protein modification by small protein conjugation or removal
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 3 cut(s) | 77, 384, 558 |
| AccIII | TCCGGA | 1 cut(s) | 53 |
| AciI | CCGC | 4 cut(s) | 93, 518, 545, 746 |
| AclWI | GGATC | 2 cut(s) | 289, 885 |
| AcsI | RAATTY | 3 cut(s) | 46, 62, 512 |
| AcuI | CTGAAG | 2 cut(s) | 420, 584 |
| AfaI | GTAC | 1 cut(s) | 506 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 304, 305, 720 |
| AgsI | TTSAA | 9 cut(s) | 143, 235, 380, 448, 457, 691, 791, 824, 844 |
| AjnI | CCWGG | 3 cut(s) | 32, 193, 298 |
| AluBI | AGCT | 3 cut(s) | 648, 700, 763 |
| AluI | AGCT | 3 cut(s) | 648, 700, 763 |
| Alw21I | GWGCWC | 1 cut(s) | 765 |
| Alw26I | GTCTC | 2 cut(s) | 614, 819 |
| AlwI | GGATC | 2 cut(s) | 289, 885 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 623 |
| Ama87I | CYCGRG | 2 cut(s) | 750, 764 |
| Aor13HI | TCCGGA | 1 cut(s) | 53 |
| AoxI | GGCC | 1 cut(s) | 577 |
| ApeKI | GCWGC | 2 cut(s) | 99, 645 |
| ApoI | RAATTY | 3 cut(s) | 46, 62, 512 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 405 |
| AspS9I | GGNCC | 3 cut(s) | 253, 287, 754 |
| AsuHPI | GGTGA | 3 cut(s) | 496, 559, 691 |
| AsuII | TTCGAA | 1 cut(s) | 313 |
| AvaI | CYCGRG | 2 cut(s) | 750, 764 |
| AvaII | GGWCC | 3 cut(s) | 253, 287, 754 |
| BanII | GRGCYC | 2 cut(s) | 491, 765 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 542, 574 |
| BbsI | GAAGAC | 2 cut(s) | 29, 557 |
| Bbv12I | GWGCWC | 1 cut(s) | 765 |
| BbvI | GCAGC | 2 cut(s) | 86, 657 |
| BccI | CCATC | 2 cut(s) | 128, 192 |
| BceAI | ACGGC | 1 cut(s) | 333 |
| BciT130I | CCWGG | 3 cut(s) | 34, 195, 300 |
| BcoDI | GTCTC | 2 cut(s) | 614, 819 |
| BglII | AGATCT | 1 cut(s) | 609 |
| BisI | GCNGC | 3 cut(s) | 100, 646, 747 |
| BlsI | GCNGC | 3 cut(s) | 101, 647, 748 |
| Bme1390I | CCNGG | 3 cut(s) | 34, 195, 300 |
| Bme18I | GGWCC | 3 cut(s) | 253, 287, 754 |
| BmeT110I | CYCGRG | 2 cut(s) | 750, 764 |
| BmgT120I | GGNCC | 3 cut(s) | 253, 287, 754 |
| BmiI | GGNNCC | 2 cut(s) | 176, 755 |
| BmrFI | CCNGG | 3 cut(s) | 34, 195, 300 |
| BmsI | GCATC | 2 cut(s) | 727, 733 |
| BpiI | GAAGAC | 2 cut(s) | 29, 557 |
| BpmI | CTGGAG | 1 cut(s) | 588 |
| Bpu14I | TTCGAA | 1 cut(s) | 313 |
| BpuEI | CTTGAG | 1 cut(s) | 73 |
| BsaJI | CCNNGG | 5 cut(s) | 126, 298, 574, 714, 869 |
| BsaWI | WCCGGW | 1 cut(s) | 53 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 304, 305, 720 |
| Bse1I | ACTGG | 2 cut(s) | 213, 798 |
| Bse3DI | GCAATG | 1 cut(s) | 185 |
| BseAI | TCCGGA | 1 cut(s) | 53 |
| BseBI | CCWGG | 3 cut(s) | 34, 195, 300 |
| BseDI | CCNNGG | 5 cut(s) | 126, 298, 574, 714, 869 |
| BseGI | GGATG | 3 cut(s) | 203, 424, 526 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 304, 305, 720 |
| BseMI | GCAATG | 1 cut(s) | 185 |
