Rmu_sc0021997.1_g000004

ubiquitinyl hydrolase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021997.1
OG0000025
Physical Location & Seq
Reverse (-)
23659 .. 24422
764 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0021997.1_g000004.1.cds

Sequence Viewer

Length: 684 bp
atggtaatgggtacattgaaggaaaaagagaggcagggaccttcaaatgtgcagcctgtgaatgttccagattttttcacaagatgggagacaccaagttgtgaacaggcgcctgccaactaccacagtgcagcaagttctgaacaaatttgcaccgagcttcctaacatttccattgccaaggaatctgaggttgtgtcctccacatcagctgatgagctcatggatttcaggggtttagccaaaatacaaaaagcttttgttccgctgttagatgaagtttgttcatgtcactcttctctcattgaatgccaaatgaagcaaagtcccatgtttatcgagtgggcattcactgccttgggccgagttctacattttttgaaaacaaaaaaggttaaggatatgacagatgatgtctgtacagacctagaacttctatggaaagagctccagatcttcaaatttgacttggcttggctgaagcctcatgttcaaagagctttgcatatgaataagttggtcaaaagggcaggacaagtagagatattgagaaaggatgtggttgatttggagattgaaaacaagaggctaatggctaagctcgaggtagcaagaagagatttggaaaaggctgaaggtattgaggagatgaacatggataaggagctaggttatgggggttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000982 GO:0001077 GO:0001101 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003824 GO:0004843 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006508 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0016787 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0019783 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0032870 GO:0034641 GO:0034645 GO:0034654 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0101005 GO:0140096 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04068 ko05168 ko05169 ko05203 map04068 map05168 map05169 map05203
Pfam Domains
Protein Families
Ank_2 CG-1 IQ MATH UCH USP7_C2 USP7_ICP0_bdg

Protein Analysis

227

Amino Acids

25.89

Weight (kDa)

5.51

Isoelectric Point (pI)

58.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000025)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31370 AT1G31380 AT1G31390 AT1G31400 AT2G01790 AT2G05400 AT2G05400 AT2G05400 AT2G05410 AT2G05410 AT2G05420 AT2G05430 AT2G42455 AT2G42460 AT2G42465 AT2G42470 AT2G42475 AT2G42480 AT3G27040 AT3G29580 AT3G44790 AT3G44800 AT3G44805 AT3G58200 AT3G58210 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58230 AT3G58240 AT3G58250 AT3G58260 AT3G58270 AT3G58270 AT3G58270 AT3G58280 AT3G58290 AT3G58290 AT3G58290 AT3G58300 AT3G58320 AT3G58330 AT3G58340 AT3G58340 AT3G58350 AT3G58350 AT3G58360 AT3G58370 AT3G58380 AT3G58400 AT3G58410 AT3G58410 AT3G58430 AT3G58430 AT3G58440 AT5G03550
