Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0007140

Physical Location & Seq

Genomic Coordinates Forward (+)

50206262 .. 50209383

Gene Structure 3122 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0353600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGCCTGAACTTTCCAGCACAATTGGGCGGGAAACATGTGGAAGCTACTTGATTTTCGAGAGCGAAACTGCCCTCGGGAGTGGTGTCCGGGCATTCTTATATGTTCTTGGTCTTGCTTACTGTTTCCTTGGATTATCAGCAATTACTGCTCGTTTTTTCCGGTCCATGGAGAGTGTTGTGAGCCACACGCGGAAGGTGGTGGCTATTGATCCTTACTCTGGTGATCAAGTTATTAGTCATGAGAAAGTGTGGAATTTCACAATTGCAGATATTAGCCTGCTGGCCTTTGGGACCAGCTTTCCTCAAATATCATTAGCCACCATCGATGCTATACGAAACATTGGAAGCCTCTATGCTGGGGGTTTGGGTCCTGGAACACTAGTTGGTTCTGCTGCATTCGACCTTTTCCCCATCCATGCTGTTTGTGTTGTAGTTCCTAAAGCTGGAGAGCTGAAAAAGATTGCTGATATAGGAGTCTGGCTGGTTGAGCTCTTTTGGTCTTTCTGGGCATATATTTGGTTATATATAATTCTAGAGGTGTGGACACCAAACGTGATTACACTATGGGAGGCCTTATTGACAGTACTACAATACGGGTTACTGCTGATACATGCTTATGCTCAGGACAAGCAGTGGCCCTACTTTTCTCTTCCTTTGCCAAGAAGCAAGAGACCAGAGGACTGGGTGCCAGCTGAGCCTGTTGCATGCAAGCTTGATAGTGGTCCCTGTGATGAGTATTCTGAAATACTTCATGTTGGCGAAGATGAAAACAGAGGCGTTGTTGATATTTTCTCCATACATTCAGAGACAGGAAATGGTATAGTTCCAGTGTATCAAAAAGTCTCTGGAAATGACGAAACTCCTGAGTCATCTAATAAAGATTGTCAAGAGAAAATGGTTTCAGAAGATCATCCAGTTTTTATACTTTGGAGGCAACAATTTGTAGACGCAGTCAAGCTCGAAAGCACAGAATCAAGAAAACTGAACAACTTCTATTTGCGACTGGCAAGAATTTTCTGGCAATTACTTCTTGCTCCCTGGAGACTATTATTTGCATTTGTTCCTCCTTATAACATTGCTCATGGCTGGGTTGCCTTCATTTGTTCCTTAATTTTCATCAGTGCGATAGCTTACATTGTAACACAACTCACTGATCTCATAAGTTGTGTCACAGGAATAAATCCTTATGTCATAGCATTTACCGCATTAGCAAGTGGAACTTCGTGGCCAGATTTAGTTGCAAGTAAGATTGCTGCTGAACGTCAGTTGACAGCTGACTCTGCCATTGCAAACATCACTTGCAGCAATTCGGTGAATATATATGTTGGAATCGGTTTTCCATGGCTGATCAACACAGCATACAATTATTTTGTATATAAAGAACCACTGCGGATTGAGAATGCAGCGGGTCTTAGCTTCTCATTGCTTGTATTTTTCGCAACCTCAGTAGGCTGCATTTCAGTTCTGGTAATTAGGCGTCTAACATTGGGTGCAGAGCTTGGAGGGCCAAAGCTTTGGGCATGGATTACCTTTGTGTTTTTCATGTTGCTTTGGATAATTTTTGTTGTGCTGTCTTCTCTCAAAGTTTCTGGCATCATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000988 GO:0000990 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0016987 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0097747 GO:0104004 GO:0140098 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2000142 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sigma70_r2 Sigma70_r3 Sigma70_r4

Protein Analysis

533

Amino Acids

59.24

Weight (kDa)

5.3

Isoelectric Point (pI)

