FvH4_5g29370

ubiquitinyl hydrolase activity

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
20343765 .. 20350132
6368 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g29370.t1

Sequence Viewer

Length: 1779 bp
ATGGACAAACCGCTTGTGGGTTCCGAGATTCATGGATTTCATACAATGCAAGATTTGGATGTCGACACTATTATGGAGGAAGCCAAAGGGAGATGGCTCCGCCCAAAAGAAATCCATGCATTACTCTATAACTACAAGTATTTCACCATCCATGTCAAGCCAGTGAACTTGCCCCCAAGTGGCACCATTGTATTGTTTGACCGTAAGATGCTTAGAAACTTCAGGAAAGATGGTCATAACTGGAAAAAGAGAAAAGATGGGAAGACAGTCAAAGAATCTCATGAACACTTGAAAGTTGGTGATGAAGAAAGGATTGATGTATACTATGCCCATGGTGAGGATAGCCCAATCTTTGTCCGGAGGTGTTATTGGCTGCTTGATAAGACTCTAGAAGACATAGTTCTTGTTCATTACCGTGAAACACAGGAGGCCGTGGCGGGCGCTGCTCTTCACGCCGTTGAGAAGGATGAGTGCAGTGTAGCTCCACTTGGGTCTGTTGCTGCTAGTAAAATGAAGCATGGGAAGGCTGATAAATTGAATCAAGGAAATGCTAGACTGAAGAATCTAAGGGTGCGTAAACTTATTCAGAAGGCTCGTATAATGAGGAAGCGGAAAGTGGAGGAGGATCATGAAACTGTGACATTCACATGGAGAATTAACAGTTTCTCTAAACTATACACCTTCAAGCATTACTCCGAGATTTTCAGCATCGGTGATTTCAAATGGCGGATCCTTATGTATCCAAAGGGAAACAAGGAGGACCACTTATCGGTGTACTTGGATATTTCATCTACTACGGCATTCCCACTTGGCTGGTCTAAATATGCCAAATTCAGCTTAACCTTGGTTAATCAACTTTGGCGCCGCAAGTCAATAACAAAGGAGATTCATGTGTTCAAAGATTGTGAGATGGATTATTGTGGCTTCAAATCATTAGTTCCTCTTAGTCAATTCTATGACTATGGTAATGGGTACATTGTGAATGATATATGCATAATTGAAGCCAAGGTTGCAGTGCGTAAAGATGATGCAAAGATTTTACAAGACCATGGAATTTCTGCATGTATGGAACCCTTAGAGAAGGAAAAAGAAGGGCAGGGACCGTCAAATGCGCAGCCTGTGAATGTTCCAGATATTTCCGCACAATTGGAGACACCGTGTTGTGAACAGGTGCCTGCCAGCTACCACAGTGCACCAATTTCTGAACAAATTGGCACTGACCTTCCTAACATTTCCATTCCCAAGGGAATTAAGGACGTGTTGTCCACATCAGCTGATGAGCTAATGGATTTCAGGGGTTTAGCCAAAATAGAAAAGGCTTGTGTTCCACTGTTAGATGAAGTTTGTTCCTGTCACTCTTCTCTCATTAAATGCCAAATGAAGCGAAGTCCAAAGTTTAAAGAGTGGGCATTCACAGCCTTAGGCCGAGTTCTACATTTTTTGAAAACAAAAATGGTTAAAGATATGACAGATGATGTCTGTGCAGAGCTAGAATGTCTATGGGAAGAGCTCCAGGCCTTCAAATTTGACTTGGCTTGGCTGAAGCCTTATGTTGAAAGAGCTTTGTGTGTCAATAAGTTGGTCAAAAGGGAAGTACAGAGCTTGAGAAAGGGTGTGGATGAATTGGAGATTGAAAAGAAGAGGCTAATGGCTAAGCTTGAGGTAGCAAGAAGAGAATTGGAAAAGGTCGAAGGTGTTGAGAAGATGGACATGGATAAGGTGCTAGGTTATGGGGGTTGGCCGTTCTGTGGAATTCTGAATTTTGAGAATTGTCCTTGA
Functional Annotation

Protein Analysis

593

Amino Acids

68.11

Weight (kDa)

8.37

Isoelectric Point (pI)

42.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CG-1 PF03859 27 - 140 6.4e-44 CG-1 domain
MATH_2 PF22486 214 - 337 1.5e-28 MATH domain
MATH PF00917 220 - 339 6.6e-12 MATH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000025)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31370 AT1G31380 AT1G31390 AT1G31400 AT2G01790 AT2G05400 AT2G05400 AT2G05400 AT2G05410 AT2G05410 AT2G05420 AT2G05430 AT2G42455 AT2G42460 AT2G42465 AT2G42470 AT2G42475 AT2G42480 AT3G27040 AT3G29580 AT3G44790 AT3G44800 AT3G44805 AT3G58200 AT3G58210 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58230 AT3G58240 AT3G58250 AT3G58260 AT3G58270 AT3G58270 AT3G58270 AT3G58280 AT3G58290 AT3G58290 AT3G58290 AT3G58300 AT3G58320 AT3G58330 AT3G58340 AT3G58340 AT3G58350 AT3G58350 AT3G58360 AT3G58370 AT3G58380 AT3G58400 AT3G58410 AT3G58410 AT3G58430 AT3G58430 AT3G58440 AT5G03550
