Ring finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54360 AT3G54360 |
| fragaria_vesca | FvH4_7g04620 FvH4_7g04620 |
| malus_domestica | MD07G1085200.v1.1 |
| prunus_persica | Prupe.2G051700_v2.0.a1 |
| pyrus_communis | pycom07g03790 |
| rosa_chinensis | RchiOBHm_Chr1g0330051 |
| rosa_laevigata | RLG00000029838 |
| rosa_multiflora | Rmu_sc0009365.1_g000027 |
| rosa_roxburghii | Rroxscaffold_4G00320410 |
| rosa_rugosa | Rorug01G0085400 |
| rosa_samantha | Rh1AG104000 Rh1BG082400 Rh1CG098900 Rh1DG106100 |
| rosa_wichuraiana | Rw0G013520 Rw1G008790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 159 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 394, 441 |
| AccI | GTMKAC | 1 cut(s) | 37 |
| AciI | CCGC | 3 cut(s) | 188, 224, 227 |
| AclWI | GGATC | 1 cut(s) | 455 |
| AcyI | GRCGYC | 1 cut(s) | 218 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 394, 441, 639 |
| AgeI | ACCGGT | 1 cut(s) | 154 |
| AgsI | TTSAA | 2 cut(s) | 31, 277 |
| AjnI | CCWGG | 1 cut(s) | 434 |
| AluBI | AGCT | 6 cut(s) | 61, 280, 294, 400, 432, 596 |
| AluI | AGCT | 6 cut(s) | 61, 280, 294, 400, 432, 596 |
| Alw21I | GWGCWC | 1 cut(s) | 434 |
| Alw26I | GTCTC | 5 cut(s) | 145, 241, 489, 497, 653 |
| AlwI | GGATC | 1 cut(s) | 455 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 651 |
| AoxI | GGCC | 1 cut(s) | 283 |
| ApaI | GGGCCC | 1 cut(s) | 287 |
| ApeKI | GCWGC | 1 cut(s) | 294 |
| AsiGI | ACCGGT | 1 cut(s) | 154 |
| AspS9I | GGNCC | 2 cut(s) | 283, 284 |
| BaeGI | GKGCMC | 1 cut(s) | 287 |
| BanII | GRGCYC | 3 cut(s) | 287, 434, 616 |
| BbsI | GAAGAC | 1 cut(s) | 418 |
| Bbv12I | GWGCWC | 1 cut(s) | 434 |
| BbvI | GCAGC | 1 cut(s) | 281 |
| BciT130I | CCWGG | 1 cut(s) | 436 |
| BcoDI | GTCTC | 5 cut(s) | 145, 241, 489, 497, 653 |
| BfaI | CTAG | 1 cut(s) | 62 |
| BisI | GCNGC | 3 cut(s) | 225, 228, 295 |
| BlsI | GCNGC | 3 cut(s) | 226, 229, 296 |
| Bme1390I | CCNGG | 1 cut(s) | 436 |
| BmgT120I | GGNCC | 2 cut(s) | 283, 284 |
| BmiI | GGNNCC | 3 cut(s) | 192, 285, 419 |
| BmrFI | CCNGG | 1 cut(s) | 436 |
| BpiI | GAAGAC | 1 cut(s) | 418 |
| BpmI | CTGGAG | 1 cut(s) | 418 |
| BsaHI | GRCGYC | 1 cut(s) | 218 |
| BsaI | GGTCTC | 2 cut(s) | 145, 489 |
| BsaJI | CCNNGG | 2 cut(s) | 252, 435 |
| BsaWI | WCCGGW | 1 cut(s) | 154 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 394, 441, 639 |
| Bse118I | RCCGGY | 3 cut(s) | 154, 184, 214 |
| Bse3DI | GCAATG | 1 cut(s) | 388 |
| BseBI | CCWGG | 1 cut(s) | 436 |
| BseDI | CCNNGG | 2 cut(s) | 252, 435 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 394, 441, 639 |
