FvH4_3g23482

ubiquitinyl hydrolase activity

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
16547105 .. 16550709
3605 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g23482.t2

Sequence Viewer

Length: 1293 bp
ATGGGAGAAAGGAAAGGTAAAGGTAAGAAAGACAAGGAGGAGTTGTTATTGTCCTGGAGCTTCCCTCCCCAGGGCTGGTACAAGCTCAACGTAGATGGGAGTCGGCGACATAAACCTCAGTGCATTGGAGGAGGTGGTGTGATTCGAAACGAAAACGGAGAATGGGTTGCAGGATTTGTAGCCAATTTCGGAACAGGGAAAGCTATTGAGGCAGAGCTCAAGGCCCTGCACACAGGCTTGGAACTTGCTTTGAAATCTCGGGTGGAATGTCTTGAGGTAGAAACTGACTCGCAGCTGGCTGTAAATCTTTTATCGAATGTAGGCACATTGTACCAAGAACACCATCTGATTGAACTGATTAAAAGCTGCAATGCTCTTTTAAACCAAAACTCGAGATGGACAATAAGTGGTGTGTATAGACAGCAGAACTGTGTGGCTGATTGTCTAGCCGGATTGGGCCATACTTTGGAGGAAGGGGTTACGACTTATTATGATTCACCCCCTACTGCCTGTGAACCGATATTACTTGAGGATCAGTCTATGGTTGCTCGAACCAGGTTGATTTCTCTTCGTAAATTGATGAATCAGAATGCTGGTAATATATTGATTCCAAGGTCGTATAGGTTTAAGAATCATTATGTTCTTAGCATGAAGAATGCGAAAGTTGAGGAAGGGGATGATCTTGAACCTGTGACATTCACATGGAAAATTGACAACTTCTCTAAGATGGATACCGCCTCCAAGCATTACTCTGATAATTTTGTCATTGGCAATTCTAAATGGCGGATCCTTCTGTATCTGAAGGGGAATGCTGTTGATTACTTGTCACCATATTTGGATGTCCCGGATGTTTCAAAATTGCCTCAGGGGTGGTCTAGATGTGCACATTTCAGCTTGACAGTGGTTAATCAACTTCAACCCAGCAAATCAATAACAAAGGAAGCTGTACATGTATTCAGTGCTTGTGACAGTGACTGTGGCTTCAAATTTTTAGTTCCTCTCAGTTGGCTTTCTGACCATGGTAATGAGTATCTTGTAAATGATGTATGTATTCTTGAAGCCAAGGTCGAACTTCATAAGGTGAAGGCTAAGAATTTAAAAGATAAAAGAACTGTTGGTTCTGCACCTGTGGAGCAGGGCCCTGATATCGATTCTGTAAAGGACCCAGACAGATTAACTACATGCAAGGAACTGAATTGCGAACAGATGGCTGCCGGTCATGATGCACCAAGTTTTGAAAAAAATAGCACCGAGCCTACTAGCCCTTCATCATCAGTTGAGGATGCACATTAG

Protein Analysis

431

Amino Acids

47.86

Weight (kDa)

6.14

Isoelectric Point (pI)

41.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 30 - 150 1.2e-19 Reverse transcriptase-like
MATH_2 PF22486 232 - 314 6.9e-18 MATH domain
MATH PF00917 237 - 314 3.2e-07 MATH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000025)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31370 AT1G31380 AT1G31390 AT1G31400 AT2G01790 AT2G05400 AT2G05400 AT2G05400 AT2G05410 AT2G05410 AT2G05420 AT2G05430 AT2G42455 AT2G42460 AT2G42465 AT2G42470 AT2G42475 AT2G42480 AT3G27040 AT3G29580 AT3G44790 AT3G44800 AT3G44805 AT3G58200 AT3G58210 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58230 AT3G58240 AT3G58250 AT3G58260 AT3G58270 AT3G58270 AT3G58270 AT3G58280 AT3G58290 AT3G58290 AT3G58290 AT3G58300 AT3G58320 AT3G58330 AT3G58340 AT3G58340 AT3G58350 AT3G58350 AT3G58360 AT3G58370 AT3G58380 AT3G58400 AT3G58410 AT3G58410 AT3G58430 AT3G58430 AT3G58440 AT5G03550
