Ring finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54360 AT3G54360 |
| fragaria_vesca | FvH4_7g04620 FvH4_7g04620 |
| malus_domestica | MD07G1085200.v1.1 |
| prunus_persica | Prupe.2G051700_v2.0.a1 |
| pyrus_communis | pycom07g03790 |
| rosa_chinensis | RchiOBHm_Chr1g0330051 |
| rosa_laevigata | RLG00000029838 |
| rosa_multiflora | Rmu_sc0009365.1_g000027 |
| rosa_roxburghii | Rroxscaffold_4G00320410 |
| rosa_rugosa | Rorug01G0085400 |
| rosa_samantha | Rh1AG104000 Rh1BG082400 Rh1CG098900 Rh1DG106100 |
| rosa_wichuraiana | Rw0G013520 Rw1G008790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 274 |
| Acc65I | GGTACC | 1 cut(s) | 262 |
| AccB1I | GGYRCC | 1 cut(s) | 262 |
| AccI | GTMKAC | 1 cut(s) | 56 |
| AciI | CCGC | 4 cut(s) | 81, 426, 1040, 1156 |
| AclWI | GGATC | 1 cut(s) | 699 |
| AcsI | RAATTY | 2 cut(s) | 824, 1005 |
| AcuI | CTGAAG | 2 cut(s) | 449, 1152 |
| AfaI | GTAC | 3 cut(s) | 264, 676, 1167 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 50, 425, 778 |
| AflII | CTTAAG | 1 cut(s) | 1178 |
| AflIII | ACRYGT | 1 cut(s) | 376 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 52 |
| AjiI | CACGTC | 1 cut(s) | 968 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 982, 1014 |
| AleI | CACNNNNGTG | 1 cut(s) | 377 |
| AluBI | AGCT | 9 cut(s) | 35, 107, 307, 321, 617, 736, 792, 929, 953 |
| AluI | AGCT | 9 cut(s) | 35, 107, 307, 321, 617, 736, 792, 929, 953 |
| Alw26I | GTCTC | 3 cut(s) | 777, 883, 1096 |
| AlwI | GGATC | 1 cut(s) | 699 |
| Ama87I | CYCGRG | 1 cut(s) | 1145 |
| AoxI | GGCC | 2 cut(s) | 311, 493 |
| ApeKI | GCWGC | 4 cut(s) | 35, 107, 929, 1073 |
| ApoI | RAATTY | 2 cut(s) | 824, 1005 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 462 |
| Asp718I | GGTACC | 1 cut(s) | 262 |
| AspS9I | GGNCC | 1 cut(s) | 311 |
| AsuHPI | GGTGA | 1 cut(s) | 773 |
| AvaI | CYCGRG | 1 cut(s) | 1145 |
| BaeGI | GKGCMC | 2 cut(s) | 278, 637 |
| BanI | GGYRCC | 1 cut(s) | 262 |
| BbvI | GCAGC | 4 cut(s) | 22, 94, 916, 1085 |
| BccI | CCATC | 4 cut(s) | 44, 466, 772, 1076 |
| BceAI | ACGGC | 3 cut(s) | 168, 826, 1169 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 110, 144 |
| BclI | TGATCA | 1 cut(s) | 478 |
| BcoDI | GTCTC | 3 cut(s) | 777, 883, 1096 |
| BfaI | CTAG | 2 cut(s) | 501, 698 |
| BfmI | CTRYAG | 2 cut(s) | 766, 795 |
| BfrI | CTTAAG | 1 cut(s) | 1178 |
