Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0007140

Physical Location & Seq

Genomic Coordinates Reverse (-)

50217473 .. 50220416

Gene Structure 2944 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0353900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGGACCCCAATTCCCAAATCGCAGAGAACCCAGAATCATCAGAGGAGCAACAAAACCCACTAGCCCTTCTCCTCCCTTCTTCTCCTTCTCCTTCTCCTTCTCCATTCGCCACCGCTTCACTCTCACTCTCCCTGGCCTCAATCCTCCCCACCCACTTTTTCCAACAACCCAAAGTGGCCACCCTCTTCTCCTCTCAGCCCACCAAGGCCAAAATCCCCACCCAGGCCTCCTCCCTCGCCCACCTCTCCCTCTCCGCCTCCGCCAATGTCGCCACCCCCTCCAAGCTCTCCTTCAAGTCCACCATCTCCGCCAACCCGCTCCAAAACCCCCTCACTCTCGGCCCCCGCCGCCCCCTCGACCCCAACAACGGGGCCGGAATTCGTCGAGCTTCCATCGTTTGGTTCCGCAACGACCTCCGCGTCCACGACAACGAGTGCCTCAACTCCGCCAACAACGAGTCCATGTCCGTCTTGCCCGTCTACTGCTTCGACCCGCGAGACTACGGCAAGTCGTCTTCCGGCTTCGACAAGACCGGCCCATTCCGGGCCCAGTTCCTCGTCGAGTCCGTCTCCGACCTGAGGAAGAATCTCCAGGCCAGAGGCTCTGATCTGGTCGTCAGAATCGGGAAGCCCGAGACGGTCCTCGTCGAGCTGGCCAAGACTATTGGGGCCGATGCAATCTATGCCCACAGGGAGGTTTCTCATGATGAGCTCAAGTCTGAGGAGAGGATCGAGTCTGCGATGAAGGACGAGAATGTTGAGGTTAAGTACTTCTGGGGAAGCACTTTGTACCATATGGAGGACTTGCCCTTTAAGCTGGAGGACATGCCCACGAACTATGGTGGGTTCAGAGAGAAGGTGAAGGGGTTGGAGGTGAGGAAGACCATTGAGGCTTTGGAGCAGATGAAGGGGATGCCGTCTCGCGGCGATGTGGAGCCTGGGGATGTTCCTTCCTTGATGGATTTGGGTCTCAACCCGTCTGCTTCCATGGCTCAGGATGGGAAGCCAGGTGCTGCTTCTATGGTGGGAGGAGAAGCTGAAGCCCTAGAGAGGCTTAAGAAGTTTGCAGCTGAGTGCCAAGCACAACCTCCCAAGGGGAGCAAAGAAGGAAGTCAGAATAGCATTTATGGTGCAAACTTTTCATGCAAAATCTCACCATGGCTGGCCATGGGATGCCTCTCTCCCCGCAGTATGTTTGATGAGCTAAAGAAAACTGCTAGCAGATCTGTTTCTGCATCCTCAAACCCGGATGATGGTGGCAGCGGAACAAACTGGTTAATGTTTGAGTTACTGTGGAGGGATTTCTTCAGATTTGTTACCAAGAAATACAGTGCTGGAAAGAAACAGCTTGATGCTGCTCCAGCAACAGCATGCACGGGTGCACTTGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000988 GO:0000990 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0016987 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0097747 GO:0104004 GO:0140098 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2000142 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sigma70_r2 Sigma70_r3 Sigma70_r4

Protein Analysis

463

Amino Acids

50.22

Weight (kDa)

6.37

Isoelectric Point (pI)

