Plant mobile domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| CID | PF04818 | 9 - 121 | 2.5e-36 | CID domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 808 |
| Acc36I | ACCTGC | 1 cut(s) | 808 |
| AccB1I | GGYRCC | 1 cut(s) | 1405 |
| AccII | CGCG | 1 cut(s) | 367 |
| AciI | CCGC | 5 cut(s) | 367, 856, 1184, 1188, 1385 |
| AclWI | GGATC | 3 cut(s) | 641, 654, 1151 |
| AcoI | YGGCCR | 1 cut(s) | 1502 |
| AcsI | RAATTY | 2 cut(s) | 230, 910 |
| AcuI | CTGAAG | 2 cut(s) | 1056, 1493 |
| AdeI | CACNNNGTG | 1 cut(s) | 535 |
| AfaI | GTAC | 1 cut(s) | 634 |
| AfeI | AGCGCT | 1 cut(s) | 434 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 246, 1316 |
| AgsI | TTSAA | 6 cut(s) | 167, 700, 731, 1122, 1280, 1484 |
| AhlI | ACTAGT | 1 cut(s) | 748 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 372, 404 |
| AleI | CACNNNNGTG | 1 cut(s) | 88 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 128, 160 |
| AluBI | AGCT | 9 cut(s) | 40, 49, 113, 266, 506, 770, 959, 976, 1262 |
| AluI | AGCT | 9 cut(s) | 40, 49, 113, 266, 506, 770, 959, 976, 1262 |
| Alw21I | GWGCWC | 1 cut(s) | 268 |
| Alw26I | GTCTC | 3 cut(s) | 319, 363, 1419 |
| AlwI | GGATC | 3 cut(s) | 641, 654, 1151 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 630 |
| Ama87I | CYCGRG | 1 cut(s) | 677 |
| Aor51HI | AGCGCT | 1 cut(s) | 434 |
| AoxI | GGCC | 2 cut(s) | 1054, 1502 |
| ApoI | RAATTY | 2 cut(s) | 230, 910 |
| AseI | ATTAAT | 1 cut(s) | 279 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 143 |
| AspLEI | GCGC | 2 cut(s) | 435, 1195 |
| AspS9I | GGNCC | 2 cut(s) | 1140, 1367 |
| AsuC2I | CCSGG | 1 cut(s) | 1518 |
| AsuHPI | GGTGA | 4 cut(s) | 547, 554, 584, 1440 |
| AsuII | TTCGAA | 1 cut(s) | 805 |
| AvaI | CYCGRG | 1 cut(s) | 677 |
| AvaII | GGWCC | 2 cut(s) | 1140, 1367 |
| BaeGI | GKGCMC | 1 cut(s) | 1115 |
| BamHI | GGATCC | 1 cut(s) | 646 |
| BanI | GGYRCC | 1 cut(s) | 1405 |
| BanII | GRGCYC | 1 cut(s) | 268 |
| Bbv12I | GWGCWC | 1 cut(s) | 268 |
| BccI | CCATC | 4 cut(s) | 901, 1099, 1294, 1318 |
| BceAI | ACGGC | 1 cut(s) | 878 |
| BcnI | CCSGG | 1 cut(s) | 1518 |
| BcoDI | GTCTC | 3 cut(s) | 319, 363, 1419 |
| BcuI | ACTAGT | 1 cut(s) | 748 |
| BfaI | CTAG | 5 cut(s) | 318, 749, 987, 1364, 1494 |
| BfmI | CTRYAG | 3 cut(s) | 203, 585, 945 |
| BfoI | RGCGCY | 1 cut(s) | 436 |
| BfuAI | ACCTGC | 1 cut(s) | 808 |
| Bme1390I | CCNGG | 1 cut(s) | 1518 |
| Bme18I | GGWCC | 2 cut(s) | 1140, 1367 |
| BmeT110I | CYCGRG | 1 cut(s) | 677 |
| BmgT120I | GGNCC | 2 cut(s) | 1140, 1367 |
| BmiI | GGNNCC | 4 cut(s) | 371, 648, 1227, 1407 |
| BmrFI | CCNGG | 1 cut(s) | 1518 |
