protein modification by small protein conjugation or removal
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 505 |
| AciI | CCGC | 1 cut(s) | 315 |
| AclWI | GGATC | 2 cut(s) | 705, 791 |
| AcsI | RAATTY | 3 cut(s) | 203, 395, 565 |
| AcuI | CTGAAG | 2 cut(s) | 399, 471 |
| AcyI | GRCGYC | 1 cut(s) | 109 |
| AflIII | ACRYGT | 1 cut(s) | 405 |
| AgsI | TTSAA | 6 cut(s) | 355, 386, 428, 577, 718, 839 |
| AjnI | CCWGG | 1 cut(s) | 846 |
| AluBI | AGCT | 5 cut(s) | 433, 770, 820, 863, 869 |
| AluI | AGCT | 5 cut(s) | 433, 770, 820, 863, 869 |
| AlwI | GGATC | 2 cut(s) | 705, 791 |
| Ama87I | CYCGRG | 1 cut(s) | 794 |
| ApeKI | GCWGC | 2 cut(s) | 863, 866 |
| ApoI | RAATTY | 3 cut(s) | 203, 395, 565 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 620, 652 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 174 |
| AspLEI | GCGC | 1 cut(s) | 267 |
| AsuHPI | GGTGA | 2 cut(s) | 55, 107 |
| AvaI | CYCGRG | 1 cut(s) | 794 |
| BbsI | GAAGAC | 3 cut(s) | 35, 635, 672 |
| BbvI | GCAGC | 2 cut(s) | 850, 878 |
| BccI | CCATC | 1 cut(s) | 255 |
| BceAI | ACGGC | 1 cut(s) | 508 |
| BciT130I | CCWGG | 1 cut(s) | 848 |
| BclI | TGATCA | 2 cut(s) | 520, 745 |
| BfmI | CTRYAG | 3 cut(s) | 216, 246, 864 |
| BfoI | RGCGCY | 1 cut(s) | 268 |
| BfuAI | ACCTGC | 1 cut(s) | 505 |
| BglII | AGATCT | 1 cut(s) | 553 |
| BisI | GCNGC | 2 cut(s) | 864, 867 |
| BlsI | GCNGC | 2 cut(s) | 865, 868 |
| Bme1390I | CCNGG | 1 cut(s) | 848 |
| BmeT110I | CYCGRG | 1 cut(s) | 794 |
| BmrFI | CCNGG | 1 cut(s) | 848 |
| BmsI | GCATC | 1 cut(s) | 425 |
| BoxI | GACNNNNGTC | 1 cut(s) | 218 |
| BpiI | GAAGAC | 3 cut(s) | 35, 635, 672 |
| BpmI | CTGGAG | 2 cut(s) | 208, 869 |
| BsaAI | YACGTR | 1 cut(s) | 199 |
| BsaHI | GRCGYC | 1 cut(s) | 109 |
| Bse1I | ACTGG | 1 cut(s) | 731 |
| BseBI | CCWGG | 1 cut(s) | 848 |
| BseGI | GGATG | 3 cut(s) | 266, 321, 547 |
| BseNI | ACTGG | 1 cut(s) | 731 |
| BseXI | GCAGC | 2 cut(s) | 850, 878 |
| BsiHKCI | CYCGRG | 1 cut(s) | 794 |
| BsmI | GAATGC | 1 cut(s) | 601 |
| BsoBI | CYCGRG | 1 cut(s) | 794 |
| Bsp143I | GATC | 6 cut(s) | 363, 520, 553, 697, 745, 783 |
| BspACI | CCGC | 1 cut(s) | 315 |
| BspHI | TCATGA | 1 cut(s) | 391 |
| BspMAI | CTGCAG | 1 cut(s) | 868 |
| BspMI | ACCTGC | 1 cut(s) | 505 |
| BspPI | GGATC | 2 cut(s) | 705, 791 |
| BspQI | GCTCTTC | 3 cut(s) | 126, 423, 618 |