| BseMII | CTCAG | 1 cut(s) | 282 |
| BseNI | ACTGG | 2 cut(s) | 213, 798 |
| BseRI | GAGGAG | 1 cut(s) | 563 |
| BseXI | GCAGC | 2 cut(s) | 86, 657 |
| BseYI | CCCAGC | 1 cut(s) | 303 |
| BshFI | GGCC | 1 cut(s) | 579 |
| BsiHKAI | GWGCWC | 1 cut(s) | 765 |
| BsiHKCI | CYCGRG | 2 cut(s) | 750, 764 |
| BsiSI | CCGG | 1 cut(s) | 54 |
| BslFI | GGGAC | 1 cut(s) | 108 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 304, 305, 720 |
| BsmAI | GTCTC | 2 cut(s) | 614, 819 |
| BsmFI | GGGAC | 1 cut(s) | 108 |
| BsmI | GAATGC | 1 cut(s) | 110 |
| BsnI | GGCC | 1 cut(s) | 579 |
| BsoBI | CYCGRG | 2 cut(s) | 750, 764 |
| Bsp119I | TTCGAA | 1 cut(s) | 313 |
| Bsp1286I | GDGCHC | 2 cut(s) | 491, 765 |
| Bsp13I | TCCGGA | 1 cut(s) | 53 |
| Bsp143I | GATC | 4 cut(s) | 294, 609, 655, 890 |
| BspACI | CCGC | 4 cut(s) | 93, 518, 545, 746 |
| BspANI | GGCC | 1 cut(s) | 579 |
| BspCNI | CTCAG | 1 cut(s) | 283 |
| BspEI | TCCGGA | 1 cut(s) | 53 |
| BspHI | TCATGA | 1 cut(s) | 409 |
| BspLI | GGNNCC | 2 cut(s) | 176, 755 |
| BspPI | GGATC | 2 cut(s) | 289, 885 |
| BspT104I | TTCGAA | 1 cut(s) | 313 |
| BsrDI | GCAATG | 1 cut(s) | 185 |
| BsrI | ACTGG | 2 cut(s) | 213, 798 |
| BssECI | CCNNGG | 5 cut(s) | 126, 298, 574, 714, 869 |
| BssMI | GATC | 4 cut(s) | 294, 609, 655, 890 |
| BssNAI | GTATAC | 1 cut(s) | 559 |
| BssT1I | CCWWGG | 3 cut(s) | 126, 714, 869 |
| Bst1107I | GTATAC | 1 cut(s) | 559 |
| Bst2UI | CCWGG | 3 cut(s) | 34, 195, 300 |
| Bst4CI | ACNGT | 3 cut(s) | 82, 556, 592 |
| Bst6I | CTCTTC | 2 cut(s) | 377, 881 |
| BstBI | TTCGAA | 1 cut(s) | 313 |
| BstC8I | GCNNGC | 1 cut(s) | 210 |
| BstDEI | CTNAG | 2 cut(s) | 291, 501 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 718 |
| BstF5I | GGATG | 3 cut(s) | 203, 424, 526 |
| BstKTI | GATC | 4 cut(s) | 297, 612, 658, 893 |
| BstMAI | GTCTC | 2 cut(s) | 614, 819 |
| BstMBI | GATC | 4 cut(s) | 294, 609, 655, 890 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 99, 105, 746 |
| BstNI | CCWGG | 3 cut(s) | 34, 195, 300 |
| BstSCI | CCNGG | 3 cut(s) | 32, 193, 298 |
| BstV1I | GCAGC | 2 cut(s) | 86, 657 |
| BstV2I | GAAGAC | 2 cut(s) | 29, 557 |
| BstX2I | RGATCY | 3 cut(s) | 294, 609, 890 |
| BstYI | RGATCY | 3 cut(s) | 294, 609, 890 |
| BstZ17I | GTATAC | 1 cut(s) | 559 |
| BsuRI | GGCC | 1 cut(s) | 579 |
| BtsCI | GGATG | 3 cut(s) | 203, 424, 526 |
| Cac8I | GCNNGC | 1 cut(s) | 210 |
| CaiI | CAGNNNCTG | 1 cut(s) | 623 |
| CciI | TCATGA | 1 cut(s) | 409 |
| Cfr13I | GGNCC | 3 cut(s) | 253, 287, 754 |
| Csp6I | GTAC | 1 cut(s) | 505 |
| CviAII | CATG | 2 cut(s) | 410, 818 |
| CviQI | GTAC | 1 cut(s) | 505 |
| DdeI | CTNAG | 2 cut(s) | 291, 501 |
| DpnI | GATC | 4 cut(s) | 296, 611, 657, 892 |
| DpnII | GATC | 4 cut(s) | 294, 609, 655, 890 |
| Eam1104I | CTCTTC | 2 cut(s) | 377, 881 |