fragaria_vesca FvH4_2g00084 FvH4_2g15701 FvH4_2g24334 FvH4_3g23322 FvH4_3g23322 FvH4_3g23322 FvH4_3g23482 FvH4_3g23482 FvH4_3g23482 FvH4_3g23491 FvH4_3g23492 FvH4_3g23510 FvH4_3g23520 FvH4_3g23520 FvH4_3g23520 FvH4_3g23580 FvH4_3g38842 FvH4_4g10396 FvH4_5g29370 FvH4_5g32130 FvH4_7g04570 FvH4_7g04571 FvH4_7g04741 FvH4_7g04741 FvH4_7g04750 FvH4_7g04750 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04770 FvH4_7g04770 FvH4_7g04770
malus_domestica MD00G1065000.v1.1 MD00G1065300.v1.1 MD02G1267400.v1.1 MD02G1267600.v1.1 MD02G1267700.v1.1 MD02G1267800.v1.1 MD02G1268100.v1.1 MD02G1268300.v1.1 MD02G1268400.v1.1 MD02G1268500.v1.1 MD03G1193600.v1.1 MD05G1071400.v1.1 MD07G1051000.v1.1 MD07G1051100.v1.1 MD07G1051200.v1.1 MD07G1051300.v1.1 MD07G1051500.v1.1 MD07G1051700.v1.1 MD07G1051800.v1.1 MD07G1085400.v1.1 MD07G1085500.v1.1 MD11G1177200.v1.1 MD11G1209800.v1.1 MD11G1209900.v1.1 MD11G1210000.v1.1 MD12G1048100.v1.1 MD12G1048600.v1.1 MD14G1046700.v1.1 MD14G1047400.v1.1
prunus_persica Prupe.2G051200_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052700_v2.0.a1 Prupe.2G052800_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G053100_v2.0.a1 Prupe.2G053300_v2.0.a1 Prupe.2G054800_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.4G223300_v2.0.a1 Prupe.4G223300_v2.0.a1
pyrus_communis pycom01g04720 pycom02g22950 pycom02g22960 pycom02g22970 pycom02g22990 pycom02g23000 pycom02g23010 pycom03g14600 pycom03g14610 pycom05g06150 pycom07g03820 pycom07g03830 pycom07g03850 pycom07g03860 pycom07g03880 pycom07g03890 pycom07g03900 pycom07g04000 pycom07g04010 pycom11g18540 pycom11g18560 pycom12g04190 pycom17g19100
rosa_chinensis RchiOBHm_Chr0c19g0500051 RchiOBHm_Chr1g0330011 RchiOBHm_Chr1g0330031 RchiOBHm_Chr1g0330041 RchiOBHm_Chr1g0330121 RchiOBHm_Chr1g0330141 RchiOBHm_Chr1g0330151 RchiOBHm_Chr1g0330181 RchiOBHm_Chr1g0330191 RchiOBHm_Chr1g0330201 RchiOBHm_Chr1g0330211 RchiOBHm_Chr1g0330221 RchiOBHm_Chr1g0367471 RchiOBHm_Chr2g0113311 RchiOBHm_Chr2g0148281 RchiOBHm_Chr4g0400061 RchiOBHm_Chr4g0437571 RchiOBHm_Chr5g0041361 RchiOBHm_Chr5g0041421 RchiOBHm_Chr5g0041481 RchiOBHm_Chr5g0041491 RchiOBHm_Chr5g0041501 RchiOBHm_Chr5g0041511 RchiOBHm_Chr5g0042491 RchiOBHm_Chr5g0042501 RchiOBHm_Chr6g0263551 RchiOBHm_Chr6g0286221 RchiOBHm_Chr7g0228171 RchiOBHm_Chr7g0231391 RchiOBHm_Chr7g0231401
