Plant mobile domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 48 - 272 | 3.7e-11 | Plant mobile domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 537 |
| AciI | CCGC | 2 cut(s) | 95, 280 |
| AclWI | GGATC | 1 cut(s) | 414 |
| AcsI | RAATTY | 4 cut(s) | 80, 181, 328, 514 |
| AcuI | CTGAAG | 2 cut(s) | 288, 361 |
| AfaI | GTAC | 1 cut(s) | 488 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 302, 402, 737 |
| AleI | CACNNNNGTG | 1 cut(s) | 764 |
| AluBI | AGCT | 3 cut(s) | 112, 551, 632 |
| AluI | AGCT | 3 cut(s) | 112, 551, 632 |
| Alw21I | GWGCWC | 2 cut(s) | 38, 136 |
| Alw44I | GTGCAC | 1 cut(s) | 34 |
| AlwI | GGATC | 1 cut(s) | 414 |
| ApaLI | GTGCAC | 1 cut(s) | 34 |
| ApeKI | GCWGC | 1 cut(s) | 467 |
| ApoI | RAATTY | 4 cut(s) | 80, 181, 328, 514 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 621, 653 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 230, 609 |
| AspS9I | GGNCC | 1 cut(s) | 775 |
| AsuHPI | GGTGA | 1 cut(s) | 65 |
| AvaII | GGWCC | 1 cut(s) | 775 |
| BaeGI | GKGCMC | 1 cut(s) | 38 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 98, 130 |
| Bbv12I | GWGCWC | 2 cut(s) | 38, 136 |
| BbvI | GCAGC | 1 cut(s) | 479 |
| BccI | CCATC | 2 cut(s) | 765, 824 |
| BceAI | ACGGC | 1 cut(s) | 402 |
| BclI | TGATCA | 1 cut(s) | 723 |
| BfmI | CTRYAG | 1 cut(s) | 762 |
| BfuAI | ACCTGC | 1 cut(s) | 537 |
| BisI | GCNGC | 2 cut(s) | 95, 468 |
| BlsI | GCNGC | 2 cut(s) | 96, 469 |
| Bme18I | GGWCC | 1 cut(s) | 775 |
| BmgT120I | GGNCC | 1 cut(s) | 775 |
| BmiI | GGNNCC | 1 cut(s) | 776 |
| BmrI | ACTGGG | 1 cut(s) | 19 |
| BmsI | GCATC | 3 cut(s) | 454, 668, 690 |
| BmuI | ACTGGG | 1 cut(s) | 19 |
| BpuEI | CTTGAG | 1 cut(s) | 618 |
| BsaJI | CCNNGG | 1 cut(s) | 533 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 302, 402, 737 |
| Bse1I | ACTGG | 1 cut(s) | 25 |
| Bse3DI | GCAATG | 1 cut(s) | 842 |
| BseDI | CCNNGG | 1 cut(s) | 533 |
| BseGI | GGATG | 2 cut(s) | 193, 683 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 302, 402, 737 |
| BseMI | GCAATG | 1 cut(s) | 842 |
| BseMII | CTCAG | 2 cut(s) | 57, 636 |
| BseNI | ACTGG | 1 cut(s) | 25 |
| BseRI | GAGGAG | 2 cut(s) | 662, 861 |
| BseSI | GKGCMC | 1 cut(s) | 38 |
| BseXI | GCAGC | 1 cut(s) | 479 |
| Bsh1285I | CGRYCG | 1 cut(s) | 712 |
| BsiEI | CGRYCG | 1 cut(s) | 712 |
| BsiHKAI | GWGCWC | 2 cut(s) | 38, 136 |
| BslFI | GGGAC | 2 cut(s) | 304, 788 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 302, 402, 737 |
| BsmFI | GGGAC | 2 cut(s) | 304, 788 |
| Bsp1286I | GDGCHC | 2 cut(s) | 38, 136 |
| Bsp143I | GATC | 3 cut(s) | 406, 709, 723 |
| Bsp19I | CCATGG | 1 cut(s) | 533 |
| BspACI | CCGC | 2 cut(s) | 95, 280 |
| BspCNI | CTCAG | 2 cut(s) | 58, 637 |
| BspHI | TCATGA | 1 cut(s) | 684 |
| BspLI | GGNNCC | 1 cut(s) | 776 |
| BspMAI | CTGCAG | 1 cut(s) | 766 |
| BspMI | ACCTGC | 1 cut(s) | 537 |
| BspPI | GGATC | 1 cut(s) | 414 |
| BsrDI | GCAATG | 1 cut(s) | 842 |