| BsrI | ACTGG | 1 cut(s) | 731 |
| BssMI | GATC | 6 cut(s) | 363, 520, 553, 697, 745, 783 |
| BssNI | GRCGYC | 1 cut(s) | 109 |
| Bst2UI | CCWGG | 1 cut(s) | 848 |
| Bst4CI | ACNGT | 3 cut(s) | 137, 636, 661 |
| Bst6I | CTCTTC | 3 cut(s) | 126, 423, 618 |
| BstACI | GRCGYC | 1 cut(s) | 109 |
| BstBAI | YACGTR | 1 cut(s) | 199 |
| BstC8I | GCNNGC | 3 cut(s) | 609, 712, 822 |
| BstDEI | CTNAG | 3 cut(s) | 285, 434, 648 |
| BstF5I | GGATG | 3 cut(s) | 266, 321, 547 |
| BstH2I | RGCGCY | 1 cut(s) | 268 |
| BstHHI | GCGC | 1 cut(s) | 267 |
| BstKTI | GATC | 6 cut(s) | 366, 523, 556, 700, 748, 786 |
| BstMBI | GATC | 6 cut(s) | 363, 520, 553, 697, 745, 783 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 872 |
| BstNI | CCWGG | 1 cut(s) | 848 |
| BstNSI | RCATGY | 2 cut(s) | 607, 611 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 218 |
| BstSCI | CCNGG | 1 cut(s) | 846 |
| BstSFI | CTRYAG | 3 cut(s) | 216, 246, 864 |
| BstV1I | GCAGC | 2 cut(s) | 850, 878 |
| BstV2I | GAAGAC | 3 cut(s) | 35, 635, 672 |
| BstX2I | RGATCY | 2 cut(s) | 553, 697 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 186 |
| BstYI | RGATCY | 2 cut(s) | 553, 697 |
| BtsCI | GGATG | 3 cut(s) | 266, 321, 547 |
| BtsI | GCAGTG | 1 cut(s) | 831 |
| BtsIMutI | CAGTG | 3 cut(s) | 632, 666, 831 |
| BveI | ACCTGC | 1 cut(s) | 505 |
| Cac8I | GCNNGC | 3 cut(s) | 609, 712, 822 |
| CciI | TCATGA | 1 cut(s) | 391 |
| CfoI | GCGC | 1 cut(s) | 267 |
| CseI | GACGC | 2 cut(s) | 98, 722 |
| CviAII | CATG | 7 cut(s) | 180, 211, 307, 392, 604, 608, 670 |
| DdeI | CTNAG | 3 cut(s) | 285, 434, 648 |
| DpnI | GATC | 6 cut(s) | 365, 522, 555, 699, 747, 785 |
| DpnII | GATC | 6 cut(s) | 363, 520, 553, 697, 745, 783 |
| DraI | TTTAAA | 1 cut(s) | 301 |
| Eam1104I | CTCTTC | 3 cut(s) | 126, 423, 618 |
| EarI | CTCTTC | 3 cut(s) | 126, 423, 618 |
| Eco57I | CTGAAG | 2 cut(s) | 399, 471 |
| Eco88I | CYCGRG | 1 cut(s) | 794 |
| EcoRII | CCWGG | 1 cut(s) | 846 |
| EcoT22I | ATGCAT | 2 cut(s) | 418, 609 |
| FaeI | CATG | 7 cut(s) | 183, 214, 310, 395, 607, 611, 673 |
| FatI | CATG | 7 cut(s) | 179, 210, 306, 391, 603, 607, 669 |
| FauI | CCCGC | 1 cut(s) | 322 |
| FbaI | TGATCA | 2 cut(s) | 520, 745 |
| Fnu4HI | GCNGC | 2 cut(s) | 864, 867 |
| FokI | GGATG | 3 cut(s) | 273, 308, 534 |
| Fsp4HI | GCNGC | 2 cut(s) | 864, 867 |