35.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_Ca_ex	PF01699	34 - 206	1.5e-15	Sodium/calcium exchanger protein
Na_Ca_ex	PF01699	361 - 525	1.1e-23	Sodium/calcium exchanger protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53920 AT3G53920
fragaria_vesca	FvH4_2g35110 FvH4_2g35110 FvH4_2g35110
malus_domestica	MD08G1108600.v1.1 MD15G1089100.v1.1
prunus_persica	Prupe.1G443200_v2.0.a1 Prupe.1G443200_v2.0.a1 Prupe.1G443200_v2.0.a1
pyrus_communis	pycom08g09050 pycom15g08350
rosa_chinensis	RchiOBHm_Chr6g0306861
rosa_laevigata	RLG00000010760
rosa_multiflora	Rmu_sc0009381.1_g000005
rosa_roxburghii	Rroxscaffold_7G00161410
rosa_rugosa	Rorug06G0353600 Rorug06G0353700 Rorug06G0353800 Rorug06G0353900
rosa_samantha	Rh6AG465400 Rh6BG435400 Rh6CG479800 Rh6DG466800
rosa_wichuraiana	Rw6G040560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1071
AccB1I	GGYRCC	1 cut(s)	685
AccI	GTMKAC	1 cut(s)	945
AccII	CGCG	1 cut(s)	190
AciI	CCGC	5 cut(s)	28, 190, 1203, 1390, 1406
AclWI	GGATC	1 cut(s)	203
AcoI	YGGCCR	1 cut(s)	1226
AcsI	RAATTY	2 cut(s)	253, 1011
AcyI	GRCGYC	1 cut(s)	1477
AfaI	GTAC	1 cut(s)	585
AfiI	CCNNNNNNNGG	3 cut(s)	166, 218, 443
AflIII	ACRYGT	1 cut(s)	35
AhlI	ACTAGT	1 cut(s)	379
AjnI	CCWGG	2 cut(s)	370, 1037
Alw21I	GWGCWC	1 cut(s)	492
Alw26I	GTCTC	4 cut(s)	664, 800, 847, 1036
AlwI	GGATC	1 cut(s)	203
Ama87I	CYCGRG	1 cut(s)	74
AoxI	GGCC	5 cut(s)	282, 570, 635, 1226, 1505
ApeKI	GCWGC	5 cut(s)	392, 1253, 1302, 1403, 1452
ApoI	RAATTY	2 cut(s)	253, 1011
Asp700I	GAANNNNTTC	2 cut(s)	747, 989
AspS9I	GGNCC	6 cut(s)	162, 291, 368, 636, 722, 1505
AsuC2I	CCSGG	1 cut(s)	89
AsuHPI	GGTGA	2 cut(s)	233, 1324
AvaI	CYCGRG	1 cut(s)	74
AvaII	GGWCC	4 cut(s)	162, 291, 368, 722
BalI	TGGCCA	1 cut(s)	1228
BanI	GGYRCC	1 cut(s)	685
BanII	GRGCYC	1 cut(s)	492
BbsI	GAAGAC	1 cut(s)	1566
Bbv12I	GWGCWC	1 cut(s)	492
BbvI	GCAGC	5 cut(s)	379, 1240, 1314, 1415, 1439
BccI	CCATC	2 cut(s)	329, 419
BciT130I	CCWGG	2 cut(s)	372, 1039
BclI	TGATCA	2 cut(s)	223, 1347
BcnI	CCSGG	1 cut(s)	89
BcoDI	GTCTC	4 cut(s)	664, 800, 847, 1036
BcuI	ACTAGT	1 cut(s)	379
BfaI	CTAG	2 cut(s)	380, 533
BisI	GCNGC	5 cut(s)	393, 1254, 1303, 1404, 1453
BlpI	GCTNAGC	1 cut(s)	693
BlsI	GCNGC	5 cut(s)	394, 1255, 1304, 1405, 1454
BmcAI	AGTACT	1 cut(s)	585
Bme1390I	CCNGG	3 cut(s)	89, 372, 1039
