Rorug07G0009800

50S ribosomal protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
809778 .. 814508
4731 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0009800.1

Sequence Viewer

Length: 2382 bp
ATGGATTGGGATTCTCAGCTCAGTCCTGCTACTTCCTCTAATCAGTTCAAGGATACATGGAAGCATACACTTCTTTTGTCATTTCAGAGCTTTGGAGTGATATATGGTCAAATGAGTACTGCTCCCTTATATGTCTTTGGGACAATTCATGCACAAGATATCAAATCGGAGGATACAGTTTATGAACTATTCTCCTTCATTTTCTGGACTATGACCATCATTTCTTTACTGAAGTATGCCTGTATAGTATTAAGAGCTGATGATAATGGAGAAGGTGGTACTTTTGCTCTGTACTCACTCTTGTGTAGGCATGCCAAAGTGGGTCTGCTTCCAAATGACAGAAGTGCTGATGAGGTTATGCATTATGAGAGGGAAATTCCTTTCACGATGAAGGTGGAATCGAGGGCTAAAAGAACCATTGAAAAACATAAAAGTAGTCACTATGTCATGTTGGTCCTGGCTCTGTTAGGTTCCTGCATGACAATCGGCGTTGGGGTGCTTACCCCAGCTCTTTCGGTCTATTCAGCTTCATCAGGTGTTCAAAGATCACTGTCAGGCATGGCCCACCGATTTTCATCTTCGGAAAGGAAACAAGAGTCAATAGCAAAAGCTTTCAAGGATTATGTACCAGTTCCCTTGGCATCTGCTATATTGGTGTGCCTCTTCATGCTGCAGCATTGTGGGACTCGTAAAATTGGGTTTATGTTTGCTCCGATTATCATTATTTGGCTGATATGTATCGGTGGCGTGGGTATATATAATATTTTCTACTGGGACAAACAAATTGTCCATGCAATCTCTCCTGTATACATGTACAGATTTGTTAGGAACATTAACGTTGACCGTTGGAGGGCATTAGGCAGCATAGTTCTATGTGTAGCAGGGTCAGAGGCAATGTTTGCAGATCTAGGTCATTTCAGAAAGAAATCCATCAAGATTATATTTGTATGCTTGATCTATCCTGTTCTTGTTCTATGCTATGCCGGTCAGGCTGCATTTATCTCCAAAAACTTTCATGAGGATGATTACAATCATCTCAGTGAATCCTTTCCTACACCAGTTCGCGACTGGTTCATAGCATTATCCCTACTTGCTTCAGCTGTAGGAAGTCAAGCTACCATAACAGCCAGTTTCTCCATCATAAATCAGTGCCTGGCACTTGGTTGTTTTCCCAGAGTAAAAGTTATTCATACATCAGATAAGATACATGGGCAGGTTTATATTCCCGATATCAACTGGATATTGATGGTTCTATGCCTTACTGTTACAATTGGTTTTCATGATATTGAGAAAATTGGCAATGCCACAGGTTTGGCCATAATTTCTCCAATGGTTGTCACAACTTGTCTCATGTCACTGGTAATTGCCTTATACTGGGAGAAGAGTTTGTATCAATCTATCTGTTTTCTACTGTTCTTCGGCTTCATTGAGGCGATGTATGTGTCAGCTTGTATGTTGAATGTCCATAAGGGAGCTTGGTATTTGGTTTTCCTATTGGCATTGTCTTTGACTATCATGATTTCATGGCATTATGGAACCAAAAAGAAGCTCGAATTCGATTTAACAAACAAGGTGTCTGCAGAATGGCTCACAGCTATTAGCCCAGCACTAGGAGTTACCAGGGTACCTGGCATTGGTTTCATTTATACTGATATAGTCTCAGGAATTCCGGCTTTCTTCTCACACTTCATTACGAATCTTCCTGCATTTCATCAAGTTTTGATCTTTGTGTCCTTCAAGTCTCTACCAGTTCCATATGTCCCTGCAACTCGGAGGTACCTTGTGGGAAGGATCGGGCCAAAAGATCTTAAAATATATCGTTGTGTGGTGAGATATGGATATTGTGAGCATATTAGGGACACCGATGATTTTGAGGAAGAGATTATTGGTTCCATTGGAGAATTCATTTCCGTGGAAGAAAATGACTTTGATTCCCTGAATTCATCACAAGATAGAATGATCATAGTTGGCAAGCCACCATCAAATGGAAGTGCTTTGATTCCTTTAAATGAGATCACCTCATATGAGGACTCCGTGAGCTTGGTGCACAATGAAACCCGGTTAAGTACATTGGCCGATGCATGTGAGAGTGGTATGGTTTCGGTGCAGAGAAAAAAGGTCCGGTTCATGTTGCCTCCTAATAGTCCTAAGATGCGAGTATCTGTTAGGGAGGAGCTCCAAGAACTGATTGATGCTAGGGAGAGTGGTACTGCATATTTCTTGGGTCAGGTGCATTTGGCAGTTCGCGAAGGCTCAAACATATTCAAGCGGTTACTGATCATGACCTATGTTTTGAGTGAGAAGAATTGCAGAGAGCCTCCAGTTGCACTCAACATTCCTCATGCTGCTCTTGTTGAGGTTGGTATGGTCTGTAGCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

793

Amino Acids

88.84

Weight (kDa)

7.78

Isoelectric Point (pI)

41.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
K_trans PF02705 27 - 531 4e-133 K+ potassium transporter integral membrane domain