| GlaI | GCGC | 1 cut(s) | 266 |
| GluI | GCNGC | 2 cut(s) | 864, 867 |
| GsuI | CTGGAG | 2 cut(s) | 208, 869 |
| HaeII | RGCGCY | 1 cut(s) | 268 |
| HgaI | GACGC | 2 cut(s) | 98, 722 |
| HhaI | GCGC | 1 cut(s) | 267 |
| Hin1I | GRCGYC | 1 cut(s) | 109 |
| Hin1II | CATG | 7 cut(s) | 183, 214, 310, 395, 607, 611, 673 |
| Hin6I | GCGC | 1 cut(s) | 265 |
| HinP1I | GCGC | 1 cut(s) | 265 |
| HincII | GTYRAC | 1 cut(s) | 490 |
| HindII | GTYRAC | 1 cut(s) | 490 |
| HinfI | GANTC | 5 cut(s) | 98, 310, 443, 509, 580 |
| HphI | GGTGA | 2 cut(s) | 55, 107 |
| Hpy166II | GTNNAC | 1 cut(s) | 490 |
| Hpy188I | TCNGA | 5 cut(s) | 237, 451, 702, 738, 788 |
| Hpy188III | TCNNGA | 9 cut(s) | 155, 367, 392, 506, 551, 592, 617, 796, 808 |
| Hpy8I | GTNNAC | 1 cut(s) | 490 |
| HpyCH4III | ACNGT | 3 cut(s) | 137, 636, 661 |
| HpyCH4IV | ACGT | 4 cut(s) | 32, 198, 333, 407 |
| HpyCH4V | TGCA | 6 cut(s) | 58, 416, 460, 533, 607, 866 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 872 |
| HpyF3I | CTNAG | 3 cut(s) | 285, 434, 648 |
| HpySE526I | ACGT | 4 cut(s) | 32, 198, 333, 407 |
| Hsp92I | GRCGYC | 1 cut(s) | 109 |
| Hsp92II | CATG | 7 cut(s) | 183, 214, 310, 395, 607, 611, 673 |
| HspAI | GCGC | 1 cut(s) | 265 |
| Ksp22I | TGATCA | 2 cut(s) | 520, 745 |
| Kzo9I | GATC | 6 cut(s) | 363, 520, 553, 697, 745, 783 |
| LguI | GCTCTTC | 3 cut(s) | 126, 423, 618 |
| Lsp1109I | GCAGC | 2 cut(s) | 850, 878 |
| LweI | GCATC | 1 cut(s) | 425 |
| MaeII | ACGT | 4 cut(s) | 32, 198, 333, 407 |
| MaeIII | GTNAC | 4 cut(s) | 95, 137, 475, 826 |
| MalI | GATC | 6 cut(s) | 365, 522, 555, 699, 747, 785 |
| MboI | GATC | 6 cut(s) | 363, 520, 553, 697, 745, 783 |
| MflI | RGATCY | 2 cut(s) | 553, 697 |
| MluCI | AATT | 6 cut(s) | 90, 174, 203, 289, 395, 565 |
| MlyI | GAGTC | 1 cut(s) | 92 |
| MnlI | CCTC | 1 cut(s) | 457 |
| Mph1103I | ATGCAT | 2 cut(s) | 418, 609 |
| MroXI | GAANNNNTTC | 1 cut(s) | 174 |
| MseI | TTAA | 6 cut(s) | 21, 162, 300, 327, 410, 705 |
| MspR9I | CCNGG | 1 cut(s) | 848 |
| Mva1269I | GAATGC | 1 cut(s) | 601 |
| MvaI | CCWGG | 1 cut(s) | 848 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 872 |
| NdeII | GATC | 6 cut(s) | 363, 520, 553, 697, 745, 783 |
| NlaIII | CATG | 7 cut(s) | 183, 214, 310, 395, 607, 611, 673 |
| NmuCI | GTSAC | 2 cut(s) | 95, 826 |
| NsiI | ATGCAT | 2 cut(s) | 418, 609 |
