protein modification by small protein conjugation or removal
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 387 |
| AciI | CCGC | 3 cut(s) | 423, 604, 623 |
| AcsI | RAATTY | 5 cut(s) | 212, 275, 397, 803, 846 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 858 |
| AflIII | ACRYGT | 1 cut(s) | 147 |
| AgsI | TTSAA | 8 cut(s) | 383, 404, 547, 568, 659, 829, 937, 1049 |
| AjnI | CCWGG | 2 cut(s) | 305, 474 |
| AluBI | AGCT | 5 cut(s) | 619, 838, 928, 946, 1024 |
| AluI | AGCT | 5 cut(s) | 619, 838, 928, 946, 1024 |
| Alw21I | GWGCWC | 1 cut(s) | 525 |
| Alw26I | GTCTC | 3 cut(s) | 446, 891, 999 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 986 |
| Ama87I | CYCGRG | 2 cut(s) | 888, 902 |
| AoxI | GGCC | 1 cut(s) | 1065 |
| ApoI | RAATTY | 5 cut(s) | 212, 275, 397, 803, 846 |
| AspS9I | GGNCC | 1 cut(s) | 892 |
| AsuHPI | GGTGA | 1 cut(s) | 655 |
| AsuNHI | GCTAGC | 1 cut(s) | 619 |
| AvaI | CYCGRG | 2 cut(s) | 888, 902 |
| AvaII | GGWCC | 1 cut(s) | 892 |
| Bbv12I | GWGCWC | 1 cut(s) | 525 |
| BccI | CCATC | 7 cut(s) | 189, 407, 628, 793, 875, 983, 1076 |
| BciT130I | CCWGG | 2 cut(s) | 307, 476 |
| BciVI | GTATCC | 1 cut(s) | 323 |
| BclI | TGATCA | 1 cut(s) | 142 |
| BcoDI | GTCTC | 3 cut(s) | 446, 891, 999 |
| BfaI | CTAG | 3 cut(s) | 302, 620, 998 |
| BfmI | CTRYAG | 1 cut(s) | 253 |
| BfuI | GTATCC | 1 cut(s) | 323 |
| BglII | AGATCT | 1 cut(s) | 1036 |
| Bme1390I | CCNGG | 2 cut(s) | 307, 476 |
| Bme18I | GGWCC | 1 cut(s) | 892 |
| BmeT110I | CYCGRG | 2 cut(s) | 888, 902 |
| BmgT120I | GGNCC | 1 cut(s) | 892 |
| BmiI | GGNNCC | 3 cut(s) | 104, 472, 893 |
| BmrFI | CCNGG | 2 cut(s) | 307, 476 |
| BmrI | ACTGGG | 1 cut(s) | 649 |
| BmsI | GCATC | 3 cut(s) | 83, 865, 973 |
| BmtI | GCTAGC | 1 cut(s) | 623 |
| BmuI | ACTGGG | 1 cut(s) | 649 |
| BpuEI | CTTGAG | 4 cut(s) | 767, 812, 968, 1040 |
| BsaI | GGTCTC | 2 cut(s) | 891, 999 |
| BsaJI | CCNNGG | 6 cut(s) | 183, 306, 474, 669, 711, 960 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 858 |
| Bse1I | ACTGG | 1 cut(s) | 644 |
| BseBI | CCWGG | 2 cut(s) | 307, 476 |
| BseDI | CCNNGG | 6 cut(s) | 183, 306, 474, 669, 711, 960 |
| BseGI | GGATG | 4 cut(s) | 98, 200, 418, 804 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 858 |
| BseMII | CTCAG | 1 cut(s) | 503 |
| BseNI | ACTGG | 1 cut(s) | 644 |
| BseRI | GAGGAG | 3 cut(s) | 458, 461, 464 |
| BshFI | GGCC | 1 cut(s) | 1067 |