| BfuAI | ACCTGC | 1 cut(s) | 274 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 282 |
| BglII | AGATCT | 3 cut(s) | 512, 898, 919 |
| BisI | GCNGC | 5 cut(s) | 36, 108, 930, 1074, 1157 |
| BlsI | GCNGC | 5 cut(s) | 37, 109, 931, 1075, 1158 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 52 |
| BmeT110I | CYCGRG | 1 cut(s) | 1145 |
| BmgBI | CACGTC | 1 cut(s) | 968 |
| BmgT120I | GGNCC | 1 cut(s) | 311 |
| BmiI | GGNNCC | 1 cut(s) | 264 |
| BmsI | GCATC | 3 cut(s) | 112, 961, 1189 |
| BpmI | CTGGAG | 1 cut(s) | 1190 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1027 |
| BpuEI | CTTGAG | 1 cut(s) | 772 |
| BsaJI | CCNNGG | 3 cut(s) | 585, 678, 748 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 50, 425, 778 |
| Bse1I | ACTGG | 2 cut(s) | 1128, 1173 |
| Bse3DI | GCAATG | 2 cut(s) | 675, 981 |
| BseDI | CCNNGG | 3 cut(s) | 585, 678, 748 |
| BseGI | GGATG | 2 cut(s) | 215, 1018 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 50, 425, 778 |
| BseMI | GCAATG | 2 cut(s) | 675, 981 |
| BseNI | ACTGG | 2 cut(s) | 1128, 1173 |
| BseSI | GKGCMC | 2 cut(s) | 278, 637 |
| BseXI | GCAGC | 4 cut(s) | 22, 94, 916, 1085 |
| BsgI | GTGCAG | 2 cut(s) | 762, 1194 |
| BshFI | GGCC | 2 cut(s) | 313, 495 |
| BshNI | GGYRCC | 1 cut(s) | 262 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1145 |
| BslFI | GGGAC | 1 cut(s) | 99 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 50, 425, 778 |
| BsmAI | GTCTC | 3 cut(s) | 777, 883, 1096 |
| BsmFI | GGGAC | 1 cut(s) | 99 |
| BsnI | GGCC | 2 cut(s) | 313, 495 |
| BsoBI | CYCGRG | 1 cut(s) | 1145 |
| Bsp1286I | GDGCHC | 2 cut(s) | 278, 637 |
| Bsp143I | GATC | 5 cut(s) | 478, 512, 691, 898, 919 |
| Bsp19I | CCATGG | 1 cut(s) | 585 |
| BspACI | CCGC | 4 cut(s) | 81, 426, 1040, 1156 |
| BspANI | GGCC | 2 cut(s) | 313, 495 |
| BspLI | GGNNCC | 1 cut(s) | 264 |
| BspMAI | CTGCAG | 1 cut(s) | 799 |
| BspMI | ACCTGC | 1 cut(s) | 274 |
| BspPI | GGATC | 1 cut(s) | 699 |
| BspT107I | GGYRCC | 1 cut(s) | 262 |
| BspTI | CTTAAG | 1 cut(s) | 1178 |
| BsrDI | GCAATG | 2 cut(s) | 675, 981 |
| BsrI | ACTGG | 2 cut(s) | 1128, 1173 |
| BssECI | CCNNGG | 3 cut(s) | 585, 678, 748 |
| BssMI | GATC | 5 cut(s) | 478, 512, 691, 898, 919 |
| BssT1I | CCWWGG | 2 cut(s) | 585, 748 |
| Bst4CI | ACNGT | 3 cut(s) | 262, 405, 767 |
| Bst6I | CTCTTC | 2 cut(s) | 534, 807 |
| BstAFI | CTTAAG | 1 cut(s) | 1178 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 393, 632 |