| BsrI | ACTGG | 1 cut(s) | 25 |
| BssECI | CCNNGG | 1 cut(s) | 533 |
| BssMI | GATC | 3 cut(s) | 406, 709, 723 |
| BssT1I | CCWWGG | 1 cut(s) | 533 |
| Bst4CI | ACNGT | 2 cut(s) | 14, 169 |
| BstC8I | GCNNGC | 1 cut(s) | 510 |
| BstDEI | CTNAG | 2 cut(s) | 66, 645 |
| BstDSI | CCRYGG | 1 cut(s) | 533 |
| BstF5I | GGATG | 2 cut(s) | 193, 683 |
| BstKTI | GATC | 3 cut(s) | 409, 712, 726 |
| BstMBI | GATC | 3 cut(s) | 406, 709, 723 |
| BstMCI | CGRYCG | 1 cut(s) | 712 |
| BstNSI | RCATGY | 1 cut(s) | 474 |
| BstSFI | CTRYAG | 1 cut(s) | 762 |
| BstSLI | GKGCMC | 1 cut(s) | 38 |
| BstV1I | GCAGC | 1 cut(s) | 479 |
| BstX2I | RGATCY | 1 cut(s) | 406 |
| BstYI | RGATCY | 1 cut(s) | 406 |
| BtgI | CCRYGG | 1 cut(s) | 533 |
| BtsCI | GGATG | 2 cut(s) | 193, 683 |
| BtsI | GCAGTG | 2 cut(s) | 759, 771 |
| BtsIMutI | CAGTG | 5 cut(s) | 19, 134, 385, 759, 771 |
| BveI | ACCTGC | 1 cut(s) | 537 |
| Cac8I | GCNNGC | 1 cut(s) | 510 |
| CciI | TCATGA | 1 cut(s) | 684 |
| Cfr13I | GGNCC | 1 cut(s) | 775 |
| Csp6I | GTAC | 1 cut(s) | 487 |
| CviAII | CATG | 3 cut(s) | 471, 534, 685 |
| CviJI | RGCY | 5 cut(s) | 65, 94, 112, 551, 632 |
| CviKI_1 | RGCY | 5 cut(s) | 65, 94, 112, 551, 632 |
| CviQI | GTAC | 1 cut(s) | 487 |
| DdeI | CTNAG | 2 cut(s) | 66, 645 |
| DpnI | GATC | 3 cut(s) | 408, 711, 725 |
| DpnII | GATC | 3 cut(s) | 406, 709, 723 |
| Eco130I | CCWWGG | 1 cut(s) | 533 |
| Eco47I | GGWCC | 1 cut(s) | 775 |
| Eco57I | CTGAAG | 2 cut(s) | 288, 361 |
| EcoO109I | RGGNCCY | 1 cut(s) | 775 |
| EcoT14I | CCWWGG | 1 cut(s) | 533 |
| EcoT22I | ATGCAT | 1 cut(s) | 683 |
| ErhI | CCWWGG | 1 cut(s) | 533 |
| FaeI | CATG | 3 cut(s) | 474, 537, 688 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 594, 626 |
| FaqI | GGGAC | 2 cut(s) | 304, 788 |
| FatI | CATG | 3 cut(s) | 470, 533, 684 |
| FbaI | TGATCA | 1 cut(s) | 723 |
| Fnu4HI | GCNGC | 2 cut(s) | 95, 468 |
| FokI | GGATG | 2 cut(s) | 200, 690 |
| Fsp4HI | GCNGC | 2 cut(s) | 95, 468 |
| GluI | GCNGC | 2 cut(s) | 95, 468 |
| Hin1II | CATG | 3 cut(s) | 474, 537, 688 |
| HindIII | AAGCTT | 2 cut(s) | 110, 549 |
| HinfI | GANTC | 3 cut(s) | 621, 688, 855 |
| HphI | GGTGA | 1 cut(s) | 65 |
| Hpy166II | GTNNAC | 2 cut(s) | 36, 755 |
| Hpy188III | TCNNGA | 8 cut(s) | 103, 152, 333, 357, 519, 685, 827, 870 |
| Hpy8I | GTNNAC | 2 cut(s) | 36, 755 |
| HpyAV | CCTTC | 3 cut(s) | 149, 620, 731 |
| HpyCH4III | ACNGT | 2 cut(s) | 14, 169 |
| HpyCH4IV | ACGT | 1 cut(s) | 543 |
| HpyF3I | CTNAG | 2 cut(s) | 66, 645 |
| HpySE526I | ACGT | 1 cut(s) | 543 |
| Hsp92II | CATG | 3 cut(s) | 474, 537, 688 |
| Ksp22I | TGATCA | 1 cut(s) | 723 |
| Kzo9I | GATC | 3 cut(s) | 406, 709, 723 |
| LmnI | GCTCC | 1 cut(s) | 131 |
| LpnPI | CCDG | 4 cut(s) | 38, 333, 504, 542 |
| Lsp1109I | GCAGC | 1 cut(s) | 479 |
| LweI | GCATC | 3 cut(s) | 454, 668, 690 |
| MaeII | ACGT | 1 cut(s) | 543 |
| MaeIII | GTNAC | 1 cut(s) | 539 |
| MalI | GATC | 3 cut(s) | 408, 711, 725 |
