 AT3G53920
fragaria_vesca	FvH4_2g35110 FvH4_2g35110 FvH4_2g35110
malus_domestica	MD08G1108600.v1.1 MD15G1089100.v1.1
prunus_persica	Prupe.1G443200_v2.0.a1 Prupe.1G443200_v2.0.a1 Prupe.1G443200_v2.0.a1
pyrus_communis	pycom08g09050 pycom15g08350
rosa_chinensis	RchiOBHm_Chr6g0306861
rosa_laevigata	RLG00000010760
rosa_multiflora	Rmu_sc0009381.1_g000005
rosa_roxburghii	Rroxscaffold_7G00161410
rosa_rugosa	Rorug06G0353600 Rorug06G0353700 Rorug06G0353800 Rorug06G0353900
rosa_samantha	Rh6AG465400 Rh6BG435400 Rh6CG479800 Rh6DG466800
rosa_wichuraiana	Rw6G040560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1723, 1734
AccII	CGCG	2 cut(s)	1060, 1775
AciI	CCGC	4 cut(s)	1060, 1402, 1773, 1775
AclI	AACGTT	1 cut(s)	812
AclWI	GGATC	3 cut(s)	427, 1046, 1148
AcsI	RAATTY	4 cut(s)	718, 1146, 1355, 1447
AcuI	CTGAAG	2 cut(s)	485, 1407
AcvI	CACGTG	1 cut(s)	201
AfaI	GTAC	2 cut(s)	197, 837
AfiI	CCNNNNNNNGG	3 cut(s)	336, 1061, 1587
AflII	CTTAAG	1 cut(s)	844
AflIII	ACRYGT	2 cut(s)	198, 200
AgsI	TTSAA	5 cut(s)	90, 190, 548, 1447, 1627
AhdI	GACNNNNNGTC	1 cut(s)	1664
AjnI	CCWGG	2 cut(s)	918, 1020
AjuI	GAANNNNNNNTTGG	4 cut(s)	34, 66, 1451, 1483
AluBI	AGCT	9 cut(s)	82, 321, 360, 461, 510, 866, 928, 1340, 1585
AluI	AGCT	9 cut(s)	82, 321, 360, 461, 510, 866, 928, 1340, 1585
Alw21I	GWGCWC	2 cut(s)	463, 1637
Alw26I	GTCTC	3 cut(s)	161, 386, 1031
AlwI	GGATC	3 cut(s)	427, 1046, 1148
Ama87I	CYCGRG	1 cut(s)	505
ApeKI	GCWGC	5 cut(s)	863, 886, 1006, 1209, 1711
ApoI	RAATTY	4 cut(s)	718, 1146, 1355, 1447
AspS9I	GGNCC	1 cut(s)	945
AsuHPI	GGTGA	2 cut(s)	793, 1790
AsuNHI	GCTAGC	1 cut(s)	1283
AvaI	CYCGRG	1 cut(s)	505
AvaII	GGWCC	1 cut(s)	945
BaeGI	GKGCMC	1 cut(s)	318
BanI	GGYRCC	2 cut(s)	1723, 1734
BanII	GRGCYC	2 cut(s)	116, 463
BbrPI	CACGTG	1 cut(s)	201
BbsI	GAAGAC	2 cut(s)	739, 1660
Bbv12I	GWGCWC	2 cut(s)	463, 1637
BbvCI	CCTCAGC	1 cut(s)	1586
BbvI	GCAGC	5 cut(s)	873, 875, 993, 1221, 1723
BccI	CCATC	3 cut(s)	214, 227, 553
BciT130I	CCWGG	2 cut(s)	920, 1022
BciVI	GTATCC	2 cut(s)	1173, 1545
BclI	TGATCA	1 cut(s)	307
BcoDI	GTCTC	3 cut(s)	161, 386, 1031
BfaI	CTAG	4 cut(s)	723, 867, 1284, 1452
BfmI	CTRYAG	2 cut(s)	973, 1007
BfrI	CTTAAG	1 cut(s)	844
BfuI	GTATCC	2 cut(s)	1173, 1545
BglI	GCCNNNNNGGC	1 cut(s)	1732
BisI	GCNGC	6 cut(s)	864, 887, 1007, 1210, 1403, 1712
BlpI	GCTNAGC	1 cut(s)	1336
BlsI	GCNGC	6 cut(s)	865, 888, 1008, 1211, 1404, 1713