47.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_photolyase	PF00875	131 - 289	3.4e-44	DNA photolyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53920 AT3G53920
fragaria_vesca	FvH4_2g35110 FvH4_2g35110 FvH4_2g35110
malus_domestica	MD08G1108600.v1.1 MD15G1089100.v1.1
prunus_persica	Prupe.1G443200_v2.0.a1 Prupe.1G443200_v2.0.a1 Prupe.1G443200_v2.0.a1
pyrus_communis	pycom08g09050 pycom15g08350
rosa_chinensis	RchiOBHm_Chr6g0306861
rosa_laevigata	RLG00000010760
rosa_multiflora	Rmu_sc0009381.1_g000005
rosa_roxburghii	Rroxscaffold_7G00161410
rosa_rugosa	Rorug06G0353600 Rorug06G0353700 Rorug06G0353800 Rorug06G0353900
rosa_samantha	Rh6AG465400 Rh6BG435400 Rh6CG479800 Rh6DG466800
rosa_wichuraiana	Rw6G040560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	419
AccB7I	CCANNNNNTGG	1 cut(s)	399
AccBSI	CCGCTC	1 cut(s)	319
AccI	GTMKAC	1 cut(s)	480
AccII	CGCG	3 cut(s)	420, 496, 924
AclWI	GGATC	1 cut(s)	737
AcoI	YGGCCR	3 cut(s)	177, 654, 1164
AcsI	RAATTY	1 cut(s)	378
AcuI	CTGAAG	2 cut(s)	1059, 1291
AfaI	GTAC	2 cut(s)	770, 791
AflII	CTTAAG	1 cut(s)	1055
AgsI	TTSAA	1 cut(s)	295
AjnI	CCWGG	5 cut(s)	132, 222, 591, 937, 1006
AjuI	GAANNNNNNNTTGG	2 cut(s)	275, 307
AluBI	AGCT	9 cut(s)	286, 389, 652, 712, 817, 1037, 1070, 1204, 1348
AluI	AGCT	9 cut(s)	286, 389, 652, 712, 817, 1037, 1070, 1204, 1348
Alw21I	GWGCWC	2 cut(s)	714, 1384
Alw26I	GTCTC	5 cut(s)	492, 574, 629, 924, 974
Alw44I	GTGCAC	1 cut(s)	1380
AlwI	GGATC	1 cut(s)	737
AlwNI	CAGNNNCTG	1 cut(s)	1013
Ama87I	CYCGRG	1 cut(s)	632
ApaI	GGGCCC	1 cut(s)	550
ApaLI	GTGCAC	1 cut(s)	1380
ApeKI	GCWGC	4 cut(s)	1013, 1067, 1260, 1355
ApoI	RAATTY	1 cut(s)	378
AspS9I	GGNCC	8 cut(s)	4, 341, 372, 536, 546, 547, 640, 669
AsuC2I	CCSGG	2 cut(s)	545, 1247
AsuHPI	GGTGA	3 cut(s)	871, 886, 1146
AsuNHI	GCTAGC	1 cut(s)	1217
AvaI	CYCGRG	1 cut(s)	632
AvaII	GGWCC	2 cut(s)	4, 640
AxyI	CCTNAGG	1 cut(s)	578
BaeGI	GKGCMC	2 cut(s)	550, 1384
BalI	TGGCCA	3 cut(s)	179, 656, 1166
BanII	GRGCYC	2 cut(s)	550, 714
BbsI	GAAGAC	2 cut(s)	507, 887
Bbv12I	GWGCWC	2 cut(s)	714, 1384
BbvI	GCAGC	4 cut(s)	1000, 1079, 1272, 1342
BccI	CCATC	5 cut(s)	311, 401, 952, 992, 1247
BceAI	ACGGC	2 cut(s)	520, 901
BciT130I	CCWGG	5 cut(s)	134, 224, 593, 939, 1008
BcnI	CCSGG	2 cut(s)	545, 1247
BcoDI	GTCTC	5 cut(s)	492, 574, 629, 924, 974
BfaI	CTAG	3 cut(s)	62, 1046, 1218
BfrI	CTTAAG	1 cut(s)	1055
BglII	AGATCT	1 cut(s)	1223
BisI	GCNGC	6 cut(s)	349, 925, 1014, 1068, 1261, 1356
