MATH domain and coiled-coil domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NAP | PF00956 | 129 - 345 | 3.4e-42 | Nucleosome assembly protein (NAP) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 121 |
| AciI | CCGC | 4 cut(s) | 18, 91, 97, 416 |
| AclWI | GGATC | 3 cut(s) | 62, 212, 650 |
| AcsI | RAATTY | 3 cut(s) | 305, 539, 906 |
| AcuI | CTGAAG | 1 cut(s) | 308 |
| AcyI | GRCGYC | 1 cut(s) | 118 |
| AfaI | GTAC | 4 cut(s) | 188, 273, 1028, 1094 |
| AfeI | AGCGCT | 1 cut(s) | 293 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 754 |
| AjnI | CCWGG | 2 cut(s) | 376, 387 |
| AluBI | AGCT | 3 cut(s) | 673, 810, 882 |
| AluI | AGCT | 3 cut(s) | 673, 810, 882 |
| Alw21I | GWGCWC | 1 cut(s) | 456 |
| Alw26I | GTCTC | 1 cut(s) | 1058 |
| AlwI | GGATC | 3 cut(s) | 62, 212, 650 |
| Ama87I | CYCGRG | 1 cut(s) | 674 |
| Aor51HI | AGCGCT | 1 cut(s) | 293 |
| AoxI | GGCC | 1 cut(s) | 1118 |
| ApeKI | GCWGC | 3 cut(s) | 381, 958, 1016 |
| ApoI | RAATTY | 3 cut(s) | 305, 539, 906 |
| AseI | ATTAAT | 1 cut(s) | 369 |
| AspLEI | GCGC | 1 cut(s) | 294 |
| AsuHPI | GGTGA | 3 cut(s) | 585, 758, 956 |
| AsuII | TTCGAA | 1 cut(s) | 994 |
| AvaI | CYCGRG | 1 cut(s) | 674 |
| BanII | GRGCYC | 1 cut(s) | 465 |
| BbsI | GAAGAC | 1 cut(s) | 113 |
| Bbv12I | GWGCWC | 1 cut(s) | 456 |
| BbvI | GCAGC | 3 cut(s) | 368, 945, 1028 |
| BccI | CCATC | 1 cut(s) | 961 |
| BceAI | ACGGC | 2 cut(s) | 26, 31 |
| BciT130I | CCWGG | 2 cut(s) | 378, 389 |
| BcoDI | GTCTC | 1 cut(s) | 1058 |
| BfaI | CTAG | 1 cut(s) | 222 |
| BfoI | RGCGCY | 1 cut(s) | 295 |
| BisI | GCNGC | 3 cut(s) | 382, 959, 1017 |
| BlsI | GCNGC | 3 cut(s) | 383, 960, 1018 |
| Bme1390I | CCNGG | 2 cut(s) | 378, 389 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 754 |
| BmeT110I | CYCGRG | 1 cut(s) | 674 |
| BmrFI | CCNGG | 2 cut(s) | 378, 389 |
| BmrI | ACTGGG | 1 cut(s) | 96 |
| BmsI | GCATC | 1 cut(s) | 130 |
| BmuI | ACTGGG | 1 cut(s) | 96 |
| BpiI | GAAGAC | 1 cut(s) | 113 |
| BpmI | CTGGAG | 1 cut(s) | 516 |
| Bpu14I | TTCGAA | 1 cut(s) | 994 |
| Bsa29I | ATCGAT | 1 cut(s) | 1107 |
| BsaAI | YACGTR | 1 cut(s) | 275 |
| BsaBI | GATNNNNATC | 2 cut(s) | 240, 243 |
| BsaHI | GRCGYC | 1 cut(s) | 118 |
| BsaJI | CCNNGG | 1 cut(s) | 1076 |
| Bse1I | ACTGG | 4 cut(s) | 102, 206, 499, 537 |
| Bse8I | GATNNNNATC | 2 cut(s) | 240, 243 |
| BseBI | CCWGG | 2 cut(s) | 378, 389 |
| BseCI | ATCGAT | 1 cut(s) | 1107 |
| BseDI | CCNNGG | 1 cut(s) | 1076 |
| BseGI | GGATG | 2 cut(s) | 397, 1063 |
| BseJI | GATNNNNATC | 2 cut(s) | 240, 243 |
| BseNI | ACTGG | 4 cut(s) | 102, 206, 499, 537 |
| BseRI | GAGGAG | 5 cut(s) | 67, 461, 464, 513, 1055 |
| BseXI | GCAGC | 3 cut(s) | 368, 945, 1028 |
| BsgI | GTGCAG | 1 cut(s) | 1073 |