| BstC8I | GCNNGC | 1 cut(s) | 755 |
| BstDEI | CTNAG | 1 cut(s) | 1027 |
| BstDSI | CCRYGG | 1 cut(s) | 585 |
| BstF5I | GGATG | 2 cut(s) | 215, 1018 |
| BstKTI | GATC | 5 cut(s) | 481, 515, 694, 901, 922 |
| BstMAI | GTCTC | 3 cut(s) | 777, 883, 1096 |
| BstMBI | GATC | 5 cut(s) | 478, 512, 691, 898, 919 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 282, 393, 423, 623, 632, 1037, 1156, 1208 |
| BstNSI | RCATGY | 2 cut(s) | 380, 757 |
| BstSFI | CTRYAG | 2 cut(s) | 766, 795 |
| BstSLI | GKGCMC | 2 cut(s) | 278, 637 |
| BstV1I | GCAGC | 4 cut(s) | 22, 94, 916, 1085 |
| BstX2I | RGATCY | 3 cut(s) | 512, 898, 919 |
| BstYI | RGATCY | 3 cut(s) | 512, 898, 919 |
| BsuRI | GGCC | 2 cut(s) | 313, 495 |
| BtgI | CCRYGG | 1 cut(s) | 585 |
| BtgZI | GCGATG | 1 cut(s) | 791 |
| BtrI | CACGTC | 1 cut(s) | 968 |
| BtsCI | GGATG | 2 cut(s) | 215, 1018 |
| BveI | ACCTGC | 1 cut(s) | 274 |
| Cac8I | GCNNGC | 1 cut(s) | 755 |
| Cfr13I | GGNCC | 1 cut(s) | 311 |
| Csp6I | GTAC | 3 cut(s) | 263, 675, 1166 |
| CviAII | CATG | 5 cut(s) | 377, 497, 586, 754, 1099 |
| CviQI | GTAC | 3 cut(s) | 263, 675, 1166 |
| DdeI | CTNAG | 1 cut(s) | 1027 |
| DpnI | GATC | 5 cut(s) | 480, 514, 693, 900, 921 |
| DpnII | GATC | 5 cut(s) | 478, 512, 691, 898, 919 |
| DraI | TTTAAA | 1 cut(s) | 957 |
| DriI | GACNNNNNGTC | 1 cut(s) | 52 |
| Eam1104I | CTCTTC | 2 cut(s) | 534, 807 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 52 |
| EarI | CTCTTC | 2 cut(s) | 534, 807 |
| Eco130I | CCWWGG | 2 cut(s) | 585, 748 |
| Eco57I | CTGAAG | 2 cut(s) | 449, 1152 |
| Eco88I | CYCGRG | 1 cut(s) | 1145 |
| EcoRI | GAATTC | 1 cut(s) | 824 |
| EcoT14I | CCWWGG | 2 cut(s) | 585, 748 |
| ErhI | CCWWGG | 2 cut(s) | 585, 748 |
| FaeI | CATG | 5 cut(s) | 380, 500, 589, 757, 1102 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 583, 615 |
| FaqI | GGGAC | 1 cut(s) | 99 |
| FatI | CATG | 5 cut(s) | 376, 496, 585, 753, 1098 |
| FbaI | TGATCA | 1 cut(s) | 478 |
| FblI | GTMKAC | 1 cut(s) | 56 |
| Fnu4HI | GCNGC | 5 cut(s) | 36, 108, 930, 1074, 1157 |
| FokI | GGATG | 2 cut(s) | 222, 1025 |
| Fsp4HI | GCNGC | 5 cut(s) | 36, 108, 930, 1074, 1157 |
| FspBI | CTAG | 2 cut(s) | 501, 698 |
| GluI | GCNGC | 5 cut(s) | 36, 108, 930, 1074, 1157 |
| GsuI | CTGGAG | 1 cut(s) | 1190 |
| HaeIII | GGCC | 2 cut(s) | 313, 495 |
| Hin1II | CATG | 5 cut(s) | 380, 500, 589, 757, 1102 |