| BmsI | GCATC | 2 cut(s) | 550, 895 |
| BpmI | CTGGAG | 1 cut(s) | 815 |
| Bpu14I | TTCGAA | 1 cut(s) | 805 |
| BpuMI | CCSGG | 1 cut(s) | 1518 |
| BsaI | GGTCTC | 1 cut(s) | 363 |
| BsaJI | CCNNGG | 3 cut(s) | 298, 411, 915 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 128, 158 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 246, 1316 |
| Bse1I | ACTGG | 3 cut(s) | 92, 798, 1148 |
| Bse3DI | GCAATG | 2 cut(s) | 951, 1227 |
| BseDI | CCNNGG | 3 cut(s) | 298, 411, 915 |
| BseGI | GGATG | 3 cut(s) | 198, 1091, 1286 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 246, 1316 |
| BseMI | GCAATG | 2 cut(s) | 951, 1227 |
| BseMII | CTCAG | 2 cut(s) | 498, 1430 |
| BseNI | ACTGG | 3 cut(s) | 92, 798, 1148 |
| BseRI | GAGGAG | 2 cut(s) | 358, 695 |
| BseSI | GKGCMC | 1 cut(s) | 1115 |
| BseYI | CCCAGC | 2 cut(s) | 60, 1458 |
| BsgI | GTGCAG | 1 cut(s) | 522 |
| Bsh1236I | CGCG | 1 cut(s) | 367 |
| BshFI | GGCC | 2 cut(s) | 1056, 1504 |
| BshNI | GGYRCC | 1 cut(s) | 1405 |
| BsiHKAI | GWGCWC | 1 cut(s) | 268 |
| BsiHKCI | CYCGRG | 1 cut(s) | 677 |
| BsiSI | CCGG | 2 cut(s) | 1501, 1518 |
| BslFI | GGGAC | 2 cut(s) | 158, 1232 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 246, 1316 |
| BsmAI | GTCTC | 3 cut(s) | 319, 363, 1419 |
| BsmFI | GGGAC | 2 cut(s) | 158, 1232 |
| BsmI | GAATGC | 1 cut(s) | 1054 |
| BsnI | GGCC | 2 cut(s) | 1056, 1504 |
| Bso31I | GGTCTC | 1 cut(s) | 363 |
| BsoBI | CYCGRG | 1 cut(s) | 677 |
| Bsp119I | TTCGAA | 1 cut(s) | 805 |
| Bsp1286I | GDGCHC | 2 cut(s) | 268, 1115 |
| Bsp143I | GATC | 3 cut(s) | 537, 646, 1156 |
| Bsp19I | CCATGG | 1 cut(s) | 298 |
| BspACI | CCGC | 5 cut(s) | 367, 856, 1184, 1188, 1385 |
| BspANI | GGCC | 2 cut(s) | 1056, 1504 |
| BspCNI | CTCAG | 2 cut(s) | 499, 1429 |
| BspFNI | CGCG | 1 cut(s) | 367 |
| BspHI | TCATGA | 1 cut(s) | 1323 |
| BspLI | GGNNCC | 4 cut(s) | 371, 648, 1227, 1407 |
| BspMAI | CTGCAG | 2 cut(s) | 589, 949 |
| BspMI | ACCTGC | 1 cut(s) | 808 |
| BspPI | GGATC | 3 cut(s) | 641, 654, 1151 |
| BspT104I | TTCGAA | 1 cut(s) | 805 |
| BspT107I | GGYRCC | 1 cut(s) | 1405 |
| BspTNI | GGTCTC | 1 cut(s) | 363 |
| BsrDI | GCAATG | 2 cut(s) | 951, 1227 |
| BsrI | ACTGG | 3 cut(s) | 92, 798, 1148 |
| BssECI | CCNNGG | 3 cut(s) | 298, 411, 915 |
| BssMI | GATC | 3 cut(s) | 537, 646, 1156 |
| BssT1I | CCWWGG | 3 cut(s) | 298, 411, 915 |
| Bst4CI | ACNGT | 2 cut(s) | 144, 626 |
| Bst6I | CTCTTC | 3 cut(s) | 333, 1032, 1081 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 400, 953, 1426 |
| BstBI | TTCGAA | 1 cut(s) | 805 |
| BstC8I | GCNNGC | 6 cut(s) | 215, 365, 847, 978, 1054, 1188 |
