Rorug01G0087700

MATH domain and coiled-coil domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
14204089 .. 14206296
2208 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0087700.1

Sequence Viewer

Length: 2208 bp
ATGTCTCCTTTTCAGCAGACATCACAATCTGCGATTAACAATCATCCACAGACAGGCTTTAGGCAAATAAACTCATCACAACATGCTCCTTATATTCATCAGAATGCATCATCAATTCCACAGAGTCTGCTAATGCAATCGCAGAAGCATGTTGTGATGAGGAGAAGATTAGCTGCCACCACTCTACAACAGAATCAGTCAACTTGCCTCGACTTTCCGCAGCAACAACACATTAACACATACCAGCTGAATGATGCACAACAGCAGTTACATAGACAGAACCTTAATCTTTCGGGTCCGCATCATGAGCAATTGAGCCAAAGAAACATTATCTCTATACAGCAACAAACTCTTGAGAGACAGTTGAATTCTTCACAGGTAGAGAAGATGCAAAGGCAGCAAAACCGAGTAGAACAAGATGAGCAGCAAACACATCAAATGGCAGGAATGCCAGCTTCCACATTATTAATGGAAGGGGAGGTCTACCGAAAGGTCCAAATGCTAAAACGCAAGTATGAAAGACCACTGAAAGTTATCTTCCAAAGGTTCACATATTGTCTCCAGAACCTAGATAGACACAGTATCAACAAACTTGAAGTAGTAAACAGCTTGTATCAGACTGTCAAGTCTATCCTTAGGATGCTGAATGTGCCAGAAAGAGACACTATGCCTACTACCAAGGAGAAGTTGGGTCTACTTGAGAAGAAAATCGAAGACATTCTCCACCCATGTGGAAACCAACAGCGTCAATTGGTGCAAATTATTGATTCTCGGACTCTTCAAGCTCAGACAAACCAAGAGGAAAAGAAGCCACCAACGCAGACAGTGAATATAGAATGTTTTGCAACAAAGATGCAGCAGAGCAATGTGACAAACTTGATGATGAACGATTCTCAGCCTCTGATCGAGAAACATGGCAGAAAACATTTGCCAAGAAACTTGACTAGGAAAGATTCAGATCAAGCAAGTTCGTCCGGGTACTTGACAATGCCTACAAGTAGTCCCCAACAACAAAATGTTATGACCTTGTTGTCACAAAACCCCATTCAGTCAAATGTCAATAATTTGGAGTCAAGATTTAGTGTACCTCGATATGTGCACCTGACGCAATCTAAAGAACAGCAGGATGTGCAAACTCAAAAACCAAAACAGCAATTACTGCAGGAGAATCACCGGCTGGTGAAGTTGCAGTCTGAAGCTTTTCCTAATCCTTTGCGGGAAGATCATAATTCTTCCAGTCAACAAGTTCCTAAACATACTTGTCAGAGTGAAAAGATCAACCTTCCAATGCATCTTACAAAAGTTAGCAGTCCTTTCAATTCACCCTCTAGAATTTCTTCTTTGGCTCCCAAGGCTTCGTCACCTATGTCAGTGGACTCTGAGAAACCTAAGTCAGATACTCTGTCCAACTCAAATGCTGGAAATATTGGAGATGAACAAGTAAAAGGTGCAACAGAAGCCCCATCATTAAGTACTCCTTTACTTGAAAAGTCCAACGATGACATATGTAGTAATAAGTCCACAGTAGATTCTGATGCGGTGCAGCCTATTCATCAATTAATTAATGTGGTGAACTCCATGTCATCTAAAGCACCAAGTGCTTCTGCTTCAGTCATTGCTTCAGTAGCGTGTACGACTGATAGGATGAAAATGAAGCGCCCGAGAAGTACATTGCCAATTATTGATGCTGATTCAGAAAGTGGGATATGTCATATGATGAAAAGGCCCAGGCTTGAGGTGAACCAAACCCTCTTAGAGGAAATTAGAGCAATCAACAAACGACTAATAGACACTGTACTAGATATTAGTGACCAAGAGACTGCTCCATCAGTTAAGGATGGTGAACGAACTATTGTCAGGTGCTCCTTCGTTGGTGTGGCCATCAGTCCTAATCTGATGTCATCTCCAATGTTTCCACTCCAGCCTTTAAGATTGCTTGTGCCTGCAAACTATCCATTCAGCTCTCCTATATTTCTGGACAAGTTGACAGTGCAAGTCAAGGATGAGCTGGAAGATCTCTCAGCAAAGGTCATGTCAAAGCTAAGTCACTCTCTCCAGACCCTAGCGGAGCCCTTATCTCTTGGGGAGATAGCAAGGGTATGGGATACATGCGCCCGAGCGGTTGTCTGTGAATACGCACAACAGTCTGGGGGAGGAAGCTTCAGTTCCAAGTATGGAACCTGGGAAGATTTCCTCACTGTTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

735

Amino Acids

82.82

Weight (kDa)

8.92

Isoelectric Point (pI)