Bme18I	GGWCC	4 cut(s)	162, 291, 368, 722
BmeT110I	CYCGRG	1 cut(s)	74
BmgT120I	GGNCC	6 cut(s)	162, 291, 368, 636, 722, 1505
BmiI	GGNNCC	4 cut(s)	292, 369, 687, 724
BmrFI	CCNGG	3 cut(s)	89, 372, 1039
BmrI	ACTGGG	1 cut(s)	691
BmsI	GCATC	1 cut(s)	316
BmuI	ACTGGG	1 cut(s)	691
BpiI	GAAGAC	1 cut(s)	1566
BpmI	CTGGAG	2 cut(s)	465, 1060
Bpu10I	CCTNAGC	1 cut(s)	621
Bpu1102I	GCTNAGC	1 cut(s)	693
BpuMI	CCSGG	1 cut(s)	89
Bsa29I	ATCGAT	1 cut(s)	324
BsaHI	GRCGYC	1 cut(s)	1477
BsaI	GGTCTC	1 cut(s)	664
BsaJI	CCNNGG	5 cut(s)	73, 127, 165, 1037, 1340
BsaWI	WCCGGW	1 cut(s)	159
Bsc4I	CCNNNNNNNGG	3 cut(s)	166, 218, 443
Bse1I	ACTGG	4 cut(s)	686, 827, 914, 1008
Bse3DI	GCAATG	3 cut(s)	1074, 1284, 1421
BseBI	CCWGG	2 cut(s)	372, 1039
BseCI	ATCGAT	1 cut(s)	324
BseDI	CCNNGG	5 cut(s)	73, 127, 165, 1037, 1340
BseGI	GGATG	2 cut(s)	411, 910
BseLI	CCNNNNNNNGG	3 cut(s)	166, 218, 443
BseMI	GCAATG	3 cut(s)	1074, 1284, 1421
BseMII	CTCAG	4 cut(s)	635, 684, 855, 1458
BseNI	ACTGG	4 cut(s)	686, 827, 914, 1008
BseXI	GCAGC	5 cut(s)	379, 1240, 1314, 1415, 1439
BseYI	CCCAGC	2 cut(s)	356, 1086
BsgI	GTGCAG	1 cut(s)	1512
Bsh1236I	CGCG	1 cut(s)	190
BshFI	GGCC	5 cut(s)	284, 572, 637, 1228, 1507
BshNI	GGYRCC	1 cut(s)	685
BshVI	ATCGAT	1 cut(s)	324
BsiHKAI	GWGCWC	1 cut(s)	492
BsiHKCI	CYCGRG	1 cut(s)	74
BsiSI	CCGG	2 cut(s)	88, 160
BslFI	GGGAC	2 cut(s)	304, 708
BslI	CCNNNNNNNGG	3 cut(s)	166, 218, 443
BsmAI	GTCTC	4 cut(s)	664, 800, 847, 1036
BsmFI	GGGAC	2 cut(s)	304, 708
BsmI	GAATGC	3 cut(s)	92, 395, 1405
BsnI	GGCC	5 cut(s)	284, 572, 637, 1228, 1507
Bso31I	GGTCTC	1 cut(s)	664
BsoBI	CYCGRG	1 cut(s)	74
Bsp1286I	GDGCHC	1 cut(s)	492
Bsp143I	GATC	5 cut(s)	208, 223, 907, 1153, 1347
Bsp1720I	GCTNAGC	1 cut(s)	693
Bsp19I	CCATGG	2 cut(s)	165, 1340
BspACI	CCGC	5 cut(s)	28, 190, 1203, 1390, 1406
BspANI	GGCC	5 cut(s)	284, 572, 637, 1228, 1507
BspCNI	CTCAG	4 cut(s)	634, 685, 856, 1457
BspDI	ATCGAT	1 cut(s)	324
BspFNI	CGCG	1 cut(s)	190
BspHI	TCATGA	1 cut(s)	238
BspLI	GGNNCC	4 cut(s)	292, 369, 687, 724
BspPI	GGATC	1 cut(s)	203
BspT107I	GGYRCC	1 cut(s)	685
BspTNI	GGTCTC	1 cut(s)	664
BsrDI	GCAATG	3 cut(s)	1074, 1284, 1421
BsrI	ACTGG	4 cut(s)	686, 827, 914, 1008
BssECI	CCNNGG	5 cut(s)	73, 127, 165, 1037, 1340
BssMI	GATC	5 cut(s)	208, 223, 907, 1153, 1347