rosa_laevigata RLG00000000870 RLG00000001420 RLG00000001582 RLG00000001602 RLG00000001700 RLG00000002476 RLG00000005787 RLG00000007689 RLG00000008446 RLG00000008811 RLG00000008812 RLG00000009013 RLG00000009942 RLG00000012752 RLG00000013511 RLG00000014053 RLG00000015257 RLG00000015258 RLG00000016149 RLG00000016691 RLG00000018661 RLG00000018662 RLG00000020991 RLG00000020992 RLG00000020993 RLG00000027309 RLG00000028568 RLG00000029119 RLG00000029371 RLG00000029563 RLG00000029818 RLG00000029819 RLG00000029821 RLG00000029822 RLG00000029824 RLG00000029827 RLG00000029828 RLG00000029829 RLG00000029841 RLG00000029843 RLG00000032676 RLG00000033366 RLG00000033367 RLG00000034023 RLG00000034066 RLG00000034072 RLG00000034073 RLG00000034074 RLG00000034130 RLG00000034133 RLG00000035487 RLG00000035488 RLG00000035793
rosa_multiflora Rmu_co8241405.1_g000001 Rmu_co8251033.1_g000001 Rmu_co8297611.1_g000001 Rmu_co8346639.1_g000001 Rmu_co8405917.1_g000001 Rmu_sc0000045.1_g000044 Rmu_sc0000061.1_g000032 Rmu_sc0000068.1_g000021 Rmu_sc0000068.1_g000022 Rmu_sc0000415.1_g000001 Rmu_sc0000499.1_g000003 Rmu_sc0000594.1_g000020 Rmu_sc0000673.1_g000007 Rmu_sc0000908.1_g000004 Rmu_sc0001123.1_g000013 Rmu_sc0001123.1_g000014 Rmu_sc0001167.1_g000026 Rmu_sc0001598.1_g000011 Rmu_sc0001696.1_g000003 Rmu_sc0001696.1_g000011 Rmu_sc0001696.1_g000019 Rmu_sc0001696.1_g000020 Rmu_sc0003007.1_g000016 Rmu_sc0003007.1_g000029 Rmu_sc0003051.1_g000010 Rmu_sc0003396.1_g000029 Rmu_sc0004798.1_g000020 Rmu_sc0005375.1_g000016 Rmu_sc0005375.1_g000017 Rmu_sc0005659.1_g000033 Rmu_sc0005659.1_g000034 Rmu_sc0006311.1_g000011 Rmu_sc0008249.1_g000002 Rmu_sc0008249.1_g000018 Rmu_sc0008600.1_g000014 Rmu_sc0009365.1_g000010 Rmu_sc0009365.1_g000022 Rmu_sc0009365.1_g000025 Rmu_sc0011112.1_g000008 Rmu_sc0011112.1_g000009 Rmu_sc0012031.1_g000020 Rmu_sc0013350.1_g000014 Rmu_sc0020359.1_g000004 Rmu_sc0021997.1_g000003 Rmu_sc0021997.1_g000004 Rmu_sc0023610.1_g000002 Rmu_sc0023611.1_g000001 Rmu_sc0028894.1_g000001 Rmu_sc0031050.1_g000001 Rmu_sc0041109.1_g000001 Rmu_ssc0000087.1_g000050 Rmu_ssc0000087.1_g000051 Rmu_ssc0000087.1_g000052 Rmu_ssc0000295.1_g000058 Rmu_ssc0000343.1_g000031 Rmu_ssc0000423.1_g000015 Rmu_ssc0000470.1_g000005 Rmu_ssc0000470.1_g000006
rosa_roxburghii Rroxscaffold_1G00005900 Rroxscaffold_1G00005910 Rroxscaffold_1G00012600 Rroxscaffold_1G00016860 Rroxscaffold_1G00032110 Rroxscaffold_1G00038140 Rroxscaffold_1G00038200 Rroxscaffold_1G00039020 Rroxscaffold_1G00039030 Rroxscaffold_1G00039080 Rroxscaffold_1G00039090 Rroxscaffold_1G00039270 Rroxscaffold_2G00097120 Rroxscaffold_2G00097130 Rroxscaffold_2G00137700 Rroxscaffold_2G00151740 Rroxscaffold_2G00151750 Rroxscaffold_3G00224160 Rroxscaffold_3G00224170 Rroxscaffold_3G00226080 Rroxscaffold_3G00226090 Rroxscaffold_3G00229350 Rroxscaffold_3G00231340 Rroxscaffold_4G00291390 Rroxscaffold_4G00316220 Rroxscaffold_4G00316230 