fragaria_vesca FvH4_2g00084 FvH4_2g15701 FvH4_2g24334 FvH4_3g23322 FvH4_3g23322 FvH4_3g23322 FvH4_3g23482 FvH4_3g23482 FvH4_3g23482 FvH4_3g23491 FvH4_3g23492 FvH4_3g23510 FvH4_3g23520 FvH4_3g23520 FvH4_3g23520 FvH4_3g23580 FvH4_3g38842 FvH4_4g10396 FvH4_5g29370 FvH4_5g32130 FvH4_7g04570 FvH4_7g04571 FvH4_7g04741 FvH4_7g04741 FvH4_7g04750 FvH4_7g04750 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04770 FvH4_7g04770 FvH4_7g04770
malus_domestica MD00G1065000.v1.1 MD00G1065300.v1.1 MD02G1267400.v1.1 MD02G1267600.v1.1 MD02G1267700.v1.1 MD02G1267800.v1.1 MD02G1268100.v1.1 MD02G1268300.v1.1 MD02G1268400.v1.1 MD02G1268500.v1.1 MD03G1193600.v1.1 MD05G1071400.v1.1 MD07G1051000.v1.1 MD07G1051100.v1.1 MD07G1051200.v1.1 MD07G1051300.v1.1 MD07G1051500.v1.1 MD07G1051700.v1.1 MD07G1051800.v1.1 MD07G1085400.v1.1 MD07G1085500.v1.1 MD11G1177200.v1.1 MD11G1209800.v1.1 MD11G1209900.v1.1 MD11G1210000.v1.1 MD12G1048100.v1.1 MD12G1048600.v1.1 MD14G1046700.v1.1 MD14G1047400.v1.1
prunus_persica Prupe.2G051200_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052700_v2.0.a1 Prupe.2G052800_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G053100_v2.0.a1 Prupe.2G053300_v2.0.a1 Prupe.2G054800_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.4G223300_v2.0.a1 Prupe.4G223300_v2.0.a1
pyrus_communis pycom01g04720 pycom02g22950 pycom02g22960 pycom02g22970 pycom02g22990 pycom02g23000 pycom02g23010 pycom03g14600 pycom03g14610 pycom05g06150 pycom07g03820 pycom07g03830 pycom07g03850 pycom07g03860 pycom07g03880 pycom07g03890 pycom07g03900 pycom07g04000 pycom07g04010 pycom11g18540 pycom11g18560 pycom12g04190 pycom17g19100
rosa_chinensis RchiOBHm_Chr0c19g0500051 RchiOBHm_Chr1g0330011 RchiOBHm_Chr1g0330031 RchiOBHm_Chr1g0330041 RchiOBHm_Chr1g0330121 RchiOBHm_Chr1g0330141 RchiOBHm_Chr1g0330151 RchiOBHm_Chr1g0330181 RchiOBHm_Chr1g0330191 RchiOBHm_Chr1g0330201 RchiOBHm_Chr1g0330211 RchiOBHm_Chr1g0330221 RchiOBHm_Chr1g0367471 RchiOBHm_Chr2g0113311 RchiOBHm_Chr2g0148281 RchiOBHm_Chr4g0400061 RchiOBHm_Chr4g0437571 RchiOBHm_Chr5g0041361 RchiOBHm_Chr5g0041421 RchiOBHm_Chr5g0041481 RchiOBHm_Chr5g0041491 RchiOBHm_Chr5g0041501 RchiOBHm_Chr5g0041511 RchiOBHm_Chr5g0042491 RchiOBHm_Chr5g0042501 RchiOBHm_Chr6g0263551 RchiOBHm_Chr6g0286221 RchiOBHm_Chr7g0228171 RchiOBHm_Chr7g0231391 RchiOBHm_Chr7g0231401