| BstDEI | CTNAG | 3 cut(s) | 507, 1416, 1551 |
| BstDSI | CCRYGG | 1 cut(s) | 298 |
| BstF5I | GGATG | 3 cut(s) | 198, 1091, 1286 |
| BstFNI | CGCG | 1 cut(s) | 367 |
| BstH2I | RGCGCY | 1 cut(s) | 436 |
| BstHHI | GCGC | 2 cut(s) | 435, 1195 |
| BstKTI | GATC | 3 cut(s) | 540, 649, 1159 |
| BstMAI | GTCTC | 3 cut(s) | 319, 363, 1419 |
| BstMBI | GATC | 3 cut(s) | 537, 646, 1156 |
| BstNSI | RCATGY | 1 cut(s) | 856 |
| BstSCI | CCNGG | 1 cut(s) | 1516 |
| BstSFI | CTRYAG | 3 cut(s) | 203, 585, 945 |
| BstSLI | GKGCMC | 1 cut(s) | 1115 |
| BstUI | CGCG | 1 cut(s) | 367 |
| BstX2I | RGATCY | 2 cut(s) | 646, 1156 |
| BstYI | RGATCY | 2 cut(s) | 646, 1156 |
| BsuRI | GGCC | 2 cut(s) | 1056, 1504 |
| BtgI | CCRYGG | 1 cut(s) | 298 |
| BtgZI | GCGATG | 1 cut(s) | 306 |
| BtsCI | GGATG | 3 cut(s) | 198, 1091, 1286 |
| BtsI | GCAGTG | 2 cut(s) | 71, 710 |
| BtsIMutI | CAGTG | 7 cut(s) | 22, 71, 85, 427, 631, 710, 1113 |
| BveI | ACCTGC | 1 cut(s) | 808 |
| Cac8I | GCNNGC | 6 cut(s) | 215, 365, 847, 978, 1054, 1188 |
| CaiI | CAGNNNCTG | 1 cut(s) | 630 |
| CciI | TCATGA | 1 cut(s) | 1323 |
| CfoI | GCGC | 2 cut(s) | 435, 1195 |
| Cfr13I | GGNCC | 2 cut(s) | 1140, 1367 |
| Csp6I | GTAC | 1 cut(s) | 633 |
| CviAII | CATG | 8 cut(s) | 132, 299, 776, 853, 1144, 1244, 1324, 1426 |
| CviQI | GTAC | 1 cut(s) | 633 |
| DdeI | CTNAG | 3 cut(s) | 507, 1416, 1551 |
| DpnI | GATC | 3 cut(s) | 539, 648, 1158 |
| DpnII | GATC | 3 cut(s) | 537, 646, 1156 |
| DraIII | CACNNNGTG | 1 cut(s) | 535 |
| EaeI | YGGCCR | 1 cut(s) | 1502 |
| Eam1104I | CTCTTC | 3 cut(s) | 333, 1032, 1081 |
| EarI | CTCTTC | 3 cut(s) | 333, 1032, 1081 |
| Ecl136II | GAGCTC | 1 cut(s) | 266 |
| Eco130I | CCWWGG | 3 cut(s) | 298, 411, 915 |
| Eco24I | GRGCYC | 1 cut(s) | 268 |
| Eco31I | GGTCTC | 1 cut(s) | 363 |
| Eco47I | GGWCC | 2 cut(s) | 1140, 1367 |
| Eco47III | AGCGCT | 1 cut(s) | 434 |
| Eco53kI | GAGCTC | 1 cut(s) | 266 |
| Eco57I | CTGAAG | 2 cut(s) | 1056, 1493 |
| Eco88I | CYCGRG | 1 cut(s) | 677 |
| EcoICRI | GAGCTC | 1 cut(s) | 266 |
| EcoT14I | CCWWGG | 3 cut(s) | 298, 411, 915 |
| EcoT38I | GRGCYC | 1 cut(s) | 268 |
| ErhI | CCWWGG | 3 cut(s) | 298, 411, 915 |
| FaeI | CATG | 8 cut(s) | 135, 302, 779, 856, 1147, 1247, 1327, 1429 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 754, 786 |
| FaqI | GGGAC | 2 cut(s) | 158, 1232 |
| FatI | CATG | 8 cut(s) | 131, 298, 775, 852, 1143, 1243, 1323, 1425 |
| FauI | CCCGC | 1 cut(s) | 1195 |
| FauNDI | CATATG | 3 cut(s) | 813, 1272, 1389 |
| FokI | GGATG | 3 cut(s) | 185, 1078, 1273 |
| FriOI | GRGCYC | 1 cut(s) | 268 |