67.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000025)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31370 AT1G31380 AT1G31390 AT1G31400 AT2G01790 AT2G05400 AT2G05400 AT2G05400 AT2G05410 AT2G05410 AT2G05420 AT2G05430 AT2G42455 AT2G42460 AT2G42465 AT2G42470 AT2G42475 AT2G42480 AT3G27040 AT3G29580 AT3G44790 AT3G44800 AT3G44805 AT3G58200 AT3G58210 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58230 AT3G58240 AT3G58250 AT3G58260 AT3G58270 AT3G58270 AT3G58270 AT3G58280 AT3G58290 AT3G58290 AT3G58290 AT3G58300 AT3G58320 AT3G58330 AT3G58340 AT3G58340 AT3G58350 AT3G58350 AT3G58360 AT3G58370 AT3G58380 AT3G58400 AT3G58410 AT3G58410 AT3G58430 AT3G58430 AT3G58440 AT5G03550
fragaria_vesca FvH4_2g00084 FvH4_2g15701 FvH4_2g24334 FvH4_3g23322 FvH4_3g23322 FvH4_3g23322 FvH4_3g23482 FvH4_3g23482 FvH4_3g23482 FvH4_3g23491 FvH4_3g23492 FvH4_3g23510 FvH4_3g23520 FvH4_3g23520 FvH4_3g23520 FvH4_3g23580 FvH4_3g38842 FvH4_4g10396 FvH4_5g29370 FvH4_5g32130 FvH4_7g04570 FvH4_7g04571 FvH4_7g04741 FvH4_7g04741 FvH4_7g04750 FvH4_7g04750 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04770 FvH4_7g04770 FvH4_7g04770
malus_domestica MD00G1065000.v1.1 MD00G1065300.v1.1 MD02G1267400.v1.1 MD02G1267600.v1.1 MD02G1267700.v1.1 MD02G1267800.v1.1 MD02G1268100.v1.1 MD02G1268300.v1.1 MD02G1268400.v1.1 MD02G1268500.v1.1 MD03G1193600.v1.1 MD05G1071400.v1.1 MD07G1051000.v1.1 MD07G1051100.v1.1 MD07G1051200.v1.1 MD07G1051300.v1.1 MD07G1051500.v1.1 MD07G1051700.v1.1 MD07G1051800.v1.1 MD07G1085400.v1.1 MD07G1085500.v1.1 MD11G1177200.v1.1 MD11G1209800.v1.1 MD11G1209900.v1.1 MD11G1210000.v1.1 MD12G1048100.v1.1 MD12G1048600.v1.1 MD14G1046700.v1.1 MD14G1047400.v1.1
prunus_persica Prupe.2G051200_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052700_v2.0.a1 Prupe.2G052800_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G053100_v2.0.a1 Prupe.2G053300_v2.0.a1 Prupe.2G054800_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.4G223300_v2.0.a1 Prupe.4G223300_v2.0.a1
pyrus_communis pycom01g04720 pycom02g22950 pycom02g22960 pycom02g22970 pycom02g22990 pycom02g23000 pycom02g23010 pycom03g14600 pycom03g14610 pycom05g06150 pycom07g03820 pycom07g03830 pycom07g03850 pycom07g03860 pycom07g03880 pycom07g03890 pycom07g03900 pycom07g04000 pycom07g04010 pycom11g18540 pycom11g18560 pycom12g04190 pycom17g19100
rosa_chinensis RchiOBHm_Chr0c19g0500051 RchiOBHm_Chr1g0330011 RchiOBHm_Chr1g0330031 RchiOBHm_Chr1g0330041 RchiOBHm_Chr1g0330121 RchiOBHm_Chr1g0330141 RchiOBHm_Chr1g0330151 RchiOBHm_Chr1g0330181 RchiOBHm_Chr1g0330191 RchiOBHm_Chr1g0330201 RchiOBHm_Chr1g0330211 RchiOBHm_Chr1g0330221 RchiOBHm_Chr1g0367471 RchiOBHm_Chr2g0113311 RchiOBHm_Chr2g0148281 RchiOBHm_Chr4g0400061 RchiOBHm_Chr4g0437571 RchiOBHm_Chr5g0041361 RchiOBHm_Chr5g0041421 RchiOBHm_Chr5g0041481 RchiOBHm_Chr5g0041491 RchiOBHm_Chr5g0041501 RchiOBHm_Chr5g0041511 RchiOBHm_Chr5g0042491 RchiOBHm_Chr5g0042501 RchiOBHm_Chr6g0263551 RchiOBHm_Chr6g0286221 RchiOBHm_Chr7g0228171 RchiOBHm_Chr7g0231391 RchiOBHm_Chr7g0231401