Rroxscaffold_4G00320040 Rroxscaffold_4G00320050 Rroxscaffold_4G00320120 Rroxscaffold_4G00320140 Rroxscaffold_4G00320180 Rroxscaffold_4G00320270 Rroxscaffold_4G00320280 Rroxscaffold_4G00320290 Rroxscaffold_4G00320430 Rroxscaffold_4G00321910 Rroxscaffold_5G00348730 Rroxscaffold_5G00355020 Rroxscaffold_5G00355080 Rroxscaffold_5G00357490 Rroxscaffold_5G00376500 Rroxscaffold_5G00376510 Rroxscaffold_7G00179590 Rroxscaffold_7G00179600 Rroxscaffold_7G00198610
rosa_rugosa Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0086300 Rorug01G0086500 Rorug01G0087000 Rorug01G0087100 Rorug01G0087600 Rorug01G0087700 Rorug01G0087800 Rorug01G0087800 Rorug01G0302500 Rorug02G0249300 Rorug02G0249300 Rorug02G0249400 Rorug03G0189000 Rorug04G0181800 Rorug04G0283800.1 Rorug04G0283900.1 Rorug05G0043500 Rorug05G0191800 Rorug05G0191900 Rorug05G0192800 Rorug05G0192900 Rorug05G0193000 Rorug05G0201000 Rorug05G0201100 Rorug06G0173900 Rorug06G0173900 Rorug07G0009800 Rorug07G0246300.1 Rorug07G0246400
rosa_samantha Rh1AG103600 Rh1AG104800 Rh1AG105200 Rh1AG105300 Rh1AG105500 Rh1BG082000 Rh1BG082200 Rh1BG082300 Rh1BG082900 Rh1BG083000 Rh1BG083300 Rh1BG083500 Rh1BG083600 Rh1BG083800 Rh1BG083900 Rh1BG084000 Rh1BG084100 Rh1BG084200 Rh1BG092200 Rh1BG275300 Rh1CG098700 Rh1CG098800 Rh1CG100300 Rh1CG100400 Rh1CG100600 Rh1CG100900 Rh1CG101000 Rh1CG101700 Rh1DG066900 Rh1DG067000 Rh1DG106000 Rh1DG107600 Rh1DG107800 Rh1DG108100 Rh1DG108200 Rh1DG108600 Rh1DG108700 Rh1DG108900 Rh1DG109000 Rh1DG109100 Rh1DG109300 Rh1DG109400 Rh1DG109500 Rh1DG109700 Rh1DG109800 Rh1DG173900 Rh2AG270300 Rh2AG398900 Rh2CG245000 Rh2CG260700 Rh2CG278600 Rh2CG342400 Rh2CG385700 Rh3DG197200 Rh3DG197300 Rh4AG015100 Rh4BG347400 Rh4DG360400 Rh5AG278600 Rh5AG278700 Rh5AG286900 Rh5AG287000 Rh5BG282900 Rh5BG283000 Rh5BG283100 Rh5BG291400 Rh5CG314900 Rh5CG315100 Rh5CG315400 Rh5CG315700 Rh5CG315900 Rh5CG316000 Rh5CG323600 Rh5CG323700 Rh5DG291400 Rh5DG292300 Rh5DG292500 Rh5DG292700 Rh5DG292800 Rh5DG292900 Rh5DG301100 Rh5DG301200 Rh5DG301400 Rh5DG350900 Rh6BG407700 Rh6CG294900 Rh6DG286900 Rh7AG400400 Rh7AG420600 Rh7BG381700 Rh7BG395000 Rh7CG418600 Rh7CG440700 Rh7DG396500 Rh7DG413200
rosa_wichuraiana Rw1G003300 Rw1G008240 Rw1G008250 Rw1G008270 Rw1G008330 Rw1G008340 Rw1G008350 Rw1G008360 Rw1G008370 Rw1G008810 Rw1G021140 Rw3G020650 Rw5G026150 Rw5G026200 Rw5G026240 Rw5G026250 Rw5G026650 Rw5G030820 Rw7G006630 Rw7G030060 Rw7G034700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 466
AciI CCGC 2 cut(s) 735, 784
AclWI GGATC 3 cut(s) 540, 781, 794
AcsI RAATTY 2 cut(s) 986, 1093
AcuI CTGAAG 1 cut(s) 821