| BshFI | GGCC | 1 cut(s) | 1120 |
| BshVI | ATCGAT | 1 cut(s) | 1107 |
| BsiHKAI | GWGCWC | 1 cut(s) | 456 |
| BsiHKCI | CYCGRG | 1 cut(s) | 674 |
| BslFI | GGGAC | 4 cut(s) | 73, 116, 543, 793 |
| BsmAI | GTCTC | 1 cut(s) | 1058 |
| BsmFI | GGGAC | 4 cut(s) | 73, 116, 543, 793 |
| BsnI | GGCC | 1 cut(s) | 1120 |
| BsoBI | CYCGRG | 1 cut(s) | 674 |
| Bsp119I | TTCGAA | 1 cut(s) | 994 |
| Bsp1286I | GDGCHC | 2 cut(s) | 456, 465 |
| Bsp143I | GATC | 7 cut(s) | 67, 162, 178, 204, 283, 655, 1126 |
| BspACI | CCGC | 4 cut(s) | 18, 91, 97, 416 |
| BspANI | GGCC | 1 cut(s) | 1120 |
| BspDI | ATCGAT | 1 cut(s) | 1107 |
| BspPI | GGATC | 3 cut(s) | 62, 212, 650 |
| BspT104I | TTCGAA | 1 cut(s) | 994 |
| BsrI | ACTGG | 4 cut(s) | 102, 206, 499, 537 |
| BssECI | CCNNGG | 1 cut(s) | 1076 |
| BssMI | GATC | 7 cut(s) | 67, 162, 178, 204, 283, 655, 1126 |
| BssNI | GRCGYC | 1 cut(s) | 118 |
| BssT1I | CCWWGG | 1 cut(s) | 1076 |
| Bst2UI | CCWGG | 2 cut(s) | 378, 389 |
| Bst4CI | ACNGT | 2 cut(s) | 191, 266 |
| Bst6I | CTCTTC | 1 cut(s) | 1032 |
| BstACI | GRCGYC | 1 cut(s) | 118 |
| BstBAI | YACGTR | 1 cut(s) | 275 |
| BstBI | TTCGAA | 1 cut(s) | 994 |
| BstF5I | GGATG | 2 cut(s) | 397, 1063 |
| BstH2I | RGCGCY | 1 cut(s) | 295 |
| BstHHI | GCGC | 1 cut(s) | 294 |
| BstKTI | GATC | 7 cut(s) | 70, 165, 181, 207, 286, 658, 1129 |
| BstMAI | GTCTC | 1 cut(s) | 1058 |
| BstMBI | GATC | 7 cut(s) | 67, 162, 178, 204, 283, 655, 1126 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 460, 560 |
| BstNI | CCWGG | 2 cut(s) | 378, 389 |
| BstNSI | RCATGY | 1 cut(s) | 1149 |
| BstSCI | CCNGG | 2 cut(s) | 376, 387 |
| BstV1I | GCAGC | 3 cut(s) | 368, 945, 1028 |
| BstV2I | GAAGAC | 1 cut(s) | 113 |
| BstX2I | RGATCY | 1 cut(s) | 204 |
| BstYI | RGATCY | 1 cut(s) | 204 |
| Bsu15I | ATCGAT | 1 cut(s) | 1107 |
| BsuRI | GGCC | 1 cut(s) | 1120 |
| BsuTUI | ATCGAT | 1 cut(s) | 1107 |
| BtsCI | GGATG | 2 cut(s) | 397, 1063 |
| BtsIMutI | CAGTG | 1 cut(s) | 627 |
| CfoI | GCGC | 1 cut(s) | 294 |
| ClaI | ATCGAT | 1 cut(s) | 1107 |
| Csp6I | GTAC | 4 cut(s) | 187, 272, 1027, 1093 |
| CviAII | CATG | 6 cut(s) | 212, 602, 1013, 1034, 1130, 1146 |
| CviQI | GTAC | 4 cut(s) | 187, 272, 1027, 1093 |
| DpnI | GATC | 7 cut(s) | 69, 164, 180, 206, 285, 657, 1128 |
| DpnII | GATC | 7 cut(s) | 67, 162, 178, 204, 283, 655, 1126 |
| DraI | TTTAAA | 1 cut(s) | 709 |
| DriI | GACNNNNNGTC | 1 cut(s) | 754 |
| Eam1104I | CTCTTC | 1 cut(s) | 1032 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 754 |
| EarI | CTCTTC | 1 cut(s) | 1032 |
| Eco130I | CCWWGG | 1 cut(s) | 1076 |
| Eco24I | GRGCYC | 1 cut(s) | 465 |
| Eco32I | GATATC | 1 cut(s) | 634 |
| Eco47III | AGCGCT | 1 cut(s) | 293 |
| Eco57I | CTGAAG | 1 cut(s) | 308 |