| EarI | CTCTTC | 2 cut(s) | 377, 881 |
| Ecl136II | GAGCTC | 1 cut(s) | 763 |
| Eco130I | CCWWGG | 3 cut(s) | 126, 714, 869 |
| Eco24I | GRGCYC | 2 cut(s) | 491, 765 |
| Eco32I | GATATC | 1 cut(s) | 526 |
| Eco47I | GGWCC | 3 cut(s) | 253, 287, 754 |
| Eco53kI | GAGCTC | 1 cut(s) | 763 |
| Eco57I | CTGAAG | 2 cut(s) | 420, 584 |
| Eco88I | CYCGRG | 2 cut(s) | 750, 764 |
| EcoICRI | GAGCTC | 1 cut(s) | 763 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 718 |
| EcoRII | CCWGG | 3 cut(s) | 32, 193, 298 |
| EcoRV | GATATC | 1 cut(s) | 526 |
| EcoT14I | CCWWGG | 3 cut(s) | 126, 714, 869 |
| EcoT38I | GRGCYC | 2 cut(s) | 491, 765 |
| ErhI | CCWWGG | 3 cut(s) | 126, 714, 869 |
| FaeI | CATG | 2 cut(s) | 413, 821 |
| FaqI | GGGAC | 1 cut(s) | 108 |
| FatI | CATG | 2 cut(s) | 409, 817 |
| FblI | GTMKAC | 3 cut(s) | 77, 384, 558 |
| Fnu4HI | GCNGC | 3 cut(s) | 100, 646, 747 |
| FokI | GGATG | 3 cut(s) | 210, 431, 533 |
| FriOI | GRGCYC | 2 cut(s) | 491, 765 |
| Fsp4HI | GCNGC | 3 cut(s) | 100, 646, 747 |
| GluI | GCNGC | 3 cut(s) | 100, 646, 747 |
| GsaI | CCCAGC | 1 cut(s) | 307 |
| GsuI | CTGGAG | 1 cut(s) | 588 |
| HaeIII | GGCC | 1 cut(s) | 579 |
| HapII | CCGG | 1 cut(s) | 54 |
| Hin1II | CATG | 2 cut(s) | 413, 821 |
| HindIII | AAGCTT | 1 cut(s) | 698 |
| HinfI | GANTC | 5 cut(s) | 235, 568, 781, 865, 874 |
| HpaII | CCGG | 1 cut(s) | 54 |
| HphI | GGTGA | 3 cut(s) | 496, 559, 691 |
| Hpy166II | GTNNAC | 4 cut(s) | 78, 385, 559, 595 |
| Hpy188I | TCNGA | 3 cut(s) | 268, 619, 895 |
| Hpy188III | TCNNGA | 6 cut(s) | 54, 290, 410, 586, 605, 778 |
| Hpy8I | GTNNAC | 4 cut(s) | 78, 385, 559, 595 |
| HpyAV | CCTTC | 4 cut(s) | 51, 407, 424, 876 |
| HpyCH4III | ACNGT | 3 cut(s) | 82, 556, 592 |
| HpyCH4IV | ACGT | 1 cut(s) | 74 |
| HpyCH4V | TGCA | 3 cut(s) | 19, 190, 220 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 99, 105, 746 |
| HpyF3I | CTNAG | 2 cut(s) | 291, 501 |
| HpySE526I | ACGT | 1 cut(s) | 74 |
| Hsp92II | CATG | 2 cut(s) | 413, 821 |
| Kpn2I | TCCGGA | 1 cut(s) | 53 |
| Kzo9I | GATC | 4 cut(s) | 294, 609, 655, 890 |
| Lsp1109I | GCAGC | 2 cut(s) | 86, 657 |
| LweI | GCATC | 2 cut(s) | 727, 733 |
| MaeII | ACGT | 1 cut(s) | 74 |
| MaeIII | GTNAC | 2 cut(s) | 336, 394 |
| MalI | GATC | 4 cut(s) | 296, 611, 657, 892 |
| MboI | GATC | 4 cut(s) | 294, 609, 655, 890 |
| MboII | GAAGA | 9 cut(s) | 34, 49, 155, 364, 459, 562, 577, 736, 898 |
| MflI | RGATCY | 3 cut(s) | 294, 609, 890 |
| MhlI | GDGCHC | 2 cut(s) | 491, 765 |
| MluCI | AATT | 6 cut(s) | 46, 62, 117, 474, 512, 651 |
| MlyI | GAGTC | 1 cut(s) | 874 |
| MmeI | TCCRAC | 1 cut(s) | 336 |
| MnlI | CCTC | 6 cut(s) | 244, 336, 584, 612, 714, 760 |
| MroI | TCCGGA | 1 cut(s) | 53 |
| MroXI | GAANNNNTTC | 1 cut(s) | 405 |
| MseI | TTAA | 3 cut(s) | 390, 650, 898 |