rosa_laevigata RLG00000000870 RLG00000001420 RLG00000001582 RLG00000001602 RLG00000001700 RLG00000002476 RLG00000005787 RLG00000007689 RLG00000008446 RLG00000008811 RLG00000008812 RLG00000009013 RLG00000009942 RLG00000012752 RLG00000013511 RLG00000014053 RLG00000015257 RLG00000015258 RLG00000016149 RLG00000016691 RLG00000018661 RLG00000018662 RLG00000020991 RLG00000020992 RLG00000020993 RLG00000027309 RLG00000028568 RLG00000029119 RLG00000029371 RLG00000029563 RLG00000029818 RLG00000029819 RLG00000029821 RLG00000029822 RLG00000029824 RLG00000029827 RLG00000029828 RLG00000029829 RLG00000029841 RLG00000029843 RLG00000032676 RLG00000033366 RLG00000033367 RLG00000034023 RLG00000034066 RLG00000034072 RLG00000034073 RLG00000034074 RLG00000034130 RLG00000034133 RLG00000035487 RLG00000035488 RLG00000035793
rosa_multiflora Rmu_co8241405.1_g000001 Rmu_co8251033.1_g000001 Rmu_co8297611.1_g000001 Rmu_co8346639.1_g000001 Rmu_co8405917.1_g000001 Rmu_sc0000045.1_g000044 Rmu_sc0000061.1_g000032 Rmu_sc0000068.1_g000021 Rmu_sc0000068.1_g000022 Rmu_sc0000415.1_g000001 Rmu_sc0000499.1_g000003 Rmu_sc0000594.1_g000020 Rmu_sc0000673.1_g000007 Rmu_sc0000908.1_g000004 Rmu_sc0001123.1_g000013 Rmu_sc0001123.1_g000014 Rmu_sc0001167.1_g000026 Rmu_sc0001598.1_g000011 Rmu_sc0001696.1_g000003 Rmu_sc0001696.1_g000011 Rmu_sc0001696.1_g000019 Rmu_sc0001696.1_g000020 Rmu_sc0003007.1_g000016 Rmu_sc0003007.1_g000029 Rmu_sc0003051.1_g000010 Rmu_sc0003396.1_g000029 Rmu_sc0004798.1_g000020 Rmu_sc0005375.1_g000016 Rmu_sc0005375.1_g000017 Rmu_sc0005659.1_g000033 Rmu_sc0005659.1_g000034 Rmu_sc0006311.1_g000011 Rmu_sc0008249.1_g000002 Rmu_sc0008249.1_g000018 Rmu_sc0008600.1_g000014 Rmu_sc0009365.1_g000010 Rmu_sc0009365.1_g000022 Rmu_sc0009365.1_g000025 Rmu_sc0011112.1_g000008 Rmu_sc0011112.1_g000009 Rmu_sc0012031.1_g000020 Rmu_sc0013350.1_g000014 Rmu_sc0020359.1_g000004 Rmu_sc0021997.1_g000003 Rmu_sc0021997.1_g000004 Rmu_sc0023610.1_g000002 Rmu_sc0023611.1_g000001 Rmu_sc0028894.1_g000001 Rmu_sc0031050.1_g000001 Rmu_sc0041109.1_g000001 Rmu_ssc0000087.1_g000050 Rmu_ssc0000087.1_g000051 Rmu_ssc0000087.1_g000052 Rmu_ssc0000295.1_g000058 Rmu_ssc0000343.1_g000031 Rmu_ssc0000423.1_g000015 Rmu_ssc0000470.1_g000005 Rmu_ssc0000470.1_g000006
