Plant mobile domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 3 - 181 | 6.6e-10 | Plant mobile domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1006 |
| Acc16I | TGCGCA | 2 cut(s) | 283, 1676 |
| AccIII | TCCGGA | 1 cut(s) | 893 |
| AclWI | GGATC | 3 cut(s) | 207, 770, 1399 |
| AcsI | RAATTY | 3 cut(s) | 806, 1402, 1799 |
| AcuI | CTGAAG | 3 cut(s) | 1014, 1335, 1626 |
| AfaI | GTAC | 3 cut(s) | 353, 509, 1160 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 77, 932 |
| AflII | CTTAAG | 1 cut(s) | 1196 |
| AflIII | ACRYGT | 3 cut(s) | 419, 1155, 1920 |
| AgeI | ACCGGT | 1 cut(s) | 1001 |
| AjnI | CCWGG | 1 cut(s) | 600 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 635, 667 |
| AluBI | AGCT | 8 cut(s) | 41, 544, 671, 710, 943, 1217, 1313, 1909 |
| AluI | AGCT | 8 cut(s) | 41, 544, 671, 710, 943, 1217, 1313, 1909 |
| Alw21I | GWGCWC | 3 cut(s) | 712, 1247, 1933 |
| Alw26I | GTCTC | 2 cut(s) | 97, 1363 |
| Alw44I | GTGCAC | 2 cut(s) | 1243, 1929 |
| AlwI | GGATC | 3 cut(s) | 207, 770, 1399 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 44 |
| Aor13HI | TCCGGA | 1 cut(s) | 893 |
| AoxI | GGCC | 1 cut(s) | 264 |
| ApaLI | GTGCAC | 2 cut(s) | 1243, 1929 |
| ApeKI | GCWGC | 9 cut(s) | 41, 98, 597, 850, 853, 937, 940, 1217, 1228 |
| ApoI | RAATTY | 3 cut(s) | 806, 1402, 1799 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 563, 595 |
| AsiGI | ACCGGT | 1 cut(s) | 1001 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 198, 1656 |
| AspLEI | GCGC | 2 cut(s) | 284, 1677 |
| AsuHPI | GGTGA | 2 cut(s) | 128, 1509 |
| AsuNHI | GCTAGC | 1 cut(s) | 394 |
| BaeGI | GKGCMC | 2 cut(s) | 1247, 1933 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1283, 1316 |
| BanII | GRGCYC | 1 cut(s) | 712 |
| BbsI | GAAGAC | 4 cut(s) | 1059, 1614, 1826, 1923 |
| Bbv12I | GWGCWC | 3 cut(s) | 712, 1247, 1933 |
| BbvCI | CCTCAGC | 1 cut(s) | 731 |
| BbvI | GCAGC | 9 cut(s) | 28, 110, 609, 862, 865, 949, 952, 1204, 1215 |
| BccI | CCATC | 2 cut(s) | 1216, 1331 |
| BciT130I | CCWGG | 1 cut(s) | 602 |
| BciVI | GTATCC | 1 cut(s) | 1245 |
| BclI | TGATCA | 2 cut(s) | 129, 1596 |
| BcoDI | GTCTC | 2 cut(s) | 97, 1363 |
| BfaI | CTAG | 3 cut(s) | 395, 594, 1248 |
| BfmI | CTRYAG | 1 cut(s) | 887 |
| BfrI | CTTAAG | 1 cut(s) | 1196 |
| BfuI | GTATCC | 1 cut(s) | 1245 |
| BisI | GCNGC | 9 cut(s) | 42, 99, 598, 851, 854, 938, 941, 1218, 1229 |
| BlsI | GCNGC | 9 cut(s) | 43, 100, 599, 852, 855, 939, 942, 1219, 1230 |
| Bme1390I | CCNGG | 1 cut(s) | 602 |
| BmiI | GGNNCC | 1 cut(s) | 308 |
| BmrFI | CCNGG | 1 cut(s) | 602 |
| BmsI | GCATC | 6 cut(s) | 293, 367, 425, 576, 982, 1740 |
| BmtI | GCTAGC | 1 cut(s) | 398 |
