MD02G1267400.v1.1

MATH domain and coiled-coil domain-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
32171413 .. 32174304
2892 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1267400.v1.1.491

Sequence Viewer

Length: 1209 bp
ATGATGAAGAGCAAGAACAAGGAAGAAGAAGAGGTGTCTGGGACATTCACATGGGTGATCGAAAACTTCTCTAAGCTCAAGAACGAAAATCATTACTCTGACGTTTTCACCATCGCTGGTTTCAAATGGAGGATCCTAGCACGGCCGAAGGGCAACGAAGTAAATTCCGAAATGCACTTCTCCATGTACTTGTGTGTCCCAAGTGCTTCAACTCTGGAACCTGGTTGGACTAAATTTGCCCACTTCAGCTTGAGTGTGCTCAATCAACTGGACAGCAACAAGACAATCACAATGGCTACAAAGGGCTCTTATAAAGAGTTCAAAGAACACAGTAGTGAATGGGGCTTCAAATCATTCATGCTGCTCAGTGAACTTTATGACAAGACTGCAGGTTATCTCGTGAATGATAAATGCATTGTTGAAGTGAAGGTCCGTATTCCAATAGACCAAAGAGCAAATGGTTTTGCAGAATCTGCACTTATGGAGCCCATAAAGAAAGAGCGTGGTGGGCAGGAACCTTCACATGTGCATTCGGTGCATACTCCAGAATCTTCTCCTACACCTAAGACACCAAGTTCAGAACTGCCGACTCCTTTCCAAGAAACATCAGGTCCTGAACAAGTTTGCACCAAGGCTATTGTTGAAAGCCTTCCTGACCCTTCTCTAGTTAAGGAGCTTGAGGAAATTCCCACCAAACCAACAGGGGAGCTTTTGGAATTTCGTGGGTTGGGACTAATAGAGAAAGCTTTCGTTCCACTGCTGGAGGAAGCTTGTTCATTGCATCCTTCATTGATTGAGTGCGTACGTAAGAAGAATCGTAAAGTTGTAGAATGTGCTTTGACAGCGCTCGGAGGGCTCTTGCATTTTCTTAAAACAACAAAGGTCAAGGATATGAATGGGGATGCCTTTACTCATCTTCGAAGTTTATGGGAGGATGTCGAGATGTTCAGATTTGACTTGGCTTGGCTGGAGCCACATGTTCAATCGGCTTTGGGTATGAAGAAATTTCTGGAAAGGGCAAGGAGAGTGAAGAGGTTGAGAGAAGACGTTGAAGCTTTGGATAATGAGAAGAAGAGGCGGAGTGCTGCCCTTGCTGTCACAGAGGCAGAGCTTGAGGAAGCAAAGAGAGAGTTGGCTAAGGAGGAAGAGGGCTTCAACGAGAAAGATATGGATTCTGAGCTAGGTTGTGGTGAGTTAGTCCTATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

403

Amino Acids

45.5

Weight (kDa)

5.72

Isoelectric Point (pI)

48.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MATH_2 PF22486 15 - 144 2.2e-33 MATH domain
MATH PF00917 20 - 146 1.3e-17 MATH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000025)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31370 AT1G31380 AT1G31390 AT1G31400 AT2G01790 AT2G05400 AT2G05400 AT2G05400 AT2G05410 AT2G05410 AT2G05420 AT2G05430 AT2G42455 AT2G42460 AT2G42465 AT2G42470 AT2G42475 AT2G42480 AT3G27040 AT3G29580 AT3G44790 AT3G44800 AT3G44805 AT3G58200 AT3G58210 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58230 AT3G58240 AT3G58250 AT3G58260 AT3G58270 AT3G58270 AT3G58270 AT3G58280 AT3G58290 AT3G58290 AT3G58290 AT3G58300 AT3G58320 AT3G58330 AT3G58340 AT3G58340 AT3G58350 AT3G58350 AT3G58360 AT3G58370 AT3G58380 AT3G58400 AT3G58410 AT3G58410 AT3G58430 AT3G58430 AT3G58440 AT5G03550