fragaria_vesca FvH4_2g00084 FvH4_2g15701 FvH4_2g24334 FvH4_3g23322 FvH4_3g23322 FvH4_3g23322 FvH4_3g23482 FvH4_3g23482 FvH4_3g23482 FvH4_3g23491 FvH4_3g23492 FvH4_3g23510 FvH4_3g23520 FvH4_3g23520 FvH4_3g23520 FvH4_3g23580 FvH4_3g38842 FvH4_4g10396 FvH4_5g29370 FvH4_5g32130 FvH4_7g04570 FvH4_7g04571 FvH4_7g04741 FvH4_7g04741 FvH4_7g04750 FvH4_7g04750 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04770 FvH4_7g04770 FvH4_7g04770
malus_domestica MD00G1065000.v1.1 MD00G1065300.v1.1 MD02G1267400.v1.1 MD02G1267600.v1.1 MD02G1267700.v1.1 MD02G1267800.v1.1 MD02G1268100.v1.1 MD02G1268300.v1.1 MD02G1268400.v1.1 MD02G1268500.v1.1 MD03G1193600.v1.1 MD05G1071400.v1.1 MD07G1051000.v1.1 MD07G1051100.v1.1 MD07G1051200.v1.1 MD07G1051300.v1.1 MD07G1051500.v1.1 MD07G1051700.v1.1 MD07G1051800.v1.1 MD07G1085400.v1.1 MD07G1085500.v1.1 MD11G1177200.v1.1 MD11G1209800.v1.1 MD11G1209900.v1.1 MD11G1210000.v1.1 MD12G1048100.v1.1 MD12G1048600.v1.1 MD14G1046700.v1.1 MD14G1047400.v1.1
prunus_persica Prupe.2G051200_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052700_v2.0.a1 Prupe.2G052800_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G053100_v2.0.a1 Prupe.2G053300_v2.0.a1 Prupe.2G054800_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.4G223300_v2.0.a1 Prupe.4G223300_v2.0.a1
pyrus_communis pycom01g04720 pycom02g22950 pycom02g22960 pycom02g22970 pycom02g22990 pycom02g23000 pycom02g23010 pycom03g14600 pycom03g14610 pycom05g06150 pycom07g03820 pycom07g03830 pycom07g03850 pycom07g03860 pycom07g03880 pycom07g03890 pycom07g03900 pycom07g04000 pycom07g04010 pycom11g18540 pycom11g18560 pycom12g04190 pycom17g19100
rosa_chinensis RchiOBHm_Chr0c19g0500051 RchiOBHm_Chr1g0330011 RchiOBHm_Chr1g0330031 RchiOBHm_Chr1g0330041 RchiOBHm_Chr1g0330121 RchiOBHm_Chr1g0330141 RchiOBHm_Chr1g0330151 RchiOBHm_Chr1g0330181 RchiOBHm_Chr1g0330191 RchiOBHm_Chr1g0330201 RchiOBHm_Chr1g0330211 RchiOBHm_Chr1g0330221 RchiOBHm_Chr1g0367471 RchiOBHm_Chr2g0113311 RchiOBHm_Chr2g0148281 RchiOBHm_Chr4g0400061 RchiOBHm_Chr4g0437571 RchiOBHm_Chr5g0041361 RchiOBHm_Chr5g0041421 RchiOBHm_Chr5g0041481 RchiOBHm_Chr5g0041491 RchiOBHm_Chr5g0041501 RchiOBHm_Chr5g0041511 RchiOBHm_Chr5g0042491 RchiOBHm_Chr5g0042501 RchiOBHm_Chr6g0263551 RchiOBHm_Chr6g0286221 RchiOBHm_Chr7g0228171 RchiOBHm_Chr7g0231391 RchiOBHm_Chr7g0231401