K_trans_C PF22776 547 - 793 2.6e-23 K+ potassium transporter C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000025)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31370 AT1G31380 AT1G31390 AT1G31400 AT2G01790 AT2G05400 AT2G05400 AT2G05400 AT2G05410 AT2G05410 AT2G05420 AT2G05430 AT2G42455 AT2G42460 AT2G42465 AT2G42470 AT2G42475 AT2G42480 AT3G27040 AT3G29580 AT3G44790 AT3G44800 AT3G44805 AT3G58200 AT3G58210 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58230 AT3G58240 AT3G58250 AT3G58260 AT3G58270 AT3G58270 AT3G58270 AT3G58280 AT3G58290 AT3G58290 AT3G58290 AT3G58300 AT3G58320 AT3G58330 AT3G58340 AT3G58340 AT3G58350 AT3G58350 AT3G58360 AT3G58370 AT3G58380 AT3G58400 AT3G58410 AT3G58410 AT3G58430 AT3G58430 AT3G58440 AT5G03550
fragaria_vesca FvH4_2g00084 FvH4_2g15701 FvH4_2g24334 FvH4_3g23322 FvH4_3g23322 FvH4_3g23322 FvH4_3g23482 FvH4_3g23482 FvH4_3g23482 FvH4_3g23491 FvH4_3g23492 FvH4_3g23510 FvH4_3g23520 FvH4_3g23520 FvH4_3g23520 FvH4_3g23580 FvH4_3g38842 FvH4_4g10396 FvH4_5g29370 FvH4_5g32130 FvH4_7g04570 FvH4_7g04571 FvH4_7g04741 FvH4_7g04741 FvH4_7g04750 FvH4_7g04750 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04770 FvH4_7g04770 FvH4_7g04770
malus_domestica MD00G1065000.v1.1 MD00G1065300.v1.1 MD02G1267400.v1.1 MD02G1267600.v1.1 MD02G1267700.v1.1 MD02G1267800.v1.1 MD02G1268100.v1.1 MD02G1268300.v1.1 MD02G1268400.v1.1 MD02G1268500.v1.1 MD03G1193600.v1.1 MD05G1071400.v1.1 MD07G1051000.v1.1 MD07G1051100.v1.1 MD07G1051200.v1.1 MD07G1051300.v1.1 MD07G1051500.v1.1 MD07G1051700.v1.1 MD07G1051800.v1.1 MD07G1085400.v1.1 MD07G1085500.v1.1 MD11G1177200.v1.1 MD11G1209800.v1.1 MD11G1209900.v1.1 MD11G1210000.v1.1 MD12G1048100.v1.1 MD12G1048600.v1.1 MD14G1046700.v1.1 MD14G1047400.v1.1
prunus_persica Prupe.2G051200_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052700_v2.0.a1 Prupe.2G052800_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G053100_v2.0.a1 Prupe.2G053300_v2.0.a1 Prupe.2G054800_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.4G223300_v2.0.a1 Prupe.4G223300_v2.0.a1
pyrus_communis pycom01g04720 pycom02g22950 pycom02g22960 pycom02g22970 pycom02g22990 pycom02g23000 pycom02g23010 pycom03g14600 pycom03g14610 pycom05g06150 pycom07g03820 pycom07g03830 pycom07g03850 pycom07g03860 pycom07g03880 pycom07g03890 pycom07g03900 pycom07g04000 pycom07g04010 pycom11g18540 pycom11g18560 pycom12g04190 pycom17g19100
rosa_chinensis RchiOBHm_Chr0c19g0500051 RchiOBHm_Chr1g0330011 RchiOBHm_Chr1g0330031 RchiOBHm_Chr1g0330041 RchiOBHm_Chr1g0330121 RchiOBHm_Chr1g0330141 RchiOBHm_Chr1g0330151 RchiOBHm_Chr1g0330181 RchiOBHm_Chr1g0330191 RchiOBHm_Chr1g0330201 RchiOBHm_Chr1g0330211 RchiOBHm_Chr1g0330221 RchiOBHm_Chr1g0367471 RchiOBHm_Chr2g0113311 RchiOBHm_Chr2g0148281 RchiOBHm_Chr4g0400061 RchiOBHm_Chr4g0437571 RchiOBHm_Chr5g0041361 RchiOBHm_Chr5g0041421 RchiOBHm_Chr5g0041481 RchiOBHm_Chr5g0041491 RchiOBHm_Chr5g0041501 RchiOBHm_Chr5g0041511 RchiOBHm_Chr5g0042491 RchiOBHm_Chr5g0042501 RchiOBHm_Chr6g0263551 RchiOBHm_Chr6g0286221 RchiOBHm_Chr7g0228171 RchiOBHm_Chr7g0231391 RchiOBHm_Chr7g0231401