rosa_laevigata RLG00000000870 RLG00000001420 RLG00000001582 RLG00000001602 RLG00000001700 RLG00000002476 RLG00000005787 RLG00000007689 RLG00000008446 RLG00000008811 RLG00000008812 RLG00000009013 RLG00000009942 RLG00000012752 RLG00000013511 RLG00000014053 RLG00000015257 RLG00000015258 RLG00000016149 RLG00000016691 RLG00000018661 RLG00000018662 RLG00000020991 RLG00000020992 RLG00000020993 RLG00000027309 RLG00000028568 RLG00000029119 RLG00000029371 RLG00000029563 RLG00000029818 RLG00000029819 RLG00000029821 RLG00000029822 RLG00000029824 RLG00000029827 RLG00000029828 RLG00000029829 RLG00000029841 RLG00000029843 RLG00000032676 RLG00000033366 RLG00000033367 RLG00000034023 RLG00000034066 RLG00000034072 RLG00000034073 RLG00000034074 RLG00000034130 RLG00000034133 RLG00000035487 RLG00000035488 RLG00000035793
rosa_multiflora Rmu_co8241405.1_g000001 Rmu_co8251033.1_g000001 Rmu_co8297611.1_g000001 Rmu_co8346639.1_g000001 Rmu_co8405917.1_g000001 Rmu_sc0000045.1_g000044 Rmu_sc0000061.1_g000032 Rmu_sc0000068.1_g000021 Rmu_sc0000068.1_g000022 Rmu_sc0000415.1_g000001 Rmu_sc0000499.1_g000003 Rmu_sc0000594.1_g000020 Rmu_sc0000673.1_g000007 Rmu_sc0000908.1_g000004 Rmu_sc0001123.1_g000013 Rmu_sc0001123.1_g000014 Rmu_sc0001167.1_g000026 Rmu_sc0001598.1_g000011 Rmu_sc0001696.1_g000003 Rmu_sc0001696.1_g000011 Rmu_sc0001696.1_g000019 Rmu_sc0001696.1_g000020 Rmu_sc0003007.1_g000016 Rmu_sc0003007.1_g000029 Rmu_sc0003051.1_g000010 Rmu_sc0003396.1_g000029 Rmu_sc0004798.1_g000020 Rmu_sc0005375.1_g000016 Rmu_sc0005375.1_g000017 Rmu_sc0005659.1_g000033 Rmu_sc0005659.1_g000034 Rmu_sc0006311.1_g000011 Rmu_sc0008249.1_g000002 Rmu_sc0008249.1_g000018 Rmu_sc0008600.1_g000014 Rmu_sc0009365.1_g000010 Rmu_sc0009365.1_g000022 Rmu_sc0009365.1_g000025 Rmu_sc0011112.1_g000008 Rmu_sc0011112.1_g000009 Rmu_sc0012031.1_g000020 Rmu_sc0013350.1_g000014 Rmu_sc0020359.1_g000004 Rmu_sc0021997.1_g000003 Rmu_sc0021997.1_g000004 Rmu_sc0023610.1_g000002 Rmu_sc0023611.1_g000001 Rmu_sc0028894.1_g000001 Rmu_sc0031050.1_g000001 Rmu_sc0041109.1_g000001 Rmu_ssc0000087.1_g000050 Rmu_ssc0000087.1_g000051 Rmu_ssc0000087.1_g000052 Rmu_ssc0000295.1_g000058 Rmu_ssc0000343.1_g000031 Rmu_ssc0000423.1_g000015 Rmu_ssc0000470.1_g000005 Rmu_ssc0000470.1_g000006
rosa_roxburghii Rroxscaffold_1G00005900 Rroxscaffold_1G00005910 Rroxscaffold_1G00012600 Rroxscaffold_1G00016860 Rroxscaffold_1G00032110 Rroxscaffold_1G00038140 Rroxscaffold_1G00038200 Rroxscaffold_1G00039020 Rroxscaffold_1G00039030 Rroxscaffold_1G00039080 Rroxscaffold_1G00039090 Rroxscaffold_1G00039270 Rroxscaffold_2G00097120 Rroxscaffold_2G00097130 Rroxscaffold_2G00137700 Rroxscaffold_2G00151740 Rroxscaffold_2G00151750 Rroxscaffold_3G00224160 Rroxscaffold_3G00224170 Rroxscaffold_3G00226080 Rroxscaffold_3G00226090 Rroxscaffold_3G00229350 