AfaI GTAC 3 cut(s) 80, 332, 948
AfiI CCNNNNNNNGG 4 cut(s) 70, 71, 75, 466
AflIII ACRYGT 1 cut(s) 949
AgsI TTSAA 8 cut(s) 253, 353, 686, 855, 917, 985, 1058, 1238
AjnI CCWGG 3 cut(s) 53, 69, 554
AluBI AGCT 8 cut(s) 60, 85, 203, 217, 295, 366, 894, 944
AluI AGCT 8 cut(s) 60, 85, 203, 217, 295, 366, 894, 944
Alw21I GWGCWC 2 cut(s) 219, 886
Alw44I GTGCAC 1 cut(s) 882
AlwI GGATC 3 cut(s) 540, 781, 794
AlwNI CAGNNNCTG 1 cut(s) 975
Ama87I CYCGRG 2 cut(s) 258, 391
AoxI GGCC 3 cut(s) 222, 457, 1138
ApaI GGGCCC 1 cut(s) 1142
ApaLI GTGCAC 1 cut(s) 882
ApeKI GCWGC 3 cut(s) 292, 366, 1211
ApoI RAATTY 2 cut(s) 986, 1093
AspS9I GGNCC 5 cut(s) 223, 457, 1138, 1139, 1162
AsuC2I CCSGG 1 cut(s) 845
AsuHPI GGTGA 3 cut(s) 489, 819, 1093
AsuII TTCGAA 1 cut(s) 145
AvaI CYCGRG 2 cut(s) 258, 391
AvaII GGWCC 1 cut(s) 1162
AxyI CCTNAGG 1 cut(s) 864
BaeGI GKGCMC 2 cut(s) 886, 1142
BamHI GGATCC 1 cut(s) 786
BanII GRGCYC 2 cut(s) 219, 1142
Bbv12I GWGCWC 2 cut(s) 219, 886
BbvI GCAGC 3 cut(s) 304, 353, 1198
BccI CCATC 5 cut(s) 89, 351, 390, 721, 1201
BciT130I CCWGG 3 cut(s) 55, 71, 556
BciVI GTATCC 1 cut(s) 724
BcnI CCSGG 1 cut(s) 845
BfaI CTAG 3 cut(s) 446, 876, 1260
BfuI GTATCC 1 cut(s) 724
BisI GCNGC 3 cut(s) 293, 367, 1212
BlsI GCNGC 3 cut(s) 294, 368, 1213
Bme1390I CCNGG 4 cut(s) 55, 71, 556, 845
Bme18I GGWCC 1 cut(s) 1162
BmeT110I CYCGRG 2 cut(s) 258, 391
BmgT120I GGNCC 5 cut(s) 223, 457, 1138, 1139, 1162
BmiI GGNNCC 3 cut(s) 788, 1140, 1164
BmrFI CCNGG 4 cut(s) 55, 71, 556, 845
BmsI GCATC 2 cut(s) 1213, 1273
BplI GAGNNNNNCTC 2 cut(s) 49, 81
BpmI CTGGAG 1 cut(s) 76
Bpu14I TTCGAA 1 cut(s) 145
BpuEI CTTGAG 3 cut(s) 203, 293, 548
BpuMI CCSGG 1 cut(s) 845
Bsa29I ATCGAT 1 cut(s) 1149
BsaJI CCNNGG 5 cut(s) 69, 70, 611, 1018, 1062
BsaXI ACNNNNNCTCC 6 cut(s) 29, 59, 123, 150, 153, 180
Bsc4I CCNNNNNNNGG 4 cut(s) 70, 71, 75, 466
Bse118I RCCGGY 1 cut(s) 1214
Bse21I CCTNAGG 1 cut(s) 864
Bse3DI GCAATG 1 cut(s) 376
BseBI CCWGG 3 cut(s) 55, 71, 556
BseCI ATCGAT 1 cut(s) 1149
BseDI CCNNGG 5 cut(s) 69, 70, 611, 1018, 1062
BseGI GGATG 4 cut(s) 682, 844, 853, 1288
BseLI CCNNNNNNNGG 4 cut(s) 70, 71, 75, 466
BseMI GCAATG 1 cut(s) 376
BseMII CTCAG 3 cut(s) 131, 878, 1015
BseRI GAGGAG 2 cut(s) 53, 144
BseSI GKGCMC 2 cut(s) 886, 1142
BseXI GCAGC 3 cut(s) 304, 353, 1198
BseYI CCCAGC 1 cut(s) 920
BsgI GTGCAG 2 cut(s) 212, 1107
BshFI GGCC 3 cut(s) 224, 459, 1140
BshVI ATCGAT 1 cut(s) 1149
BsiHKAI GWGCWC 2 cut(s) 219, 886
BsiHKCI CYCGRG 2 cut(s) 258, 391
BsiSI CCGG 3 cut(s) 450, 845, 1215
BslFI GGGAC 1 cut(s) 827
BslI CCNNNNNNNGG 4 cut(s) 70, 71, 75, 466