fragaria_vesca FvH4_2g00084 FvH4_2g15701 FvH4_2g24334 FvH4_3g23322 FvH4_3g23322 FvH4_3g23322 FvH4_3g23482 FvH4_3g23482 FvH4_3g23482 FvH4_3g23491 FvH4_3g23492 FvH4_3g23510 FvH4_3g23520 FvH4_3g23520 FvH4_3g23520 FvH4_3g23580 FvH4_3g38842 FvH4_4g10396 FvH4_5g29370 FvH4_5g32130 FvH4_7g04570 FvH4_7g04571 FvH4_7g04741 FvH4_7g04741 FvH4_7g04750 FvH4_7g04750 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04770 FvH4_7g04770 FvH4_7g04770
malus_domestica MD00G1065000.v1.1 MD00G1065300.v1.1 MD02G1267400.v1.1 MD02G1267600.v1.1 MD02G1267700.v1.1 MD02G1267800.v1.1 MD02G1268100.v1.1 MD02G1268300.v1.1 MD02G1268400.v1.1 MD02G1268500.v1.1 MD03G1193600.v1.1 MD05G1071400.v1.1 MD07G1051000.v1.1 MD07G1051100.v1.1 MD07G1051200.v1.1 MD07G1051300.v1.1 MD07G1051500.v1.1 MD07G1051700.v1.1 MD07G1051800.v1.1 MD07G1085400.v1.1 MD07G1085500.v1.1 MD11G1177200.v1.1 MD11G1209800.v1.1 MD11G1209900.v1.1 MD11G1210000.v1.1 MD12G1048100.v1.1 MD12G1048600.v1.1 MD14G1046700.v1.1 MD14G1047400.v1.1
prunus_persica Prupe.2G051200_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052700_v2.0.a1 Prupe.2G052800_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G053100_v2.0.a1 Prupe.2G053300_v2.0.a1 Prupe.2G054800_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.4G223300_v2.0.a1 Prupe.4G223300_v2.0.a1
pyrus_communis pycom01g04720 pycom02g22950 pycom02g22960 pycom02g22970 pycom02g22990 pycom02g23000 pycom02g23010 pycom03g14600 pycom03g14610 pycom05g06150 pycom07g03820 pycom07g03830 pycom07g03850 pycom07g03860 pycom07g03880 pycom07g03890 pycom07g03900 pycom07g04000 pycom07g04010 pycom11g18540 pycom11g18560 pycom12g04190 pycom17g19100
rosa_chinensis RchiOBHm_Chr0c19g0500051 RchiOBHm_Chr1g0330011 RchiOBHm_Chr1g0330031 RchiOBHm_Chr1g0330041 RchiOBHm_Chr1g0330121 RchiOBHm_Chr1g0330141 RchiOBHm_Chr1g0330151 RchiOBHm_Chr1g0330181 RchiOBHm_Chr1g0330191 RchiOBHm_Chr1g0330201 RchiOBHm_Chr1g0330211 RchiOBHm_Chr1g0330221 RchiOBHm_Chr1g0367471 RchiOBHm_Chr2g0113311 RchiOBHm_Chr2g0148281 RchiOBHm_Chr4g0400061 RchiOBHm_Chr4g0437571 RchiOBHm_Chr5g0041361 RchiOBHm_Chr5g0041421 RchiOBHm_Chr5g0041481 RchiOBHm_Chr5g0041491 RchiOBHm_Chr5g0041501 RchiOBHm_Chr5g0041511 RchiOBHm_Chr5g0042491 RchiOBHm_Chr5g0042501 RchiOBHm_Chr6g0263551 RchiOBHm_Chr6g0286221 RchiOBHm_Chr7g0228171 RchiOBHm_Chr7g0231391 RchiOBHm_Chr7g0231401