rosa_laevigata RLG00000000870 RLG00000001420 RLG00000001582 RLG00000001602 RLG00000001700 RLG00000002476 RLG00000005787 RLG00000007689 RLG00000008446 RLG00000008811 RLG00000008812 RLG00000009013 RLG00000009942 RLG00000012752 RLG00000013511 RLG00000014053 RLG00000015257 RLG00000015258 RLG00000016149 RLG00000016691 RLG00000018661 RLG00000018662 RLG00000020991 RLG00000020992 RLG00000020993 RLG00000027309 RLG00000028568 RLG00000029119 RLG00000029371 RLG00000029563 RLG00000029818 RLG00000029819 RLG00000029821 RLG00000029822 RLG00000029824 RLG00000029827 RLG00000029828 RLG00000029829 RLG00000029841 RLG00000029843 RLG00000032676 RLG00000033366 RLG00000033367 RLG00000034023 RLG00000034066 RLG00000034072 RLG00000034073 RLG00000034074 RLG00000034130 RLG00000034133 RLG00000035487 RLG00000035488 RLG00000035793
rosa_multiflora Rmu_co8241405.1_g000001 Rmu_co8251033.1_g000001 Rmu_co8297611.1_g000001 Rmu_co8346639.1_g000001 Rmu_co8405917.1_g000001 Rmu_sc0000045.1_g000044 Rmu_sc0000061.1_g000032 Rmu_sc0000068.1_g000021 Rmu_sc0000068.1_g000022 Rmu_sc0000415.1_g000001 Rmu_sc0000499.1_g000003 Rmu_sc0000594.1_g000020 Rmu_sc0000673.1_g000007 Rmu_sc0000908.1_g000004 Rmu_sc0001123.1_g000013 Rmu_sc0001123.1_g000014 Rmu_sc0001167.1_g000026 Rmu_sc0001598.1_g000011 Rmu_sc0001696.1_g000003 Rmu_sc0001696.1_g000011 Rmu_sc0001696.1_g000019 Rmu_sc0001696.1_g000020 Rmu_sc0003007.1_g000016 Rmu_sc0003007.1_g000029 Rmu_sc0003051.1_g000010 Rmu_sc0003396.1_g000029 Rmu_sc0004798.1_g000020 Rmu_sc0005375.1_g000016 Rmu_sc0005375.1_g000017 Rmu_sc0005659.1_g000033 Rmu_sc0005659.1_g000034 Rmu_sc0006311.1_g000011 Rmu_sc0008249.1_g000002 Rmu_sc0008249.1_g000018 Rmu_sc0008600.1_g000014 Rmu_sc0009365.1_g000010 Rmu_sc0009365.1_g000022 Rmu_sc0009365.1_g000025 Rmu_sc0011112.1_g000008 Rmu_sc0011112.1_g000009 Rmu_sc0012031.1_g000020 Rmu_sc0013350.1_g000014 Rmu_sc0020359.1_g000004 Rmu_sc0021997.1_g000003 Rmu_sc0021997.1_g000004 Rmu_sc0023610.1_g000002 Rmu_sc0023611.1_g000001 Rmu_sc0028894.1_g000001 Rmu_sc0031050.1_g000001 Rmu_sc0041109.1_g000001 Rmu_ssc0000087.1_g000050 Rmu_ssc0000087.1_g000051 Rmu_ssc0000087.1_g000052 Rmu_ssc0000295.1_g000058 Rmu_ssc0000343.1_g000031 Rmu_ssc0000423.1_g000015 Rmu_ssc0000470.1_g000005 Rmu_ssc0000470.1_g000006
rosa_roxburghii Rroxscaffold_1G00005900 Rroxscaffold_1G00005910 Rroxscaffold_1G00012600 Rroxscaffold_1G00016860 Rroxscaffold_1G00032110 Rroxscaffold_1G00038140 Rroxscaffold_1G00038200 Rroxscaffold_1G00039020 Rroxscaffold_1G00039030 Rroxscaffold_1G00039080 Rroxscaffold_1G00039090 Rroxscaffold_1G00039270 Rroxscaffold_2G00097120 Rroxscaffold_2G00097130 Rroxscaffold_2G00137700 Rroxscaffold_2G00151740 Rroxscaffold_2G00151750 Rroxscaffold_3G00224160 Rroxscaffold_3G00224170 Rroxscaffold_3G00226080 Rroxscaffold_3G00226090 Rroxscaffold_3G00229350 