Bme1390I	CCNGG	2 cut(s)	920, 1022
Bme18I	GGWCC	1 cut(s)	945
BmeRI	GACNNNNNGTC	1 cut(s)	1664
BmeT110I	CYCGRG	1 cut(s)	505
BmgT120I	GGNCC	1 cut(s)	945
BmiI	GGNNCC	3 cut(s)	649, 1725, 1736
BmrFI	CCNGG	2 cut(s)	920, 1022
BmsI	GCATC	3 cut(s)	221, 722, 839
BmtI	GCTAGC	1 cut(s)	1287
BoxI	GACNNNNGTC	1 cut(s)	1082
BpiI	GAAGAC	2 cut(s)	739, 1660
BpmI	CTGGAG	1 cut(s)	1347
Bpu10I	CCTNAGC	1 cut(s)	1586
Bpu1102I	GCTNAGC	1 cut(s)	1336
BpuEI	CTTGAG	3 cut(s)	11, 1532, 1633
BsaAI	YACGTR	1 cut(s)	201
BsaI	GGTCTC	1 cut(s)	1031
BsaJI	CCNNGG	5 cut(s)	948, 993, 1021, 1748, 1773
BsaXI	ACNNNNNCTCC	4 cut(s)	55, 85, 765, 795
Bsc4I	CCNNNNNNNGG	3 cut(s)	336, 1061, 1587
Bse1I	ACTGG	3 cut(s)	330, 832, 1097
BseBI	CCWGG	2 cut(s)	920, 1022
BseDI	CCNNGG	5 cut(s)	948, 993, 1021, 1748, 1773
BseGI	GGATG	7 cut(s)	212, 279, 347, 573, 928, 1003, 1597
BseLI	CCNNNNNNNGG	3 cut(s)	336, 1061, 1587
BseMII	CTCAG	5 cut(s)	147, 255, 1286, 1350, 1577
BseNI	ACTGG	3 cut(s)	330, 832, 1097
BseRI	GAGGAG	3 cut(s)	404, 1529, 1759
BseSI	GKGCMC	1 cut(s)	318
BseXI	GCAGC	5 cut(s)	873, 875, 993, 1221, 1723
BseYI	CCCAGC	2 cut(s)	852, 1340
BsgI	GTGCAG	2 cut(s)	354, 1059
Bsh1236I	CGCG	2 cut(s)	1060, 1775
BshNI	GGYRCC	2 cut(s)	1723, 1734
BsiHKAI	GWGCWC	2 cut(s)	463, 1637
BsiHKCI	CYCGRG	1 cut(s)	505
BslFI	GGGAC	1 cut(s)	1357
BslI	CCNNNNNNNGG	3 cut(s)	336, 1061, 1587
BsmAI	GTCTC	3 cut(s)	161, 386, 1031
BsmFI	GGGAC	1 cut(s)	1357
BsmI	GAATGC	2 cut(s)	1337, 1576
Bso31I	GGTCTC	1 cut(s)	1031
BsoBI	CYCGRG	1 cut(s)	505
Bsp1286I	GDGCHC	4 cut(s)	116, 318, 463, 1637
Bsp1407I	TGTACA	1 cut(s)	195
Bsp143I	GATC	8 cut(s)	307, 432, 783, 1051, 1140, 1277, 1315, 1429
Bsp1720I	GCTNAGC	1 cut(s)	1336
BspACI	CCGC	4 cut(s)	1060, 1402, 1773, 1775
BspCNI	CTCAG	5 cut(s)	148, 254, 1287, 1349, 1578
BspFNI	CGCG	2 cut(s)	1060, 1775
BspHI	TCATGA	1 cut(s)	1426
BspLI	GGNNCC	3 cut(s)	649, 1725, 1736
BspMAI	CTGCAG	1 cut(s)	1011
BspOI	GCTAGC	1 cut(s)	1287
BspPI	GGATC	3 cut(s)	427, 1046, 1148
BspQI	GCTCTTC	2 cut(s)	543, 703
BspT107I	GGYRCC	2 cut(s)	1723, 1734
BspTI	CTTAAG	1 cut(s)	844
BspTNI	GGTCTC	1 cut(s)	1031
BsrGI	TGTACA	1 cut(s)	195
BsrI	ACTGG	3 cut(s)	330, 832, 1097
BssECI	CCNNGG	5 cut(s)	948, 993, 1021, 1748, 1773
BssMI	GATC	8 cut(s)	307, 432, 783, 1051, 1140, 1277, 1315, 1429
BssT1I	CCWWGG	3 cut(s)	948, 993, 1748
Bst2UI	CCWGG	2 cut(s)	920, 1022