Rroxscaffold_3G00231340 Rroxscaffold_4G00291390 Rroxscaffold_4G00316220 Rroxscaffold_4G00316230 Rroxscaffold_4G00320040 Rroxscaffold_4G00320050 Rroxscaffold_4G00320120 Rroxscaffold_4G00320140 Rroxscaffold_4G00320180 Rroxscaffold_4G00320270 Rroxscaffold_4G00320280 Rroxscaffold_4G00320290 Rroxscaffold_4G00320430 Rroxscaffold_4G00321910 Rroxscaffold_5G00348730 Rroxscaffold_5G00355020 Rroxscaffold_5G00355080 Rroxscaffold_5G00357490 Rroxscaffold_5G00376500 Rroxscaffold_5G00376510 Rroxscaffold_7G00179590 Rroxscaffold_7G00179600 Rroxscaffold_7G00198610
rosa_rugosa Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0086300 Rorug01G0086500 Rorug01G0087000 Rorug01G0087100 Rorug01G0087600 Rorug01G0087700 Rorug01G0087800 Rorug01G0087800 Rorug01G0302500 Rorug02G0249300 Rorug02G0249300 Rorug02G0249400 Rorug03G0189000 Rorug04G0181800 Rorug04G0283800.1 Rorug04G0283900.1 Rorug05G0043500 Rorug05G0191800 Rorug05G0191900 Rorug05G0192800 Rorug05G0192900 Rorug05G0193000 Rorug05G0201000 Rorug05G0201100 Rorug06G0173900 Rorug06G0173900 Rorug07G0009800 Rorug07G0246300.1 Rorug07G0246400
rosa_samantha Rh1AG103600 Rh1AG104800 Rh1AG105200 Rh1AG105300 Rh1AG105500 Rh1BG082000 Rh1BG082200 Rh1BG082300 Rh1BG082900 Rh1BG083000 Rh1BG083300 Rh1BG083500 Rh1BG083600 Rh1BG083800 Rh1BG083900 Rh1BG084000 Rh1BG084100 Rh1BG084200 Rh1BG092200 Rh1BG275300 Rh1CG098700 Rh1CG098800 Rh1CG100300 Rh1CG100400 Rh1CG100600 Rh1CG100900 Rh1CG101000 Rh1CG101700 Rh1DG066900 Rh1DG067000 Rh1DG106000 Rh1DG107600 Rh1DG107800 Rh1DG108100 Rh1DG108200 Rh1DG108600 Rh1DG108700 Rh1DG108900 Rh1DG109000 Rh1DG109100 Rh1DG109300 Rh1DG109400 Rh1DG109500 Rh1DG109700 Rh1DG109800 Rh1DG173900 Rh2AG270300 Rh2AG398900 Rh2CG245000 Rh2CG260700 Rh2CG278600 Rh2CG342400 Rh2CG385700 Rh3DG197200 Rh3DG197300 Rh4AG015100 Rh4BG347400 Rh4DG360400 Rh5AG278600 Rh5AG278700 Rh5AG286900 Rh5AG287000 Rh5BG282900 Rh5BG283000 Rh5BG283100 Rh5BG291400 Rh5CG314900 Rh5CG315100 Rh5CG315400 Rh5CG315700 Rh5CG315900 Rh5CG316000 Rh5CG323600 Rh5CG323700 Rh5DG291400 Rh5DG292300 Rh5DG292500 Rh5DG292700 Rh5DG292800 Rh5DG292900 Rh5DG301100 Rh5DG301200 Rh5DG301400 Rh5DG350900 Rh6BG407700 Rh6CG294900 Rh6DG286900 Rh7AG400400 Rh7AG420600 Rh7BG381700 Rh7BG395000 Rh7CG418600 Rh7CG440700 Rh7DG396500 Rh7DG413200
rosa_wichuraiana Rw1G003300 Rw1G008240 Rw1G008250 Rw1G008270 Rw1G008330 Rw1G008340 Rw1G008350 Rw1G008360 Rw1G008370 Rw1G008810 Rw1G021140 Rw3G020650 Rw5G026150 Rw5G026200 Rw5G026240 Rw5G026250 Rw5G026650 Rw5G030820 Rw7G006630 Rw7G030060 Rw7G034700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 625, 1030
AccBSI CCGCTC 1 cut(s) 2120
AccI GTMKAC 2 cut(s) 483, 694
AciI CCGC 6 cut(s) 218, 299, 1216, 1538, 2066, 2120
AcoI YGGCCR 1 cut(s) 1878
AcsI RAATTY 2 cut(s) 367, 1332
AcuI CTGAAG 4 cut(s) 1215, 1593, 1605, 2146
AdeI CACNNNGTG 1 cut(s) 1598