rosa_laevigata RLG00000000870 RLG00000001420 RLG00000001582 RLG00000001602 RLG00000001700 RLG00000002476 RLG00000005787 RLG00000007689 RLG00000008446 RLG00000008811 RLG00000008812 RLG00000009013 RLG00000009942 RLG00000012752 RLG00000013511 RLG00000014053 RLG00000015257 RLG00000015258 RLG00000016149 RLG00000016691 RLG00000018661 RLG00000018662 RLG00000020991 RLG00000020992 RLG00000020993 RLG00000027309 RLG00000028568 RLG00000029119 RLG00000029371 RLG00000029563 RLG00000029818 RLG00000029819 RLG00000029821 RLG00000029822 RLG00000029824 RLG00000029827 RLG00000029828 RLG00000029829 RLG00000029841 RLG00000029843 RLG00000032676 RLG00000033366 RLG00000033367 RLG00000034023 RLG00000034066 RLG00000034072 RLG00000034073 RLG00000034074 RLG00000034130 RLG00000034133 RLG00000035487 RLG00000035488 RLG00000035793
rosa_multiflora Rmu_co8241405.1_g000001 Rmu_co8251033.1_g000001 Rmu_co8297611.1_g000001 Rmu_co8346639.1_g000001 Rmu_co8405917.1_g000001 Rmu_sc0000045.1_g000044 Rmu_sc0000061.1_g000032 Rmu_sc0000068.1_g000021 Rmu_sc0000068.1_g000022 Rmu_sc0000415.1_g000001 Rmu_sc0000499.1_g000003 Rmu_sc0000594.1_g000020 Rmu_sc0000673.1_g000007 Rmu_sc0000908.1_g000004 Rmu_sc0001123.1_g000013 Rmu_sc0001123.1_g000014 Rmu_sc0001167.1_g000026 Rmu_sc0001598.1_g000011 Rmu_sc0001696.1_g000003 Rmu_sc0001696.1_g000011 Rmu_sc0001696.1_g000019 Rmu_sc0001696.1_g000020 Rmu_sc0003007.1_g000016 Rmu_sc0003007.1_g000029 Rmu_sc0003051.1_g000010 Rmu_sc0003396.1_g000029 Rmu_sc0004798.1_g000020 Rmu_sc0005375.1_g000016 Rmu_sc0005375.1_g000017 Rmu_sc0005659.1_g000033 Rmu_sc0005659.1_g000034 Rmu_sc0006311.1_g000011 Rmu_sc0008249.1_g000002 Rmu_sc0008249.1_g000018 Rmu_sc0008600.1_g000014 Rmu_sc0009365.1_g000010 Rmu_sc0009365.1_g000022 Rmu_sc0009365.1_g000025 Rmu_sc0011112.1_g000008 Rmu_sc0011112.1_g000009 Rmu_sc0012031.1_g000020 Rmu_sc0013350.1_g000014 Rmu_sc0020359.1_g000004 Rmu_sc0021997.1_g000003 Rmu_sc0021997.1_g000004 Rmu_sc0023610.1_g000002 Rmu_sc0023611.1_g000001 Rmu_sc0028894.1_g000001 Rmu_sc0031050.1_g000001 Rmu_sc0041109.1_g000001 Rmu_ssc0000087.1_g000050 Rmu_ssc0000087.1_g000051 Rmu_ssc0000087.1_g000052 Rmu_ssc0000295.1_g000058 Rmu_ssc0000343.1_g000031 Rmu_ssc0000423.1_g000015 Rmu_ssc0000470.1_g000005 Rmu_ssc0000470.1_g000006