Bst4CI	ACNGT	1 cut(s)	1789
Bst6I	CTCTTC	4 cut(s)	246, 543, 703, 1748
BstAFI	CTTAAG	1 cut(s)	844
BstAPI	GCANNNNNTGC	1 cut(s)	1130
BstAUI	TGTACA	1 cut(s)	195
BstBAI	YACGTR	1 cut(s)	201
BstC8I	GCNNGC	4 cut(s)	1011, 1122, 1285, 1733
BstDEI	CTNAG	7 cut(s)	156, 226, 241, 1160, 1295, 1336, 1586
BstDSI	CCRYGG	1 cut(s)	1773
BstF5I	GGATG	7 cut(s)	212, 279, 347, 573, 928, 1003, 1597
BstFNI	CGCG	2 cut(s)	1060, 1775
BstKTI	GATC	8 cut(s)	310, 435, 786, 1054, 1143, 1280, 1318, 1432
BstMAI	GTCTC	3 cut(s)	161, 386, 1031
BstMBI	GATC	8 cut(s)	307, 432, 783, 1051, 1140, 1277, 1315, 1429
BstMWI	GCNNNNNNNGC	6 cut(s)	111, 863, 1130, 1196, 1732, 1781
BstNI	CCWGG	2 cut(s)	920, 1022
BstNSI	RCATGY	1 cut(s)	1133
BstPAI	GACNNNNGTC	1 cut(s)	1082
BstSCI	CCNGG	2 cut(s)	918, 1020
BstSFI	CTRYAG	2 cut(s)	973, 1007
BstSLI	GKGCMC	1 cut(s)	318
BstUI	CGCG	2 cut(s)	1060, 1775
BstV1I	GCAGC	5 cut(s)	873, 875, 993, 1221, 1723
BstV2I	GAAGAC	2 cut(s)	739, 1660
BstX2I	RGATCY	1 cut(s)	432
BstYI	RGATCY	1 cut(s)	432
BsuI	GTATCC	2 cut(s)	1173, 1545
BtgI	CCRYGG	1 cut(s)	1773
BtsCI	GGATG	7 cut(s)	212, 279, 347, 573, 928, 1003, 1597
BtsI	GCAGTG	1 cut(s)	1637
BtsIMutI	CAGTG	2 cut(s)	337, 1637
Cac8I	GCNNGC	4 cut(s)	1011, 1122, 1285, 1733
CciI	TCATGA	1 cut(s)	1426
Cfr13I	GGNCC	1 cut(s)	945
Cfr42I	CCGCGG	1 cut(s)	1776
Csp6I	GTAC	2 cut(s)	196, 836
CviAII	CATG	7 cut(s)	298, 1130, 1216, 1399, 1411, 1427, 1535
CviQI	GTAC	2 cut(s)	196, 836
DdeI	CTNAG	7 cut(s)	156, 226, 241, 1160, 1295, 1336, 1586
DpnI	GATC	8 cut(s)	309, 434, 785, 1053, 1142, 1279, 1317, 1431
DpnII	GATC	8 cut(s)	307, 432, 783, 1051, 1140, 1277, 1315, 1429
DraI	TTTAAA	2 cut(s)	660, 682
DriI	GACNNNNNGTC	1 cut(s)	1664
Eam1104I	CTCTTC	4 cut(s)	246, 543, 703, 1748
Eam1105I	GACNNNNNGTC	1 cut(s)	1664
EarI	CTCTTC	4 cut(s)	246, 543, 703, 1748
Ecl136II	GAGCTC	1 cut(s)	461
Eco130I	CCWWGG	3 cut(s)	948, 993, 1748
Eco24I	GRGCYC	2 cut(s)	116, 463
Eco31I	GGTCTC	1 cut(s)	1031
Eco47I	GGWCC	1 cut(s)	945
Eco53kI	GAGCTC	1 cut(s)	461
Eco57I	CTGAAG	2 cut(s)	485, 1407
Eco72I	CACGTG	1 cut(s)	201
Eco88I	CYCGRG	1 cut(s)	505
EcoICRI	GAGCTC	1 cut(s)	461
EcoRI	GAATTC	2 cut(s)	718, 1447
EcoRII	CCWGG	2 cut(s)	918, 1020
EcoT14I	CCWWGG	3 cut(s)	948, 993, 1748
EcoT38I	GRGCYC	2 cut(s)	116, 463
ErhI	CCWWGG	3 cut(s)	948, 993, 1748
FaeI	CATG	7 cut(s)	301, 1133, 1219, 1402, 1414, 1430, 1538
FaqI	GGGAC	1 cut(s)	1357