Rroxscaffold_3G00231340 Rroxscaffold_4G00291390 Rroxscaffold_4G00316220 Rroxscaffold_4G00316230 Rroxscaffold_4G00320040 Rroxscaffold_4G00320050 Rroxscaffold_4G00320120 Rroxscaffold_4G00320140 Rroxscaffold_4G00320180 Rroxscaffold_4G00320270 Rroxscaffold_4G00320280 Rroxscaffold_4G00320290 Rroxscaffold_4G00320430 Rroxscaffold_4G00321910 Rroxscaffold_5G00348730 Rroxscaffold_5G00355020 Rroxscaffold_5G00355080 Rroxscaffold_5G00357490 Rroxscaffold_5G00376500 Rroxscaffold_5G00376510 Rroxscaffold_7G00179590 Rroxscaffold_7G00179600 Rroxscaffold_7G00198610
rosa_rugosa Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0086300 Rorug01G0086500 Rorug01G0087000 Rorug01G0087100 Rorug01G0087600 Rorug01G0087700 Rorug01G0087800 Rorug01G0087800 Rorug01G0302500 Rorug02G0249300 Rorug02G0249300 Rorug02G0249400 Rorug03G0189000 Rorug04G0181800 Rorug04G0283800.1 Rorug04G0283900.1 Rorug05G0043500 Rorug05G0191800 Rorug05G0191900 Rorug05G0192800 Rorug05G0192900 Rorug05G0193000 Rorug05G0201000 Rorug05G0201100 Rorug06G0173900 Rorug06G0173900 Rorug07G0009800 Rorug07G0246300.1 Rorug07G0246400
rosa_samantha Rh1AG103600 Rh1AG104800 Rh1AG105200 Rh1AG105300 Rh1AG105500 Rh1BG082000 Rh1BG082200 Rh1BG082300 Rh1BG082900 Rh1BG083000 Rh1BG083300 Rh1BG083500 Rh1BG083600 Rh1BG083800 Rh1BG083900 Rh1BG084000 Rh1BG084100 Rh1BG084200 Rh1BG092200 Rh1BG275300 Rh1CG098700 Rh1CG098800 Rh1CG100300 Rh1CG100400 Rh1CG100600 Rh1CG100900 Rh1CG101000 Rh1CG101700 Rh1DG066900 Rh1DG067000 Rh1DG106000 Rh1DG107600 Rh1DG107800 Rh1DG108100 Rh1DG108200 Rh1DG108600 Rh1DG108700 Rh1DG108900 Rh1DG109000 Rh1DG109100 Rh1DG109300 Rh1DG109400 Rh1DG109500 Rh1DG109700 Rh1DG109800 Rh1DG173900 Rh2AG270300 Rh2AG398900 Rh2CG245000 Rh2CG260700 Rh2CG278600 Rh2CG342400 Rh2CG385700 Rh3DG197200 Rh3DG197300 Rh4AG015100 Rh4BG347400 Rh4DG360400 Rh5AG278600 Rh5AG278700 Rh5AG286900 Rh5AG287000 Rh5BG282900 Rh5BG283000 Rh5BG283100 Rh5BG291400 Rh5CG314900 Rh5CG315100 Rh5CG315400 Rh5CG315700 Rh5CG315900 Rh5CG316000 Rh5CG323600 Rh5CG323700 Rh5DG291400 Rh5DG292300 Rh5DG292500 Rh5DG292700 Rh5DG292800 Rh5DG292900 Rh5DG301100 Rh5DG301200 Rh5DG301400 Rh5DG350900 Rh6BG407700 Rh6CG294900 Rh6DG286900 Rh7AG400400 Rh7AG420600 Rh7BG381700 Rh7BG395000 Rh7CG418600 Rh7CG440700 Rh7DG396500 Rh7DG413200
rosa_wichuraiana Rw1G003300 Rw1G008240 Rw1G008250 Rw1G008270 Rw1G008330 Rw1G008340 Rw1G008350 Rw1G008360 Rw1G008370 Rw1G008810 Rw1G021140 Rw3G020650 Rw5G026150 Rw5G026200 Rw5G026240 Rw5G026250 Rw5G026650 Rw5G030820 Rw7G006630 Rw7G030060 Rw7G034700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1113
AccB1I GGYRCC 3 cut(s) 182, 861, 1171
AccI GTMKAC 2 cut(s) 63, 321
AccIII TCCGGA 1 cut(s) 357
AciI CCGC 7 cut(s) 11, 100, 437, 610, 727, 865, 1140