| HincII | GTYRAC | 1 cut(s) | 57 |
| HindII | GTYRAC | 1 cut(s) | 57 |
| HindIII | AAGCTT | 1 cut(s) | 305 |
| HinfI | GANTC | 9 cut(s) | 58, 242, 251, 290, 785, 1054, 1112, 1127, 1136 |
| HphI | GGTGA | 1 cut(s) | 773 |
| Hpy166II | GTNNAC | 3 cut(s) | 57, 675, 731 |
| Hpy188I | TCNGA | 3 cut(s) | 468, 965, 1132 |
| Hpy188III | TCNNGA | 8 cut(s) | 28, 44, 116, 188, 215, 689, 1010, 1145 |
| Hpy8I | GTNNAC | 3 cut(s) | 57, 675, 731 |
| Hpy99I | CGWCG | 3 cut(s) | 10, 122, 154 |
| HpyAV | CCTTC | 5 cut(s) | 218, 473, 485, 1008, 1088 |
| HpyCH4III | ACNGT | 3 cut(s) | 262, 405, 767 |
| HpyCH4IV | ACGT | 2 cut(s) | 579, 967 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 282, 393, 423, 623, 632, 1037, 1156, 1208 |
| HpyF3I | CTNAG | 1 cut(s) | 1027 |
| HpySE526I | ACGT | 2 cut(s) | 579, 967 |
| Hsp92II | CATG | 5 cut(s) | 380, 500, 589, 757, 1102 |
| KpnI | GGTACC | 1 cut(s) | 266 |
| Ksp22I | TGATCA | 1 cut(s) | 478 |
| Kzo9I | GATC | 5 cut(s) | 478, 512, 691, 898, 919 |
| LmnI | GCTCC | 1 cut(s) | 1000 |
| Lsp1109I | GCAGC | 4 cut(s) | 22, 94, 916, 1085 |
| LweI | GCATC | 3 cut(s) | 112, 961, 1189 |
| MaeI | CTAG | 2 cut(s) | 501, 698 |
| MaeII | ACGT | 2 cut(s) | 579, 967 |
| MaeIII | GTNAC | 1 cut(s) | 761 |
| MalI | GATC | 5 cut(s) | 480, 514, 693, 900, 921 |
| MboI | GATC | 5 cut(s) | 478, 512, 691, 898, 919 |
| MboII | GAAGA | 5 cut(s) | 481, 551, 824, 929, 1145 |
| MflI | RGATCY | 3 cut(s) | 512, 898, 919 |
| MhlI | GDGCHC | 2 cut(s) | 278, 637 |
| MluCI | AATT | 6 cut(s) | 75, 482, 504, 640, 824, 1005 |
| MlyI | GAGTC | 6 cut(s) | 52, 236, 284, 779, 1048, 1121 |
| MnlI | CCTC | 8 cut(s) | 136, 429, 535, 587, 615, 673, 696, 700 |
| MroXI | GAANNNNTTC | 1 cut(s) | 462 |
| MseI | TTAA | 5 cut(s) | 398, 408, 507, 956, 1179 |
| MslI | CAYNNNNRTG | 2 cut(s) | 377, 990 |
| MspCI | CTTAAG | 1 cut(s) | 1178 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 282, 393, 423, 623, 632, 1037, 1156, 1208 |
| NcoI | CCATGG | 1 cut(s) | 585 |
| NdeII | GATC | 5 cut(s) | 478, 512, 691, 898, 919 |
| NlaIII | CATG | 5 cut(s) | 380, 500, 589, 757, 1102 |
| NlaIV | GGNNCC | 1 cut(s) | 264 |
| NmeAIII | GCCGAG | 1 cut(s) | 797 |
| NmuCI | GTSAC | 1 cut(s) | 761 |
| NspI | RCATGY | 2 cut(s) | 380, 757 |
| OliI | CACNNNNGTG | 1 cut(s) | 377 |
| PaeI | GCATGC | 1 cut(s) | 757 |
| PaeR7I | CTCGAG | 1 cut(s) | 1145 |