BlsI	GCNGC	6 cut(s)	350, 926, 1015, 1069, 1262, 1357
BmcAI	AGTACT	1 cut(s)	770
Bme1390I	CCNGG	7 cut(s)	134, 224, 545, 593, 939, 1008, 1247
Bme18I	GGWCC	2 cut(s)	4, 640
BmeT110I	CYCGRG	1 cut(s)	632
BmgT120I	GGNCC	8 cut(s)	4, 341, 372, 536, 546, 547, 640, 669
BmiI	GGNNCC	7 cut(s)	6, 343, 373, 404, 548, 670, 936
BmrFI	CCNGG	7 cut(s)	134, 224, 545, 593, 939, 1008, 1247
BmrI	ACTGGG	1 cut(s)	544
BmsI	GCATC	5 cut(s)	664, 903, 1163, 1244, 1342
BmtI	GCTAGC	1 cut(s)	1221
BmuI	ACTGGG	1 cut(s)	544
BpiI	GAAGAC	2 cut(s)	507, 887
BplI	GAGNNNNNCTC	2 cut(s)	554, 586
BpmI	CTGGAG	3 cut(s)	575, 839, 1344
Bpu10I	CCTNAGC	1 cut(s)	993
BpuEI	CTTGAG	1 cut(s)	698
BpuMI	CCSGG	2 cut(s)	545, 1247
BsaI	GGTCTC	1 cut(s)	974
BsaJI	CCNNGG	8 cut(s)	132, 204, 222, 938, 987, 1092, 1157, 1167
Bse118I	RCCGGY	1 cut(s)	533
Bse1I	ACTGG	2 cut(s)	550, 1277
Bse21I	CCTNAGG	1 cut(s)	578
BseBI	CCWGG	5 cut(s)	134, 224, 593, 939, 1008
BseDI	CCNNGG	8 cut(s)	132, 204, 222, 938, 987, 1092, 1157, 1167
BseGI	GGATG	6 cut(s)	918, 949, 1003, 1178, 1235, 1255
BseMII	CTCAG	5 cut(s)	209, 569, 711, 1007, 1062
BseNI	ACTGG	2 cut(s)	550, 1277
BseRI	GAGGAG	6 cut(s)	59, 62, 181, 220, 737, 1044
BseSI	GKGCMC	2 cut(s)	550, 1384
BseXI	GCAGC	4 cut(s)	1000, 1079, 1272, 1342
Bsh1236I	CGCG	3 cut(s)	420, 496, 924
BsiHKAI	GWGCWC	2 cut(s)	714, 1384
BsiHKCI	CYCGRG	1 cut(s)	632
BsiSI	CCGG	5 cut(s)	375, 519, 534, 544, 1247
BsmAI	GTCTC	5 cut(s)	492, 574, 629, 924, 974
BsmBI	CGTCTC	3 cut(s)	574, 629, 924
Bso31I	GGTCTC	1 cut(s)	974
BsoBI	CYCGRG	1 cut(s)	632
Bsp120I	GGGCCC	1 cut(s)	546
Bsp1286I	GDGCHC	3 cut(s)	550, 714, 1384
Bsp143I	GATC	3 cut(s)	607, 729, 1223
Bsp19I	CCATGG	3 cut(s)	987, 1157, 1167
BspCNI	CTCAG	5 cut(s)	208, 570, 712, 1006, 1063
BspFNI	CGCG	3 cut(s)	420, 496, 924
BspHI	TCATGA	1 cut(s)	703
BspLI	GGNNCC	7 cut(s)	6, 343, 373, 404, 548, 670, 936
BspOI	GCTAGC	1 cut(s)	1221
BspPI	GGATC	1 cut(s)	737
BspTI	CTTAAG	1 cut(s)	1055
BspTNI	GGTCTC	1 cut(s)	974
BsrBI	CCGCTC	1 cut(s)	319
BsrFI	RCCGGY	1 cut(s)	533
BsrI	ACTGG	2 cut(s)	550, 1277
BssAI	RCCGGY	1 cut(s)	533
BssECI	CCNNGG	8 cut(s)	132, 204, 222, 938, 987, 1092, 1157, 1167
BssMI	GATC	3 cut(s)	607, 729, 1223
BssT1I	CCWWGG	5 cut(s)	204, 987, 1092, 1157, 1167
Bst2UI	CCWGG	5 cut(s)	134, 224, 593, 939, 1008
Bst4CI	ACNGT	3 cut(s)	640, 1293, 1331
Bst6I	CTCTTC	1 cut(s)	191
BstAFI	CTTAAG	1 cut(s)	1055
BstAPI	GCANNNNNTGC	1 cut(s)	683