rosa_roxburghii Rroxscaffold_1G00005900 Rroxscaffold_1G00005910 Rroxscaffold_1G00012600 Rroxscaffold_1G00016860 Rroxscaffold_1G00032110 Rroxscaffold_1G00038140 Rroxscaffold_1G00038200 Rroxscaffold_1G00039020 Rroxscaffold_1G00039030 Rroxscaffold_1G00039080 Rroxscaffold_1G00039090 Rroxscaffold_1G00039270 Rroxscaffold_2G00097120 Rroxscaffold_2G00097130 Rroxscaffold_2G00137700 Rroxscaffold_2G00151740 Rroxscaffold_2G00151750 Rroxscaffold_3G00224160 Rroxscaffold_3G00224170 Rroxscaffold_3G00226080 Rroxscaffold_3G00226090 Rroxscaffold_3G00229350 Rroxscaffold_3G00231340 Rroxscaffold_4G00291390 Rroxscaffold_4G00316220 Rroxscaffold_4G00316230 Rroxscaffold_4G00320040 Rroxscaffold_4G00320050 Rroxscaffold_4G00320120 Rroxscaffold_4G00320140 Rroxscaffold_4G00320180 Rroxscaffold_4G00320270 Rroxscaffold_4G00320280 Rroxscaffold_4G00320290 Rroxscaffold_4G00320430 Rroxscaffold_4G00321910 Rroxscaffold_5G00348730 Rroxscaffold_5G00355020 Rroxscaffold_5G00355080 Rroxscaffold_5G00357490 Rroxscaffold_5G00376500 Rroxscaffold_5G00376510 Rroxscaffold_7G00179590 Rroxscaffold_7G00179600 Rroxscaffold_7G00198610
rosa_rugosa Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0086300 Rorug01G0086500 Rorug01G0087000 Rorug01G0087100 Rorug01G0087600 Rorug01G0087700 Rorug01G0087800 Rorug01G0087800 Rorug01G0302500 Rorug02G0249300 Rorug02G0249300 Rorug02G0249400 Rorug03G0189000 Rorug04G0181800 Rorug04G0283800.1 Rorug04G0283900.1 Rorug05G0043500 Rorug05G0191800 Rorug05G0191900 Rorug05G0192800 Rorug05G0192900 Rorug05G0193000 Rorug05G0201000 Rorug05G0201100 Rorug06G0173900 Rorug06G0173900 Rorug07G0009800 Rorug07G0246300.1 Rorug07G0246400
rosa_samantha Rh1AG103600 Rh1AG104800 Rh1AG105200 Rh1AG105300 Rh1AG105500 Rh1BG082000 Rh1BG082200 Rh1BG082300 Rh1BG082900 Rh1BG083000 Rh1BG083300 Rh1BG083500 Rh1BG083600 Rh1BG083800 Rh1BG083900 Rh1BG084000 Rh1BG084100 Rh1BG084200 Rh1BG092200 Rh1BG275300 Rh1CG098700 Rh1CG098800 Rh1CG100300 Rh1CG100400 Rh1CG100600 Rh1CG100900 Rh1CG101000 Rh1CG101700 Rh1DG066900 Rh1DG067000 Rh1DG106000 Rh1DG107600 Rh1DG107800 Rh1DG108100 Rh1DG108200 Rh1DG108600 Rh1DG108700 Rh1DG108900 Rh1DG109000 Rh1DG109100 Rh1DG109300 Rh1DG109400 Rh1DG109500 Rh1DG109700 Rh1DG109800 Rh1DG173900 Rh2AG270300 Rh2AG398900 Rh2CG245000 Rh2CG260700 Rh2CG278600 Rh2CG342400 Rh2CG385700 Rh3DG197200 Rh3DG197300 Rh4AG015100 Rh4BG347400 Rh4DG360400 Rh5AG278600 Rh5AG278700 Rh5AG286900 Rh5AG287000 Rh5BG282900 Rh5BG283000 Rh5BG283100 Rh5BG291400 Rh5CG314900 Rh5CG315100 Rh5CG315400 Rh5CG315700 Rh5CG315900 Rh5CG316000 Rh5CG323600 Rh5CG323700 Rh5DG291400 Rh5DG292300 Rh5DG292500 Rh5DG292700 Rh5DG292800 Rh5DG292900 Rh5DG301100 Rh5DG301200 Rh5DG301400 Rh5DG350900 Rh6BG407700 Rh6CG294900 Rh6DG286900 Rh7AG400400 Rh7AG420600 Rh7BG381700 Rh7BG395000 Rh7CG418600 Rh7CG440700 Rh7DG396500 Rh7DG413200