| BsiHKAI | GWGCWC | 1 cut(s) | 525 |
| BsiHKCI | CYCGRG | 2 cut(s) | 888, 902 |
| BslFI | GGGAC | 1 cut(s) | 138 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 858 |
| BsmAI | GTCTC | 3 cut(s) | 446, 891, 999 |
| BsmFI | GGGAC | 1 cut(s) | 138 |
| BsmI | GAATGC | 1 cut(s) | 77 |
| BsnI | GGCC | 1 cut(s) | 1067 |
| Bso31I | GGTCTC | 2 cut(s) | 891, 999 |
| BsoBI | CYCGRG | 2 cut(s) | 888, 902 |
| Bsp1286I | GDGCHC | 1 cut(s) | 525 |
| Bsp143I | GATC | 3 cut(s) | 142, 257, 1036 |
| BspACI | CCGC | 3 cut(s) | 423, 604, 623 |
| BspANI | GGCC | 1 cut(s) | 1067 |
| BspCNI | CTCAG | 1 cut(s) | 502 |
| BspLI | GGNNCC | 3 cut(s) | 104, 472, 893 |
| BspOI | GCTAGC | 1 cut(s) | 623 |
| BspTNI | GGTCTC | 2 cut(s) | 891, 999 |
| BsrI | ACTGG | 1 cut(s) | 644 |
| BssECI | CCNNGG | 6 cut(s) | 183, 306, 474, 669, 711, 960 |
| BssMI | GATC | 3 cut(s) | 142, 257, 1036 |
| BssT1I | CCWWGG | 3 cut(s) | 183, 669, 711 |
| Bst2UI | CCWGG | 2 cut(s) | 307, 476 |
| Bst4CI | ACNGT | 2 cut(s) | 457, 824 |
| Bst6I | CTCTTC | 1 cut(s) | 534 |
| BstC8I | GCNNGC | 1 cut(s) | 621 |
| BstDEI | CTNAG | 5 cut(s) | 72, 332, 489, 590, 853 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 856 |
| BstF5I | GGATG | 4 cut(s) | 98, 200, 418, 804 |
| BstKTI | GATC | 3 cut(s) | 145, 260, 1039 |
| BstMAI | GTCTC | 3 cut(s) | 446, 891, 999 |
| BstMBI | GATC | 3 cut(s) | 142, 257, 1036 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 74 |
| BstNI | CCWGG | 2 cut(s) | 307, 476 |
| BstNSI | RCATGY | 1 cut(s) | 151 |
| BstSCI | CCNGG | 2 cut(s) | 305, 474 |
| BstSFI | CTRYAG | 1 cut(s) | 253 |
| BstX2I | RGATCY | 1 cut(s) | 1036 |
| BstYI | RGATCY | 1 cut(s) | 1036 |
| BsuI | GTATCC | 1 cut(s) | 323 |
| BsuRI | GGCC | 1 cut(s) | 1067 |
| BtsCI | GGATG | 4 cut(s) | 98, 200, 418, 804 |
| BtsI | GCAGTG | 1 cut(s) | 414 |
| BtsIMutI | CAGTG | 1 cut(s) | 414 |
| Cac8I | GCNNGC | 1 cut(s) | 621 |
| CaiI | CAGNNNCTG | 1 cut(s) | 986 |
| Cfr13I | GGNCC | 1 cut(s) | 892 |
| CseI | GACGC | 1 cut(s) | 57 |
| CviAII | CATG | 2 cut(s) | 148, 580 |
| DdeI | CTNAG | 5 cut(s) | 72, 332, 489, 590, 853 |
| DpnI | GATC | 3 cut(s) | 144, 259, 1038 |
| DpnII | GATC | 3 cut(s) | 142, 257, 1036 |
| Eam1104I | CTCTTC | 1 cut(s) | 534 |
| EarI | CTCTTC | 1 cut(s) | 534 |
| EciI | GGCGGA | 1 cut(s) | 438 |
| Eco130I | CCWWGG | 3 cut(s) | 183, 669, 711 |
| Eco31I | GGTCTC | 2 cut(s) | 891, 999 |
| Eco47I | GGWCC | 1 cut(s) | 892 |