rosa_roxburghii Rroxscaffold_1G00005900 Rroxscaffold_1G00005910 Rroxscaffold_1G00012600 Rroxscaffold_1G00016860 Rroxscaffold_1G00032110 Rroxscaffold_1G00038140 Rroxscaffold_1G00038200 Rroxscaffold_1G00039020 Rroxscaffold_1G00039030 Rroxscaffold_1G00039080 Rroxscaffold_1G00039090 Rroxscaffold_1G00039270 Rroxscaffold_2G00097120 Rroxscaffold_2G00097130 Rroxscaffold_2G00137700 Rroxscaffold_2G00151740 Rroxscaffold_2G00151750 Rroxscaffold_3G00224160 Rroxscaffold_3G00224170 Rroxscaffold_3G00226080 Rroxscaffold_3G00226090 Rroxscaffold_3G00229350 Rroxscaffold_3G00231340 Rroxscaffold_4G00291390 Rroxscaffold_4G00316220 Rroxscaffold_4G00316230 Rroxscaffold_4G00320040 Rroxscaffold_4G00320050 Rroxscaffold_4G00320120 Rroxscaffold_4G00320140 Rroxscaffold_4G00320180 Rroxscaffold_4G00320270 Rroxscaffold_4G00320280 Rroxscaffold_4G00320290 Rroxscaffold_4G00320430 Rroxscaffold_4G00321910 Rroxscaffold_5G00348730 Rroxscaffold_5G00355020 Rroxscaffold_5G00355080 Rroxscaffold_5G00357490 Rroxscaffold_5G00376500 Rroxscaffold_5G00376510 Rroxscaffold_7G00179590 Rroxscaffold_7G00179600 Rroxscaffold_7G00198610
rosa_rugosa Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0086300 Rorug01G0086500 Rorug01G0087000 Rorug01G0087100 Rorug01G0087600 Rorug01G0087700 Rorug01G0087800 Rorug01G0087800 Rorug01G0302500 Rorug02G0249300 Rorug02G0249300 Rorug02G0249400 Rorug03G0189000 Rorug04G0181800 Rorug04G0283800.1 Rorug04G0283900.1 Rorug05G0043500 Rorug05G0191800 Rorug05G0191900 Rorug05G0192800 Rorug05G0192900 Rorug05G0193000 Rorug05G0201000 Rorug05G0201100 Rorug06G0173900 Rorug06G0173900 Rorug07G0009800 Rorug07G0246300.1 Rorug07G0246400
rosa_samantha Rh1AG103600 Rh1AG104800 Rh1AG105200 Rh1AG105300 Rh1AG105500 Rh1BG082000 Rh1BG082200 Rh1BG082300 Rh1BG082900 Rh1BG083000 Rh1BG083300 Rh1BG083500 Rh1BG083600 Rh1BG083800 Rh1BG083900 Rh1BG084000 Rh1BG084100 Rh1BG084200 Rh1BG092200 Rh1BG275300 Rh1CG098700 Rh1CG098800 Rh1CG100300 Rh1CG100400 Rh1CG100600 Rh1CG100900 Rh1CG101000 Rh1CG101700 Rh1DG066900 Rh1DG067000 Rh1DG106000 Rh1DG107600 Rh1DG107800 Rh1DG108100 Rh1DG108200 Rh1DG108600 Rh1DG108700 Rh1DG108900 Rh1DG109000 Rh1DG109100 Rh1DG109300 Rh1DG109400 Rh1DG109500 Rh1DG109700 Rh1DG109800 Rh1DG173900 Rh2AG270300 Rh2AG398900 Rh2CG245000 Rh2CG260700 Rh2CG278600 Rh2CG342400 Rh2CG385700 Rh3DG197200 Rh3DG197300 Rh4AG015100 Rh4BG347400 Rh4DG360400 Rh5AG278600 Rh5AG278700 Rh5AG286900 Rh5AG287000 Rh5BG282900 Rh5BG283000 Rh5BG283100 Rh5BG291400 Rh5CG314900 Rh5CG315100 Rh5CG315400 Rh5CG315700 Rh5CG315900 Rh5CG316000 Rh5CG323600 Rh5CG323700 Rh5DG291400 Rh5DG292300 Rh5DG292500 Rh5DG292700 Rh5DG292800 Rh5DG292900 Rh5DG301100 Rh5DG301200 Rh5DG301400 Rh5DG350900 Rh6BG407700 Rh6CG294900 Rh6DG286900 Rh7AG400400 Rh7AG420600 Rh7BG381700 Rh7BG395000 Rh7CG418600 Rh7CG440700 Rh7DG396500 Rh7DG413200