rosa_wichuraiana Rw1G003300 Rw1G008240 Rw1G008250 Rw1G008270 Rw1G008330 Rw1G008340 Rw1G008350 Rw1G008360 Rw1G008370 Rw1G008810 Rw1G021140 Rw3G020650 Rw5G026150 Rw5G026200 Rw5G026240 Rw5G026250 Rw5G026650 Rw5G030820 Rw7G006630 Rw7G030060 Rw7G034700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 312
Acc36I ACCTGC 1 cut(s) 380
AciI CCGC 1 cut(s) 1078
AclWI GGATC 2 cut(s) 127, 140
AcoI YGGCCR 1 cut(s) 143
AcsI RAATTY 5 cut(s) 163, 233, 684, 716, 1004
AcuI CTGAAG 1 cut(s) 229
AfaI GTAC 2 cut(s) 188, 804
AfeI AGCGCT 1 cut(s) 846
AflIII ACRYGT 2 cut(s) 523, 976
AgsI TTSAA 9 cut(s) 124, 210, 322, 349, 422, 644, 983, 1052, 1156
AjnI CCWGG 1 cut(s) 220
AleI CACNNNNGTG 2 cut(s) 53, 333
AluBI AGCT 9 cut(s) 76, 249, 676, 709, 746, 770, 1055, 1111, 1180
AluI AGCT 9 cut(s) 76, 249, 676, 709, 746, 770, 1055, 1111, 1180
Alw21I GWGCWC 1 cut(s) 261
AlwI GGATC 2 cut(s) 127, 140
AlwNI CAGNNNCTG 2 cut(s) 473, 614
Aor51HI AGCGCT 1 cut(s) 846
AoxI GGCC 1 cut(s) 143
ApeKI GCWGC 2 cut(s) 361, 1085
ApoI RAATTY 5 cut(s) 163, 233, 684, 716, 1004
Asp700I GAANNNNTTC 2 cut(s) 648, 746
AspLEI GCGC 1 cut(s) 847
AspS9I GGNCC 2 cut(s) 430, 611
AsuHPI GGTGA 3 cut(s) 67, 100, 1202
AsuII TTCGAA 1 cut(s) 919
AvaII GGWCC 2 cut(s) 430, 611
BamHI GGATCC 1 cut(s) 132
BanII GRGCYC 3 cut(s) 308, 489, 858
BauI CACGAG 1 cut(s) 398
BbsI GAAGAC 1 cut(s) 1050
Bbv12I GWGCWC 1 cut(s) 261
BbvI GCAGC 2 cut(s) 348, 1072
BccI CCATC 1 cut(s) 119
BceAI ACGGC 1 cut(s) 158
BciT130I CCWGG 1 cut(s) 222
BfaI CTAG 3 cut(s) 137, 665, 1181
BfmI CTRYAG 1 cut(s) 387
BfoI RGCGCY 1 cut(s) 848
BfuAI ACCTGC 1 cut(s) 380
BisI GCNGC 2 cut(s) 362, 1086
BlsI GCNGC 2 cut(s) 363, 1087
Bme1390I CCNGG 1 cut(s) 222
Bme18I GGWCC 2 cut(s) 430, 611
BmgT120I GGNCC 2 cut(s) 430, 611
BmiI GGNNCC 5 cut(s) 134, 219, 486, 516, 972
BmrFI CCNGG 1 cut(s) 222
BmsI GCATC 2 cut(s) 790, 892
BpiI GAAGAC 1 cut(s) 1050
BpmI CTGGAG 3 cut(s) 528, 782, 989
Bpu10I CCTNAGC 1 cut(s) 1137
Bpu14I TTCGAA 1 cut(s) 919
BpuEI CTTGAG 4 cut(s) 62, 271, 698, 1133
BsaAI YACGTR 1 cut(s) 806
BsaJI CCNNGG 1 cut(s) 630
Bse1I ACTGG 1 cut(s) 273
Bse3DI GCAATG 1 cut(s) 776
BseBI CCWGG 1 cut(s) 222
BseDI CCNNGG 1 cut(s) 630
BseGI GGATG 3 cut(s) 781, 907, 940
BseMI GCAATG 1 cut(s) 776