| PciI | ACATGT | 1 cut(s) | 376 |
| PdmI | GAANNNNTTC | 1 cut(s) | 462 |
| PfeI | GAWTC | 3 cut(s) | 251, 1112, 1136 |
| PkrI | GCNGC | 5 cut(s) | 37, 109, 931, 1075, 1158 |
| PleI | GAGTC | 6 cut(s) | 52, 236, 284, 779, 1048, 1121 |
| PpsI | GAGTC | 6 cut(s) | 52, 236, 284, 779, 1048, 1121 |
| PscI | ACATGT | 1 cut(s) | 376 |
| PspN4I | GGNNCC | 1 cut(s) | 264 |
| PspPI | GGNCC | 1 cut(s) | 311 |
| PstI | CTGCAG | 1 cut(s) | 799 |
| PsuI | RGATCY | 3 cut(s) | 512, 898, 919 |
| RsaI | GTAC | 3 cut(s) | 264, 676, 1167 |
| RsaNI | GTAC | 3 cut(s) | 263, 675, 1166 |
| RseI | CAYNNNNRTG | 2 cut(s) | 377, 990 |
| SalI | GTCGAC | 1 cut(s) | 55 |
| SaqAI | TTAA | 5 cut(s) | 398, 408, 507, 956, 1179 |
| SatI | GCNGC | 5 cut(s) | 36, 108, 930, 1074, 1157 |
| Sau3AI | GATC | 5 cut(s) | 478, 512, 691, 898, 919 |
| Sau96I | GGNCC | 1 cut(s) | 311 |
| SchI | GAGTC | 6 cut(s) | 52, 236, 284, 779, 1048, 1121 |
| SduI | GDGCHC | 2 cut(s) | 278, 637 |
| SfaNI | GCATC | 3 cut(s) | 112, 961, 1189 |
| SfcI | CTRYAG | 2 cut(s) | 766, 795 |
| Sfr274I | CTCGAG | 1 cut(s) | 1145 |
| SlaI | CTCGAG | 1 cut(s) | 1145 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 377, 990 |
| SmlI | CTYRAG | 3 cut(s) | 787, 1145, 1178 |
| SmoI | CTYRAG | 3 cut(s) | 787, 1145, 1178 |
| SphI | GCATGC | 1 cut(s) | 757 |
| Sse9I | AATT | 6 cut(s) | 75, 482, 504, 640, 824, 1005 |
| SsiI | CCGC | 4 cut(s) | 81, 426, 1040, 1156 |
| SspI | AATATT | 1 cut(s) | 908 |
| SspMI | CTAG | 2 cut(s) | 501, 698 |
| StyI | CCWWGG | 2 cut(s) | 585, 748 |
| TaaI | ACNGT | 3 cut(s) | 262, 405, 767 |
| TaiI | ACGT | 2 cut(s) | 582, 970 |
| TaqI | TCGA | 6 cut(s) | 29, 56, 61, 133, 546, 1146 |
| TasI | AATT | 6 cut(s) | 75, 482, 504, 640, 824, 1005 |
| TatI | WGTACW | 1 cut(s) | 1165 |
| TauI | GCSGC | 1 cut(s) | 1159 |
| TfiI | GAWTC | 3 cut(s) | 251, 1112, 1136 |
| Tru1I | TTAA | 5 cut(s) | 398, 408, 507, 956, 1179 |
| Tru9I | TTAA | 5 cut(s) | 398, 408, 507, 956, 1179 |
| TseFI | GTSAC | 1 cut(s) | 761 |
| TseI | GCWGC | 4 cut(s) | 35, 107, 929, 1073 |
| Tsp45I | GTSAC | 1 cut(s) | 761 |
| TspDTI | ATGAA | 5 cut(s) | 471, 660, 848, 992, 1080 |
| Vha464I | CTTAAG | 1 cut(s) | 1178 |
| XapI | RAATTY | 2 cut(s) | 824, 1005 |
| XceI | RCATGY | 2 cut(s) | 380, 757 |
| XhoI | CTCGAG | 1 cut(s) | 1145 |
| XmiI | GTMKAC | 1 cut(s) | 56 |
| XmnI | GAANNNNTTC | 1 cut(s) | 462 |
| XspI | CTAG | 2 cut(s) | 501, 698 |