rosa_wichuraiana Rw1G003300 Rw1G008240 Rw1G008250 Rw1G008270 Rw1G008330 Rw1G008340 Rw1G008350 Rw1G008360 Rw1G008370 Rw1G008810 Rw1G021140 Rw3G020650 Rw5G026150 Rw5G026200 Rw5G026240 Rw5G026250 Rw5G026650 Rw5G030820 Rw7G006630 Rw7G030060 Rw7G034700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 109
AciI CCGC 1 cut(s) 266
AcsI RAATTY 2 cut(s) 147, 461
AcuI CTGAAG 2 cut(s) 500, 654
AcyI GRCGYC 1 cut(s) 110
AfaI GTAC 2 cut(s) 13, 421
AgsI TTSAA 7 cut(s) 19, 45, 308, 382, 460, 494, 578
AluBI AGCT 8 cut(s) 160, 212, 220, 257, 448, 500, 601, 667
AluI AGCT 8 cut(s) 160, 212, 220, 257, 448, 500, 601, 667
Alw21I GWGCWC 2 cut(s) 222, 450
Alw26I GTCTC 1 cut(s) 83
Ama87I CYCGRG 1 cut(s) 602
AoxI GGCC 1 cut(s) 361
ApeKI GCWGC 2 cut(s) 52, 131
ApoI RAATTY 2 cut(s) 147, 461
AspLEI GCGC 1 cut(s) 112
AspS9I GGNCC 2 cut(s) 38, 361
AvaI CYCGRG 1 cut(s) 602
AvaII GGWCC 1 cut(s) 38
BanI GGYRCC 1 cut(s) 109
BanII GRGCYC 2 cut(s) 222, 450
Bbv12I GWGCWC 2 cut(s) 222, 450
BbvI GCAGC 2 cut(s) 64, 143
BccI CCATC 1 cut(s) 78
BcoDI GTCTC 1 cut(s) 83
BfaI CTAG 2 cut(s) 428, 668
BfoI RGCGCY 1 cut(s) 113
BglII AGATCT 1 cut(s) 453
BisI GCNGC 2 cut(s) 53, 132
BlpI GCTNAGC 1 cut(s) 597
BlsI GCNGC 2 cut(s) 54, 133
Bme18I GGWCC 1 cut(s) 38
BmeT110I CYCGRG 1 cut(s) 602
BmgT120I GGNCC 2 cut(s) 38, 361
BmiI GGNNCC 2 cut(s) 39, 111
BpmI CTGGAG 1 cut(s) 434
Bpu1102I GCTNAGC 1 cut(s) 597
BsaHI GRCGYC 1 cut(s) 110
BsaJI CCNNGG 2 cut(s) 180, 357
Bse3DI GCAATG 1 cut(s) 174
BseDI CCNNGG 2 cut(s) 180, 357
BseGI GGATG 1 cut(s) 562
BseMI GCAATG 1 cut(s) 174
BseMII CTCAG 1 cut(s) 180
BseRI GAGGAG 1 cut(s) 659
BseXI GCAGC 2 cut(s) 64, 143
BsgI GTGCAG 2 cut(s) 71, 150
BshFI GGCC 1 cut(s) 363
BshNI GGYRCC 1 cut(s) 109
BsiHKAI GWGCWC 2 cut(s) 222, 450
BsiHKCI CYCGRG 1 cut(s) 602
BslFI GGGAC 2 cut(s) 51, 312
BsmAI GTCTC 1 cut(s) 83
BsmFI GGGAC 2 cut(s) 51, 312
BsmI GAATGC 2 cut(s) 314, 347
BsnI GGCC 1 cut(s) 363
BsoBI CYCGRG 1 cut(s) 602
Bsp1286I GDGCHC 2 cut(s) 222, 450
Bsp1407I TGTACA 1 cut(s) 419
Bsp143I GATC 1 cut(s) 453
Bsp1720I GCTNAGC 1 cut(s) 597
BspACI CCGC 1 cut(s) 266
BspANI GGCC 1 cut(s) 363
BspCNI CTCAG 1 cut(s) 181
BspLI GGNNCC 2 cut(s) 39, 111