BseMII CTCAG 2 cut(s) 379, 1167
BseNI ACTGG 1 cut(s) 273
BseX3I CGGCCG 1 cut(s) 143
BseXI GCAGC 2 cut(s) 348, 1072
BsgI GTGCAG 1 cut(s) 459
Bsh1285I CGRYCG 1 cut(s) 146
BshFI GGCC 1 cut(s) 145
BsiEI CGRYCG 1 cut(s) 146
BsiHKAI GWGCWC 1 cut(s) 261
BsiWI CGTACG 1 cut(s) 802
BslFI GGGAC 3 cut(s) 55, 182, 744
BsmFI GGGAC 3 cut(s) 55, 182, 744
BsmI GAATGC 1 cut(s) 529
BsnI GGCC 1 cut(s) 145
Bsp119I TTCGAA 1 cut(s) 919
Bsp1286I GDGCHC 4 cut(s) 261, 308, 489, 858
Bsp143I GATC 2 cut(s) 57, 132
BspACI CCGC 1 cut(s) 1078
BspANI GGCC 1 cut(s) 145
BspCNI CTCAG 2 cut(s) 378, 1168
BspLI GGNNCC 5 cut(s) 134, 219, 486, 516, 972
BspMAI CTGCAG 1 cut(s) 391
BspMI ACCTGC 1 cut(s) 380
BspPI GGATC 2 cut(s) 127, 140
BspQI GCTCTTC 1 cut(s) 2
BspT104I TTCGAA 1 cut(s) 919
BsrDI GCAATG 1 cut(s) 776
BsrI ACTGG 1 cut(s) 273
BssECI CCNNGG 1 cut(s) 630
BssMI GATC 2 cut(s) 57, 132
BssSI CACGAG 1 cut(s) 398
BssT1I CCWWGG 1 cut(s) 630
Bst2BI CACGAG 1 cut(s) 398
Bst2UI CCWGG 1 cut(s) 222
Bst4CI ACNGT 1 cut(s) 332
Bst6I CTCTTC 5 cut(s) 2, 24, 1025, 1067, 1140
BstAPI GCANNNNNTGC 2 cut(s) 473, 535
BstBAI YACGTR 1 cut(s) 806
BstBI TTCGAA 1 cut(s) 919
BstDEI CTNAG 5 cut(s) 72, 365, 564, 1137, 1176
BstF5I GGATG 3 cut(s) 781, 907, 940
BstH2I RGCGCY 1 cut(s) 848
BstHHI GCGC 1 cut(s) 847
BstKTI GATC 2 cut(s) 60, 135
BstMBI GATC 2 cut(s) 57, 132
BstMCI CGRYCG 1 cut(s) 146
BstMWI GCNNNNNNNGC 6 cut(s) 473, 508, 535, 842, 853, 1091
BstNI CCWGG 1 cut(s) 222
BstNSI RCATGY 2 cut(s) 527, 980
BstSCI CCNGG 1 cut(s) 220
BstSFI CTRYAG 1 cut(s) 387
BstSNI TACGTA 1 cut(s) 806
BstV1I GCAGC 2 cut(s) 348, 1072
BstV2I GAAGAC 1 cut(s) 1050
BstX2I RGATCY 1 cut(s) 132
BstYI RGATCY 1 cut(s) 132
BstZI CGGCCG 1 cut(s) 143
BsuRI GGCC 1 cut(s) 145
BtgZI GCGATG 1 cut(s) 97
BtsCI GGATG 3 cut(s) 781, 907, 940
BtsI GCAGTG 1 cut(s) 755
BtsIMutI CAGTG 2 cut(s) 373, 755
BveI ACCTGC 1 cut(s) 380
CaiI CAGNNNCTG 2 cut(s) 473, 614
CfoI GCGC 1 cut(s) 847
Cfr13I GGNCC 2 cut(s) 430, 611
CsiI ACCWGGT 1 cut(s) 220
Csp6I GTAC 2 cut(s) 187, 803
CviAII CATG 5 cut(s) 51, 184, 358, 524, 977
CviQI GTAC 2 cut(s) 187, 803
DdeI CTNAG 5 cut(s) 72, 365, 564, 1137, 1176
DpnI GATC 2 cut(s) 59, 134
DpnII GATC 2 cut(s) 57, 132
EaeI YGGCCR 1 cut(s) 143
EagI CGGCCG 1 cut(s) 143
Eam1104I CTCTTC 5 cut(s) 2, 24, 1025, 1067, 1140
EarI CTCTTC 5 cut(s) 2, 24, 1025, 1067, 1140
EciI GGCGGA 1 cut(s) 1093
EclXI CGGCCG 1 cut(s) 143