| NspI | RCATGY | 2 cut(s) | 607, 611 |
| PaeI | GCATGC | 1 cut(s) | 611 |
| PaeR7I | CTCGAG | 1 cut(s) | 794 |
| PagI | TCATGA | 1 cut(s) | 391 |
| PciSI | GCTCTTC | 3 cut(s) | 126, 423, 618 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 792 |
| PctI | GAATGC | 1 cut(s) | 601 |
| PdmI | GAANNNNTTC | 1 cut(s) | 174 |
| PfeI | GAWTC | 4 cut(s) | 310, 443, 509, 580 |
| PflFI | GACNNNGTC | 1 cut(s) | 634 |
| PkrI | GCNGC | 2 cut(s) | 865, 868 |
| PleI | GAGTC | 1 cut(s) | 92 |
| PpsI | GAGTC | 1 cut(s) | 92 |
| Ppu21I | YACGTR | 1 cut(s) | 199 |
| PshAI | GACNNNNGTC | 1 cut(s) | 218 |
| Psp6I | CCWGG | 1 cut(s) | 846 |
| PspGI | CCWGG | 1 cut(s) | 846 |
| PstI | CTGCAG | 1 cut(s) | 868 |
| PsuI | RGATCY | 2 cut(s) | 553, 697 |
| PsyI | GACNNNGTC | 1 cut(s) | 634 |
| SapI | GCTCTTC | 3 cut(s) | 126, 423, 618 |
| SaqAI | TTAA | 6 cut(s) | 21, 162, 300, 327, 410, 705 |
| SatI | GCNGC | 2 cut(s) | 864, 867 |
| Sau3AI | GATC | 6 cut(s) | 363, 520, 553, 697, 745, 783 |
| SchI | GAGTC | 1 cut(s) | 92 |
| ScrFI | CCNGG | 1 cut(s) | 848 |
| SfaNI | GCATC | 1 cut(s) | 425 |
| SfcI | CTRYAG | 3 cut(s) | 216, 246, 864 |
| Sfr274I | CTCGAG | 1 cut(s) | 794 |
| SlaI | CTCGAG | 1 cut(s) | 794 |
| SmlI | CTYRAG | 1 cut(s) | 794 |
| SmoI | CTYRAG | 1 cut(s) | 794 |
| SphI | GCATGC | 1 cut(s) | 611 |
| Sse9I | AATT | 6 cut(s) | 90, 174, 203, 289, 395, 565 |
| SsiI | CCGC | 1 cut(s) | 315 |
| StyD4I | CCNGG | 1 cut(s) | 846 |
| TaaI | ACNGT | 3 cut(s) | 137, 636, 661 |
| TaiI | ACGT | 4 cut(s) | 35, 201, 336, 410 |
| TaqI | TCGA | 4 cut(s) | 156, 483, 563, 795 |
| TasI | AATT | 6 cut(s) | 90, 174, 203, 289, 395, 565 |
| TfiI | GAWTC | 4 cut(s) | 310, 443, 509, 580 |
| Tru1I | TTAA | 6 cut(s) | 21, 162, 300, 327, 410, 705 |
| Tru9I | TTAA | 6 cut(s) | 21, 162, 300, 327, 410, 705 |
| TscAI | CASTG | 3 cut(s) | 639, 666, 831 |
| TseFI | GTSAC | 2 cut(s) | 95, 826 |
| TseI | GCWGC | 2 cut(s) | 863, 866 |
| Tsp45I | GTSAC | 2 cut(s) | 95, 826 |
| TspDTI | ATGAA | 5 cut(s) | 144, 380, 408, 686, 867 |
| TspGWI | ACGGA | 2 cut(s) | 710, 796 |
| TspRI | CASTG | 3 cut(s) | 639, 666, 831 |
| Tth111I | GACNNNGTC | 1 cut(s) | 634 |
| XapI | RAATTY | 3 cut(s) | 203, 395, 565 |
| XceI | RCATGY | 2 cut(s) | 607, 611 |
| XhoI | CTCGAG | 1 cut(s) | 794 |
| XmnI | GAANNNNTTC | 1 cut(s) | 174 |
| Zsp2I | ATGCAT | 2 cut(s) | 418, 609 |