rosa_laevigata RLG00000000870 RLG00000001420 RLG00000001582 RLG00000001602 RLG00000001700 RLG00000002476 RLG00000005787 RLG00000007689 RLG00000008446 RLG00000008811 RLG00000008812 RLG00000009013 RLG00000009942 RLG00000012752 RLG00000013511 RLG00000014053 RLG00000015257 RLG00000015258 RLG00000016149 RLG00000016691 RLG00000018661 RLG00000018662 RLG00000020991 RLG00000020992 RLG00000020993 RLG00000027309 RLG00000028568 RLG00000029119 RLG00000029371 RLG00000029563 RLG00000029818 RLG00000029819 RLG00000029821 RLG00000029822 RLG00000029824 RLG00000029827 RLG00000029828 RLG00000029829 RLG00000029841 RLG00000029843 RLG00000032676 RLG00000033366 RLG00000033367 RLG00000034023 RLG00000034066 RLG00000034072 RLG00000034073 RLG00000034074 RLG00000034130 RLG00000034133 RLG00000035487 RLG00000035488 RLG00000035793
rosa_multiflora Rmu_co8241405.1_g000001 Rmu_co8251033.1_g000001 Rmu_co8297611.1_g000001 Rmu_co8346639.1_g000001 Rmu_co8405917.1_g000001 Rmu_sc0000045.1_g000044 Rmu_sc0000061.1_g000032 Rmu_sc0000068.1_g000021 Rmu_sc0000068.1_g000022 Rmu_sc0000415.1_g000001 Rmu_sc0000499.1_g000003 Rmu_sc0000594.1_g000020 Rmu_sc0000673.1_g000007 Rmu_sc0000908.1_g000004 Rmu_sc0001123.1_g000013 Rmu_sc0001123.1_g000014 Rmu_sc0001167.1_g000026 Rmu_sc0001598.1_g000011 Rmu_sc0001696.1_g000003 Rmu_sc0001696.1_g000011 Rmu_sc0001696.1_g000019 Rmu_sc0001696.1_g000020 Rmu_sc0003007.1_g000016 Rmu_sc0003007.1_g000029 Rmu_sc0003051.1_g000010 Rmu_sc0003396.1_g000029 Rmu_sc0004798.1_g000020 Rmu_sc0005375.1_g000016 Rmu_sc0005375.1_g000017 Rmu_sc0005659.1_g000033 Rmu_sc0005659.1_g000034 Rmu_sc0006311.1_g000011 Rmu_sc0008249.1_g000002 Rmu_sc0008249.1_g000018 Rmu_sc0008600.1_g000014 Rmu_sc0009365.1_g000010 Rmu_sc0009365.1_g000022 Rmu_sc0009365.1_g000025 Rmu_sc0011112.1_g000008 Rmu_sc0011112.1_g000009 Rmu_sc0012031.1_g000020 Rmu_sc0013350.1_g000014 Rmu_sc0020359.1_g000004 Rmu_sc0021997.1_g000003 Rmu_sc0021997.1_g000004 Rmu_sc0023610.1_g000002 Rmu_sc0023611.1_g000001 Rmu_sc0028894.1_g000001 Rmu_sc0031050.1_g000001 Rmu_sc0041109.1_g000001 Rmu_ssc0000087.1_g000050 Rmu_ssc0000087.1_g000051 Rmu_ssc0000087.1_g000052 Rmu_ssc0000295.1_g000058 Rmu_ssc0000343.1_g000031 Rmu_ssc0000423.1_g000015 Rmu_ssc0000470.1_g000005 Rmu_ssc0000470.1_g000006