AfaI GTAC 6 cut(s) 980, 1086, 1474, 1633, 1669, 1797
AfiI CCNNNNNNNGG 2 cut(s) 53, 1756
AgsI TTSAA 5 cut(s) 367, 596, 782, 1318, 1487
AjnI CCWGG 2 cut(s) 1727, 2180
AleI CACNNNNGTG 1 cut(s) 729
Alw21I GWGCWC 2 cut(s) 1101, 1865
Alw26I GTCTC 5 cut(s) 9, 352, 563, 654, 1811
Alw44I GTGCAC 1 cut(s) 1097
AlwNI CAGNNNCTG 2 cut(s) 127, 901
Ama87I CYCGRG 2 cut(s) 1660, 2115
AoxI GGCC 2 cut(s) 1724, 1878
ApaLI GTGCAC 1 cut(s) 1097
ApeKI GCWGC 6 cut(s) 173, 220, 397, 424, 856, 1543
ApoI RAATTY 2 cut(s) 367, 1332
ArsI GACNNNNNNTTYG 2 cut(s) 2018, 2050
AseI ATTAAT 3 cut(s) 467, 1559, 1563
Asp700I GAANNNNTTC 3 cut(s) 717, 1200, 1336
AspLEI GCGC 2 cut(s) 1659, 2114
AspS9I GGNCC 3 cut(s) 296, 493, 1725
AsuC2I CCSGG 1 cut(s) 976
AsuHPI GGTGA 7 cut(s) 1163, 1192, 1314, 1353, 1582, 1750, 1853
AvaI CYCGRG 2 cut(s) 1660, 2115
AvaII GGWCC 2 cut(s) 296, 493
AxyI CCTNAGG 1 cut(s) 635
BaeGI GKGCMC 1 cut(s) 1101
BalI TGGCCA 1 cut(s) 1880
BanII GRGCYC 1 cut(s) 2073
BbsI GAAGAC 1 cut(s) 720
Bbv12I GWGCWC 2 cut(s) 1101, 1865
BbvI GCAGC 6 cut(s) 160, 232, 409, 436, 868, 1555
BccI CCATC 4 cut(s) 1471, 1832, 1834, 1889
BciT130I CCWGG 2 cut(s) 1729, 2182
BciVI GTATCC 1 cut(s) 2098
BcnI CCSGG 1 cut(s) 976
BcoDI GTCTC 5 cut(s) 9, 352, 563, 654, 1811
BfaI CTAG 5 cut(s) 569, 945, 1329, 1799, 2063
BfmI CTRYAG 1 cut(s) 1160
BfoI RGCGCY 1 cut(s) 1660
BfuI GTATCC 1 cut(s) 2098
BglII AGATCT 1 cut(s) 2014
BisI GCNGC 6 cut(s) 174, 221, 398, 425, 857, 1544
BlsI GCNGC 6 cut(s) 175, 222, 399, 426, 858, 1545
BmcAI AGTACT 1 cut(s) 1474
Bme1390I CCNGG 3 cut(s) 976, 1729, 2182
Bme18I GGWCC 2 cut(s) 296, 493
BmeT110I CYCGRG 2 cut(s) 1660, 2115
BmgT120I GGNCC 3 cut(s) 296, 493, 1725
BmiI GGNNCC 4 cut(s) 297, 1347, 2070, 2179
BmrFI CCNGG 3 cut(s) 976, 1729, 2182
BmsI GCATC 9 cut(s) 116, 244, 310, 378, 630, 843, 1300, 1525, 1675
BpiI GAAGAC 1 cut(s) 720
BpmI CTGGAG 3 cut(s) 545, 1904, 2039
BpuEI CTTGAG 3 cut(s) 374, 719, 1754
BpuMI CCSGG 1 cut(s) 976
BsaBI GATNNNNATC 1 cut(s) 957
BsaJI CCNNGG 4 cut(s) 678, 1350, 1727, 2181
Bsc4I CCNNNNNNNGG 2 cut(s) 53, 1756
Bse118I RCCGGY 1 cut(s) 1173
Bse1I ACTGG 1 cut(s) 1236
Bse21I CCTNAGG 1 cut(s) 635
Bse3DI GCAATG 3 cut(s) 871, 1614, 1670
Bse8I GATNNNNATC 1 cut(s) 957
BseBI CCWGG 2 cut(s) 1729, 2182
BseDI CCNNGG 4 cut(s) 678, 1350, 1727, 2181
BseGI GGATG 6 cut(s) 43, 645, 1132, 1650, 1843, 2008
BseJI GATNNNNATC 1 cut(s) 957
BseLI CCNNNNNNNGG 2 cut(s) 53, 1756
BseMI GCAATG 3 cut(s) 871, 1614, 1670
BseMII CTCAG 4 cut(s) 800, 908, 1371, 2034
BseNI ACTGG 1 cut(s) 1236
BseRI GAGGAG 1 cut(s) 175
BseSI GKGCMC 1 cut(s) 1101
BseXI GCAGC 6 cut(s) 160, 232, 409, 436, 868, 1555
BsgI GTGCAG 1 cut(s) 1562
BshFI GGCC 2 cut(s) 1726, 1880
BsiHKAI GWGCWC 2 cut(s) 1101, 1865
BsiHKCI CYCGRG 2 cut(s) 1660, 2115
BsiSI CCGG 2 cut(s) 975, 1174