FatI	CATG	7 cut(s)	297, 1129, 1215, 1398, 1410, 1426, 1534
FauI	CCCGC	2 cut(s)	1053, 1768
FbaI	TGATCA	1 cut(s)	307
Fnu4HI	GCNGC	6 cut(s)	864, 887, 1007, 1210, 1403, 1712
FokI	GGATG	7 cut(s)	199, 286, 334, 580, 935, 1010, 1604
FriOI	GRGCYC	2 cut(s)	116, 463
Fsp4HI	GCNGC	6 cut(s)	864, 887, 1007, 1210, 1403, 1712
FspBI	CTAG	4 cut(s)	723, 867, 1284, 1452
GluI	GCNGC	6 cut(s)	864, 887, 1007, 1210, 1403, 1712
GsaI	CCCAGC	2 cut(s)	856, 1344
GsuI	CTGGAG	1 cut(s)	1347
Hin1II	CATG	7 cut(s)	301, 1133, 1219, 1402, 1414, 1430, 1538
HindIII	AAGCTT	1 cut(s)	80
HinfI	GANTC	5 cut(s)	182, 404, 629, 1071, 1381
HphI	GGTGA	2 cut(s)	793, 1790
Hpy166II	GTNNAC	2 cut(s)	196, 198
Hpy188III	TCNNGA	8 cut(s)	489, 723, 1075, 1113, 1364, 1385, 1427, 1452
Hpy8I	GTNNAC	2 cut(s)	196, 198
Hpy99I	CGWCG	1 cut(s)	1723
HpyCH4III	ACNGT	1 cut(s)	1789
HpyCH4IV	ACGT	3 cut(s)	200, 812, 1346
HpyF10VI	GCNNNNNNNGC	6 cut(s)	111, 863, 1130, 1196, 1732, 1781
HpyF3I	CTNAG	7 cut(s)	156, 226, 241, 1160, 1295, 1336, 1586
HpySE526I	ACGT	3 cut(s)	200, 812, 1346
Hsp92II	CATG	7 cut(s)	301, 1133, 1219, 1402, 1414, 1430, 1538
Ksp22I	TGATCA	1 cut(s)	307
KspI	CCGCGG	1 cut(s)	1776
Kzo9I	GATC	8 cut(s)	307, 432, 783, 1051, 1140, 1277, 1315, 1429
LguI	GCTCTTC	2 cut(s)	543, 703
LmnI	GCTCC	2 cut(s)	458, 936
Lsp1109I	GCAGC	5 cut(s)	873, 875, 993, 1221, 1723
LweI	GCATC	3 cut(s)	221, 722, 839
MaeI	CTAG	4 cut(s)	723, 867, 1284, 1452
MaeII	ACGT	3 cut(s)	200, 812, 1346
MaeIII	GTNAC	7 cut(s)	236, 363, 1064, 1506, 1652, 1753, 1778
MalI	GATC	8 cut(s)	309, 434, 785, 1053, 1142, 1279, 1317, 1431
MboI	GATC	8 cut(s)	307, 432, 783, 1051, 1140, 1277, 1315, 1429
MfeI	CAATTG	1 cut(s)	896
MflI	RGATCY	1 cut(s)	432
MhlI	GDGCHC	4 cut(s)	116, 318, 463, 1637
MlyI	GAGTC	1 cut(s)	1390
MmeI	TCCRAC	3 cut(s)	402, 751, 795
MspA1I	CMGCKG	2 cut(s)	1340, 1775
MspCI	CTTAAG	1 cut(s)	844
MspR9I	CCNGG	2 cut(s)	920, 1022
MunI	CAATTG	1 cut(s)	896
Mva1269I	GAATGC	2 cut(s)	1337, 1576
MvaI	CCWGG	2 cut(s)	920, 1022
MvnI	CGCG	2 cut(s)	1060, 1775
MwoI	GCNNNNNNNGC	6 cut(s)	111, 863, 1130, 1196, 1732, 1781
NdeII	GATC	8 cut(s)	307, 432, 783, 1051, 1140, 1277, 1315, 1429
NheI	GCTAGC	1 cut(s)	1283
NlaIII	CATG	7 cut(s)	301, 1133, 1219, 1402, 1414, 1430, 1538
NlaIV	GGNNCC	3 cut(s)	649, 1725, 1736
NmuCI	GTSAC	4 cut(s)	1506, 1652, 1753, 1778
NspI	RCATGY	1 cut(s)	1133