BssNI	GRCGYC	1 cut(s)	1477
BssT1I	CCWWGG	3 cut(s)	127, 165, 1340
Bst2UI	CCWGG	2 cut(s)	372, 1039
Bst4CI	ACNGT	2 cut(s)	122, 583
Bst6I	CTCTTC	1 cut(s)	654
BstACI	GRCGYC	1 cut(s)	1477
BstAPI	GCANNNNNTGC	1 cut(s)	146
BstC8I	GCNNGC	5 cut(s)	278, 282, 690, 706, 710
BstDEI	CTNAG	5 cut(s)	621, 693, 864, 1412, 1444
BstDSI	CCRYGG	2 cut(s)	165, 1340
BstF5I	GGATG	2 cut(s)	411, 910
BstFNI	CGCG	1 cut(s)	190
BstKTI	GATC	5 cut(s)	211, 226, 910, 1156, 1350
BstMAI	GTCTC	4 cut(s)	664, 800, 847, 1036
BstMBI	GATC	5 cut(s)	208, 223, 907, 1153, 1347
BstMWI	GCNNNNNNNGC	6 cut(s)	146, 487, 694, 1202, 1280, 1504
BstNI	CCWGG	2 cut(s)	372, 1039
BstNSI	RCATGY	3 cut(s)	39, 614, 708
BstSCI	CCNGG	3 cut(s)	87, 370, 1037
BstUI	CGCG	1 cut(s)	190
BstV1I	GCAGC	5 cut(s)	379, 1240, 1314, 1415, 1439
BstV2I	GAAGAC	1 cut(s)	1566
BstXI	CCANNNNNNTGG	2 cut(s)	681, 1515
Bsu15I	ATCGAT	1 cut(s)	324
BsuRI	GGCC	5 cut(s)	284, 572, 637, 1228, 1507
BsuTUI	ATCGAT	1 cut(s)	324
BtgI	CCRYGG	2 cut(s)	165, 1340
BtsCI	GGATG	2 cut(s)	411, 910
BtsI	GCAGTG	2 cut(s)	638, 1385
BtsIMutI	CAGTG	5 cut(s)	638, 834, 1126, 1149, 1385
Cac8I	GCNNGC	5 cut(s)	278, 282, 690, 706, 710
CciI	TCATGA	1 cut(s)	238
Cfr13I	GGNCC	6 cut(s)	162, 291, 368, 636, 722, 1505
ClaI	ATCGAT	1 cut(s)	324
CseI	GACGC	2 cut(s)	956, 1466
Csp6I	GTAC	1 cut(s)	584
CviQI	GTAC	1 cut(s)	584
DdeI	CTNAG	5 cut(s)	621, 693, 864, 1412, 1444
DpnI	GATC	5 cut(s)	210, 225, 909, 1155, 1349
DpnII	GATC	5 cut(s)	208, 223, 907, 1153, 1347
EaeI	YGGCCR	1 cut(s)	1226
Eam1104I	CTCTTC	1 cut(s)	654
EarI	CTCTTC	1 cut(s)	654
Ecl136II	GAGCTC	1 cut(s)	490
Eco130I	CCWWGG	3 cut(s)	127, 165, 1340
Eco147I	AGGCCT	1 cut(s)	572
Eco24I	GRGCYC	1 cut(s)	492
Eco31I	GGTCTC	1 cut(s)	664
Eco47I	GGWCC	4 cut(s)	162, 291, 368, 722
Eco53kI	GAGCTC	1 cut(s)	490
Eco88I	CYCGRG	1 cut(s)	74
EcoICRI	GAGCTC	1 cut(s)	490
EcoO109I	RGGNCCY	1 cut(s)	368
EcoRII	CCWGG	2 cut(s)	370, 1037
EcoT14I	CCWWGG	3 cut(s)	127, 165, 1340
EcoT38I	GRGCYC	1 cut(s)	492
ErhI	CCWWGG	3 cut(s)	127, 165, 1340
FalI	AAGNNNNNCTT	2 cut(s)	1204, 1236
FaqI	GGGAC	2 cut(s)	304, 708
FauI	CCCGC	2 cut(s)	21, 1399
FbaI	TGATCA	2 cut(s)	223, 1347
FblI	GTMKAC	1 cut(s)	945
Fnu4HI	GCNGC	5 cut(s)	393, 1254, 1303, 1404, 1453
FokI	GGATG	2 cut(s)	398, 897
FriOI	GRGCYC	1 cut(s)	492
Fsp4HI	GCNGC	5 cut(s)	393, 1254, 1303, 1404, 1453