Eco105I TACGTA 1 cut(s) 806
Eco130I CCWWGG 1 cut(s) 630
Eco24I GRGCYC 3 cut(s) 308, 489, 858
Eco47I GGWCC 2 cut(s) 430, 611
Eco47III AGCGCT 1 cut(s) 846
Eco52I CGGCCG 1 cut(s) 143
Eco57I CTGAAG 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 611
EcoRII CCWGG 1 cut(s) 220
EcoT14I CCWWGG 1 cut(s) 630
EcoT22I ATGCAT 1 cut(s) 416
EcoT38I GRGCYC 3 cut(s) 308, 489, 858
ErhI CCWWGG 1 cut(s) 630
FaeI CATG 5 cut(s) 54, 187, 361, 527, 980
FaqI GGGAC 3 cut(s) 55, 182, 744
FatI CATG 5 cut(s) 50, 183, 357, 523, 976
Fnu4HI GCNGC 2 cut(s) 362, 1086
FokI GGATG 3 cut(s) 768, 914, 947
FriOI GRGCYC 3 cut(s) 308, 489, 858
Fsp4HI GCNGC 2 cut(s) 362, 1086
FspBI CTAG 3 cut(s) 137, 665, 1181
GlaI GCGC 1 cut(s) 846
GluI GCNGC 2 cut(s) 362, 1086
GsuI CTGGAG 3 cut(s) 528, 782, 989
HaeII RGCGCY 1 cut(s) 848
HaeIII GGCC 1 cut(s) 145
HhaI GCGC 1 cut(s) 847
Hin1II CATG 5 cut(s) 54, 187, 361, 527, 980
Hin6I GCGC 1 cut(s) 845
HinP1I GCGC 1 cut(s) 845
HindIII AAGCTT 3 cut(s) 744, 768, 1053
HinfI GANTC 5 cut(s) 470, 548, 589, 814, 1172
HphI GGTGA 3 cut(s) 67, 100, 1202
Hpy166II GTNNAC 1 cut(s) 371
Hpy188I TCNGA 6 cut(s) 100, 169, 580, 851, 950, 1177
Hpy188III TCNNGA 8 cut(s) 79, 215, 400, 545, 614, 653, 940, 1010
Hpy8I GTNNAC 1 cut(s) 371
HpyAV CCTTC 6 cut(s) 142, 421, 528, 659, 669, 795
HpyCH4III ACNGT 1 cut(s) 332
HpyCH4IV ACGT 3 cut(s) 102, 805, 1047
HpyF10VI GCNNNNNNNGC 6 cut(s) 473, 508, 535, 842, 853, 1091
HpyF3I CTNAG 5 cut(s) 72, 365, 564, 1137, 1176
HpySE526I ACGT 3 cut(s) 102, 805, 1047
Hsp92II CATG 5 cut(s) 54, 187, 361, 527, 980
HspAI GCGC 1 cut(s) 845
Kzo9I GATC 2 cut(s) 57, 132
LguI GCTCTTC 1 cut(s) 2
LmnI GCTCC 4 cut(s) 484, 673, 706, 970
Lsp1109I GCAGC 2 cut(s) 348, 1072
LweI GCATC 2 cut(s) 790, 892
MabI ACCWGGT 1 cut(s) 220
MaeI CTAG 3 cut(s) 137, 665, 1181
MaeII ACGT 3 cut(s) 102, 805, 1047
MaeIII GTNAC 1 cut(s) 1096
MalI GATC 2 cut(s) 59, 134
MboI GATC 2 cut(s) 57, 132
MflI RGATCY 1 cut(s) 132
MhlI GDGCHC 4 cut(s) 261, 308, 489, 858
MluCI AATT 5 cut(s) 163, 233, 684, 716, 1004
MlyI GAGTC 1 cut(s) 583
MmeI TCCRAC 1 cut(s) 206
Mph1103I ATGCAT 1 cut(s) 416
MroXI GAANNNNTTC 2 cut(s) 648, 746
MseI TTAA 2 cut(s) 669, 870
MslI CAYNNNNRTG 3 cut(s) 49, 53, 333
MspR9I CCNGG 1 cut(s) 222
Mva1269I GAATGC 1 cut(s) 529
MvaI CCWGG 1 cut(s) 222
MwoI GCNNNNNNNGC 6 cut(s) 473, 508, 535, 842, 853, 1091
NdeII GATC 2 cut(s) 57, 132
NlaIII CATG 5 cut(s) 54, 187, 361, 527, 980