| BseMI | GCAATG | 1 cut(s) | 388 |
| BseMII | CTCAG | 2 cut(s) | 281, 658 |
| BseRI | GAGGAG | 2 cut(s) | 512, 515 |
| BseSI | GKGCMC | 1 cut(s) | 287 |
| BseXI | GCAGC | 1 cut(s) | 281 |
| BseYI | CCCAGC | 1 cut(s) | 280 |
| BshFI | GGCC | 1 cut(s) | 285 |
| BshTI | ACCGGT | 1 cut(s) | 154 |
| BsiHKAI | GWGCWC | 1 cut(s) | 434 |
| BsiSI | CCGG | 3 cut(s) | 155, 185, 215 |
| BslFI | GGGAC | 1 cut(s) | 323 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 394, 441, 639 |
| BsmAI | GTCTC | 5 cut(s) | 145, 241, 489, 497, 653 |
| BsmFI | GGGAC | 1 cut(s) | 323 |
| BsmI | GAATGC | 1 cut(s) | 605 |
| BsnI | GGCC | 1 cut(s) | 285 |
| Bso31I | GGTCTC | 2 cut(s) | 145, 489 |
| Bsp120I | GGGCCC | 1 cut(s) | 283 |
| Bsp1286I | GDGCHC | 3 cut(s) | 287, 434, 616 |
| Bsp143I | GATC | 2 cut(s) | 41, 447 |
| BspACI | CCGC | 3 cut(s) | 188, 224, 227 |
| BspANI | GGCC | 1 cut(s) | 285 |
| BspCNI | CTCAG | 2 cut(s) | 282, 657 |
| BspLI | GGNNCC | 3 cut(s) | 192, 285, 419 |
| BspPI | GGATC | 1 cut(s) | 455 |
| BspTNI | GGTCTC | 2 cut(s) | 145, 489 |
| BsrDI | GCAATG | 1 cut(s) | 388 |
| BsrFI | RCCGGY | 3 cut(s) | 154, 184, 214 |
| BssAI | RCCGGY | 3 cut(s) | 154, 184, 214 |
| BssECI | CCNNGG | 2 cut(s) | 252, 435 |
| BssMI | GATC | 2 cut(s) | 41, 447 |
| BssNI | GRCGYC | 1 cut(s) | 218 |
| BssT1I | CCWWGG | 1 cut(s) | 252 |
| Bst2UI | CCWGG | 1 cut(s) | 436 |
| Bst4CI | ACNGT | 1 cut(s) | 235 |
| Bst6I | CTCTTC | 1 cut(s) | 323 |
| BstACI | GRCGYC | 1 cut(s) | 218 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 303 |
| BstC8I | GCNNGC | 3 cut(s) | 89, 216, 467 |
| BstDEI | CTNAG | 2 cut(s) | 290, 644 |
| BstKTI | GATC | 2 cut(s) | 44, 450 |
| BstMAI | GTCTC | 5 cut(s) | 145, 241, 489, 497, 653 |
| BstMBI | GATC | 2 cut(s) | 41, 447 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 185, 224, 291, 303, 602, 611 |
| BstNI | CCWGG | 1 cut(s) | 436 |
| BstNSI | RCATGY | 1 cut(s) | 469 |
| BstSCI | CCNGG | 1 cut(s) | 434 |
| BstSLI | GKGCMC | 1 cut(s) | 287 |
| BstV1I | GCAGC | 1 cut(s) | 281 |
| BstV2I | GAAGAC | 1 cut(s) | 418 |
| BsuRI | GGCC | 1 cut(s) | 285 |
| Cac8I | GCNNGC | 3 cut(s) | 89, 216, 467 |
| CaiI | CAGNNNCTG | 1 cut(s) | 651 |
| Cfr10I | RCCGGY | 3 cut(s) | 154, 184, 214 |
| Cfr13I | GGNCC | 2 cut(s) | 283, 284 |
| CseI | GACGC | 3 cut(s) | 65, 207, 325 |
| CspAI | ACCGGT | 1 cut(s) | 154 |
| CviAII | CATG | 2 cut(s) | 298, 466 |
| DdeI | CTNAG | 2 cut(s) | 290, 644 |
| DpnI | GATC | 2 cut(s) | 43, 449 |