FspBI	CTAG	2 cut(s)	380, 533
GluI	GCNGC	5 cut(s)	393, 1254, 1303, 1404, 1453
GsaI	CCCAGC	2 cut(s)	360, 1090
GsuI	CTGGAG	2 cut(s)	465, 1060
HaeIII	GGCC	5 cut(s)	284, 572, 637, 1228, 1507
HapII	CCGG	2 cut(s)	88, 160
HgaI	GACGC	2 cut(s)	956, 1466
Hin1I	GRCGYC	1 cut(s)	1477
HincII	GTYRAC	1 cut(s)	1269
HindII	GTYRAC	1 cut(s)	1269
HindIII	AAGCTT	2 cut(s)	710, 1511
HinfI	GANTC	5 cut(s)	474, 866, 971, 1277, 1329
HpaII	CCGG	2 cut(s)	88, 160
HphI	GGTGA	2 cut(s)	233, 1324
Hpy166II	GTNNAC	3 cut(s)	543, 946, 1269
Hpy188I	TCNGA	3 cut(s)	742, 805, 904
Hpy188III	TCNNGA	9 cut(s)	58, 76, 239, 533, 623, 846, 863, 887, 975
Hpy8I	GTNNAC	3 cut(s)	543, 946, 1269
HpyAV	CCTTC	2 cut(s)	187, 1105
HpyCH4III	ACNGT	2 cut(s)	122, 583
HpyCH4IV	ACGT	2 cut(s)	552, 1261
HpyF10VI	GCNNNNNNNGC	6 cut(s)	146, 487, 694, 1202, 1280, 1504
HpyF3I	CTNAG	5 cut(s)	621, 693, 864, 1412, 1444
HpySE526I	ACGT	2 cut(s)	552, 1261
Hsp92I	GRCGYC	1 cut(s)	1477
Ksp22I	TGATCA	2 cut(s)	223, 1347
Kzo9I	GATC	5 cut(s)	208, 223, 907, 1153, 1347
LmnI	GCTCC	1 cut(s)	1039
Lsp1109I	GCAGC	5 cut(s)	379, 1240, 1314, 1415, 1439
LweI	GCATC	1 cut(s)	316
MaeI	CTAG	2 cut(s)	380, 533
MaeII	ACGT	2 cut(s)	552, 1261
MaeIII	GTNAC	3 cut(s)	597, 1138, 1168
MalI	GATC	5 cut(s)	210, 225, 909, 1155, 1349
MboI	GATC	5 cut(s)	208, 223, 907, 1153, 1347
MboII	GAAGA	4 cut(s)	641, 773, 917, 1566
MfeI	CAATTG	2 cut(s)	21, 261
MhlI	GDGCHC	1 cut(s)	492
MlsI	TGGCCA	1 cut(s)	1228
MluNI	TGGCCA	1 cut(s)	1228
MlyI	GAGTC	3 cut(s)	483, 875, 1271
MmeI	TCCRAC	1 cut(s)	1306
Mox20I	TGGCCA	1 cut(s)	1228
MroXI	GAANNNNTTC	2 cut(s)	747, 989
MscI	TGGCCA	1 cut(s)	1228
MseI	TTAA	1 cut(s)	1109
MslI	CAYNNNNRTG	1 cut(s)	615
Msp20I	TGGCCA	1 cut(s)	1228
MspA1I	CMGCKG	3 cut(s)	692, 1274, 1406
MspI	CCGG	2 cut(s)	88, 160
MspR9I	CCNGG	3 cut(s)	89, 372, 1039
MunI	CAATTG	2 cut(s)	21, 261
Mva1269I	GAATGC	3 cut(s)	92, 395, 1405
MvaI	CCWGG	2 cut(s)	372, 1039
MvnI	CGCG	1 cut(s)	190
MwoI	GCNNNNNNNGC	6 cut(s)	146, 487, 694, 1202, 1280, 1504
NciI	CCSGG	1 cut(s)	89
NcoI	CCATGG	2 cut(s)	165, 1340
NdeII	GATC	5 cut(s)	208, 223, 907, 1153, 1347
NlaIV	GGNNCC	4 cut(s)	292, 369, 687, 724
NmuCI	GTSAC	1 cut(s)	1168
NspI	RCATGY	3 cut(s)	39, 614, 708
PaeI	GCATGC	1 cut(s)	708
PagI	TCATGA	1 cut(s)	238
PceI	AGGCCT	1 cut(s)	572