NlaIV GGNNCC 5 cut(s) 134, 219, 486, 516, 972
NmuCI GTSAC 1 cut(s) 1096
NsiI ATGCAT 1 cut(s) 416
NspI RCATGY 2 cut(s) 527, 980
NspV TTCGAA 1 cut(s) 919
OliI CACNNNNGTG 2 cut(s) 53, 333
PciI ACATGT 2 cut(s) 523, 976
PciSI GCTCTTC 1 cut(s) 2
PctI GAATGC 1 cut(s) 529
PdmI GAANNNNTTC 2 cut(s) 648, 746
PfeI GAWTC 4 cut(s) 470, 548, 814, 1172
Pfl23II CGTACG 1 cut(s) 802
PkrI GCNGC 2 cut(s) 363, 1087
PleI GAGTC 1 cut(s) 583
PpsI GAGTC 1 cut(s) 583
Ppu21I YACGTR 1 cut(s) 806
PpuMI RGGWCCY 1 cut(s) 611
PscI ACATGT 2 cut(s) 523, 976
PsiI TTATAA 1 cut(s) 312
Psp5II RGGWCCY 1 cut(s) 611
Psp6I CCWGG 1 cut(s) 220
PspGI CCWGG 1 cut(s) 220
PspLI CGTACG 1 cut(s) 802
PspN4I GGNNCC 5 cut(s) 134, 219, 486, 516, 972
PspPI GGNCC 2 cut(s) 430, 611
PspPPI RGGWCCY 1 cut(s) 611
PstI CTGCAG 1 cut(s) 391
PstNI CAGNNNCTG 2 cut(s) 473, 614
PsuI RGATCY 1 cut(s) 132
RsaI GTAC 2 cut(s) 188, 804
RsaNI GTAC 2 cut(s) 187, 803
RseI CAYNNNNRTG 3 cut(s) 49, 53, 333
SapI GCTCTTC 1 cut(s) 2
SaqAI TTAA 2 cut(s) 669, 870
SatI GCNGC 2 cut(s) 362, 1086
Sau3AI GATC 2 cut(s) 57, 132
Sau96I GGNCC 2 cut(s) 430, 611
SchI GAGTC 1 cut(s) 583
ScrFI CCNGG 1 cut(s) 222
SduI GDGCHC 4 cut(s) 261, 308, 489, 858
SexAI ACCWGGT 1 cut(s) 220
SfaNI GCATC 2 cut(s) 790, 892
SfcI CTRYAG 1 cut(s) 387
SfuI TTCGAA 1 cut(s) 919
SinI GGWCC 2 cut(s) 430, 611
SmiMI CAYNNNNRTG 3 cut(s) 49, 53, 333
SmlI CTYRAG 4 cut(s) 77, 250, 677, 1112
SmoI CTYRAG 4 cut(s) 77, 250, 677, 1112
SnaBI TACGTA 1 cut(s) 806
Sse9I AATT 5 cut(s) 163, 233, 684, 716, 1004
SsiI CCGC 1 cut(s) 1078
SspMI CTAG 3 cut(s) 137, 665, 1181
StyD4I CCNGG 1 cut(s) 220
StyI CCWWGG 1 cut(s) 630
TaaI ACNGT 1 cut(s) 332
TaiI ACGT 3 cut(s) 105, 808, 1050
TaqI TCGA 3 cut(s) 60, 919, 939
TasI AATT 5 cut(s) 163, 233, 684, 716, 1004
TatI WGTACW 1 cut(s) 186
TfiI GAWTC 4 cut(s) 470, 548, 814, 1172
Tru1I TTAA 2 cut(s) 669, 870
Tru9I TTAA 2 cut(s) 669, 870
TscAI CASTG 2 cut(s) 373, 762
TseFI GTSAC 1 cut(s) 1096
TseI GCWGC 2 cut(s) 361, 1085
Tsp45I GTSAC 1 cut(s) 1096
TspDTI ATGAA 6 cut(s) 20, 346, 765, 777, 908, 1013
TspGWI ACGGA 1 cut(s) 422
TspRI CASTG 2 cut(s) 373, 762
VpaK11BI GGWCC 2 cut(s) 430, 611
XapI RAATTY 5 cut(s) 163, 233, 684, 716, 1004
XceI RCATGY 2 cut(s) 527, 980
XcmI CCANNNNNNNNNTGG 1 cut(s) 455
XmnI GAANNNNTTC 2 cut(s) 648, 746
XspI CTAG 3 cut(s) 137, 665, 1181
Zsp2I ATGCAT 1 cut(s) 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.