| DpnII | GATC | 2 cut(s) | 41, 447 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 159 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 159 |
| Eam1104I | CTCTTC | 1 cut(s) | 323 |
| EarI | CTCTTC | 1 cut(s) | 323 |
| EciI | GGCGGA | 1 cut(s) | 203 |
| Ecl136II | GAGCTC | 1 cut(s) | 432 |
| Eco130I | CCWWGG | 1 cut(s) | 252 |
| Eco24I | GRGCYC | 3 cut(s) | 287, 434, 616 |
| Eco31I | GGTCTC | 2 cut(s) | 145, 489 |
| Eco53kI | GAGCTC | 1 cut(s) | 432 |
| EcoICRI | GAGCTC | 1 cut(s) | 432 |
| EcoO109I | RGGNCCY | 1 cut(s) | 284 |
| EcoRII | CCWGG | 1 cut(s) | 434 |
| EcoT14I | CCWWGG | 1 cut(s) | 252 |
| EcoT38I | GRGCYC | 3 cut(s) | 287, 434, 616 |
| ErhI | CCWWGG | 1 cut(s) | 252 |
| FaeI | CATG | 2 cut(s) | 301, 469 |
| FaqI | GGGAC | 1 cut(s) | 323 |
| FatI | CATG | 2 cut(s) | 297, 465 |
| FblI | GTMKAC | 1 cut(s) | 37 |
| Fnu4HI | GCNGC | 3 cut(s) | 225, 228, 295 |
| FriOI | GRGCYC | 3 cut(s) | 287, 434, 616 |
| Fsp4HI | GCNGC | 3 cut(s) | 225, 228, 295 |
| FspBI | CTAG | 1 cut(s) | 62 |
| GluI | GCNGC | 3 cut(s) | 225, 228, 295 |
| GsaI | CCCAGC | 1 cut(s) | 284 |
| GsuI | CTGGAG | 1 cut(s) | 418 |
| HaeIII | GGCC | 1 cut(s) | 285 |
| HapII | CCGG | 3 cut(s) | 155, 185, 215 |
| HgaI | GACGC | 3 cut(s) | 65, 207, 325 |
| Hin1I | GRCGYC | 1 cut(s) | 218 |
| Hin1II | CATG | 2 cut(s) | 301, 469 |
| HincII | GTYRAC | 1 cut(s) | 38 |
| HindII | GTYRAC | 1 cut(s) | 38 |
| HinfI | GANTC | 3 cut(s) | 65, 323, 473 |
| HpaII | CCGG | 3 cut(s) | 155, 185, 215 |
| Hpy166II | GTNNAC | 2 cut(s) | 16, 38 |
| Hpy188I | TCNGA | 3 cut(s) | 291, 429, 611 |
| Hpy188III | TCNNGA | 4 cut(s) | 45, 169, 199, 371 |
| Hpy8I | GTNNAC | 2 cut(s) | 16, 38 |
| Hpy99I | CGWCG | 3 cut(s) | 42, 81, 223 |
| HpyAV | CCTTC | 5 cut(s) | 116, 121, 283, 323, 364 |
| HpyCH4III | ACNGT | 1 cut(s) | 235 |
| HpyCH4V | TGCA | 5 cut(s) | 87, 268, 297, 494, 589 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 185, 224, 291, 303, 602, 611 |
| HpyF3I | CTNAG | 2 cut(s) | 290, 644 |
| Hsp92I | GRCGYC | 1 cut(s) | 218 |
| Hsp92II | CATG | 2 cut(s) | 301, 469 |
| KroI | GCCGGC | 1 cut(s) | 214 |
| KroNI | GCCGGC | 1 cut(s) | 216 |
| Kzo9I | GATC | 2 cut(s) | 41, 447 |
| LmnI | GCTCC | 3 cut(s) | 190, 397, 437 |
| LpnPI | CCDG | 8 cut(s) | 168, 198, 228, 266, 421, 448, 483, 629 |
| Lsp1109I | GCAGC | 1 cut(s) | 281 |
| MaeI | CTAG | 1 cut(s) | 62 |
| MaeIII | GTNAC | 1 cut(s) | 257 |
| MalI | GATC | 2 cut(s) | 43, 449 |
| MboI | GATC | 2 cut(s) | 41, 447 |
| MboII | GAAGA | 7 cut(s) | 148, 151, 154, 157, 310, 423, 566 |
| MhlI | GDGCHC | 3 cut(s) | 287, 434, 616 |
| MluCI | AATT | 2 cut(s) | 262, 423 |