rosa_roxburghii Rroxscaffold_1G00005900 Rroxscaffold_1G00005910 Rroxscaffold_1G00012600 Rroxscaffold_1G00016860 Rroxscaffold_1G00032110 Rroxscaffold_1G00038140 Rroxscaffold_1G00038200 Rroxscaffold_1G00039020 Rroxscaffold_1G00039030 Rroxscaffold_1G00039080 Rroxscaffold_1G00039090 Rroxscaffold_1G00039270 Rroxscaffold_2G00097120 Rroxscaffold_2G00097130 Rroxscaffold_2G00137700 Rroxscaffold_2G00151740 Rroxscaffold_2G00151750 Rroxscaffold_3G00224160 Rroxscaffold_3G00224170 Rroxscaffold_3G00226080 Rroxscaffold_3G00226090 Rroxscaffold_3G00229350 Rroxscaffold_3G00231340 Rroxscaffold_4G00291390 Rroxscaffold_4G00316220 Rroxscaffold_4G00316230 Rroxscaffold_4G00320040 Rroxscaffold_4G00320050 Rroxscaffold_4G00320120 Rroxscaffold_4G00320140 Rroxscaffold_4G00320180 Rroxscaffold_4G00320270 Rroxscaffold_4G00320280 Rroxscaffold_4G00320290 Rroxscaffold_4G00320430 Rroxscaffold_4G00321910 Rroxscaffold_5G00348730 Rroxscaffold_5G00355020 Rroxscaffold_5G00355080 Rroxscaffold_5G00357490 Rroxscaffold_5G00376500 Rroxscaffold_5G00376510 Rroxscaffold_7G00179590 Rroxscaffold_7G00179600 Rroxscaffold_7G00198610
rosa_rugosa Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0086300 Rorug01G0086500 Rorug01G0087000 Rorug01G0087100 Rorug01G0087600 Rorug01G0087700 Rorug01G0087800 Rorug01G0087800 Rorug01G0302500 Rorug02G0249300 Rorug02G0249300 Rorug02G0249400 Rorug03G0189000 Rorug04G0181800 Rorug04G0283800.1 Rorug04G0283900.1 Rorug05G0043500 Rorug05G0191800 Rorug05G0191900 Rorug05G0192800 Rorug05G0192900 Rorug05G0193000 Rorug05G0201000 Rorug05G0201100 Rorug06G0173900 Rorug06G0173900 Rorug07G0009800 Rorug07G0246300.1 Rorug07G0246400
rosa_samantha Rh1AG103600 Rh1AG104800 Rh1AG105200 Rh1AG105300 Rh1AG105500 Rh1BG082000 Rh1BG082200 Rh1BG082300 Rh1BG082900 Rh1BG083000 Rh1BG083300 Rh1BG083500 Rh1BG083600 Rh1BG083800 Rh1BG083900 Rh1BG084000 Rh1BG084100 Rh1BG084200 Rh1BG092200 Rh1BG275300 Rh1CG098700 Rh1CG098800 Rh1CG100300 Rh1CG100400 Rh1CG100600 Rh1CG100900 Rh1CG101000 Rh1CG101700 Rh1DG066900 Rh1DG067000 Rh1DG106000 Rh1DG107600 Rh1DG107800 Rh1DG108100 Rh1DG108200 Rh1DG108600 Rh1DG108700 Rh1DG108900 Rh1DG109000 Rh1DG109100 Rh1DG109300 Rh1DG109400 Rh1DG109500 Rh1DG109700 Rh1DG109800 Rh1DG173900 Rh2AG270300 Rh2AG398900 Rh2CG245000 Rh2CG260700 Rh2CG278600 Rh2CG342400 Rh2CG385700 Rh3DG197200 Rh3DG197300 Rh4AG015100 Rh4BG347400 Rh4DG360400 Rh5AG278600 Rh5AG278700 Rh5AG286900 Rh5AG287000 Rh5BG282900 Rh5BG283000 Rh5BG283100 Rh5BG291400 Rh5CG314900 Rh5CG315100 Rh5CG315400 Rh5CG315700 Rh5CG315900 Rh5CG316000 Rh5CG323600 Rh5CG323700 Rh5DG291400 Rh5DG292300 Rh5DG292500 Rh5DG292700 Rh5DG292800 Rh5DG292900 Rh5DG301100 Rh5DG301200 Rh5DG301400 Rh5DG350900 Rh6BG407700 Rh6CG294900 Rh6DG286900 Rh7AG400400 Rh7AG420600 Rh7BG381700 Rh7BG395000 Rh7CG418600 Rh7CG440700 Rh7DG396500 Rh7DG413200
rosa_wichuraiana Rw1G003300 Rw1G008240 Rw1G008250 Rw1G008270 Rw1G008330 Rw1G008340 Rw1G008350 Rw1G008360 Rw1G008370 Rw1G008810 Rw1G021140 Rw3G020650 Rw5G026150 Rw5G026200 Rw5G026240 Rw5G026250 Rw5G026650 Rw5G030820 Rw7G006630 Rw7G030060 Rw7G034700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1204
Acc65I GGTACC 2 cut(s) 1624, 1776
AccB1I GGYRCC 2 cut(s) 1624, 1776
AccB7I CCANNNNNTGG 1 cut(s) 1985
AccI GTMKAC 1 cut(s) 807
AccII CGCG 2 cut(s) 1065, 2247
AciI CCGC 1 cut(s) 2269