AclWI GGATC 3 cut(s) 633, 724, 737
AcoI YGGCCR 1 cut(s) 1739
AcsI RAATTY 5 cut(s) 830, 1053, 1523, 1752, 1759
AcuI CTGAAG 3 cut(s) 205, 578, 1562
AcyI GRCGYC 1 cut(s) 862
AfaI GTAC 3 cut(s) 776, 974, 1596
AfiI CCNNNNNNNGG 5 cut(s) 17, 179, 337, 769, 1748
AflIII ACRYGT 1 cut(s) 1257
AhdI GACNNNNNGTC 1 cut(s) 1261
AjiI CACGTC 1 cut(s) 1258
AjnI CCWGG 1 cut(s) 1512
Alw21I GWGCWC 2 cut(s) 1195, 1512
Alw26I GTCTC 1 cut(s) 1145
Alw44I GTGCAC 1 cut(s) 1191
AlwI GGATC 3 cut(s) 633, 724, 737
Aor13HI TCCGGA 1 cut(s) 357
AoxI GGCC 4 cut(s) 429, 1423, 1515, 1739
ApaLI GTGCAC 1 cut(s) 1191
ApeKI GCWGC 4 cut(s) 373, 443, 500, 1114
ApoI RAATTY 5 cut(s) 830, 1053, 1523, 1752, 1759
AspLEI GCGC 3 cut(s) 443, 864, 1114
AspS9I GGNCC 2 cut(s) 760, 1100
AsuHPI GGTGA 4 cut(s) 136, 311, 347, 725
AvaII GGWCC 2 cut(s) 760, 1100
AxyI CCTNAGG 1 cut(s) 1420
BaeGI GKGCMC 1 cut(s) 1195
BamHI GGATCC 1 cut(s) 729
BanI GGYRCC 3 cut(s) 182, 861, 1171
BanII GRGCYC 1 cut(s) 1512
BbsI GAAGAC 2 cut(s) 269, 399
Bbv12I GWGCWC 2 cut(s) 1195, 1512
BbvI GCAGC 4 cut(s) 360, 430, 487, 1126
BccI CCATC 6 cut(s) 87, 155, 224, 251, 904, 1699
BceAI ACGGC 4 cut(s) 416, 440, 813, 1726
BciT130I CCWGG 1 cut(s) 1514
BciVI GTATCC 1 cut(s) 750
BcoDI GTCTC 1 cut(s) 1145
BfaI CTAG 5 cut(s) 389, 504, 552, 1490, 1724
BfoI RGCGCY 2 cut(s) 444, 865
BfuI GTATCC 1 cut(s) 750
BisI GCNGC 5 cut(s) 374, 444, 501, 865, 1115
BlpI GCTNAGC 1 cut(s) 1653
BlsI GCNGC 5 cut(s) 375, 445, 502, 866, 1116
Bme1390I CCNGG 1 cut(s) 1514
Bme18I GGWCC 2 cut(s) 760, 1100
BmeRI GACNNNNNGTC 1 cut(s) 1261
BmgBI CACGTC 1 cut(s) 1258
BmgT120I GGNCC 2 cut(s) 760, 1100
BmiI GGNNCC 8 cut(s) 22, 98, 184, 731, 863, 1071, 1101, 1173
BmrFI CCNGG 1 cut(s) 1514
BmsI GCATC 3 cut(s) 198, 717, 1018
BpiI GAAGAC 2 cut(s) 269, 399
BpmI CTGGAG 1 cut(s) 1496
Bpu1102I GCTNAGC 1 cut(s) 1653
BpuEI CTTGAG 2 cut(s) 1624, 1679
BsaHI GRCGYC 1 cut(s) 862
BsaJI CCNNGG 6 cut(s) 331, 432, 843, 1005, 1048, 1242
BsaWI WCCGGW 1 cut(s) 357
BsaXI ACNNNNNCTCC 2 cut(s) 1142, 1172
Bsc4I CCNNNNNNNGG 5 cut(s) 17, 179, 337, 769, 1748
Bse1I ACTGG 2 cut(s) 161, 245
Bse21I CCTNAGG 1 cut(s) 1420
BseAI TCCGGA 1 cut(s) 357
BseBI CCWGG 1 cut(s) 1514
BseDI CCNNGG 6 cut(s) 331, 432, 843, 1005, 1048, 1242
BseGI GGATG 4 cut(s) 64, 147, 472, 1624
BseLI CCNNNNNNNGG 5 cut(s) 17, 179, 337, 769, 1748
BseNI ACTGG 2 cut(s) 161, 245
BseRI GAGGAG 1 cut(s) 635
BseSI GKGCMC 1 cut(s) 1195
BseXI GCAGC 4 cut(s) 360, 430, 487, 1126
BsgI GTGCAG 2 cut(s) 493, 1503
BshFI GGCC 4 cut(s) 431, 1425, 1517, 1741
BshNI GGYRCC 3 cut(s) 182, 861, 1171
BsiHKAI GWGCWC 2 cut(s) 1195, 1512
BsiSI CCGG 1 cut(s) 358
BslFI GGGAC 1 cut(s) 1113
BslI CCNNNNNNNGG 5 cut(s) 17, 179, 337, 769, 1748
BsmAI GTCTC 1 cut(s) 1145