BsmFI GGGAC 1 cut(s) 827
BsmI GAATGC 3 cut(s) 595, 661, 814
BsnI GGCC 3 cut(s) 224, 459, 1140
BsoBI CYCGRG 2 cut(s) 258, 391
Bsp119I TTCGAA 1 cut(s) 145
Bsp120I GGGCCC 1 cut(s) 1138
Bsp1286I GDGCHC 3 cut(s) 219, 886, 1142
Bsp1407I TGTACA 1 cut(s) 946
Bsp143I GATC 3 cut(s) 532, 679, 786
Bsp19I CCATGG 1 cut(s) 1018
BspACI CCGC 2 cut(s) 735, 784
BspANI GGCC 3 cut(s) 224, 459, 1140
BspCNI CTCAG 3 cut(s) 130, 877, 1014
BspDI ATCGAT 1 cut(s) 1149
BspHI TCATGA 1 cut(s) 1219
BspLI GGNNCC 3 cut(s) 788, 1140, 1164
BspPI GGATC 3 cut(s) 540, 781, 794
BspT104I TTCGAA 1 cut(s) 145
BsrDI GCAATG 1 cut(s) 376
BsrFI RCCGGY 1 cut(s) 1214
BsrGI TGTACA 1 cut(s) 946
BssAI RCCGGY 1 cut(s) 1214
BssECI CCNNGG 5 cut(s) 69, 70, 611, 1018, 1062
BssMI GATC 3 cut(s) 532, 679, 786
BssT1I CCWWGG 3 cut(s) 611, 1018, 1062
Bst2UI CCWGG 3 cut(s) 55, 71, 556
Bst4CI ACNGT 5 cut(s) 431, 901, 971, 977, 1114
Bst6I CTCTTC 1 cut(s) 573
BstAUI TGTACA 1 cut(s) 946
BstBI TTCGAA 1 cut(s) 145
BstC8I GCNNGC 1 cut(s) 297
BstDEI CTNAG 6 cut(s) 117, 644, 723, 864, 1001, 1089
BstDSI CCRYGG 1 cut(s) 1018
BstF5I GGATG 4 cut(s) 682, 844, 853, 1288
BstKTI GATC 3 cut(s) 535, 682, 789
BstMBI GATC 3 cut(s) 532, 679, 786
BstMWI GCNNNNNNNGC 1 cut(s) 209
BstNI CCWGG 3 cut(s) 55, 71, 556
BstNSI RCATGY 2 cut(s) 953, 1185
BstSCI CCNGG 4 cut(s) 53, 69, 554, 843
BstSLI GKGCMC 2 cut(s) 886, 1142
BstV1I GCAGC 3 cut(s) 304, 353, 1198
BstX2I RGATCY 1 cut(s) 786
BstYI RGATCY 1 cut(s) 786
Bsu15I ATCGAT 1 cut(s) 1149
Bsu36I CCTNAGG 1 cut(s) 864
BsuI GTATCC 1 cut(s) 724
BsuRI GGCC 3 cut(s) 224, 459, 1140
BsuTUI ATCGAT 1 cut(s) 1149
BtgI CCRYGG 1 cut(s) 1018
BtsCI GGATG 4 cut(s) 682, 844, 853, 1288
BtsIMutI CAGTG 4 cut(s) 125, 906, 964, 976
Cac8I GCNNGC 1 cut(s) 297
CaiI CAGNNNCTG 1 cut(s) 975
CciI TCATGA 1 cut(s) 1219
Cfr10I RCCGGY 1 cut(s) 1214
Cfr13I GGNCC 5 cut(s) 223, 457, 1138, 1139, 1162
ClaI ATCGAT 1 cut(s) 1149
CsiI ACCWGGT 1 cut(s) 554
Csp6I GTAC 3 cut(s) 79, 331, 947
CviAII CATG 6 cut(s) 649, 702, 950, 1019, 1182, 1220
CviQI GTAC 3 cut(s) 79, 331, 947
DdeI CTNAG 6 cut(s) 117, 644, 723, 864, 1001, 1089
DpnI GATC 3 cut(s) 534, 681, 788
DpnII GATC 3 cut(s) 532, 679, 786
DraI TTTAAA 2 cut(s) 381, 1098
Eam1104I CTCTTC 1 cut(s) 573
EarI CTCTTC 1 cut(s) 573
EciI GGCGGA 1 cut(s) 799
Ecl136II GAGCTC 1 cut(s) 217
Eco130I CCWWGG 3 cut(s) 611, 1018, 1062
Eco24I GRGCYC 2 cut(s) 219, 1142
Eco32I GATATC 1 cut(s) 1147
Eco47I GGWCC 1 cut(s) 1162
Eco53kI GAGCTC 1 cut(s) 217
Eco57I CTGAAG 1 cut(s) 821
Eco81I CCTNAGG 1 cut(s) 864
Eco88I CYCGRG 2 cut(s) 258, 391
EcoICRI GAGCTC 1 cut(s) 217