PaeR7I	CTCGAG	1 cut(s)	505
PagI	TCATGA	1 cut(s)	1426
PciSI	GCTCTTC	2 cut(s)	543, 703
PctI	GAATGC	2 cut(s)	1337, 1576
PfeI	GAWTC	4 cut(s)	182, 404, 629, 1071
PkrI	GCNGC	6 cut(s)	865, 888, 1008, 1211, 1404, 1713
PleI	GAGTC	1 cut(s)	1389
PmaCI	CACGTG	1 cut(s)	201
PmlI	CACGTG	1 cut(s)	201
PpsI	GAGTC	1 cut(s)	1389
Ppu21I	YACGTR	1 cut(s)	201
PshAI	GACNNNNGTC	1 cut(s)	1082
Psp124BI	GAGCTC	1 cut(s)	463
Psp1406I	AACGTT	1 cut(s)	812
Psp6I	CCWGG	2 cut(s)	918, 1020
PspCI	CACGTG	1 cut(s)	201
PspFI	CCCAGC	2 cut(s)	852, 1340
PspGI	CCWGG	2 cut(s)	918, 1020
PspN4I	GGNNCC	3 cut(s)	649, 1725, 1736
PspPI	GGNCC	1 cut(s)	945
PspXI	VCTCGAGB	1 cut(s)	505
PstI	CTGCAG	1 cut(s)	1011
PsuI	RGATCY	1 cut(s)	432
PvuII	CAGCTG	1 cut(s)	1340
RsaI	GTAC	2 cut(s)	197, 837
RsaNI	GTAC	2 cut(s)	196, 836
SacI	GAGCTC	1 cut(s)	463
SacII	CCGCGG	1 cut(s)	1776
SapI	GCTCTTC	2 cut(s)	543, 703
SatI	GCNGC	6 cut(s)	864, 887, 1007, 1210, 1403, 1712
Sau3AI	GATC	8 cut(s)	307, 432, 783, 1051, 1140, 1277, 1315, 1429
Sau96I	GGNCC	1 cut(s)	945
SchI	GAGTC	1 cut(s)	1390
ScrFI	CCNGG	2 cut(s)	920, 1022
SduI	GDGCHC	4 cut(s)	116, 318, 463, 1637
SfaNI	GCATC	3 cut(s)	221, 722, 839
SfcI	CTRYAG	2 cut(s)	973, 1007
Sfr274I	CTCGAG	1 cut(s)	505
Sfr303I	CCGCGG	1 cut(s)	1776
SgrBI	CCGCGG	1 cut(s)	1776
SinI	GGWCC	1 cut(s)	945
SlaI	CTCGAG	1 cut(s)	505
SmlI	CTYRAG	5 cut(s)	26, 505, 844, 1511, 1612
SmoI	CTYRAG	5 cut(s)	26, 505, 844, 1511, 1612
SsiI	CCGC	4 cut(s)	1060, 1402, 1773, 1775
SspI	AATATT	1 cut(s)	574
SspMI	CTAG	4 cut(s)	723, 867, 1284, 1452
SstI	GAGCTC	1 cut(s)	463
StyD4I	CCNGG	2 cut(s)	918, 1020
StyI	CCWWGG	3 cut(s)	948, 993, 1748
TaaI	ACNGT	1 cut(s)	1789
TaiI	ACGT	3 cut(s)	203, 815, 1349
TaqI	TCGA	7 cut(s)	488, 506, 716, 730, 967, 1076, 1192
TaqII	GACCGA	1 cut(s)	933
TatI	WGTACW	1 cut(s)	195
TauI	GCSGC	1 cut(s)	1405
TfiI	GAWTC	4 cut(s)	182, 404, 629, 1071
TscAI	CASTG	2 cut(s)	337, 1637
TseFI	GTSAC	4 cut(s)	1506, 1652, 1753, 1778
TseI	GCWGC	5 cut(s)	863, 886, 1006, 1209, 1711
Tsp45I	GTSAC	4 cut(s)	1506, 1652, 1753, 1778
TspGWI	ACGGA	2 cut(s)	569, 1707
TspRI	CASTG	2 cut(s)	337, 1637
Vha464I	CTTAAG	1 cut(s)	844
VpaK11BI	GGWCC	1 cut(s)	945
XapI	RAATTY	4 cut(s)	718, 1146, 1355, 1447
XbaI	TCTAGA	2 cut(s)	722, 1451
XceI	RCATGY	1 cut(s)	1133
XhoI	CTCGAG	1 cut(s)	505
XspI	CTAG	4 cut(s)	723, 867, 1284, 1452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.