| MboI | GATC | 3 cut(s) | 406, 709, 723 |
| MboII | GAAGA | 6 cut(s) | 85, 118, 281, 367, 449, 864 |
| MfeI | CAATTG | 1 cut(s) | 420 |
| MflI | RGATCY | 1 cut(s) | 406 |
| MhlI | GDGCHC | 2 cut(s) | 38, 136 |
| MluCI | AATT | 6 cut(s) | 80, 181, 328, 420, 514, 583 |
| MlyI | GAGTC | 1 cut(s) | 682 |
| MmeI | TCCRAC | 1 cut(s) | 25 |
| Mph1103I | ATGCAT | 1 cut(s) | 683 |
| MroXI | GAANNNNTTC | 2 cut(s) | 230, 609 |
| MseI | TTAA | 2 cut(s) | 362, 476 |
| MslI | CAYNNNNRTG | 1 cut(s) | 764 |
| MunI | CAATTG | 1 cut(s) | 420 |
| NcoI | CCATGG | 1 cut(s) | 533 |
| NdeII | GATC | 3 cut(s) | 406, 709, 723 |
| NlaIII | CATG | 3 cut(s) | 474, 537, 688 |
| NlaIV | GGNNCC | 1 cut(s) | 776 |
| NsiI | ATGCAT | 1 cut(s) | 683 |
| NspI | RCATGY | 1 cut(s) | 474 |
| OliI | CACNNNNGTG | 1 cut(s) | 764 |
| PagI | TCATGA | 1 cut(s) | 684 |
| PdmI | GAANNNNTTC | 2 cut(s) | 230, 609 |
| PfeI | GAWTC | 2 cut(s) | 621, 855 |
| PkrI | GCNGC | 2 cut(s) | 96, 469 |
| Ple19I | CGATCG | 1 cut(s) | 712 |
| PleI | GAGTC | 1 cut(s) | 682 |
| PpsI | GAGTC | 1 cut(s) | 682 |
| PpuMI | RGGWCCY | 1 cut(s) | 775 |
| Psp5II | RGGWCCY | 1 cut(s) | 775 |
| PspN4I | GGNNCC | 1 cut(s) | 776 |
| PspPI | GGNCC | 1 cut(s) | 775 |
| PspPPI | RGGWCCY | 1 cut(s) | 775 |
| PstI | CTGCAG | 1 cut(s) | 766 |
| PsuI | RGATCY | 1 cut(s) | 406 |
| PvuI | CGATCG | 1 cut(s) | 712 |
| RsaI | GTAC | 1 cut(s) | 488 |
| RsaNI | GTAC | 1 cut(s) | 487 |
| RseI | CAYNNNNRTG | 1 cut(s) | 764 |
| SaqAI | TTAA | 2 cut(s) | 362, 476 |
| SatI | GCNGC | 2 cut(s) | 95, 468 |
| Sau3AI | GATC | 3 cut(s) | 406, 709, 723 |
| Sau96I | GGNCC | 1 cut(s) | 775 |
| SchI | GAGTC | 1 cut(s) | 682 |
| SduI | GDGCHC | 2 cut(s) | 38, 136 |
| SetI | ASST | 8 cut(s) | 114, 531, 546, 553, 612, 634, 780, 865 |
| SfaNI | GCATC | 3 cut(s) | 454, 668, 690 |
| SfcI | CTRYAG | 1 cut(s) | 762 |
| SinI | GGWCC | 1 cut(s) | 775 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 764 |
| SmlI | CTYRAG | 1 cut(s) | 633 |
| SmoI | CTYRAG | 1 cut(s) | 633 |
| Sse9I | AATT | 6 cut(s) | 80, 181, 328, 420, 514, 583 |
| SsiI | CCGC | 2 cut(s) | 95, 280 |
| SspI | AATATT | 1 cut(s) | 818 |
| StyI | CCWWGG | 1 cut(s) | 533 |
| TaaI | ACNGT | 2 cut(s) | 14, 169 |
| TaiI | ACGT | 1 cut(s) | 546 |
| TaqI | TCGA | 2 cut(s) | 358, 712 |
| TasI | AATT | 6 cut(s) | 80, 181, 328, 420, 514, 583 |
| TatI | WGTACW | 1 cut(s) | 486 |
| TauI | GCSGC | 1 cut(s) | 97 |
| TfiI | GAWTC | 2 cut(s) | 621, 855 |
| Tru1I | TTAA | 2 cut(s) | 362, 476 |
| Tru9I | TTAA | 2 cut(s) | 362, 476 |
| TscAI | CASTG | 5 cut(s) | 19, 141, 385, 766, 771 |
| TseI | GCWGC | 1 cut(s) | 467 |
| TspGWI | ACGGA | 1 cut(s) | 633 |
| TspRI | CASTG | 5 cut(s) | 19, 141, 385, 766, 771 |
| VneI | GTGCAC | 1 cut(s) | 34 |
| VpaK11BI | GGWCC | 1 cut(s) | 775 |
| XapI | RAATTY | 4 cut(s) | 80, 181, 328, 514 |
| XceI | RCATGY | 1 cut(s) | 474 |
| XmnI | GAANNNNTTC | 2 cut(s) | 230, 609 |
| Zsp2I | ATGCAT | 1 cut(s) | 683 |