BslFI GGGAC 1 cut(s) 987
BslI CCNNNNNNNGG 2 cut(s) 53, 1756
BsmAI GTCTC 5 cut(s) 9, 352, 563, 654, 1811
BsmFI GGGAC 1 cut(s) 987
BsmI GAATGC 2 cut(s) 109, 453
BsnI GGCC 2 cut(s) 1726, 1880
BsoBI CYCGRG 2 cut(s) 1660, 2115
Bsp1286I GDGCHC 3 cut(s) 1101, 1865, 2073
Bsp143I GATC 5 cut(s) 903, 958, 1222, 1275, 2014
BspACI CCGC 6 cut(s) 218, 299, 1216, 1538, 2066, 2120
BspANI GGCC 2 cut(s) 1726, 1880
BspCNI CTCAG 4 cut(s) 799, 907, 1372, 2033
BspHI TCATGA 1 cut(s) 304
BspLI GGNNCC 4 cut(s) 297, 1347, 2070, 2179
BspMAI CTGCAG 1 cut(s) 1164
BsrBI CCGCTC 1 cut(s) 2120
BsrDI GCAATG 3 cut(s) 871, 1614, 1670
BsrFI RCCGGY 1 cut(s) 1173
BsrI ACTGG 1 cut(s) 1236
BssAI RCCGGY 1 cut(s) 1173
BssECI CCNNGG 4 cut(s) 678, 1350, 1727, 2181
BssMI GATC 5 cut(s) 903, 958, 1222, 1275, 2014
BssT1I CCWWGG 2 cut(s) 678, 1350
Bst2UI CCWGG 2 cut(s) 1729, 2182
Bst4CI ACNGT 9 cut(s) 363, 581, 622, 826, 1525, 1795, 1990, 2145, 2200
Bst6I CTCTTC 1 cut(s) 783
BstAPI GCANNNNNTGC 3 cut(s) 1129, 1159, 1598
BstC8I GCNNGC 2 cut(s) 453, 1944
BstDEI CTNAG 8 cut(s) 635, 786, 894, 1380, 1389, 1753, 2020, 2042
BstENI CCTNNNNNAGG 1 cut(s) 1754
BstF5I GGATG 6 cut(s) 43, 645, 1132, 1650, 1843, 2008
BstH2I RGCGCY 1 cut(s) 1660
BstHHI GCGC 2 cut(s) 1659, 2114
BstKTI GATC 5 cut(s) 906, 961, 1225, 1278, 2017
BstMAI GTCTC 5 cut(s) 9, 352, 563, 654, 1811
BstMBI GATC 5 cut(s) 903, 958, 1222, 1275, 2014
BstNI CCWGG 2 cut(s) 1729, 2182
BstNSI RCATGY 3 cut(s) 86, 152, 2112
BstSCI CCNGG 3 cut(s) 974, 1727, 2180
BstSFI CTRYAG 1 cut(s) 1160
BstSLI GKGCMC 1 cut(s) 1101
BstV1I GCAGC 6 cut(s) 160, 232, 409, 436, 868, 1555
BstV2I GAAGAC 1 cut(s) 720
BstX2I RGATCY 1 cut(s) 2014
BstXI CCANNNNNNTGG 1 cut(s) 731
BstYI RGATCY 1 cut(s) 2014
Bsu36I CCTNAGG 1 cut(s) 635
BsuI GTATCC 1 cut(s) 2098
BsuRI GGCC 2 cut(s) 1726, 1880
BtsCI GGATG 6 cut(s) 43, 645, 1132, 1650, 1843, 2008
BtsIMutI CAGTG 6 cut(s) 524, 831, 1377, 1791, 1995, 2196
Cac8I GCNNGC 2 cut(s) 453, 1944
CaiI CAGNNNCTG 2 cut(s) 127, 901
CciI TCATGA 1 cut(s) 304
CfoI GCGC 2 cut(s) 1659, 2114
Cfr10I RCCGGY 1 cut(s) 1173
Cfr13I GGNCC 3 cut(s) 296, 493, 1725
CseI GACGC 2 cut(s) 734, 1114
Csp6I GTAC 6 cut(s) 979, 1085, 1473, 1632, 1668, 1796
CviAII CATG 8 cut(s) 83, 149, 305, 729, 914, 1579, 2032, 2109
CviQI GTAC 6 cut(s) 979, 1085, 1473, 1632, 1668, 1796
DdeI CTNAG 8 cut(s) 635, 786, 894, 1380, 1389, 1753, 2020, 2042
DpnI GATC 5 cut(s) 905, 960, 1224, 1277, 2016
DpnII GATC 5 cut(s) 903, 958, 1222, 1275, 2014
DraIII CACNNNGTG 1 cut(s) 1598
DrdI GACNNNNNNGTC 2 cut(s) 625, 1030
DseDI GACNNNNNNGTC 2 cut(s) 625, 1030
EaeI YGGCCR 1 cut(s) 1878
Eam1104I CTCTTC 1 cut(s) 783
EarI CTCTTC 1 cut(s) 783
Eco130I CCWWGG 2 cut(s) 678, 1350
Eco24I GRGCYC 1 cut(s) 2073
Eco47I GGWCC 2 cut(s) 296, 493
Eco57I CTGAAG 4 cut(s) 1215, 1593, 1605, 2146
Eco81I CCTNAGG 1 cut(s) 635