BspT107I GGYRCC 1 cut(s) 109
BsrDI GCAATG 1 cut(s) 174
BsrGI TGTACA 1 cut(s) 419
BssECI CCNNGG 2 cut(s) 180, 357
BssMI GATC 1 cut(s) 453
BssNI GRCGYC 1 cut(s) 110
BssT1I CCWWGG 2 cut(s) 180, 357
Bst4CI ACNGT 1 cut(s) 128
Bst6I CTCTTC 2 cut(s) 301, 610
BstACI GRCGYC 1 cut(s) 110
BstAPI GCANNNNNTGC 1 cut(s) 353
BstAUI TGTACA 1 cut(s) 419
BstC8I GCNNGC 1 cut(s) 114
BstDEI CTNAG 2 cut(s) 189, 597
BstF5I GGATG 1 cut(s) 562
BstH2I RGCGCY 1 cut(s) 113
BstHHI GCGC 1 cut(s) 112
BstKTI GATC 1 cut(s) 456
BstMAI GTCTC 1 cut(s) 83
BstMBI GATC 1 cut(s) 453
BstMWI GCNNNNNNNGC 1 cut(s) 353
BstV1I GCAGC 2 cut(s) 64, 143
BstX2I RGATCY 1 cut(s) 453
BstYI RGATCY 1 cut(s) 453
BsuRI GGCC 1 cut(s) 363
BtsCI GGATG 1 cut(s) 562
BtsI GCAGTG 1 cut(s) 351
BtsIMutI CAGTG 2 cut(s) 133, 351
Cac8I GCNNGC 1 cut(s) 114
CfoI GCGC 1 cut(s) 112
Cfr13I GGNCC 2 cut(s) 38, 361
Csp6I GTAC 2 cut(s) 12, 420
CviAII CATG 5 cut(s) 223, 288, 331, 488, 655
CviQI GTAC 2 cut(s) 12, 420
DdeI CTNAG 2 cut(s) 189, 597
DinI GGCGCC 1 cut(s) 111
DpnI GATC 1 cut(s) 455
DpnII GATC 1 cut(s) 453
Eam1104I CTCTTC 2 cut(s) 301, 610
EarI CTCTTC 2 cut(s) 301, 610
Ecl136II GAGCTC 2 cut(s) 220, 448
Eco130I CCWWGG 2 cut(s) 180, 357
Eco24I GRGCYC 2 cut(s) 222, 450
Eco47I GGWCC 1 cut(s) 38
Eco53kI GAGCTC 2 cut(s) 220, 448
Eco57I CTGAAG 2 cut(s) 500, 654
Eco88I CYCGRG 1 cut(s) 602
EcoICRI GAGCTC 2 cut(s) 220, 448
EcoO109I RGGNCCY 1 cut(s) 38
EcoT14I CCWWGG 2 cut(s) 180, 357
EcoT38I GRGCYC 2 cut(s) 222, 450
EgeI GGCGCC 1 cut(s) 111
EheI GGCGCC 1 cut(s) 111
ErhI CCWWGG 2 cut(s) 180, 357
FaeI CATG 5 cut(s) 226, 291, 334, 491, 658
FaqI GGGAC 2 cut(s) 51, 312
FatI CATG 5 cut(s) 222, 287, 330, 487, 654
FauNDI CATATG 1 cut(s) 507
Fnu4HI GCNGC 2 cut(s) 53, 132
FokI GGATG 1 cut(s) 569
FriOI GRGCYC 2 cut(s) 222, 450
Fsp4HI GCNGC 2 cut(s) 53, 132
FspBI CTAG 2 cut(s) 428, 668
GlaI GCGC 1 cut(s) 111
GluI GCNGC 2 cut(s) 53, 132
GsuI CTGGAG 1 cut(s) 434
HaeII RGCGCY 1 cut(s) 113
HaeIII GGCC 1 cut(s) 363
HhaI GCGC 1 cut(s) 112
Hin1I GRCGYC 1 cut(s) 110
Hin1II CATG 5 cut(s) 226, 291, 334, 491, 658
Hin6I GCGC 1 cut(s) 110
HinP1I GCGC 1 cut(s) 110
HindIII AAGCTT 1 cut(s) 255
HinfI GANTC 1 cut(s) 185
Hpy166II GTNNAC 1 cut(s) 104
Hpy188I TCNGA 2 cut(s) 142, 190
Hpy188III TCNNGA 2 cut(s) 68, 451
Hpy8I GTNNAC 1 cut(s) 104
HpyAV CCTTC 3 cut(s) 13, 51, 629
HpyCH4III ACNGT 1 cut(s) 128
HpyCH4V TGCA 4 cut(s) 52, 131, 153, 505
HpyF10VI GCNNNNNNNGC 1 cut(s) 353