| BpiI | GAAGAC | 4 cut(s) | 1059, 1614, 1826, 1923 |
| BpmI | CTGGAG | 3 cut(s) | 641, 1129, 1155 |
| Bpu10I | CCTNAGC | 2 cut(s) | 731, 1628 |
| BpuEI | CTTGAG | 1 cut(s) | 274 |
| BsaBI | GATNNNNATC | 2 cut(s) | 921, 1207 |
| BsaJI | CCNNGG | 1 cut(s) | 1471 |
| BsaWI | WCCGGW | 2 cut(s) | 893, 1001 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 77, 932 |
| Bse118I | RCCGGY | 1 cut(s) | 1001 |
| Bse1I | ACTGG | 4 cut(s) | 10, 387, 624, 1097 |
| Bse3DI | GCAATG | 1 cut(s) | 637 |
| Bse8I | GATNNNNATC | 2 cut(s) | 921, 1207 |
| BseAI | TCCGGA | 1 cut(s) | 893 |
| BseBI | CCWGG | 1 cut(s) | 602 |
| BseDI | CCNNGG | 1 cut(s) | 1471 |
| BseGI | GGATG | 7 cut(s) | 440, 805, 829, 922, 1342, 1587, 1755 |
| BseJI | GATNNNNATC | 2 cut(s) | 921, 1207 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 77, 932 |
| BseMI | GCAATG | 1 cut(s) | 637 |
| BseMII | CTCAG | 4 cut(s) | 722, 834, 921, 1103 |
| BseNI | ACTGG | 4 cut(s) | 10, 387, 624, 1097 |
| BseRI | GAGGAG | 4 cut(s) | 707, 748, 1158, 1804 |
| BseSI | GKGCMC | 2 cut(s) | 1247, 1933 |
| BseXI | GCAGC | 9 cut(s) | 28, 110, 609, 862, 865, 949, 952, 1204, 1215 |
| BsgI | GTGCAG | 1 cut(s) | 869 |
| Bsh1285I | CGRYCG | 1 cut(s) | 157 |
| BshFI | GGCC | 1 cut(s) | 266 |
| BshTI | ACCGGT | 1 cut(s) | 1001 |
| BsiEI | CGRYCG | 1 cut(s) | 157 |
| BsiHKAI | GWGCWC | 3 cut(s) | 712, 1247, 1933 |
| BsiSI | CCGG | 2 cut(s) | 894, 1002 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 77, 932 |
| BsmAI | GTCTC | 2 cut(s) | 97, 1363 |
| BsmI | GAATGC | 2 cut(s) | 1049, 1720 |
| BsnI | GGCC | 1 cut(s) | 266 |
| Bsp1286I | GDGCHC | 3 cut(s) | 712, 1247, 1933 |
| Bsp13I | TCCGGA | 1 cut(s) | 893 |
| Bsp143I | GATC | 8 cut(s) | 129, 154, 212, 249, 762, 1202, 1391, 1596 |
| BspANI | GGCC | 1 cut(s) | 266 |
| BspCNI | CTCAG | 4 cut(s) | 723, 835, 922, 1104 |
| BspEI | TCCGGA | 1 cut(s) | 893 |
| BspHI | TCATGA | 1 cut(s) | 1479 |
| BspLI | GGNNCC | 1 cut(s) | 308 |
| BspOI | GCTAGC | 1 cut(s) | 398 |
| BspPI | GGATC | 3 cut(s) | 207, 770, 1399 |
| BspTI | CTTAAG | 1 cut(s) | 1196 |
| BsrDI | GCAATG | 1 cut(s) | 637 |
| BsrFI | RCCGGY | 1 cut(s) | 1001 |
| BsrI | ACTGG | 4 cut(s) | 10, 387, 624, 1097 |
| BssAI | RCCGGY | 1 cut(s) | 1001 |
| BssECI | CCNNGG | 1 cut(s) | 1471 |
| BssMI | GATC | 8 cut(s) | 129, 154, 212, 249, 762, 1202, 1391, 1596 |
| BssT1I | CCWWGG | 1 cut(s) | 1471 |
| Bst2UI | CCWGG | 1 cut(s) | 602 |
| Bst4CI | ACNGT | 5 cut(s) | 108, 891, 1329, 1347, 1574 |
| Bst6I | CTCTTC | 4 cut(s) | 78, 498, 752, 1065 |
| BstAFI | CTTAAG | 1 cut(s) | 1196 |
| BstC8I | GCNNGC | 3 cut(s) | 396, 770, 858 |
| BstDEI | CTNAG | 7 cut(s) | 274, 731, 843, 930, 1112, 1564, 1628 |
| BstF5I | GGATG | 7 cut(s) | 440, 805, 829, 922, 1342, 1587, 1755 |