PciI	ACATGT	1 cut(s)	35
PctI	GAATGC	3 cut(s)	92, 395, 1405
PdmI	GAANNNNTTC	2 cut(s)	747, 989
PfeI	GAWTC	2 cut(s)	971, 1329
PflFI	GACNNNGTC	1 cut(s)	950
PfoI	TCCNGGA	1 cut(s)	370
PkrI	GCNGC	5 cut(s)	394, 1255, 1304, 1405, 1454
PleI	GAGTC	3 cut(s)	482, 874, 1271
PpsI	GAGTC	3 cut(s)	482, 874, 1271
PpuMI	RGGWCCY	1 cut(s)	368
PscI	ACATGT	1 cut(s)	35
PsiI	TTATAA	1 cut(s)	1071
Psp124BI	GAGCTC	1 cut(s)	492
Psp5II	RGGWCCY	1 cut(s)	368
Psp6I	CCWGG	2 cut(s)	370, 1037
PspFI	CCCAGC	2 cut(s)	356, 1086
PspGI	CCWGG	2 cut(s)	370, 1037
PspN4I	GGNNCC	4 cut(s)	292, 369, 687, 724
PspPI	GGNCC	6 cut(s)	162, 291, 368, 636, 722, 1505
PspPPI	RGGWCCY	1 cut(s)	368
PsyI	GACNNNGTC	1 cut(s)	950
PvuII	CAGCTG	2 cut(s)	692, 1274
RsaI	GTAC	1 cut(s)	585
RsaNI	GTAC	1 cut(s)	584
RseI	CAYNNNNRTG	1 cut(s)	615
SacI	GAGCTC	1 cut(s)	492
SaqAI	TTAA	1 cut(s)	1109
SatI	GCNGC	5 cut(s)	393, 1254, 1303, 1404, 1453
Sau3AI	GATC	5 cut(s)	208, 223, 907, 1153, 1347
Sau96I	GGNCC	6 cut(s)	162, 291, 368, 636, 722, 1505
ScaI	AGTACT	1 cut(s)	585
SchI	GAGTC	3 cut(s)	483, 875, 1271
ScrFI	CCNGG	3 cut(s)	89, 372, 1039
SduI	GDGCHC	1 cut(s)	492
SfaNI	GCATC	1 cut(s)	316
SinI	GGWCC	4 cut(s)	162, 291, 368, 722
SmiMI	CAYNNNNRTG	1 cut(s)	615
SpeI	ACTAGT	1 cut(s)	379
SphI	GCATGC	1 cut(s)	708
SseBI	AGGCCT	1 cut(s)	572
SsiI	CCGC	5 cut(s)	28, 190, 1203, 1390, 1406
SspMI	CTAG	2 cut(s)	380, 533
SstI	GAGCTC	1 cut(s)	492
StuI	AGGCCT	1 cut(s)	572
StyD4I	CCNGG	3 cut(s)	87, 370, 1037
StyI	CCWWGG	3 cut(s)	127, 165, 1340
TaaI	ACNGT	2 cut(s)	122, 583
TaiI	ACGT	2 cut(s)	555, 1264
TaqI	TCGA	4 cut(s)	57, 324, 399, 960
TatI	WGTACW	1 cut(s)	583
TfiI	GAWTC	2 cut(s)	971, 1329
Tru1I	TTAA	1 cut(s)	1109
Tru9I	TTAA	1 cut(s)	1109
TscAI	CASTG	5 cut(s)	638, 834, 1126, 1156, 1392
TseFI	GTSAC	1 cut(s)	1168
TseI	GCWGC	5 cut(s)	392, 1253, 1302, 1403, 1452
Tsp45I	GTSAC	1 cut(s)	1168
TspDTI	ATGAA	5 cut(s)	740, 780, 1087, 1105, 1531
TspRI	CASTG	5 cut(s)	638, 834, 1126, 1156, 1392
Tth111I	GACNNNGTC	1 cut(s)	950
VpaK11BI	GGWCC	4 cut(s)	162, 291, 368, 722
XapI	RAATTY	2 cut(s)	253, 1011
XbaI	TCTAGA	1 cut(s)	532
XceI	RCATGY	3 cut(s)	39, 614, 708
XmiI	GTMKAC	1 cut(s)	945
XmnI	GAANNNNTTC	2 cut(s)	747, 989
XspI	CTAG	2 cut(s)	380, 533
ZrmI	AGTACT	1 cut(s)	585

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.