AclI AACGTT 1 cut(s) 837
AclWI GGATC 1 cut(s) 1799
AcoI YGGCCR 2 cut(s) 1314, 2073
AcsI RAATTY 5 cut(s) 375, 1553, 1665, 1901, 1939
AcuI CTGAAG 2 cut(s) 251, 1080
AfaI GTAC 9 cut(s) 118, 280, 293, 627, 815, 1626, 1778, 2068, 2209
AfiI CCNNNNNNNGG 5 cut(s) 850, 1374, 1610, 1634, 1985
AflIII ACRYGT 1 cut(s) 810
AgsI TTSAA 7 cut(s) 49, 422, 542, 616, 1459, 1738, 2266
AjnI CCWGG 4 cut(s) 456, 1152, 1619, 1627
AjuI GAANNNNNNNTTGG 2 cut(s) 1869, 1901
AleI CACNNNNGTG 1 cut(s) 301
Alw21I GWGCWC 2 cut(s) 2049, 2178
Alw26I GTCTC 3 cut(s) 1352, 1663, 1746
Alw44I GTGCAC 1 cut(s) 2045
AlwI GGATC 1 cut(s) 1799
AlwNI CAGNNNCTG 1 cut(s) 1153
AoxI GGCC 4 cut(s) 561, 1314, 1796, 2073
ApaLI GTGCAC 1 cut(s) 2045
ApeKI GCWGC 5 cut(s) 670, 673, 861, 992, 2345
ApoI RAATTY 5 cut(s) 375, 1553, 1665, 1901, 1939
ArsI GACNNNNNNTTYG 6 cut(s) 771, 803, 1559, 1591, 2275, 2307
Asp700I GAANNNNTTC 1 cut(s) 1047
Asp718I GGTACC 2 cut(s) 1624, 1776
AspS9I GGNCC 4 cut(s) 454, 562, 1796, 2119
AsuC2I CCSGG 1 cut(s) 2059
AsuHPI GGTGA 2 cut(s) 1840, 2008
AvaII GGWCC 2 cut(s) 454, 2119
BaeGI GKGCMC 1 cut(s) 2049
BaeI ACNNNNGTAYC 2 cut(s) 1608, 1641
BalI TGGCCA 1 cut(s) 1316
BanI GGYRCC 2 cut(s) 1624, 1776
BanII GRGCYC 1 cut(s) 2178
BarI GAAGNNNNNNTAC 2 cut(s) 1099, 1131
Bbv12I GWGCWC 2 cut(s) 2049, 2178
BbvI GCAGC 5 cut(s) 657, 685, 873, 979, 2332
BccI CCATC 5 cut(s) 224, 938, 1145, 1240, 1987
BcgI CGANNNNNNTGC 2 cut(s) 466, 500
BciT130I CCWGG 4 cut(s) 458, 1154, 1621, 1629
BciVI GTATCC 2 cut(s) 46, 166
BclI TGATCA 2 cut(s) 1959, 2277
BcnI CCSGG 1 cut(s) 2059
BcoDI GTCTC 3 cut(s) 1352, 1663, 1746
BfaI CTAG 3 cut(s) 908, 1610, 2196
BfmI CTRYAG 4 cut(s) 671, 1101, 1578, 2371
BfuAI ACCTGC 1 cut(s) 1204
BfuI GTATCC 2 cut(s) 46, 166
BglI GCCNNNNNGGC 1 cut(s) 989
BglII AGATCT 2 cut(s) 904, 1804
BisI GCNGC 5 cut(s) 671, 674, 862, 993, 2346
BlsI GCNGC 5 cut(s) 672, 675, 863, 994, 2347
BmcAI AGTACT 1 cut(s) 118
Bme1390I CCNGG 5 cut(s) 458, 1154, 1621, 1629, 2059
Bme18I GGWCC 2 cut(s) 454, 2119
BmgT120I GGNCC 4 cut(s) 454, 562, 1796, 2119
BmiI GGNNCC 5 cut(s) 472, 1537, 1626, 1778, 1891
BmrFI CCNGG 5 cut(s) 458, 1154, 1621, 1629, 2059
BmrI ACTGGG 2 cut(s) 781, 1384
BmsI GCATC 4 cut(s) 650, 2068, 2142, 2182
BmuI ACTGGG 2 cut(s) 781, 1384
BplI GAGNNNNNCTC 4 cut(s) 106, 138, 2003, 2035
BpmI CTGGAG 1 cut(s) 2304
BpuMI CCSGG 1 cut(s) 2059
BsaBI GATNNNNATC 3 cut(s) 574, 737, 1029
BsaJI CCNNGG 3 cut(s) 636, 1620, 1911
BsaWI WCCGGW 1 cut(s) 2121
Bsc4I CCNNNNNNNGG 5 cut(s) 850, 1374, 1610, 1634, 1985
Bse118I RCCGGY 1 cut(s) 983
Bse3DI GCAATG 2 cut(s) 900, 1306
Bse8I GATNNNNATC 3 cut(s) 574, 737, 1029
BseBI CCWGG 4 cut(s) 458, 1154, 1621, 1629
BseDI CCNNGG 3 cut(s) 636, 1620, 1911
BseGI GGATG 1 cut(s) 1027
BseJI GATNNNNATC 3 cut(s) 574, 737, 1029
BseLI CCNNNNNNNGG 5 cut(s) 850, 1374, 1610, 1634, 1985
BseMI GCAATG 2 cut(s) 900, 1306