| FspBI | CTAG | 5 cut(s) | 318, 749, 987, 1364, 1494 |
| GlaI | GCGC | 2 cut(s) | 434, 1194 |
| GsaI | CCCAGC | 2 cut(s) | 64, 1462 |
| GsuI | CTGGAG | 1 cut(s) | 815 |
| HaeII | RGCGCY | 1 cut(s) | 436 |
| HaeIII | GGCC | 2 cut(s) | 1056, 1504 |
| HapII | CCGG | 2 cut(s) | 1501, 1518 |
| HhaI | GCGC | 2 cut(s) | 435, 1195 |
| Hin1II | CATG | 8 cut(s) | 135, 302, 779, 856, 1147, 1247, 1327, 1429 |
| Hin6I | GCGC | 2 cut(s) | 433, 1193 |
| HinP1I | GCGC | 2 cut(s) | 433, 1193 |
| HincII | GTYRAC | 2 cut(s) | 622, 1176 |
| HindII | GTYRAC | 2 cut(s) | 622, 1176 |
| HindIII | AAGCTT | 2 cut(s) | 768, 974 |
| HinfI | GANTC | 4 cut(s) | 464, 785, 1118, 1240 |
| HpaII | CCGG | 2 cut(s) | 1501, 1518 |
| HphI | GGTGA | 4 cut(s) | 547, 554, 584, 1440 |
| Hpy166II | GTNNAC | 4 cut(s) | 592, 622, 1176, 1339 |
| Hpy188I | TCNGA | 5 cut(s) | 105, 449, 479, 790, 1156 |
| Hpy188III | TCNNGA | 3 cut(s) | 318, 1314, 1324 |
| Hpy8I | GTNNAC | 4 cut(s) | 592, 622, 1176, 1339 |
| HpyAV | CCTTC | 3 cut(s) | 244, 281, 1547 |
| HpyCH4III | ACNGT | 2 cut(s) | 144, 626 |
| HpyCH4IV | ACGT | 1 cut(s) | 439 |
| HpyF3I | CTNAG | 3 cut(s) | 507, 1416, 1551 |
| HpySE526I | ACGT | 1 cut(s) | 439 |
| Hsp92II | CATG | 8 cut(s) | 135, 302, 779, 856, 1147, 1247, 1327, 1429 |
| HspAI | GCGC | 2 cut(s) | 433, 1193 |
| Kzo9I | GATC | 3 cut(s) | 537, 646, 1156 |
| LmnI | GCTCC | 2 cut(s) | 105, 369 |
| LweI | GCATC | 2 cut(s) | 550, 895 |
| MaeI | CTAG | 5 cut(s) | 318, 749, 987, 1364, 1494 |
| MaeII | ACGT | 1 cut(s) | 439 |
| MaeIII | GTNAC | 3 cut(s) | 81, 124, 235 |
| MalI | GATC | 3 cut(s) | 539, 648, 1158 |
| MboI | GATC | 3 cut(s) | 537, 646, 1156 |
| MflI | RGATCY | 2 cut(s) | 646, 1156 |
| MhlI | GDGCHC | 2 cut(s) | 268, 1115 |
| MmeI | TCCRAC | 1 cut(s) | 588 |
| MroXI | GAANNNNTTC | 1 cut(s) | 143 |
| MseI | TTAA | 6 cut(s) | 270, 279, 720, 761, 888, 1478 |
| MslI | CAYNNNNRTG | 2 cut(s) | 88, 1430 |
| MspA1I | CMGCKG | 2 cut(s) | 506, 1190 |
| MspI | CCGG | 2 cut(s) | 1501, 1518 |
| MspR9I | CCNGG | 1 cut(s) | 1518 |
| Mva1269I | GAATGC | 1 cut(s) | 1054 |
| MvnI | CGCG | 1 cut(s) | 367 |
| NciI | CCSGG | 1 cut(s) | 1518 |
| NcoI | CCATGG | 1 cut(s) | 298 |
| NdeI | CATATG | 3 cut(s) | 813, 1272, 1389 |
| NdeII | GATC | 3 cut(s) | 537, 646, 1156 |
| NlaIII | CATG | 8 cut(s) | 135, 302, 779, 856, 1147, 1247, 1327, 1429 |
| NlaIV | GGNNCC | 4 cut(s) | 371, 648, 1227, 1407 |
| NmeAIII | GCCGAG | 1 cut(s) | 589 |
| NmuCI | GTSAC | 1 cut(s) | 81 |
| NspI | RCATGY | 1 cut(s) | 856 |
| NspV | TTCGAA | 1 cut(s) | 805 |
| OliI | CACNNNNGTG | 1 cut(s) | 88 |
| PaeR7I | CTCGAG | 1 cut(s) | 677 |