| BstHHI | GCGC | 2 cut(s) | 284, 1677 |
| BstKTI | GATC | 8 cut(s) | 132, 157, 215, 252, 765, 1205, 1394, 1599 |
| BstMAI | GTCTC | 2 cut(s) | 97, 1363 |
| BstMBI | GATC | 8 cut(s) | 129, 154, 212, 249, 762, 1202, 1391, 1596 |
| BstMCI | CGRYCG | 1 cut(s) | 157 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 541 |
| BstNI | CCWGG | 1 cut(s) | 602 |
| BstNSI | RCATGY | 5 cut(s) | 423, 551, 860, 1159, 1924 |
| BstSCI | CCNGG | 1 cut(s) | 600 |
| BstSFI | CTRYAG | 1 cut(s) | 887 |
| BstSLI | GKGCMC | 2 cut(s) | 1247, 1933 |
| BstV1I | GCAGC | 9 cut(s) | 28, 110, 609, 862, 865, 949, 952, 1204, 1215 |
| BstV2I | GAAGAC | 4 cut(s) | 1059, 1614, 1826, 1923 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1726 |
| BsuI | GTATCC | 1 cut(s) | 1245 |
| BsuRI | GGCC | 1 cut(s) | 266 |
| BtsCI | GGATG | 7 cut(s) | 440, 805, 829, 922, 1342, 1587, 1755 |
| BtsI | GCAGTG | 1 cut(s) | 1743 |
| BtsIMutI | CAGTG | 8 cut(s) | 380, 567, 987, 1038, 1104, 1509, 1570, 1743 |
| Cac8I | GCNNGC | 3 cut(s) | 396, 770, 858 |
| CaiI | CAGNNNCTG | 1 cut(s) | 44 |
| CciI | TCATGA | 1 cut(s) | 1479 |
| CfoI | GCGC | 2 cut(s) | 284, 1677 |
| Cfr10I | RCCGGY | 1 cut(s) | 1001 |
| Csp6I | GTAC | 3 cut(s) | 352, 508, 1159 |
| CspAI | ACCGGT | 1 cut(s) | 1001 |
| CviQI | GTAC | 3 cut(s) | 352, 508, 1159 |
| DdeI | CTNAG | 7 cut(s) | 274, 731, 843, 930, 1112, 1564, 1628 |
| DpnI | GATC | 8 cut(s) | 131, 156, 214, 251, 764, 1204, 1393, 1598 |
| DpnII | GATC | 8 cut(s) | 129, 154, 212, 249, 762, 1202, 1391, 1596 |
| DraI | TTTAAA | 1 cut(s) | 675 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1006 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1006 |
| Eam1104I | CTCTTC | 4 cut(s) | 78, 498, 752, 1065 |
| EarI | CTCTTC | 4 cut(s) | 78, 498, 752, 1065 |
| Ecl136II | GAGCTC | 1 cut(s) | 710 |
| Eco130I | CCWWGG | 1 cut(s) | 1471 |
| Eco24I | GRGCYC | 1 cut(s) | 712 |
| Eco53kI | GAGCTC | 1 cut(s) | 710 |
| Eco57I | CTGAAG | 3 cut(s) | 1014, 1335, 1626 |
| EcoICRI | GAGCTC | 1 cut(s) | 710 |
| EcoRII | CCWGG | 1 cut(s) | 600 |
| EcoT14I | CCWWGG | 1 cut(s) | 1471 |
| EcoT38I | GRGCYC | 1 cut(s) | 712 |
| ErhI | CCWWGG | 1 cut(s) | 1471 |
| FauNDI | CATATG | 1 cut(s) | 1489 |
| FbaI | TGATCA | 2 cut(s) | 129, 1596 |
| Fnu4HI | GCNGC | 9 cut(s) | 42, 99, 598, 851, 854, 938, 941, 1218, 1229 |
| FokI | GGATG | 7 cut(s) | 447, 812, 836, 929, 1349, 1574, 1762 |
| FriOI | GRGCYC | 1 cut(s) | 712 |
| Fsp4HI | GCNGC | 9 cut(s) | 42, 99, 598, 851, 854, 938, 941, 1218, 1229 |
| FspAI | RTGCGCAY | 1 cut(s) | 283 |
| FspBI | CTAG | 3 cut(s) | 395, 594, 1248 |
| FspI | TGCGCA | 2 cut(s) | 283, 1676 |
| GlaI | GCGC | 2 cut(s) | 283, 1676 |