| MspI | CCGG | 1 cut(s) | 54 |
| MspR9I | CCNGG | 3 cut(s) | 34, 195, 300 |
| Mva1269I | GAATGC | 1 cut(s) | 110 |
| MvaI | CCWGG | 3 cut(s) | 34, 195, 300 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 99, 105, 746 |
| NdeII | GATC | 4 cut(s) | 294, 609, 655, 890 |
| NlaIII | CATG | 2 cut(s) | 413, 821 |
| NlaIV | GGNNCC | 2 cut(s) | 176, 755 |
| NmeAIII | GCCGAG | 1 cut(s) | 555 |
| NspV | TTCGAA | 1 cut(s) | 313 |
| PaeR7I | CTCGAG | 1 cut(s) | 764 |
| PagI | TCATGA | 1 cut(s) | 409 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 488 |
| PctI | GAATGC | 1 cut(s) | 110 |
| PdmI | GAANNNNTTC | 1 cut(s) | 405 |
| PfeI | GAWTC | 4 cut(s) | 235, 568, 781, 874 |
| PkrI | GCNGC | 3 cut(s) | 101, 647, 748 |
| PleI | GAGTC | 1 cut(s) | 873 |
| PpsI | GAGTC | 1 cut(s) | 873 |
| Psp124BI | GAGCTC | 1 cut(s) | 765 |
| Psp6I | CCWGG | 3 cut(s) | 32, 193, 298 |
| PspFI | CCCAGC | 1 cut(s) | 303 |
| PspGI | CCWGG | 3 cut(s) | 32, 193, 298 |
| PspN4I | GGNNCC | 2 cut(s) | 176, 755 |
| PspPI | GGNCC | 3 cut(s) | 253, 287, 754 |
| PspXI | VCTCGAGB | 1 cut(s) | 764 |
| PstNI | CAGNNNCTG | 1 cut(s) | 623 |
| PsuI | RGATCY | 3 cut(s) | 294, 609, 890 |
| RsaI | GTAC | 1 cut(s) | 506 |
| RsaNI | GTAC | 1 cut(s) | 505 |
| SacI | GAGCTC | 1 cut(s) | 765 |
| SaqAI | TTAA | 3 cut(s) | 390, 650, 898 |
| SatI | GCNGC | 3 cut(s) | 100, 646, 747 |
| Sau3AI | GATC | 4 cut(s) | 294, 609, 655, 890 |
| Sau96I | GGNCC | 3 cut(s) | 253, 287, 754 |
| SchI | GAGTC | 1 cut(s) | 874 |
| ScrFI | CCNGG | 3 cut(s) | 34, 195, 300 |
| SduI | GDGCHC | 2 cut(s) | 491, 765 |
| SfaNI | GCATC | 2 cut(s) | 727, 733 |
| Sfr274I | CTCGAG | 1 cut(s) | 764 |
| SfuI | TTCGAA | 1 cut(s) | 313 |
| SinI | GGWCC | 3 cut(s) | 253, 287, 754 |
| SlaI | CTCGAG | 1 cut(s) | 764 |
| SmlI | CTYRAG | 2 cut(s) | 88, 764 |
| SmoI | CTYRAG | 2 cut(s) | 88, 764 |
| Sse9I | AATT | 6 cut(s) | 46, 62, 117, 474, 512, 651 |
| SsiI | CCGC | 4 cut(s) | 93, 518, 545, 746 |
| SstI | GAGCTC | 1 cut(s) | 765 |
| StyD4I | CCNGG | 3 cut(s) | 32, 193, 298 |
| StyI | CCWWGG | 3 cut(s) | 126, 714, 869 |
| TaaI | ACNGT | 3 cut(s) | 82, 556, 592 |
| TaiI | ACGT | 1 cut(s) | 77 |
| TaqI | TCGA | 2 cut(s) | 313, 765 |
| TasI | AATT | 6 cut(s) | 46, 62, 117, 474, 512, 651 |
| TauI | GCSGC | 1 cut(s) | 749 |
| TfiI | GAWTC | 4 cut(s) | 235, 568, 781, 874 |
| Tru1I | TTAA | 3 cut(s) | 390, 650, 898 |
| Tru9I | TTAA | 3 cut(s) | 390, 650, 898 |
| TseI | GCWGC | 2 cut(s) | 99, 645 |
| TspDTI | ATGAA | 5 cut(s) | 214, 364, 398, 426, 435 |
| VpaK11BI | GGWCC | 3 cut(s) | 253, 287, 754 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 718 |
| XapI | RAATTY | 3 cut(s) | 46, 62, 512 |
| XhoI | CTCGAG | 1 cut(s) | 764 |
| XmiI | GTMKAC | 3 cut(s) | 77, 384, 558 |
| XmnI | GAANNNNTTC | 1 cut(s) | 405 |