| Eco88I | CYCGRG | 2 cut(s) | 888, 902 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 856 |
| EcoRI | GAATTC | 1 cut(s) | 275 |
| EcoRII | CCWGG | 2 cut(s) | 305, 474 |
| EcoT14I | CCWWGG | 3 cut(s) | 183, 669, 711 |
| ErhI | CCWWGG | 3 cut(s) | 183, 669, 711 |
| FaeI | CATG | 2 cut(s) | 151, 583 |
| FaiI | YATR | 6 cut(s) | 149, 483, 581, 750, 871, 873 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 583, 615 |
| FaqI | GGGAC | 1 cut(s) | 138 |
| FatI | CATG | 2 cut(s) | 147, 579 |
| FauNDI | CATATG | 1 cut(s) | 871 |
| FbaI | TGATCA | 1 cut(s) | 142 |
| FblI | GTMKAC | 1 cut(s) | 387 |
| FokI | GGATG | 4 cut(s) | 105, 207, 425, 811 |
| FspBI | CTAG | 3 cut(s) | 302, 620, 998 |
| HaeIII | GGCC | 1 cut(s) | 1067 |
| HgaI | GACGC | 1 cut(s) | 57 |
| Hin1II | CATG | 2 cut(s) | 151, 583 |
| HindIII | AAGCTT | 2 cut(s) | 836, 944 |
| HinfI | GANTC | 7 cut(s) | 7, 130, 236, 787, 809, 912, 1015 |
| HphI | GGTGA | 1 cut(s) | 655 |
| Hpy166II | GTNNAC | 2 cut(s) | 388, 1054 |
| Hpy188I | TCNGA | 6 cut(s) | 49, 120, 241, 317, 964, 1036 |
| Hpy188III | TCNNGA | 7 cut(s) | 82, 460, 568, 784, 791, 998, 1019 |
| Hpy8I | GTNNAC | 2 cut(s) | 388, 1054 |
| HpyAV | CCTTC | 5 cut(s) | 115, 358, 413, 433, 1057 |
| HpyCH4III | ACNGT | 2 cut(s) | 457, 824 |
| HpyCH4V | TGCA | 2 cut(s) | 170, 536 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 74 |
| HpyF3I | CTNAG | 5 cut(s) | 72, 332, 489, 590, 853 |
| Hsp92II | CATG | 2 cut(s) | 151, 583 |
| Ksp22I | TGATCA | 1 cut(s) | 142 |
| Kzo9I | GATC | 3 cut(s) | 142, 257, 1036 |
| LmnI | GCTCC | 1 cut(s) | 760 |
| LpnPI | CCDG | 9 cut(s) | 281, 292, 319, 461, 476, 488, 540, 625, 908 |
| LweI | GCATC | 3 cut(s) | 83, 865, 973 |
| MaeI | CTAG | 3 cut(s) | 302, 620, 998 |
| MaeIII | GTNAC | 1 cut(s) | 493 |
| MalI | GATC | 3 cut(s) | 144, 259, 1038 |
| MboI | GATC | 3 cut(s) | 142, 257, 1036 |
| MboII | GAAGA | 9 cut(s) | 64, 551, 671, 874, 979, 982, 985, 1024, 1065 |
| MflI | RGATCY | 1 cut(s) | 1036 |
| MhlI | GDGCHC | 1 cut(s) | 525 |
| MluCI | AATT | 6 cut(s) | 212, 275, 397, 531, 803, 846 |
| MlyI | GAGTC | 3 cut(s) | 139, 803, 921 |
| MmeI | TCCRAC | 1 cut(s) | 798 |
| MseI | TTAA | 1 cut(s) | 135 |
| MspR9I | CCNGG | 2 cut(s) | 307, 476 |
| Mva1269I | GAATGC | 1 cut(s) | 77 |
| MvaI | CCWGG | 2 cut(s) | 307, 476 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 74 |
| NdeI | CATATG | 1 cut(s) | 871 |