| GluI | GCNGC | 9 cut(s) | 42, 99, 598, 851, 854, 938, 941, 1218, 1229 |
| GsuI | CTGGAG | 3 cut(s) | 641, 1129, 1155 |
| HaeIII | GGCC | 1 cut(s) | 266 |
| HapII | CCGG | 2 cut(s) | 894, 1002 |
| HhaI | GCGC | 2 cut(s) | 284, 1677 |
| Hin6I | GCGC | 2 cut(s) | 282, 1675 |
| HinP1I | GCGC | 2 cut(s) | 282, 1675 |
| HindIII | AAGCTT | 1 cut(s) | 669 |
| HinfI | GANTC | 9 cut(s) | 67, 739, 866, 1142, 1236, 1476, 1499, 1558, 1657 |
| HpaII | CCGG | 2 cut(s) | 894, 1002 |
| HphI | GGTGA | 2 cut(s) | 128, 1509 |
| Hpy166II | GTNNAC | 3 cut(s) | 985, 1245, 1931 |
| Hpy188I | TCNGA | 5 cut(s) | 331, 540, 871, 1012, 1808 |
| Hpy188III | TCNNGA | 8 cut(s) | 253, 288, 432, 894, 1172, 1480, 1600, 1691 |
| Hpy8I | GTNNAC | 3 cut(s) | 985, 1245, 1931 |
| HpyAV | CCTTC | 5 cut(s) | 637, 698, 907, 1382, 1636 |
| HpyCH4III | ACNGT | 5 cut(s) | 108, 891, 1329, 1347, 1574 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 541 |
| HpyF3I | CTNAG | 7 cut(s) | 274, 731, 843, 930, 1112, 1564, 1628 |
| HspAI | GCGC | 2 cut(s) | 282, 1675 |
| Kpn2I | TCCGGA | 1 cut(s) | 893 |
| Ksp22I | TGATCA | 2 cut(s) | 129, 1596 |
| Kzo9I | GATC | 8 cut(s) | 129, 154, 212, 249, 762, 1202, 1391, 1596 |
| LmnI | GCTCC | 2 cut(s) | 707, 896 |
| Lsp1109I | GCAGC | 9 cut(s) | 28, 110, 609, 862, 865, 949, 952, 1204, 1215 |
| LweI | GCATC | 6 cut(s) | 293, 367, 425, 576, 982, 1740 |
| MaeI | CTAG | 3 cut(s) | 395, 594, 1248 |
| MaeIII | GTNAC | 3 cut(s) | 116, 1574, 1738 |
| MalI | GATC | 8 cut(s) | 131, 156, 214, 251, 764, 1204, 1393, 1598 |
| MboI | GATC | 8 cut(s) | 129, 154, 212, 249, 762, 1202, 1391, 1596 |
| MfeI | CAATTG | 1 cut(s) | 355 |
| MhlI | GDGCHC | 3 cut(s) | 712, 1247, 1933 |
| MluCI | AATT | 7 cut(s) | 355, 697, 806, 954, 1402, 1799, 1945 |
| MlyI | GAGTC | 3 cut(s) | 1136, 1245, 1552 |
| MmeI | TCCRAC | 3 cut(s) | 540, 633, 1476 |
| MroI | TCCGGA | 1 cut(s) | 893 |
| MroXI | GAANNNNTTC | 2 cut(s) | 198, 1656 |
| MseI | TTAA | 3 cut(s) | 674, 1197, 1904 |
| MslI | CAYNNNNRTG | 2 cut(s) | 125, 301 |
| MspA1I | CMGCKG | 1 cut(s) | 41 |
| MspCI | CTTAAG | 1 cut(s) | 1196 |
| MspI | CCGG | 2 cut(s) | 894, 1002 |
| MspR9I | CCNGG | 1 cut(s) | 602 |
| MunI | CAATTG | 1 cut(s) | 355 |
| Mva1269I | GAATGC | 2 cut(s) | 1049, 1720 |
| MvaI | CCWGG | 1 cut(s) | 602 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 541 |
| NdeI | CATATG | 1 cut(s) | 1489 |
| NdeII | GATC | 8 cut(s) | 129, 154, 212, 249, 762, 1202, 1391, 1596 |
| NheI | GCTAGC | 1 cut(s) | 394 |
| NlaIV | GGNNCC | 1 cut(s) | 308 |
| NmuCI | GTSAC | 3 cut(s) | 116, 1574, 1738 |
| NsbI | TGCGCA | 2 cut(s) | 283, 1676 |
| NspI | RCATGY | 5 cut(s) | 423, 551, 860, 1159, 1924 |
| PaeI | GCATGC | 1 cut(s) | 860 |