BsmFI GGGAC 1 cut(s) 1113
BsmI GAATGC 2 cut(s) 800, 1409
BsnI GGCC 4 cut(s) 431, 1425, 1517, 1741
Bsp1286I GDGCHC 2 cut(s) 1195, 1512
Bsp13I TCCGGA 1 cut(s) 357
Bsp143I GATC 2 cut(s) 625, 729
Bsp1720I GCTNAGC 1 cut(s) 1653
Bsp19I CCATGG 2 cut(s) 331, 1048
BspACI CCGC 7 cut(s) 11, 100, 437, 610, 727, 865, 1140
BspANI GGCC 4 cut(s) 431, 1425, 1517, 1741
BspEI TCCGGA 1 cut(s) 357
BspHI TCATGA 2 cut(s) 280, 628
BspLI GGNNCC 8 cut(s) 22, 98, 184, 731, 863, 1071, 1101, 1173
BspPI GGATC 3 cut(s) 633, 724, 737
BspQI GCTCTTC 2 cut(s) 453, 1500
BspT107I GGYRCC 3 cut(s) 182, 861, 1171
BsrI ACTGG 2 cut(s) 161, 245
BssECI CCNNGG 6 cut(s) 331, 432, 843, 1005, 1048, 1242
BssMI GATC 2 cut(s) 625, 729
BssNAI GTATAC 1 cut(s) 322
BssNI GRCGYC 1 cut(s) 862
BssT1I CCWWGG 5 cut(s) 331, 843, 1005, 1048, 1242
Bst1107I GTATAC 1 cut(s) 322
Bst2UI CCWGG 1 cut(s) 1514
Bst4CI ACNGT 9 cut(s) 203, 268, 416, 637, 662, 1104, 1158, 1190, 1332
Bst6I CTCTTC 5 cut(s) 453, 1363, 1500, 1634, 1666
BstACI GRCGYC 1 cut(s) 862
BstC8I GCNNGC 3 cut(s) 439, 1176, 1180
BstDEI CTNAG 6 cut(s) 212, 566, 944, 1075, 1420, 1653
BstDSI CCRYGG 3 cut(s) 331, 432, 1048
BstF5I GGATG 4 cut(s) 64, 147, 472, 1624
BstH2I RGCGCY 2 cut(s) 444, 865
BstHHI GCGC 3 cut(s) 443, 864, 1114
BstKTI GATC 2 cut(s) 628, 732
BstMAI GTCTC 1 cut(s) 1145
BstMBI GATC 2 cut(s) 625, 729
BstMWI GCNNNNNNNGC 4 cut(s) 443, 452, 1010, 1415
BstNI CCWGG 1 cut(s) 1514
BstNSI RCATGY 1 cut(s) 1065
BstSCI CCNGG 1 cut(s) 1512
BstSLI GKGCMC 1 cut(s) 1195
BstV1I GCAGC 4 cut(s) 360, 430, 487, 1126
BstV2I GAAGAC 2 cut(s) 269, 399
BstX2I RGATCY 1 cut(s) 729
BstXI CCANNNNNNTGG 1 cut(s) 813
BstYI RGATCY 1 cut(s) 729
BstZ17I GTATAC 1 cut(s) 322
Bsu36I CCTNAGG 1 cut(s) 1420
BsuI GTATCC 1 cut(s) 750
BsuRI GGCC 4 cut(s) 431, 1425, 1517, 1741
BtgI CCRYGG 3 cut(s) 331, 432, 1048
BtrI CACGTC 1 cut(s) 1258
BtsCI GGATG 4 cut(s) 64, 147, 472, 1624
BtsI GCAGTG 2 cut(s) 481, 1020
BtsIMutI CAGTG 6 cut(s) 168, 481, 1020, 1195, 1215, 1328
Cac8I GCNNGC 3 cut(s) 439, 1176, 1180
CciI TCATGA 2 cut(s) 280, 628
CfoI GCGC 3 cut(s) 443, 864, 1114
Cfr13I GGNCC 2 cut(s) 760, 1100
Csp6I GTAC 3 cut(s) 775, 973, 1595
CviQI GTAC 3 cut(s) 775, 973, 1595
DdeI CTNAG 6 cut(s) 212, 566, 944, 1075, 1420, 1653
DinI GGCGCC 1 cut(s) 863
DpnI GATC 2 cut(s) 627, 731
DpnII GATC 2 cut(s) 625, 729
DraI TTTAAA 1 cut(s) 1399
DriI GACNNNNNGTC 1 cut(s) 1261
EaeI YGGCCR 1 cut(s) 1739
Eam1104I CTCTTC 5 cut(s) 453, 1363, 1500, 1634, 1666
Eam1105I GACNNNNNGTC 1 cut(s) 1261
EarI CTCTTC 5 cut(s) 453, 1363, 1500, 1634, 1666
EciI GGCGGA 2 cut(s) 89, 742
Ecl136II GAGCTC 1 cut(s) 1510
Eco130I CCWWGG 5 cut(s) 331, 843, 1005, 1048, 1242
Eco147I AGGCCT 1 cut(s) 1517
Eco24I GRGCYC 1 cut(s) 1512