| MlyI | GAGTC | 1 cut(s) | 317 |
| MnlI | CCTC | 7 cut(s) | 297, 453, 474, 490, 493, 566, 594 |
| MroNI | GCCGGC | 1 cut(s) | 214 |
| MseI | TTAA | 1 cut(s) | 377 |
| MspI | CCGG | 3 cut(s) | 155, 185, 215 |
| MspR9I | CCNGG | 1 cut(s) | 436 |
| Mva1269I | GAATGC | 1 cut(s) | 605 |
| MvaI | CCWGG | 1 cut(s) | 436 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 185, 224, 291, 303, 602, 611 |
| NaeI | GCCGGC | 1 cut(s) | 216 |
| NdeII | GATC | 2 cut(s) | 41, 447 |
| NgoMIV | GCCGGC | 1 cut(s) | 214 |
| NlaIII | CATG | 2 cut(s) | 301, 469 |
| NlaIV | GGNNCC | 3 cut(s) | 192, 285, 419 |
| NspI | RCATGY | 1 cut(s) | 469 |
| PaeI | GCATGC | 1 cut(s) | 469 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 227 |
| PctI | GAATGC | 1 cut(s) | 605 |
| PdiI | GCCGGC | 1 cut(s) | 216 |
| PfeI | GAWTC | 2 cut(s) | 65, 473 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 394, 441 |
| PinAI | ACCGGT | 1 cut(s) | 154 |
| PkrI | GCNGC | 3 cut(s) | 226, 229, 296 |
| PleI | GAGTC | 1 cut(s) | 317 |
| PpsI | GAGTC | 1 cut(s) | 317 |
| Psp124BI | GAGCTC | 1 cut(s) | 434 |
| Psp6I | CCWGG | 1 cut(s) | 434 |
| PspFI | CCCAGC | 1 cut(s) | 280 |
| PspGI | CCWGG | 1 cut(s) | 434 |
| PspN4I | GGNNCC | 3 cut(s) | 192, 285, 419 |
| PspOMI | GGGCCC | 1 cut(s) | 283 |
| PspPI | GGNCC | 2 cut(s) | 283, 284 |
| PstNI | CAGNNNCTG | 1 cut(s) | 651 |
| SacI | GAGCTC | 1 cut(s) | 434 |
| SalI | GTCGAC | 1 cut(s) | 36 |
| SaqAI | TTAA | 1 cut(s) | 377 |
| SatI | GCNGC | 3 cut(s) | 225, 228, 295 |
| Sau3AI | GATC | 2 cut(s) | 41, 447 |
| Sau96I | GGNCC | 2 cut(s) | 283, 284 |
| SchI | GAGTC | 1 cut(s) | 317 |
| ScrFI | CCNGG | 1 cut(s) | 436 |
| SduI | GDGCHC | 3 cut(s) | 287, 434, 616 |
| SetI | ASST | 9 cut(s) | 63, 275, 282, 296, 402, 434, 485, 577, 598 |
| SphI | GCATGC | 1 cut(s) | 469 |
| Sse9I | AATT | 2 cut(s) | 262, 423 |
| SsiI | CCGC | 3 cut(s) | 188, 224, 227 |
| SspMI | CTAG | 1 cut(s) | 62 |
| SstI | GAGCTC | 1 cut(s) | 434 |
| StyD4I | CCNGG | 1 cut(s) | 434 |
| StyI | CCWWGG | 1 cut(s) | 252 |
| TaaI | ACNGT | 1 cut(s) | 235 |
| TaqI | TCGA | 3 cut(s) | 37, 321, 370 |
| TasI | AATT | 2 cut(s) | 262, 423 |
| TauI | GCSGC | 2 cut(s) | 227, 230 |
| TfiI | GAWTC | 2 cut(s) | 65, 473 |
| Tru1I | TTAA | 1 cut(s) | 377 |
| Tru9I | TTAA | 1 cut(s) | 377 |
| TseI | GCWGC | 1 cut(s) | 294 |
| TspDTI | ATGAA | 2 cut(s) | 444, 567 |
| TspGWI | ACGGA | 2 cut(s) | 153, 430 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 394, 441 |
| XceI | RCATGY | 1 cut(s) | 469 |
| XmiI | GTMKAC | 1 cut(s) | 37 |
| XspI | CTAG | 1 cut(s) | 62 |