BseMII CTCAG 4 cut(s) 29, 34, 1051, 1674
BseRI GAGGAG 1 cut(s) 2186
BseSI GKGCMC 1 cut(s) 2049
BseXI GCAGC 5 cut(s) 657, 685, 873, 979, 2332
BseYI CCCAGC 2 cut(s) 505, 1603
BsgI GTGCAG 1 cut(s) 2126
Bsh1236I CGCG 2 cut(s) 1065, 2247
BshFI GGCC 4 cut(s) 563, 1316, 1798, 2075
BshNI GGYRCC 2 cut(s) 1624, 1776
BsiHKAI GWGCWC 2 cut(s) 2049, 2178
BsiSI CCGG 4 cut(s) 984, 1670, 2059, 2122
BslFI GGGAC 5 cut(s) 154, 697, 788, 1745, 1871
BslI CCNNNNNNNGG 5 cut(s) 850, 1374, 1610, 1634, 1985
BsmAI GTCTC 3 cut(s) 1352, 1663, 1746
BsmFI GGGAC 5 cut(s) 154, 697, 788, 1745, 1871
BsnI GGCC 4 cut(s) 563, 1316, 1798, 2075
Bsp1286I GDGCHC 2 cut(s) 2049, 2178
Bsp1407I TGTACA 1 cut(s) 813
Bsp143I GATC 9 cut(s) 545, 904, 954, 1722, 1791, 1804, 1959, 2013, 2277
Bsp68I TCGCGA 2 cut(s) 1065, 2247
BspACI CCGC 1 cut(s) 2269
BspANI GGCC 4 cut(s) 563, 1316, 1798, 2075
BspCNI CTCAG 4 cut(s) 28, 33, 1050, 1673
BspFNI CGCG 2 cut(s) 1065, 2247
BspHI TCATGA 4 cut(s) 1015, 1279, 1515, 2280
BspLI GGNNCC 5 cut(s) 472, 1537, 1626, 1778, 1891
BspMAI CTGCAG 2 cut(s) 675, 1582
BspMI ACCTGC 1 cut(s) 1204
BspPI GGATC 1 cut(s) 1799
BspT107I GGYRCC 2 cut(s) 1624, 1776
BsrDI GCAATG 2 cut(s) 900, 1306
BsrFI RCCGGY 1 cut(s) 983
BsrGI TGTACA 1 cut(s) 813
BssAI RCCGGY 1 cut(s) 983
BssECI CCNNGG 3 cut(s) 636, 1620, 1911
BssMI GATC 9 cut(s) 545, 904, 954, 1722, 1791, 1804, 1959, 2013, 2277
BssNAI GTATAC 1 cut(s) 808
BssT1I CCWWGG 1 cut(s) 636
Bst1107I GTATAC 1 cut(s) 808
Bst2UI CCWGG 4 cut(s) 458, 1154, 1621, 1629
Bst4CI ACNGT 5 cut(s) 178, 552, 845, 1264, 1413
Bst6I CTCTTC 3 cut(s) 668, 1376, 1872
BstAPI GCANNNNNTGC 1 cut(s) 899
BstAUI TGTACA 1 cut(s) 813
BstC8I GCNNGC 2 cut(s) 312, 1973
BstDEI CTNAG 5 cut(s) 15, 20, 1037, 1660, 2148
BstDSI CCRYGG 1 cut(s) 1911
BstF5I GGATG 1 cut(s) 1027
BstFNI CGCG 2 cut(s) 1065, 2247
BstKTI GATC 9 cut(s) 548, 907, 957, 1725, 1794, 1807, 1962, 2016, 2280
BstMAI GTCTC 3 cut(s) 1352, 1663, 1746
BstMBI GATC 9 cut(s) 545, 904, 954, 1722, 1791, 1804, 1959, 2013, 2277
BstMWI GCNNNNNNNGC 2 cut(s) 899, 989
BstNI CCWGG 4 cut(s) 458, 1154, 1621, 1629
BstNSI RCATGY 3 cut(s) 314, 814, 2085
BstSCI CCNGG 5 cut(s) 456, 1152, 1619, 1627, 2057
BstSFI CTRYAG 4 cut(s) 671, 1101, 1578, 2371
BstSLI GKGCMC 1 cut(s) 2049
BstUI CGCG 2 cut(s) 1065, 2247
BstV1I GCAGC 5 cut(s) 657, 685, 873, 979, 2332
BstX2I RGATCY 2 cut(s) 904, 1804
BstXI CCANNNNNNTGG 1 cut(s) 1312
BstYI RGATCY 2 cut(s) 904, 1804
BstZ17I GTATAC 1 cut(s) 808
BsuI GTATCC 2 cut(s) 46, 166
BsuRI GGCC 4 cut(s) 563, 1316, 1798, 2075
BtgI CCRYGG 1 cut(s) 1911
BtgZI GCGATG 1 cut(s) 1448
BtsCI GGATG 1 cut(s) 1027
BtsIMutI CAGTG 4 cut(s) 548, 1045, 1154, 1355
BtuMI TCGCGA 2 cut(s) 1065, 2247
BveI ACCTGC 1 cut(s) 1204
Cac8I GCNNGC 2 cut(s) 312, 1973
CaiI CAGNNNCTG 1 cut(s) 1153
CciI TCATGA 4 cut(s) 1015, 1279, 1515, 2280
Cfr10I RCCGGY 1 cut(s) 983
Cfr13I GGNCC 4 cut(s) 454, 562, 1796, 2119