Eco47I GGWCC 2 cut(s) 760, 1100
Eco53kI GAGCTC 1 cut(s) 1510
Eco57I CTGAAG 3 cut(s) 205, 578, 1562
Eco81I CCTNAGG 1 cut(s) 1420
EcoICRI GAGCTC 1 cut(s) 1510
EcoRI GAATTC 1 cut(s) 1752
EcoRII CCWGG 1 cut(s) 1512
EcoT14I CCWWGG 5 cut(s) 331, 843, 1005, 1048, 1242
EcoT22I ATGCAT 2 cut(s) 121, 995
EcoT38I GRGCYC 1 cut(s) 1512
EgeI GGCGCC 1 cut(s) 863
EheI GGCGCC 1 cut(s) 863
ErhI CCWWGG 5 cut(s) 331, 843, 1005, 1048, 1242
FaqI GGGAC 1 cut(s) 1113
FauI CCCGC 1 cut(s) 430
FblI GTMKAC 2 cut(s) 63, 321
Fnu4HI GCNGC 5 cut(s) 374, 444, 501, 865, 1115
FokI GGATG 4 cut(s) 71, 134, 479, 1631
FriOI GRGCYC 1 cut(s) 1512
Fsp4HI GCNGC 5 cut(s) 374, 444, 501, 865, 1115
FspBI CTAG 5 cut(s) 389, 504, 552, 1490, 1724
FspI TGCGCA 1 cut(s) 1113
GlaI GCGC 3 cut(s) 442, 863, 1113
GluI GCNGC 5 cut(s) 374, 444, 501, 865, 1115
GsuI CTGGAG 1 cut(s) 1496
HaeII RGCGCY 2 cut(s) 444, 865
HaeIII GGCC 4 cut(s) 431, 1425, 1517, 1741
HapII CCGG 1 cut(s) 358
HhaI GCGC 3 cut(s) 443, 864, 1114
Hin1I GRCGYC 1 cut(s) 862
Hin6I GCGC 3 cut(s) 441, 862, 1112
HinP1I GCGC 3 cut(s) 441, 862, 1112
HincII GTYRAC 1 cut(s) 64
HindII GTYRAC 1 cut(s) 64
HindIII AAGCTT 1 cut(s) 1655
HinfI GANTC 6 cut(s) 28, 275, 385, 538, 562, 886
HpaII CCGG 1 cut(s) 358
HphI GGTGA 4 cut(s) 136, 311, 347, 725
Hpy166II GTNNAC 8 cut(s) 64, 166, 322, 578, 775, 1166, 1193, 1266
Hpy188I TCNGA 5 cut(s) 25, 588, 697, 1204, 1758
Hpy188III TCNNGA 6 cut(s) 223, 281, 358, 389, 629, 1130
Hpy8I GTNNAC 8 cut(s) 64, 166, 322, 578, 775, 1166, 1193, 1266
HpyAV CCTTC 9 cut(s) 457, 517, 583, 691, 1075, 1085, 1232, 1528, 1685
HpyCH4III ACNGT 9 cut(s) 203, 268, 416, 637, 662, 1104, 1158, 1190, 1332
HpyCH4IV ACGT 1 cut(s) 1257
HpyCH4V TGCA 9 cut(s) 49, 119, 474, 993, 1013, 1031, 1061, 1193, 1484
HpyF10VI GCNNNNNNNGC 4 cut(s) 443, 452, 1010, 1415
HpyF3I CTNAG 6 cut(s) 212, 566, 944, 1075, 1420, 1653
HpySE526I ACGT 1 cut(s) 1257
Hsp92I GRCGYC 1 cut(s) 862
HspAI GCGC 3 cut(s) 441, 862, 1112
KasI GGCGCC 1 cut(s) 861
Kpn2I TCCGGA 1 cut(s) 357
Kzo9I GATC 2 cut(s) 625, 729
LguI GCTCTTC 2 cut(s) 453, 1500
LmnI GCTCC 3 cut(s) 102, 487, 1515
Lsp1109I GCAGC 4 cut(s) 360, 430, 487, 1126
LweI GCATC 3 cut(s) 198, 717, 1018
MaeI CTAG 5 cut(s) 389, 504, 552, 1490, 1724
MaeII ACGT 1 cut(s) 1257
MaeIII GTNAC 2 cut(s) 637, 1352
MalI GATC 2 cut(s) 627, 731
MboI GATC 2 cut(s) 625, 729
MfeI CAATTG 1 cut(s) 1145
MflI RGATCY 1 cut(s) 729
MhlI GDGCHC 2 cut(s) 1195, 1512
Mly113I GGCGCC 1 cut(s) 862
MlyI GAGTC 1 cut(s) 379
Mph1103I ATGCAT 2 cut(s) 121, 995
MroI TCCGGA 1 cut(s) 357
MseI TTAA 7 cut(s) 657, 839, 849, 1251, 1368, 1398, 1458
MslI CAYNNNNRTG 3 cut(s) 71, 414, 646
MspA1I CMGCKG 1 cut(s) 1274
MspI CCGG 1 cut(s) 358
MspR9I CCNGG 1 cut(s) 1514
MunI CAATTG 1 cut(s) 1145