| PagI | TCATGA | 1 cut(s) | 1323 |
| PaqCI | CACCTGC | 1 cut(s) | 808 |
| PctI | GAATGC | 1 cut(s) | 1054 |
| PdmI | GAANNNNTTC | 1 cut(s) | 143 |
| PfeI | GAWTC | 4 cut(s) | 464, 785, 1118, 1240 |
| PshBI | ATTAAT | 1 cut(s) | 279 |
| Psp124BI | GAGCTC | 1 cut(s) | 268 |
| PspFI | CCCAGC | 2 cut(s) | 60, 1458 |
| PspN4I | GGNNCC | 4 cut(s) | 371, 648, 1227, 1407 |
| PspPI | GGNCC | 2 cut(s) | 1140, 1367 |
| PspXI | VCTCGAGB | 1 cut(s) | 677 |
| PstI | CTGCAG | 2 cut(s) | 589, 949 |
| PstNI | CAGNNNCTG | 1 cut(s) | 630 |
| PsuI | RGATCY | 2 cut(s) | 646, 1156 |
| PvuII | CAGCTG | 1 cut(s) | 506 |
| RsaI | GTAC | 1 cut(s) | 634 |
| RsaNI | GTAC | 1 cut(s) | 633 |
| RseI | CAYNNNNRTG | 2 cut(s) | 88, 1430 |
| SacI | GAGCTC | 1 cut(s) | 268 |
| SaqAI | TTAA | 6 cut(s) | 270, 279, 720, 761, 888, 1478 |
| Sau3AI | GATC | 3 cut(s) | 537, 646, 1156 |
| Sau96I | GGNCC | 2 cut(s) | 1140, 1367 |
| ScrFI | CCNGG | 1 cut(s) | 1518 |
| SduI | GDGCHC | 2 cut(s) | 268, 1115 |
| SfaNI | GCATC | 2 cut(s) | 550, 895 |
| SfcI | CTRYAG | 3 cut(s) | 203, 585, 945 |
| Sfr274I | CTCGAG | 1 cut(s) | 677 |
| SfuI | TTCGAA | 1 cut(s) | 805 |
| SinI | GGWCC | 2 cut(s) | 1140, 1367 |
| SlaI | CTCGAG | 1 cut(s) | 677 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 88, 1430 |
| SmlI | CTYRAG | 1 cut(s) | 677 |
| SmoI | CTYRAG | 1 cut(s) | 677 |
| SpeI | ACTAGT | 1 cut(s) | 748 |
| SsiI | CCGC | 5 cut(s) | 367, 856, 1184, 1188, 1385 |
| SspI | AATATT | 1 cut(s) | 1301 |
| SspMI | CTAG | 5 cut(s) | 318, 749, 987, 1364, 1494 |
| SstI | GAGCTC | 1 cut(s) | 268 |
| StyD4I | CCNGG | 1 cut(s) | 1516 |
| StyI | CCWWGG | 3 cut(s) | 298, 411, 915 |
| TaaI | ACNGT | 2 cut(s) | 144, 626 |
| TaiI | ACGT | 1 cut(s) | 442 |
| TaqI | TCGA | 3 cut(s) | 72, 678, 805 |
| TatI | WGTACW | 1 cut(s) | 632 |
| TauI | GCSGC | 1 cut(s) | 1186 |
| TfiI | GAWTC | 4 cut(s) | 464, 785, 1118, 1240 |
| Tru1I | TTAA | 6 cut(s) | 270, 279, 720, 761, 888, 1478 |
| Tru9I | TTAA | 6 cut(s) | 270, 279, 720, 761, 888, 1478 |
| TscAI | CASTG | 7 cut(s) | 22, 71, 92, 427, 631, 710, 1120 |
| TseFI | GTSAC | 1 cut(s) | 81 |
| Tsp45I | GTSAC | 1 cut(s) | 81 |
| TspGWI | ACGGA | 1 cut(s) | 670 |
| TspRI | CASTG | 7 cut(s) | 22, 71, 92, 427, 631, 710, 1120 |
| VpaK11BI | GGWCC | 2 cut(s) | 1140, 1367 |
| VspI | ATTAAT | 1 cut(s) | 279 |
| XapI | RAATTY | 2 cut(s) | 230, 910 |
| XbaI | TCTAGA | 1 cut(s) | 317 |
| XceI | RCATGY | 1 cut(s) | 856 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 958 |
| XhoI | CTCGAG | 1 cut(s) | 677 |
| XmnI | GAANNNNTTC | 1 cut(s) | 143 |
| XspI | CTAG | 5 cut(s) | 318, 749, 987, 1364, 1494 |