BstC8I	GCNNGC	4 cut(s)	654, 1164, 1219, 1372
BstDEI	CTNAG	5 cut(s)	195, 578, 720, 993, 1071
BstDSI	CCRYGG	3 cut(s)	987, 1157, 1167
BstF5I	GGATG	6 cut(s)	918, 949, 1003, 1178, 1235, 1255
BstFNI	CGCG	3 cut(s)	420, 496, 924
BstKTI	GATC	3 cut(s)	610, 732, 1226
BstMAI	GTCTC	5 cut(s)	492, 574, 629, 924, 974
BstMBI	GATC	3 cut(s)	607, 729, 1223
BstMWI	GCNNNNNNNGC	6 cut(s)	269, 348, 683, 814, 989, 1361
BstNI	CCWGG	5 cut(s)	134, 224, 593, 939, 1008
BstNSI	RCATGY	2 cut(s)	829, 1374
BstSCI	CCNGG	7 cut(s)	132, 222, 543, 591, 937, 1006, 1245
BstSLI	GKGCMC	2 cut(s)	550, 1384
BstUI	CGCG	3 cut(s)	420, 496, 924
BstV1I	GCAGC	4 cut(s)	1000, 1079, 1272, 1342
BstV2I	GAAGAC	2 cut(s)	507, 887
BstX2I	RGATCY	1 cut(s)	1223
BstYI	RGATCY	1 cut(s)	1223
Bsu36I	CCTNAGG	1 cut(s)	578
BtgI	CCRYGG	3 cut(s)	987, 1157, 1167
BtgZI	GCGATG	2 cut(s)	755, 942
BtsCI	GGATG	6 cut(s)	918, 949, 1003, 1178, 1235, 1255
BtsIMutI	CAGTG	1 cut(s)	1336
Cac8I	GCNNGC	4 cut(s)	654, 1164, 1219, 1372
CaiI	CAGNNNCTG	1 cut(s)	1013
CciI	TCATGA	1 cut(s)	703
Cfr10I	RCCGGY	1 cut(s)	533
Cfr13I	GGNCC	8 cut(s)	4, 341, 372, 536, 546, 547, 640, 669
CseI	GACGC	1 cut(s)	409
Csp6I	GTAC	2 cut(s)	769, 790
CviAII	CATG	8 cut(s)	463, 704, 826, 988, 1143, 1158, 1168, 1371
CviQI	GTAC	2 cut(s)	769, 790
DdeI	CTNAG	5 cut(s)	195, 578, 720, 993, 1071
DpnI	GATC	3 cut(s)	609, 731, 1225
DpnII	GATC	3 cut(s)	607, 729, 1223
DrdI	GACNNNNNNGTC	1 cut(s)	419
DseDI	GACNNNNNNGTC	1 cut(s)	419
EaeI	YGGCCR	3 cut(s)	177, 654, 1164
Eam1104I	CTCTTC	1 cut(s)	191
EarI	CTCTTC	1 cut(s)	191
EciI	GGCGGA	4 cut(s)	244, 250, 298, 436
Ecl136II	GAGCTC	1 cut(s)	712
Eco130I	CCWWGG	5 cut(s)	204, 987, 1092, 1157, 1167
Eco147I	AGGCCT	1 cut(s)	227
Eco24I	GRGCYC	2 cut(s)	550, 714
Eco31I	GGTCTC	1 cut(s)	974
Eco47I	GGWCC	2 cut(s)	4, 640
Eco53kI	GAGCTC	1 cut(s)	712
Eco57I	CTGAAG	2 cut(s)	1059, 1291
Eco81I	CCTNAGG	1 cut(s)	578
Eco88I	CYCGRG	1 cut(s)	632
EcoICRI	GAGCTC	1 cut(s)	712
EcoRI	GAATTC	1 cut(s)	378
EcoRII	CCWGG	5 cut(s)	132, 222, 591, 937, 1006
EcoT14I	CCWWGG	5 cut(s)	204, 987, 1092, 1157, 1167
EcoT38I	GRGCYC	2 cut(s)	550, 714
ErhI	CCWWGG	5 cut(s)	204, 987, 1092, 1157, 1167
Esp3I	CGTCTC	3 cut(s)	574, 629, 924
FaeI	CATG	8 cut(s)	466, 707, 829, 991, 1146, 1161, 1171, 1374
FalI	AAGNNNNNCTT	2 cut(s)	275, 307
FatI	CATG	8 cut(s)	462, 703, 825, 987, 1142, 1157, 1167, 1370
FauI	CCCGC	4 cut(s)	324, 353, 501, 1193
FauNDI	CATATG	1 cut(s)	795
FblI	GTMKAC	1 cut(s)	480