Csp6I GTAC 9 cut(s) 117, 279, 292, 626, 814, 1625, 1777, 2067, 2208
CviQI GTAC 9 cut(s) 117, 279, 292, 626, 814, 1625, 1777, 2067, 2208
DdeI CTNAG 5 cut(s) 15, 20, 1037, 1660, 2148
DpnI GATC 9 cut(s) 547, 906, 956, 1724, 1793, 1806, 1961, 2015, 2279
DpnII GATC 9 cut(s) 545, 904, 954, 1722, 1791, 1804, 1959, 2013, 2277
DraI TTTAAA 1 cut(s) 2007
EaeI YGGCCR 2 cut(s) 1314, 2073
Eam1104I CTCTTC 3 cut(s) 668, 1376, 1872
EarI CTCTTC 3 cut(s) 668, 1376, 1872
Ecl136II GAGCTC 1 cut(s) 2176
Eco130I CCWWGG 1 cut(s) 636
Eco24I GRGCYC 1 cut(s) 2178
Eco32I GATATC 2 cut(s) 160, 1231
Eco47I GGWCC 2 cut(s) 454, 2119
Eco53kI GAGCTC 1 cut(s) 2176
Eco57I CTGAAG 2 cut(s) 251, 1080
EcoICRI GAGCTC 1 cut(s) 2176
EcoRI GAATTC 4 cut(s) 1553, 1665, 1901, 1939
EcoRII CCWGG 4 cut(s) 456, 1152, 1619, 1627
EcoRV GATATC 2 cut(s) 160, 1231
EcoT14I CCWWGG 1 cut(s) 636
EcoT22I ATGCAT 2 cut(s) 363, 2083
EcoT38I GRGCYC 1 cut(s) 2178
ErhI CCWWGG 1 cut(s) 636
FaqI GGGAC 5 cut(s) 154, 697, 788, 1745, 1871
FauNDI CATATG 2 cut(s) 1756, 2023
FbaI TGATCA 2 cut(s) 1959, 2277
FblI GTMKAC 1 cut(s) 807
Fnu4HI GCNGC 5 cut(s) 671, 674, 862, 993, 2346
FokI GGATG 1 cut(s) 1034
FriOI GRGCYC 1 cut(s) 2178
Fsp4HI GCNGC 5 cut(s) 671, 674, 862, 993, 2346
FspBI CTAG 3 cut(s) 908, 1610, 2196
GluI GCNGC 5 cut(s) 671, 674, 862, 993, 2346
GsaI CCCAGC 2 cut(s) 509, 1607
GsuI CTGGAG 1 cut(s) 2304
HaeIII GGCC 4 cut(s) 563, 1316, 1798, 2075
HapII CCGG 4 cut(s) 984, 1670, 2059, 2122
HincII GTYRAC 1 cut(s) 841
HindII GTYRAC 1 cut(s) 841
HindIII AAGCTT 1 cut(s) 609
HinfI GANTC 9 cut(s) 11, 398, 596, 685, 1043, 1696, 1931, 1999, 2030
HpaII CCGG 4 cut(s) 984, 1670, 2059, 2122
HphI GGTGA 2 cut(s) 1840, 2008
Hpy166II GTNNAC 3 cut(s) 808, 841, 2047
Hpy188I TCNGA 8 cut(s) 87, 169, 583, 714, 889, 920, 1198, 1773
Hpy8I GTNNAC 3 cut(s) 808, 841, 2047
HpyAV CCTTC 6 cut(s) 205, 266, 385, 1744, 1782, 2243
HpyCH4III ACNGT 5 cut(s) 178, 552, 845, 1264, 1413
HpyCH4IV ACGT 1 cut(s) 837
HpyF10VI GCNNNNNNNGC 2 cut(s) 899, 989
HpyF3I CTNAG 5 cut(s) 15, 20, 1037, 1660, 2148
HpySE526I ACGT 1 cut(s) 837
KpnI GGTACC 2 cut(s) 1628, 1780
Ksp22I TGATCA 2 cut(s) 1959, 2277
Kzo9I GATC 9 cut(s) 545, 904, 954, 1722, 1791, 1804, 1959, 2013, 2277
LmnI GCTCC 5 cut(s) 127, 715, 1472, 2173, 2181
Lsp1109I GCAGC 5 cut(s) 657, 685, 873, 979, 2332
LweI GCATC 4 cut(s) 650, 2068, 2142, 2182
MaeI CTAG 3 cut(s) 908, 1610, 2196
MaeII ACGT 1 cut(s) 837
MaeIII GTNAC 6 cut(s) 437, 1264, 1336, 1353, 1615, 2271
MalI GATC 9 cut(s) 547, 906, 956, 1724, 1793, 1806, 1961, 2015, 2279
MboI GATC 9 cut(s) 545, 904, 954, 1722, 1791, 1804, 1959, 2013, 2277
MboII GAAGA 9 cut(s) 570, 655, 1393, 1408, 1669, 1691, 1889, 1928, 2314
MfeI CAATTG 1 cut(s) 1269
MflI RGATCY 2 cut(s) 904, 1804
MhlI GDGCHC 2 cut(s) 2049, 2178
MlsI TGGCCA 1 cut(s) 1316
MluNI TGGCCA 1 cut(s) 1316
MlyI GAGTC 3 cut(s) 605, 679, 2024
MmeI TCCRAC 1 cut(s) 827