Mva1269I GAATGC 2 cut(s) 800, 1409
MvaI CCWGG 1 cut(s) 1514
MwoI GCNNNNNNNGC 4 cut(s) 443, 452, 1010, 1415
NarI GGCGCC 1 cut(s) 862
NcoI CCATGG 2 cut(s) 331, 1048
NdeII GATC 2 cut(s) 625, 729
NlaIV GGNNCC 8 cut(s) 22, 98, 184, 731, 863, 1071, 1101, 1173
NmeAIII GCCGAG 1 cut(s) 1451
NmuCI GTSAC 2 cut(s) 637, 1352
NsbI TGCGCA 1 cut(s) 1113
NsiI ATGCAT 2 cut(s) 121, 995
NspI RCATGY 1 cut(s) 1065
PagI TCATGA 2 cut(s) 280, 628
PceI AGGCCT 1 cut(s) 1517
PciSI GCTCTTC 2 cut(s) 453, 1500
PctI GAATGC 2 cut(s) 800, 1409
PfeI GAWTC 5 cut(s) 28, 275, 538, 562, 886
PkrI GCNGC 5 cut(s) 375, 445, 502, 866, 1116
PleI GAGTC 1 cut(s) 379
PluTI GGCGCC 1 cut(s) 865
PpsI GAGTC 1 cut(s) 379
Psp124BI GAGCTC 1 cut(s) 1512
Psp6I CCWGG 1 cut(s) 1512
PspGI CCWGG 1 cut(s) 1512
PspN4I GGNNCC 8 cut(s) 22, 98, 184, 731, 863, 1071, 1101, 1173
PspPI GGNCC 2 cut(s) 760, 1100
PsuI RGATCY 1 cut(s) 729
PvuII CAGCTG 1 cut(s) 1274
RsaI GTAC 3 cut(s) 776, 974, 1596
RsaNI GTAC 3 cut(s) 775, 973, 1595
RseI CAYNNNNRTG 3 cut(s) 71, 414, 646
SacI GAGCTC 1 cut(s) 1512
SalI GTCGAC 1 cut(s) 62
SapI GCTCTTC 2 cut(s) 453, 1500
SaqAI TTAA 7 cut(s) 657, 839, 849, 1251, 1368, 1398, 1458
SatI GCNGC 5 cut(s) 374, 444, 501, 865, 1115
Sau3AI GATC 2 cut(s) 625, 729
Sau96I GGNCC 2 cut(s) 760, 1100
SchI GAGTC 1 cut(s) 379
ScrFI CCNGG 1 cut(s) 1514
SduI GDGCHC 2 cut(s) 1195, 1512
SfaNI GCATC 3 cut(s) 198, 717, 1018
SfoI GGCGCC 1 cut(s) 863
SinI GGWCC 2 cut(s) 760, 1100
SmiMI CAYNNNNRTG 3 cut(s) 71, 414, 646
SmlI CTYRAG 2 cut(s) 1603, 1658
SmoI CTYRAG 2 cut(s) 1603, 1658
SseBI AGGCCT 1 cut(s) 1517
SsiI CCGC 7 cut(s) 11, 100, 437, 610, 727, 865, 1140
SspDI GGCGCC 1 cut(s) 861
SspMI CTAG 5 cut(s) 389, 504, 552, 1490, 1724
SstI GAGCTC 1 cut(s) 1512
StuI AGGCCT 1 cut(s) 1517
StyD4I CCNGG 1 cut(s) 1512
StyI CCWWGG 5 cut(s) 331, 843, 1005, 1048, 1242
TaaI ACNGT 9 cut(s) 203, 268, 416, 637, 662, 1104, 1158, 1190, 1332
TaiI ACGT 1 cut(s) 1260
TaqI TCGA 2 cut(s) 63, 1689
TatI WGTACW 2 cut(s) 774, 1594
TauI GCSGC 1 cut(s) 867
TfiI GAWTC 5 cut(s) 28, 275, 538, 562, 886
Tru1I TTAA 7 cut(s) 657, 839, 849, 1251, 1368, 1398, 1458
Tru9I TTAA 7 cut(s) 657, 839, 849, 1251, 1368, 1398, 1458
TscAI CASTG 6 cut(s) 168, 481, 1020, 1195, 1222, 1335
TseFI GTSAC 2 cut(s) 637, 1352
TseI GCWGC 4 cut(s) 373, 443, 500, 1114
Tsp45I GTSAC 2 cut(s) 637, 1352
TspRI CASTG 6 cut(s) 168, 481, 1020, 1195, 1222, 1335
VneI GTGCAC 1 cut(s) 1191
VpaK11BI GGWCC 2 cut(s) 760, 1100
XapI RAATTY 5 cut(s) 830, 1053, 1523, 1752, 1759
XbaI TCTAGA 1 cut(s) 388
XceI RCATGY 1 cut(s) 1065
XmiI GTMKAC 2 cut(s) 63, 321
XspI CTAG 5 cut(s) 389, 504, 552, 1490, 1724
Zsp2I ATGCAT 2 cut(s) 121, 995
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.