EcoO109I RGGNCCY 4 cut(s) 223, 1138, 1139, 1162
EcoRII CCWGG 3 cut(s) 53, 69, 554
EcoRV GATATC 1 cut(s) 1147
EcoT14I CCWWGG 3 cut(s) 611, 1018, 1062
EcoT38I GRGCYC 2 cut(s) 219, 1142
ErhI CCWWGG 3 cut(s) 611, 1018, 1062
FaeI CATG 6 cut(s) 652, 705, 953, 1022, 1185, 1223
FaqI GGGAC 1 cut(s) 827
FatI CATG 6 cut(s) 648, 701, 949, 1018, 1181, 1219
Fnu4HI GCNGC 3 cut(s) 293, 367, 1212
FokI GGATG 3 cut(s) 689, 851, 860
FriOI GRGCYC 2 cut(s) 219, 1142
Fsp4HI GCNGC 3 cut(s) 293, 367, 1212
FspBI CTAG 3 cut(s) 446, 876, 1260
GluI GCNGC 3 cut(s) 293, 367, 1212
GsaI CCCAGC 1 cut(s) 924
GsuI CTGGAG 1 cut(s) 76
HaeIII GGCC 3 cut(s) 224, 459, 1140
HapII CCGG 3 cut(s) 450, 845, 1215
Hin1II CATG 6 cut(s) 652, 705, 953, 1022, 1185, 1223
HinfI GANTC 8 cut(s) 100, 142, 287, 494, 583, 607, 631, 1151
HpaII CCGG 3 cut(s) 450, 845, 1215
HphI GGTGA 3 cut(s) 489, 819, 1093
Hpy166II GTNNAC 2 cut(s) 515, 884
Hpy188I TCNGA 6 cut(s) 191, 348, 588, 754, 801, 1015
Hpy188III TCNNGA 6 cut(s) 272, 393, 683, 876, 1055, 1220
Hpy8I GTNNAC 2 cut(s) 515, 884
HpyAV CCTTC 6 cut(s) 467, 665, 796, 800, 1078, 1275
HpyCH4III ACNGT 5 cut(s) 431, 901, 971, 977, 1114
HpyCH4IV ACGT 1 cut(s) 90
HpyCH4V TGCA 9 cut(s) 123, 170, 229, 369, 884, 1124, 1185, 1226, 1286
HpyF10VI GCNNNNNNNGC 1 cut(s) 209
HpyF3I CTNAG 6 cut(s) 117, 644, 723, 864, 1001, 1089
HpySE526I ACGT 1 cut(s) 90
Hsp92II CATG 6 cut(s) 652, 705, 953, 1022, 1185, 1223
Kzo9I GATC 3 cut(s) 532, 679, 786
LmnI GCTCC 2 cut(s) 57, 1132
Lsp1109I GCAGC 3 cut(s) 304, 353, 1198
LweI GCATC 2 cut(s) 1213, 1273
MabI ACCWGGT 1 cut(s) 554
MaeI CTAG 3 cut(s) 446, 876, 1260
MaeII ACGT 1 cut(s) 90
MaeIII GTNAC 5 cut(s) 478, 691, 825, 965, 971
MalI GATC 3 cut(s) 534, 681, 788
MboI GATC 3 cut(s) 532, 679, 786
MboII GAAGA 2 cut(s) 560, 664
MflI RGATCY 1 cut(s) 786
MhlI GDGCHC 3 cut(s) 219, 886, 1142
MluCI AATT 9 cut(s) 184, 575, 708, 757, 772, 857, 986, 1093, 1195
MlyI GAGTC 2 cut(s) 109, 281
MseI TTAA 6 cut(s) 360, 380, 627, 906, 1097, 1175
MslI CAYNNNNRTG 2 cut(s) 700, 1023
MspA1I CMGCKG 1 cut(s) 295
MspI CCGG 3 cut(s) 450, 845, 1215
MspR9I CCNGG 4 cut(s) 55, 71, 556, 845
Mva1269I GAATGC 3 cut(s) 595, 661, 814
MvaI CCWGG 3 cut(s) 55, 71, 556
MwoI GCNNNNNNNGC 1 cut(s) 209
NciI CCSGG 1 cut(s) 845
NcoI CCATGG 1 cut(s) 1018
NdeII GATC 3 cut(s) 532, 679, 786
NlaIII CATG 6 cut(s) 652, 705, 953, 1022, 1185, 1223
NlaIV GGNNCC 3 cut(s) 788, 1140, 1164
NmuCI GTSAC 4 cut(s) 691, 825, 965, 971
NspI RCATGY 2 cut(s) 953, 1185
NspV TTCGAA 1 cut(s) 145
PaeR7I CTCGAG 1 cut(s) 391
PagI TCATGA 1 cut(s) 1219
PasI CCCWGGG 1 cut(s) 70