Eco88I CYCGRG 2 cut(s) 1660, 2115
EcoNI CCTNNNNNAGG 1 cut(s) 1754
EcoRI GAATTC 1 cut(s) 367
EcoRII CCWGG 2 cut(s) 1727, 2180
EcoT14I CCWWGG 2 cut(s) 678, 1350
EcoT22I ATGCAT 2 cut(s) 109, 1293
EcoT38I GRGCYC 1 cut(s) 2073
ErhI CCWWGG 2 cut(s) 678, 1350
FaeI CATG 8 cut(s) 86, 152, 308, 732, 917, 1582, 2035, 2112
FalI AAGNNNNNCTT 2 cut(s) 1462, 1494
FaqI GGGAC 1 cut(s) 987
FatI CATG 8 cut(s) 82, 148, 304, 728, 913, 1578, 2031, 2108
FauI CCCGC 1 cut(s) 1209
FauNDI CATATG 2 cut(s) 1505, 1713
FblI GTMKAC 2 cut(s) 483, 694
Fnu4HI GCNGC 6 cut(s) 174, 221, 398, 425, 857, 1544
FokI GGATG 6 cut(s) 30, 652, 1139, 1657, 1850, 2015
FriOI GRGCYC 1 cut(s) 2073
Fsp4HI GCNGC 6 cut(s) 174, 221, 398, 425, 857, 1544
FspBI CTAG 5 cut(s) 569, 945, 1329, 1799, 2063
GlaI GCGC 2 cut(s) 1658, 2113
GluI GCNGC 6 cut(s) 174, 221, 398, 425, 857, 1544
GsuI CTGGAG 3 cut(s) 545, 1904, 2039
HaeII RGCGCY 1 cut(s) 1660
HaeIII GGCC 2 cut(s) 1726, 1880
HapII CCGG 2 cut(s) 975, 1174
HgaI GACGC 2 cut(s) 734, 1114
HhaI GCGC 2 cut(s) 1659, 2114
Hin1II CATG 8 cut(s) 86, 152, 308, 732, 917, 1582, 2035, 2112
Hin6I GCGC 2 cut(s) 1657, 2112
HinP1I GCGC 2 cut(s) 1657, 2112
HincII GTYRAC 3 cut(s) 201, 1241, 1986
HindII GTYRAC 3 cut(s) 201, 1241, 1986
HindIII AAGCTT 2 cut(s) 1197, 2158
HpaII CCGG 2 cut(s) 975, 1174
HphI GGTGA 7 cut(s) 1163, 1192, 1314, 1353, 1582, 1750, 1853
Hpy188III TCNNGA 8 cut(s) 305, 353, 562, 907, 1074, 1329, 1976, 2056
HpyAV CCTTC 3 cut(s) 467, 1292, 1876
HpyCH4III ACNGT 9 cut(s) 363, 581, 622, 826, 1525, 1795, 1990, 2145, 2200
HpyF3I CTNAG 8 cut(s) 635, 786, 894, 1380, 1389, 1753, 2020, 2042
Hsp92II CATG 8 cut(s) 86, 152, 308, 732, 917, 1582, 2035, 2112
HspAI GCGC 2 cut(s) 1657, 2112
Kzo9I GATC 5 cut(s) 903, 958, 1222, 1275, 2014
LmnI GCTCC 5 cut(s) 91, 1351, 1828, 1868, 2068
Lsp1109I GCAGC 6 cut(s) 160, 232, 409, 436, 868, 1555
LweI GCATC 9 cut(s) 116, 244, 310, 378, 630, 843, 1300, 1525, 1675
MaeI CTAG 5 cut(s) 569, 945, 1329, 1799, 2063
MaeIII GTNAC 6 cut(s) 267, 868, 1032, 1359, 1808, 2045
MalI GATC 5 cut(s) 905, 960, 1224, 1277, 2016
MbiI CCGCTC 1 cut(s) 2120
MboI GATC 5 cut(s) 903, 958, 1222, 1275, 2014
MfeI CAATTG 2 cut(s) 311, 749
MflI RGATCY 1 cut(s) 2014
MhlI GDGCHC 3 cut(s) 1101, 1865, 2073
MlsI TGGCCA 1 cut(s) 1880
MluNI TGGCCA 1 cut(s) 1880
MlyI GAGTC 4 cut(s) 133, 769, 1079, 1370
MmeI TCCRAC 2 cut(s) 1431, 1518
Mox20I TGGCCA 1 cut(s) 1880
Mph1103I ATGCAT 2 cut(s) 109, 1293
MroXI GAANNNNTTC 3 cut(s) 717, 1200, 1336
MscI TGGCCA 1 cut(s) 1880
MslI CAYNNNNRTG 2 cut(s) 102, 729
Msp20I TGGCCA 1 cut(s) 1880
MspA1I CMGCKG 1 cut(s) 247
MspI CCGG 2 cut(s) 975, 1174
MspR9I CCNGG 3 cut(s) 976, 1729, 2182
MunI CAATTG 2 cut(s) 311, 749
Mva1269I GAATGC 2 cut(s) 109, 453
MvaI CCWGG 2 cut(s) 1729, 2182
NciI CCSGG 1 cut(s) 976
NdeI CATATG 2 cut(s) 1505, 1713