Fnu4HI	GCNGC	6 cut(s)	349, 925, 1014, 1068, 1261, 1356
FokI	GGATG	6 cut(s)	925, 956, 1010, 1185, 1222, 1262
FriOI	GRGCYC	2 cut(s)	550, 714
Fsp4HI	GCNGC	6 cut(s)	349, 925, 1014, 1068, 1261, 1356
FspBI	CTAG	3 cut(s)	62, 1046, 1218
GluI	GCNGC	6 cut(s)	349, 925, 1014, 1068, 1261, 1356
GsuI	CTGGAG	3 cut(s)	575, 839, 1344
HapII	CCGG	5 cut(s)	375, 519, 534, 544, 1247
HgaI	GACGC	1 cut(s)	409
Hin1II	CATG	8 cut(s)	466, 707, 829, 991, 1146, 1161, 1171, 1374
HinfI	GANTC	6 cut(s)	35, 458, 563, 586, 621, 734
HpaII	CCGG	5 cut(s)	375, 519, 534, 544, 1247
HphI	GGTGA	3 cut(s)	871, 886, 1146
Hpy166II	GTNNAC	4 cut(s)	300, 424, 481, 1382
Hpy188I	TCNGA	8 cut(s)	43, 574, 607, 620, 721, 851, 1116, 1310
Hpy188III	TCNNGA	3 cut(s)	625, 704, 995
Hpy8I	GTNNAC	4 cut(s)	300, 424, 481, 1382
Hpy99I	CGWCG	3 cut(s)	387, 563, 650
HpyCH4III	ACNGT	3 cut(s)	640, 1293, 1331
HpyCH4V	TGCA	7 cut(s)	677, 1067, 1133, 1146, 1235, 1374, 1382
HpyF10VI	GCNNNNNNNGC	6 cut(s)	269, 348, 683, 814, 989, 1361
HpyF3I	CTNAG	5 cut(s)	195, 578, 720, 993, 1071
Hsp92II	CATG	8 cut(s)	466, 707, 829, 991, 1146, 1161, 1171, 1374
Kzo9I	GATC	3 cut(s)	607, 729, 1223
LmnI	GCTCC	6 cut(s)	46, 324, 898, 934, 1098, 1363
Lsp1109I	GCAGC	4 cut(s)	1000, 1079, 1272, 1342
LweI	GCATC	5 cut(s)	664, 903, 1163, 1244, 1342
MaeI	CTAG	3 cut(s)	62, 1046, 1218
MaeIII	GTNAC	2 cut(s)	1287, 1315
MalI	GATC	3 cut(s)	609, 731, 1225
MbiI	CCGCTC	1 cut(s)	319
MboI	GATC	3 cut(s)	607, 729, 1223
MboII	GAAGA	6 cut(s)	72, 178, 507, 595, 892, 1297
MflI	RGATCY	1 cut(s)	1223
MhlI	GDGCHC	3 cut(s)	550, 714, 1384
MlsI	TGGCCA	3 cut(s)	179, 656, 1166
MluCI	AATT	2 cut(s)	10, 378
MluNI	TGGCCA	3 cut(s)	179, 656, 1166
MlyI	GAGTC	3 cut(s)	467, 572, 743
MmeI	TCCRAC	3 cut(s)	187, 597, 849
Mox20I	TGGCCA	3 cut(s)	179, 656, 1166
MscI	TGGCCA	3 cut(s)	179, 656, 1166
MseI	TTAA	4 cut(s)	765, 813, 1056, 1277
Msp20I	TGGCCA	3 cut(s)	179, 656, 1166
MspA1I	CMGCKG	2 cut(s)	1070, 1263
MspCI	CTTAAG	1 cut(s)	1055
MspI	CCGG	5 cut(s)	375, 519, 534, 544, 1247
MspR9I	CCNGG	7 cut(s)	134, 224, 545, 593, 939, 1008, 1247
MvaI	CCWGG	5 cut(s)	134, 224, 593, 939, 1008
MvnI	CGCG	3 cut(s)	420, 496, 924
MwoI	GCNNNNNNNGC	6 cut(s)	269, 348, 683, 814, 989, 1361
NciI	CCSGG	2 cut(s)	545, 1247
NcoI	CCATGG	3 cut(s)	987, 1157, 1167
NdeI	CATATG	1 cut(s)	795
NdeII	GATC	3 cut(s)	607, 729, 1223
NheI	GCTAGC	1 cut(s)	1217
NlaIII	CATG	8 cut(s)	466, 707, 829, 991, 1146, 1161, 1171, 1374