PciI ACATGT 1 cut(s) 949
PctI GAATGC 3 cut(s) 595, 661, 814
PfeI GAWTC 6 cut(s) 142, 494, 583, 607, 631, 1151
PflMI CCANNNNNTGG 1 cut(s) 466
PfoI TCCNGGA 2 cut(s) 53, 843
PkrI GCNGC 3 cut(s) 294, 368, 1213
PleI GAGTC 2 cut(s) 108, 281
PpsI GAGTC 2 cut(s) 108, 281
PpuMI RGGWCCY 1 cut(s) 1162
PscI ACATGT 1 cut(s) 949
Psp124BI GAGCTC 1 cut(s) 219
Psp5II RGGWCCY 1 cut(s) 1162
Psp6I CCWGG 3 cut(s) 53, 69, 554
PspFI CCCAGC 1 cut(s) 920
PspGI CCWGG 3 cut(s) 53, 69, 554
PspN4I GGNNCC 3 cut(s) 788, 1140, 1164
PspOMI GGGCCC 1 cut(s) 1138
PspPI GGNCC 5 cut(s) 223, 457, 1138, 1139, 1162
PspPPI RGGWCCY 1 cut(s) 1162
PsrI GAACNNNNNNTAC 2 cut(s) 507, 539
PstNI CAGNNNCTG 1 cut(s) 975
PsuI RGATCY 1 cut(s) 786
PvuII CAGCTG 1 cut(s) 295
RsaI GTAC 3 cut(s) 80, 332, 948
RsaNI GTAC 3 cut(s) 79, 331, 947
RseI CAYNNNNRTG 2 cut(s) 700, 1023
SacI GAGCTC 1 cut(s) 219
SaqAI TTAA 6 cut(s) 360, 380, 627, 906, 1097, 1175
SatI GCNGC 3 cut(s) 293, 367, 1212
Sau3AI GATC 3 cut(s) 532, 679, 786
Sau96I GGNCC 5 cut(s) 223, 457, 1138, 1139, 1162
SchI GAGTC 2 cut(s) 109, 281
ScrFI CCNGG 4 cut(s) 55, 71, 556, 845
SduI GDGCHC 3 cut(s) 219, 886, 1142
SexAI ACCWGGT 1 cut(s) 554
SfaNI GCATC 2 cut(s) 1213, 1273
Sfr274I CTCGAG 1 cut(s) 391
SfuI TTCGAA 1 cut(s) 145
SinI GGWCC 1 cut(s) 1162
SlaI CTCGAG 1 cut(s) 391
SmiMI CAYNNNNRTG 2 cut(s) 700, 1023
SmlI CTYRAG 4 cut(s) 218, 272, 391, 527
SmoI CTYRAG 4 cut(s) 218, 272, 391, 527
Sse9I AATT 9 cut(s) 184, 575, 708, 757, 772, 857, 986, 1093, 1195
SsiI CCGC 2 cut(s) 735, 784
SspMI CTAG 3 cut(s) 446, 876, 1260
SstI GAGCTC 1 cut(s) 219
StyD4I CCNGG 4 cut(s) 53, 69, 554, 843
StyI CCWWGG 3 cut(s) 611, 1018, 1062
TaaI ACNGT 5 cut(s) 431, 901, 971, 977, 1114
TaiI ACGT 1 cut(s) 93
TaqI TCGA 6 cut(s) 145, 314, 392, 550, 1068, 1149
TasI AATT 9 cut(s) 184, 575, 708, 757, 772, 857, 986, 1093, 1195
TatI WGTACW 1 cut(s) 946
TfiI GAWTC 6 cut(s) 142, 494, 583, 607, 631, 1151
Tru1I TTAA 6 cut(s) 360, 380, 627, 906, 1097, 1175
Tru9I TTAA 6 cut(s) 360, 380, 627, 906, 1097, 1175
TscAI CASTG 4 cut(s) 125, 906, 964, 976
TseFI GTSAC 4 cut(s) 691, 825, 965, 971
TseI GCWGC 3 cut(s) 292, 366, 1211
Tsp45I GTSAC 4 cut(s) 691, 825, 965, 971
TspDTI ATGAA 4 cut(s) 596, 665, 1064, 1257
TspGWI ACGGA 1 cut(s) 171
TspRI CASTG 4 cut(s) 125, 906, 964, 976
Van91I CCANNNNNTGG 1 cut(s) 466
VneI GTGCAC 1 cut(s) 882
VpaK11BI GGWCC 1 cut(s) 1162
XapI RAATTY 2 cut(s) 986, 1093
XbaI TCTAGA 1 cut(s) 875
XceI RCATGY 2 cut(s) 953, 1185
XhoI CTCGAG 1 cut(s) 391
XspI CTAG 3 cut(s) 446, 876, 1260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.