| NdeII | GATC | 3 cut(s) | 142, 257, 1036 |
| NheI | GCTAGC | 1 cut(s) | 619 |
| NlaIII | CATG | 2 cut(s) | 151, 583 |
| NlaIV | GGNNCC | 3 cut(s) | 104, 472, 893 |
| NspI | RCATGY | 1 cut(s) | 151 |
| PaeR7I | CTCGAG | 1 cut(s) | 902 |
| PciI | ACATGT | 1 cut(s) | 147 |
| PctI | GAATGC | 1 cut(s) | 77 |
| PfeI | GAWTC | 4 cut(s) | 7, 236, 787, 1015 |
| PflFI | GACNNNGTC | 1 cut(s) | 129 |
| PleI | GAGTC | 3 cut(s) | 138, 803, 920 |
| PpsI | GAGTC | 3 cut(s) | 138, 803, 920 |
| PscI | ACATGT | 1 cut(s) | 147 |
| Psp6I | CCWGG | 2 cut(s) | 305, 474 |
| PspGI | CCWGG | 2 cut(s) | 305, 474 |
| PspN4I | GGNNCC | 3 cut(s) | 104, 472, 893 |
| PspPI | GGNCC | 1 cut(s) | 892 |
| PspXI | VCTCGAGB | 1 cut(s) | 902 |
| PstNI | CAGNNNCTG | 1 cut(s) | 986 |
| PsuI | RGATCY | 1 cut(s) | 1036 |
| PsyI | GACNNNGTC | 1 cut(s) | 129 |
| SaqAI | TTAA | 1 cut(s) | 135 |
| Sau3AI | GATC | 3 cut(s) | 142, 257, 1036 |
| Sau96I | GGNCC | 1 cut(s) | 892 |
| SchI | GAGTC | 3 cut(s) | 139, 803, 921 |
| ScrFI | CCNGG | 2 cut(s) | 307, 476 |
| SduI | GDGCHC | 1 cut(s) | 525 |
| SfaNI | GCATC | 3 cut(s) | 83, 865, 973 |
| SfcI | CTRYAG | 1 cut(s) | 253 |
| Sfr274I | CTCGAG | 1 cut(s) | 902 |
| SinI | GGWCC | 1 cut(s) | 892 |
| SlaI | CTCGAG | 1 cut(s) | 902 |
| SmlI | CTYRAG | 5 cut(s) | 782, 791, 902, 947, 1019 |
| SmoI | CTYRAG | 5 cut(s) | 782, 791, 902, 947, 1019 |
| Sse9I | AATT | 6 cut(s) | 212, 275, 397, 531, 803, 846 |
| SsiI | CCGC | 3 cut(s) | 423, 604, 623 |
| SspMI | CTAG | 3 cut(s) | 302, 620, 998 |
| StyD4I | CCNGG | 2 cut(s) | 305, 474 |
| StyI | CCWWGG | 3 cut(s) | 183, 669, 711 |
| TaaI | ACNGT | 2 cut(s) | 457, 824 |
| TaqI | TCGA | 3 cut(s) | 459, 771, 903 |
| TasI | AATT | 6 cut(s) | 212, 275, 397, 531, 803, 846 |
| TfiI | GAWTC | 4 cut(s) | 7, 236, 787, 1015 |
| Tru1I | TTAA | 1 cut(s) | 135 |
| Tru9I | TTAA | 1 cut(s) | 135 |
| TscAI | CASTG | 1 cut(s) | 414 |
| TspDTI | ATGAA | 4 cut(s) | 249, 596, 768, 858 |
| TspGWI | ACGGA | 2 cut(s) | 154, 217 |
| TspRI | CASTG | 1 cut(s) | 414 |
| Tth111I | GACNNNGTC | 1 cut(s) | 129 |
| VpaK11BI | GGWCC | 1 cut(s) | 892 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 856 |
| XapI | RAATTY | 5 cut(s) | 212, 275, 397, 803, 846 |
| XbaI | TCTAGA | 1 cut(s) | 997 |
| XceI | RCATGY | 1 cut(s) | 151 |
| XhoI | CTCGAG | 1 cut(s) | 902 |
| XmiI | GTMKAC | 1 cut(s) | 387 |
| XspI | CTAG | 3 cut(s) | 302, 620, 998 |