NdeII GATC 5 cut(s) 903, 958, 1222, 1275, 2014
NlaIII CATG 8 cut(s) 86, 152, 308, 732, 917, 1582, 2035, 2112
NlaIV GGNNCC 4 cut(s) 297, 1347, 2070, 2179
NmuCI GTSAC 5 cut(s) 868, 1032, 1359, 1808, 2045
NsiI ATGCAT 2 cut(s) 109, 1293
NspI RCATGY 3 cut(s) 86, 152, 2112
OliI CACNNNNGTG 1 cut(s) 729
PacI TTAATTAA 1 cut(s) 1563
PagI TCATGA 1 cut(s) 304
PctI GAATGC 2 cut(s) 109, 453
PdmI GAANNNNTTC 3 cut(s) 717, 1200, 1336
PfeI GAWTC 7 cut(s) 193, 767, 890, 953, 1168, 1529, 1691
PkrI GCNGC 6 cut(s) 175, 222, 399, 426, 858, 1545
PleI GAGTC 4 cut(s) 132, 769, 1078, 1370
PpsI GAGTC 4 cut(s) 132, 769, 1078, 1370
PshBI ATTAAT 3 cut(s) 467, 1559, 1563
Psp6I CCWGG 2 cut(s) 1727, 2180
PspGI CCWGG 2 cut(s) 1727, 2180
PspN4I GGNNCC 4 cut(s) 297, 1347, 2070, 2179
PspPI GGNCC 3 cut(s) 296, 493, 1725
PstI CTGCAG 1 cut(s) 1164
PstNI CAGNNNCTG 2 cut(s) 127, 901
PsuI RGATCY 1 cut(s) 2014
PvuII CAGCTG 1 cut(s) 247
RsaI GTAC 6 cut(s) 980, 1086, 1474, 1633, 1669, 1797
RsaNI GTAC 6 cut(s) 979, 1085, 1473, 1632, 1668, 1796
RseI CAYNNNNRTG 2 cut(s) 102, 729
SatI GCNGC 6 cut(s) 174, 221, 398, 425, 857, 1544
Sau3AI GATC 5 cut(s) 903, 958, 1222, 1275, 2014
Sau96I GGNCC 3 cut(s) 296, 493, 1725
ScaI AGTACT 1 cut(s) 1474
SchI GAGTC 4 cut(s) 133, 769, 1079, 1370
ScrFI CCNGG 3 cut(s) 976, 1729, 2182
SduI GDGCHC 3 cut(s) 1101, 1865, 2073
SfaNI GCATC 9 cut(s) 116, 244, 310, 378, 630, 843, 1300, 1525, 1675
SfcI CTRYAG 1 cut(s) 1160
SinI GGWCC 2 cut(s) 296, 493
SmiMI CAYNNNNRTG 2 cut(s) 102, 729
SmlI CTYRAG 3 cut(s) 353, 698, 1733
SmoI CTYRAG 3 cut(s) 353, 698, 1733
SsiI CCGC 6 cut(s) 218, 299, 1216, 1538, 2066, 2120
SspI AATATT 1 cut(s) 1426
SspMI CTAG 5 cut(s) 569, 945, 1329, 1799, 2063
StyD4I CCNGG 3 cut(s) 974, 1727, 2180
StyI CCWWGG 2 cut(s) 678, 1350
TaaI ACNGT 9 cut(s) 363, 581, 622, 826, 1525, 1795, 1990, 2145, 2200
TaqI TCGA 4 cut(s) 210, 711, 906, 1090
TatI WGTACW 3 cut(s) 1472, 1667, 1795
TfiI GAWTC 7 cut(s) 193, 767, 890, 953, 1168, 1529, 1691
TscAI CASTG 6 cut(s) 531, 831, 1377, 1798, 1995, 2203
TseFI GTSAC 5 cut(s) 868, 1032, 1359, 1808, 2045
TseI GCWGC 6 cut(s) 173, 220, 397, 424, 856, 1543
Tsp45I GTSAC 5 cut(s) 868, 1032, 1359, 1808, 2045
TspDTI ATGAA 8 cut(s) 86, 531, 899, 1449, 1541, 1661, 1667, 1733
TspRI CASTG 6 cut(s) 531, 831, 1377, 1798, 1995, 2203
VneI GTGCAC 1 cut(s) 1097
VpaK11BI GGWCC 2 cut(s) 296, 493
VspI ATTAAT 3 cut(s) 467, 1559, 1563
XagI CCTNNNNNAGG 1 cut(s) 1754
XapI RAATTY 2 cut(s) 367, 1332
XbaI TCTAGA 1 cut(s) 1328
XceI RCATGY 3 cut(s) 86, 152, 2112
XcmI CCANNNNNNNNNTGG 2 cut(s) 466, 685
XmiI GTMKAC 2 cut(s) 483, 694
XmnI GAANNNNTTC 3 cut(s) 717, 1200, 1336
XspI CTAG 5 cut(s) 569, 945, 1329, 1799, 2063
ZrmI AGTACT 1 cut(s) 1474
Zsp2I ATGCAT 2 cut(s) 109, 1293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.