NlaIV	GGNNCC	7 cut(s)	6, 343, 373, 404, 548, 670, 936
NmeAIII	GCCGAG	1 cut(s)	318
NspI	RCATGY	2 cut(s)	829, 1374
PaeI	GCATGC	1 cut(s)	1374
PagI	TCATGA	1 cut(s)	703
PceI	AGGCCT	1 cut(s)	227
PcsI	WCGNNNNNNNCGW	3 cut(s)	417, 564, 630
PfeI	GAWTC	3 cut(s)	35, 586, 621
PflMI	CCANNNNNTGG	1 cut(s)	399
PkrI	GCNGC	6 cut(s)	350, 926, 1015, 1069, 1262, 1357
PleI	GAGTC	3 cut(s)	466, 571, 742
PpsI	GAGTC	3 cut(s)	466, 571, 742
Psp124BI	GAGCTC	1 cut(s)	714
Psp6I	CCWGG	5 cut(s)	132, 222, 591, 937, 1006
PspGI	CCWGG	5 cut(s)	132, 222, 591, 937, 1006
PspN4I	GGNNCC	7 cut(s)	6, 343, 373, 404, 548, 670, 936
PspOMI	GGGCCC	1 cut(s)	546
PspPI	GGNCC	8 cut(s)	4, 341, 372, 536, 546, 547, 640, 669
PstNI	CAGNNNCTG	1 cut(s)	1013
PsuI	RGATCY	1 cut(s)	1223
PvuII	CAGCTG	1 cut(s)	1070
RsaI	GTAC	2 cut(s)	770, 791
RsaNI	GTAC	2 cut(s)	769, 790
SacI	GAGCTC	1 cut(s)	714
SaqAI	TTAA	4 cut(s)	765, 813, 1056, 1277
SatI	GCNGC	6 cut(s)	349, 925, 1014, 1068, 1261, 1356
Sau3AI	GATC	3 cut(s)	607, 729, 1223
Sau96I	GGNCC	8 cut(s)	4, 341, 372, 536, 546, 547, 640, 669
ScaI	AGTACT	1 cut(s)	770
SchI	GAGTC	3 cut(s)	467, 572, 743
ScrFI	CCNGG	7 cut(s)	134, 224, 545, 593, 939, 1008, 1247
SduI	GDGCHC	3 cut(s)	550, 714, 1384
SfaNI	GCATC	5 cut(s)	664, 903, 1163, 1244, 1342
SinI	GGWCC	2 cut(s)	4, 640
SmlI	CTYRAG	2 cut(s)	713, 1055
SmoI	CTYRAG	2 cut(s)	713, 1055
SphI	GCATGC	1 cut(s)	1374
Sse9I	AATT	2 cut(s)	10, 378
SseBI	AGGCCT	1 cut(s)	227
SspMI	CTAG	3 cut(s)	62, 1046, 1218
SstI	GAGCTC	1 cut(s)	714
StuI	AGGCCT	1 cut(s)	227
StyD4I	CCNGG	7 cut(s)	132, 222, 543, 591, 937, 1006, 1245
StyI	CCWWGG	5 cut(s)	204, 987, 1092, 1157, 1167
TaaI	ACNGT	3 cut(s)	640, 1293, 1331
TaqI	TCGA	7 cut(s)	357, 385, 489, 525, 561, 648, 732
TasI	AATT	2 cut(s)	10, 378
TatI	WGTACW	1 cut(s)	768
TauI	GCSGC	2 cut(s)	351, 927
TfiI	GAWTC	3 cut(s)	35, 586, 621
Tru1I	TTAA	4 cut(s)	765, 813, 1056, 1277
Tru9I	TTAA	4 cut(s)	765, 813, 1056, 1277
TscAI	CASTG	1 cut(s)	1336
TseI	GCWGC	4 cut(s)	1013, 1067, 1260, 1355
TspDTI	ATGAA	3 cut(s)	758, 920, 1131
TspGWI	ACGGA	2 cut(s)	457, 556
TspRI	CASTG	1 cut(s)	1336
Van91I	CCANNNNNTGG	1 cut(s)	399
Vha464I	CTTAAG	1 cut(s)	1055
VneI	GTGCAC	1 cut(s)	1380
VpaK11BI	GGWCC	2 cut(s)	4, 640
XapI	RAATTY	1 cut(s)	378
XceI	RCATGY	2 cut(s)	829, 1374
XcmI	CCANNNNNNNNNTGG	1 cut(s)	892
XmiI	GTMKAC	1 cut(s)	480
XspI	CTAG	3 cut(s)	62, 1046, 1218
ZrmI	AGTACT	1 cut(s)	770

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.