| PagI | TCATGA | 1 cut(s) | 1479 |
| PciI | ACATGT | 3 cut(s) | 419, 1155, 1920 |
| PctI | GAATGC | 2 cut(s) | 1049, 1720 |
| PdmI | GAANNNNTTC | 2 cut(s) | 198, 1656 |
| PfeI | GAWTC | 6 cut(s) | 67, 739, 866, 1476, 1499, 1657 |
| PinAI | ACCGGT | 1 cut(s) | 1001 |
| PkrI | GCNGC | 9 cut(s) | 43, 100, 599, 852, 855, 939, 942, 1219, 1230 |
| Ple19I | CGATCG | 1 cut(s) | 157 |
| PleI | GAGTC | 3 cut(s) | 1136, 1244, 1552 |
| PpsI | GAGTC | 3 cut(s) | 1136, 1244, 1552 |
| PscI | ACATGT | 3 cut(s) | 419, 1155, 1920 |
| Psp124BI | GAGCTC | 1 cut(s) | 712 |
| Psp6I | CCWGG | 1 cut(s) | 600 |
| PspGI | CCWGG | 1 cut(s) | 600 |
| PspN4I | GGNNCC | 1 cut(s) | 308 |
| PstNI | CAGNNNCTG | 1 cut(s) | 44 |
| PvuI | CGATCG | 1 cut(s) | 157 |
| PvuII | CAGCTG | 1 cut(s) | 41 |
| RsaI | GTAC | 3 cut(s) | 353, 509, 1160 |
| RsaNI | GTAC | 3 cut(s) | 352, 508, 1159 |
| RseI | CAYNNNNRTG | 2 cut(s) | 125, 301 |
| SacI | GAGCTC | 1 cut(s) | 712 |
| SaqAI | TTAA | 3 cut(s) | 674, 1197, 1904 |
| SatI | GCNGC | 9 cut(s) | 42, 99, 598, 851, 854, 938, 941, 1218, 1229 |
| Sau3AI | GATC | 8 cut(s) | 129, 154, 212, 249, 762, 1202, 1391, 1596 |
| SchI | GAGTC | 3 cut(s) | 1136, 1245, 1552 |
| ScrFI | CCNGG | 1 cut(s) | 602 |
| SduI | GDGCHC | 3 cut(s) | 712, 1247, 1933 |
| SfaNI | GCATC | 6 cut(s) | 293, 367, 425, 576, 982, 1740 |
| SfcI | CTRYAG | 1 cut(s) | 887 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 125, 301 |
| SmlI | CTYRAG | 2 cut(s) | 253, 1196 |
| SmoI | CTYRAG | 2 cut(s) | 253, 1196 |
| SphI | GCATGC | 1 cut(s) | 860 |
| Sse9I | AATT | 7 cut(s) | 355, 697, 806, 954, 1402, 1799, 1945 |
| SspMI | CTAG | 3 cut(s) | 395, 594, 1248 |
| SstI | GAGCTC | 1 cut(s) | 712 |
| StyD4I | CCNGG | 1 cut(s) | 600 |
| StyI | CCWWGG | 1 cut(s) | 1471 |
| TaaI | ACNGT | 5 cut(s) | 108, 891, 1329, 1347, 1574 |
| TaqI | TCGA | 1 cut(s) | 775 |
| TasI | AATT | 7 cut(s) | 355, 697, 806, 954, 1402, 1799, 1945 |
| TatI | WGTACW | 2 cut(s) | 351, 507 |
| TfiI | GAWTC | 6 cut(s) | 67, 739, 866, 1476, 1499, 1657 |
| Tru1I | TTAA | 3 cut(s) | 674, 1197, 1904 |
| Tru9I | TTAA | 3 cut(s) | 674, 1197, 1904 |
| TscAI | CASTG | 8 cut(s) | 387, 574, 994, 1038, 1104, 1509, 1577, 1743 |
| TseFI | GTSAC | 3 cut(s) | 116, 1574, 1738 |
| TseI | GCWGC | 9 cut(s) | 41, 98, 597, 850, 853, 937, 940, 1217, 1228 |
| Tsp45I | GTSAC | 3 cut(s) | 116, 1574, 1738 |
| TspRI | CASTG | 8 cut(s) | 387, 574, 994, 1038, 1104, 1509, 1577, 1743 |
| Vha464I | CTTAAG | 1 cut(s) | 1196 |
| VneI | GTGCAC | 2 cut(s) | 1243, 1929 |
| XapI | RAATTY | 3 cut(s) | 806, 1402, 1799 |
| XceI | RCATGY | 5 cut(s) | 423, 551, 860, 1159, 1924 |
| XmnI | GAANNNNTTC | 2 cut(s) | 198, 1656 |
| XspI | CTAG | 3 cut(s) | 395, 594, 1248 |