| Eco88I | CYCGRG | 1 cut(s) | 674 |
| EcoRII | CCWGG | 2 cut(s) | 376, 387 |
| EcoRV | GATATC | 1 cut(s) | 634 |
| EcoT14I | CCWWGG | 1 cut(s) | 1076 |
| EcoT38I | GRGCYC | 1 cut(s) | 465 |
| ErhI | CCWWGG | 1 cut(s) | 1076 |
| FaeI | CATG | 6 cut(s) | 215, 605, 1016, 1037, 1133, 1149 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 794, 826 |
| FaqI | GGGAC | 4 cut(s) | 73, 116, 543, 793 |
| FatI | CATG | 6 cut(s) | 211, 601, 1012, 1033, 1129, 1145 |
| FauI | CCCGC | 1 cut(s) | 98 |
| Fnu4HI | GCNGC | 3 cut(s) | 382, 959, 1017 |
| FokI | GGATG | 2 cut(s) | 404, 1070 |
| FriOI | GRGCYC | 1 cut(s) | 465 |
| Fsp4HI | GCNGC | 3 cut(s) | 382, 959, 1017 |
| FspBI | CTAG | 1 cut(s) | 222 |
| GlaI | GCGC | 1 cut(s) | 293 |
| GluI | GCNGC | 3 cut(s) | 382, 959, 1017 |
| GsuI | CTGGAG | 1 cut(s) | 516 |
| HaeII | RGCGCY | 1 cut(s) | 295 |
| HaeIII | GGCC | 1 cut(s) | 1120 |
| HhaI | GCGC | 1 cut(s) | 294 |
| Hin1I | GRCGYC | 1 cut(s) | 118 |
| Hin1II | CATG | 6 cut(s) | 215, 605, 1016, 1037, 1133, 1149 |
| Hin6I | GCGC | 1 cut(s) | 292 |
| HinP1I | GCGC | 1 cut(s) | 292 |
| HindIII | AAGCTT | 2 cut(s) | 808, 880 |
| HinfI | GANTC | 5 cut(s) | 74, 110, 590, 666, 938 |
| HphI | GGTGA | 3 cut(s) | 585, 758, 956 |
| Hpy166II | GTNNAC | 1 cut(s) | 947 |
| Hpy188I | TCNGA | 2 cut(s) | 288, 660 |
| Hpy188III | TCNNGA | 7 cut(s) | 59, 71, 114, 197, 259, 332, 692 |
| Hpy8I | GTNNAC | 1 cut(s) | 947 |
| Hpy99I | CGWCG | 2 cut(s) | 56, 120 |
| HpyAV | CCTTC | 4 cut(s) | 58, 475, 553, 1079 |
| HpyCH4III | ACNGT | 2 cut(s) | 191, 266 |
| HpyCH4IV | ACGT | 3 cut(s) | 54, 118, 274 |
| HpyCH4V | TGCA | 4 cut(s) | 841, 1016, 1054, 1149 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 460, 560 |
| HpySE526I | ACGT | 3 cut(s) | 54, 118, 274 |
| Hsp92I | GRCGYC | 1 cut(s) | 118 |
| Hsp92II | CATG | 6 cut(s) | 215, 605, 1016, 1037, 1133, 1149 |
| HspAI | GCGC | 1 cut(s) | 292 |
| Kzo9I | GATC | 7 cut(s) | 67, 162, 178, 204, 283, 655, 1126 |
| LmnI | GCTCC | 1 cut(s) | 451 |
| Lsp1109I | GCAGC | 3 cut(s) | 368, 945, 1028 |
| LweI | GCATC | 1 cut(s) | 130 |
| MaeI | CTAG | 1 cut(s) | 222 |
| MaeII | ACGT | 3 cut(s) | 54, 118, 274 |
| MaeIII | GTNAC | 3 cut(s) | 490, 641, 746 |
| MalI | GATC | 7 cut(s) | 69, 164, 180, 206, 285, 657, 1128 |
| MboI | GATC | 7 cut(s) | 67, 162, 178, 204, 283, 655, 1126 |
| MboII | GAAGA | 7 cut(s) | 113, 116, 368, 877, 947, 1049, 1136 |
| MfeI | CAATTG | 1 cut(s) | 774 |
| MflI | RGATCY | 1 cut(s) | 204 |
| MhlI | GDGCHC | 2 cut(s) | 456, 465 |
| MluCI | AATT | 9 cut(s) | 279, 305, 516, 539, 774, 786, 906, 978, 1045 |
| MlyI | GAGTC | 2 cut(s) | 68, 104 |
| MseI | TTAA | 5 cut(s) | 312, 369, 519, 708, 930 |
| MslI | CAYNNNNRTG | 1 cut(s) | 216 |