HpyF3I CTNAG 2 cut(s) 189, 597
Hsp92I GRCGYC 1 cut(s) 110
Hsp92II CATG 5 cut(s) 226, 291, 334, 491, 658
HspAI GCGC 1 cut(s) 110
KasI GGCGCC 1 cut(s) 109
Kzo9I GATC 1 cut(s) 453
LmnI GCTCC 2 cut(s) 453, 664
LpnPI CCDG 8 cut(s) 20, 69, 81, 92, 126, 217, 464, 516
Lsp1109I GCAGC 2 cut(s) 64, 143
MaeI CTAG 2 cut(s) 428, 668
MaeIII GTNAC 1 cut(s) 290
MalI GATC 1 cut(s) 455
MboI GATC 1 cut(s) 453
MboII GAAGA 3 cut(s) 288, 448, 627
MflI RGATCY 1 cut(s) 453
MhlI GDGCHC 2 cut(s) 222, 450
MluCI AATT 2 cut(s) 147, 461
Mly113I GGCGCC 1 cut(s) 110
MnlI CCTC 7 cut(s) 24, 184, 211, 495, 579, 598, 637
MseI TTAA 1 cut(s) 396
MspA1I CMGCKG 2 cut(s) 212, 268
Mva1269I GAATGC 2 cut(s) 314, 347
MwoI GCNNNNNNNGC 1 cut(s) 353
NarI GGCGCC 1 cut(s) 110
NdeI CATATG 1 cut(s) 507
NdeII GATC 1 cut(s) 453
NlaIII CATG 5 cut(s) 226, 291, 334, 491, 658
NlaIV GGNNCC 2 cut(s) 39, 111
NmeAIII GCCGAG 1 cut(s) 389
NmuCI GTSAC 1 cut(s) 290
PaeR7I CTCGAG 1 cut(s) 602
PctI GAATGC 2 cut(s) 314, 347
PfeI GAWTC 1 cut(s) 185
PkrI GCNGC 2 cut(s) 54, 133
PluTI GGCGCC 1 cut(s) 113
PpuMI RGGWCCY 1 cut(s) 38
Psp124BI GAGCTC 2 cut(s) 222, 450
Psp5II RGGWCCY 1 cut(s) 38
PspN4I GGNNCC 2 cut(s) 39, 111
PspPI GGNCC 2 cut(s) 38, 361
PspPPI RGGWCCY 1 cut(s) 38
PspXI VCTCGAGB 1 cut(s) 602
PsuI RGATCY 1 cut(s) 453
PvuII CAGCTG 1 cut(s) 212
RsaI GTAC 2 cut(s) 13, 421
RsaNI GTAC 2 cut(s) 12, 420
SacI GAGCTC 2 cut(s) 222, 450
SaqAI TTAA 1 cut(s) 396
SatI GCNGC 2 cut(s) 53, 132
Sau3AI GATC 1 cut(s) 453
Sau96I GGNCC 2 cut(s) 38, 361
SduI GDGCHC 2 cut(s) 222, 450
SfoI GGCGCC 1 cut(s) 111
Sfr274I CTCGAG 1 cut(s) 602
SinI GGWCC 1 cut(s) 38
SlaI CTCGAG 1 cut(s) 602
SmlI CTYRAG 1 cut(s) 602
SmoI CTYRAG 1 cut(s) 602
Sse9I AATT 2 cut(s) 147, 461
SsiI CCGC 1 cut(s) 266
SspDI GGCGCC 1 cut(s) 109
SspMI CTAG 2 cut(s) 428, 668
SstI GAGCTC 2 cut(s) 222, 450
StyI CCWWGG 2 cut(s) 180, 357
TaaI ACNGT 1 cut(s) 128
TaqI TCGA 2 cut(s) 339, 603
TasI AATT 2 cut(s) 147, 461
TatI WGTACW 1 cut(s) 419
TfiI GAWTC 1 cut(s) 185
Tru1I TTAA 1 cut(s) 396
Tru9I TTAA 1 cut(s) 396
TscAI CASTG 2 cut(s) 133, 358
TseFI GTSAC 1 cut(s) 290
TseI GCWGC 2 cut(s) 52, 131
Tsp45I GTSAC 1 cut(s) 290
TspDTI ATGAA 5 cut(s) 276, 291, 332, 524, 665
TspRI CASTG 2 cut(s) 133, 358
VpaK11BI GGWCC 1 cut(s) 38
XapI RAATTY 2 cut(s) 147, 461
XhoI CTCGAG 1 cut(s) 602
XspI CTAG 2 cut(s) 428, 668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.