| MspR9I | CCNGG | 2 cut(s) | 378, 389 |
| MunI | CAATTG | 1 cut(s) | 774 |
| MvaI | CCWGG | 2 cut(s) | 378, 389 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 460, 560 |
| NdeII | GATC | 7 cut(s) | 67, 162, 178, 204, 283, 655, 1126 |
| NlaIII | CATG | 6 cut(s) | 215, 605, 1016, 1037, 1133, 1149 |
| NmuCI | GTSAC | 2 cut(s) | 641, 746 |
| NspI | RCATGY | 1 cut(s) | 1149 |
| NspV | TTCGAA | 1 cut(s) | 994 |
| PaeR7I | CTCGAG | 1 cut(s) | 674 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 57, 187 |
| PfeI | GAWTC | 3 cut(s) | 590, 666, 938 |
| PkrI | GCNGC | 3 cut(s) | 383, 960, 1018 |
| PleI | GAGTC | 2 cut(s) | 68, 104 |
| PpsI | GAGTC | 2 cut(s) | 68, 104 |
| Ppu21I | YACGTR | 1 cut(s) | 275 |
| PshBI | ATTAAT | 1 cut(s) | 369 |
| Psp6I | CCWGG | 2 cut(s) | 376, 387 |
| PspGI | CCWGG | 2 cut(s) | 376, 387 |
| PspXI | VCTCGAGB | 1 cut(s) | 674 |
| PsuI | RGATCY | 1 cut(s) | 204 |
| RsaI | GTAC | 4 cut(s) | 188, 273, 1028, 1094 |
| RsaNI | GTAC | 4 cut(s) | 187, 272, 1027, 1093 |
| RseI | CAYNNNNRTG | 1 cut(s) | 216 |
| SaqAI | TTAA | 5 cut(s) | 312, 369, 519, 708, 930 |
| SatI | GCNGC | 3 cut(s) | 382, 959, 1017 |
| Sau3AI | GATC | 7 cut(s) | 67, 162, 178, 204, 283, 655, 1126 |
| SchI | GAGTC | 2 cut(s) | 68, 104 |
| ScrFI | CCNGG | 2 cut(s) | 378, 389 |
| SduI | GDGCHC | 2 cut(s) | 456, 465 |
| SfaNI | GCATC | 1 cut(s) | 130 |
| Sfr274I | CTCGAG | 1 cut(s) | 674 |
| SfuI | TTCGAA | 1 cut(s) | 994 |
| SlaI | CTCGAG | 1 cut(s) | 674 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 216 |
| SmlI | CTYRAG | 1 cut(s) | 674 |
| SmoI | CTYRAG | 1 cut(s) | 674 |
| Sse9I | AATT | 9 cut(s) | 279, 305, 516, 539, 774, 786, 906, 978, 1045 |
| SsiI | CCGC | 4 cut(s) | 18, 91, 97, 416 |
| SspMI | CTAG | 1 cut(s) | 222 |
| StyD4I | CCNGG | 2 cut(s) | 376, 387 |
| StyI | CCWWGG | 1 cut(s) | 1076 |
| TaaI | ACNGT | 2 cut(s) | 191, 266 |
| TaiI | ACGT | 3 cut(s) | 57, 121, 277 |
| TaqI | TCGA | 8 cut(s) | 51, 153, 165, 247, 675, 877, 994, 1107 |
| TasI | AATT | 9 cut(s) | 279, 305, 516, 539, 774, 786, 906, 978, 1045 |
| TfiI | GAWTC | 3 cut(s) | 590, 666, 938 |
| Tru1I | TTAA | 5 cut(s) | 312, 369, 519, 708, 930 |
| Tru9I | TTAA | 5 cut(s) | 312, 369, 519, 708, 930 |
| TscAI | CASTG | 1 cut(s) | 634 |
| TseFI | GTSAC | 2 cut(s) | 641, 746 |
| TseI | GCWGC | 3 cut(s) | 381, 958, 1016 |
| Tsp45I | GTSAC | 2 cut(s) | 641, 746 |
| TspDTI | ATGAA | 5 cut(s) | 522, 729, 927, 948, 1050 |
| TspGWI | ACGGA | 2 cut(s) | 75, 797 |
| TspRI | CASTG | 1 cut(s) | 634 |
| VspI | ATTAAT | 1 cut(s) | 369 |
| XapI | RAATTY | 3 cut(s) | 305, 539, 906 |
| XceI | RCATGY | 1 cut(s) | 1149 |
| XhoI | CTCGAG | 1 cut(s) | 674 |
| XspI | CTAG | 1 cut(s) | 222 |
| ZraI | GACGTC | 1 cut(s) | 119 |