Mox20I TGGCCA 1 cut(s) 1316
Mph1103I ATGCAT 2 cut(s) 363, 2083
MroXI GAANNNNTTC 1 cut(s) 1047
MscI TGGCCA 1 cut(s) 1316
MseI TTAA 6 cut(s) 251, 834, 1562, 1809, 2006, 2063
MslI CAYNNNNRTG 4 cut(s) 301, 1020, 1038, 1910
Msp20I TGGCCA 1 cut(s) 1316
MspA1I CMGCKG 1 cut(s) 1100
MspI CCGG 4 cut(s) 984, 1670, 2059, 2122
MspR9I CCNGG 5 cut(s) 458, 1154, 1621, 1629, 2059
MunI CAATTG 1 cut(s) 1269
MvaI CCWGG 4 cut(s) 458, 1154, 1621, 1629
MvnI CGCG 2 cut(s) 1065, 2247
MwoI GCNNNNNNNGC 2 cut(s) 899, 989
NciI CCSGG 1 cut(s) 2059
NdeI CATATG 2 cut(s) 1756, 2023
NdeII GATC 9 cut(s) 545, 904, 954, 1722, 1791, 1804, 1959, 2013, 2277
NlaIV GGNNCC 5 cut(s) 472, 1537, 1626, 1778, 1891
NmuCI GTSAC 3 cut(s) 437, 1336, 1353
NruI TCGCGA 2 cut(s) 1065, 2247
NsiI ATGCAT 2 cut(s) 363, 2083
NspI RCATGY 3 cut(s) 314, 814, 2085
OliI CACNNNNGTG 1 cut(s) 301
PaeI GCATGC 1 cut(s) 314
PagI TCATGA 4 cut(s) 1015, 1279, 1515, 2280
PciI ACATGT 1 cut(s) 810
PdmI GAANNNNTTC 1 cut(s) 1047
PfeI GAWTC 6 cut(s) 11, 398, 1043, 1696, 1931, 1999
PflMI CCANNNNNTGG 1 cut(s) 1985
PkrI GCNGC 5 cut(s) 672, 675, 863, 994, 2347
PleI GAGTC 3 cut(s) 604, 679, 2024
PpsI GAGTC 3 cut(s) 604, 679, 2024
PscI ACATGT 1 cut(s) 810
Psp124BI GAGCTC 1 cut(s) 2178
Psp1406I AACGTT 1 cut(s) 837
Psp6I CCWGG 4 cut(s) 456, 1152, 1619, 1627
PspFI CCCAGC 2 cut(s) 505, 1603
PspGI CCWGG 4 cut(s) 456, 1152, 1619, 1627
PspN4I GGNNCC 5 cut(s) 472, 1537, 1626, 1778, 1891
PspPI GGNCC 4 cut(s) 454, 562, 1796, 2119
PstI CTGCAG 2 cut(s) 675, 1582
PstNI CAGNNNCTG 1 cut(s) 1153
PsuI RGATCY 2 cut(s) 904, 1804
PvuII CAGCTG 1 cut(s) 1100
RruI TCGCGA 2 cut(s) 1065, 2247
RsaI GTAC 9 cut(s) 118, 280, 293, 627, 815, 1626, 1778, 2068, 2209
RsaNI GTAC 9 cut(s) 117, 279, 292, 626, 814, 1625, 1777, 2067, 2208
RseI CAYNNNNRTG 4 cut(s) 301, 1020, 1038, 1910
SacI GAGCTC 1 cut(s) 2178
SaqAI TTAA 6 cut(s) 251, 834, 1562, 1809, 2006, 2063
SatI GCNGC 5 cut(s) 671, 674, 862, 993, 2346
Sau3AI GATC 9 cut(s) 545, 904, 954, 1722, 1791, 1804, 1959, 2013, 2277
Sau96I GGNCC 4 cut(s) 454, 562, 1796, 2119
ScaI AGTACT 1 cut(s) 118
SchI GAGTC 3 cut(s) 605, 679, 2024
ScrFI CCNGG 5 cut(s) 458, 1154, 1621, 1629, 2059
SduI GDGCHC 2 cut(s) 2049, 2178
SfaNI GCATC 4 cut(s) 650, 2068, 2142, 2182
SfcI CTRYAG 4 cut(s) 671, 1101, 1578, 2371
SinI GGWCC 2 cut(s) 454, 2119
SmiMI CAYNNNNRTG 4 cut(s) 301, 1020, 1038, 1910
SphI GCATGC 1 cut(s) 314
SsiI CCGC 1 cut(s) 2269
SspI AATATT 1 cut(s) 763
SspMI CTAG 3 cut(s) 908, 1610, 2196
SstI GAGCTC 1 cut(s) 2178
StyD4I CCNGG 5 cut(s) 456, 1152, 1619, 1627, 2057
StyI CCWWGG 1 cut(s) 636
TaaI ACNGT 5 cut(s) 178, 552, 845, 1264, 1413
TaiI ACGT 1 cut(s) 840
TaqI TCGA 3 cut(s) 401, 1551, 1557
TaqII GACCGA 1 cut(s) 505
TatI WGTACW 4 cut(s) 116, 291, 813, 2066
TfiI GAWTC 6 cut(s) 11, 398, 1043, 1696, 1931, 1999
Tru1I TTAA 6 cut(s) 251, 834, 1562, 1809, 2006, 2063
Tru9I TTAA 6 cut(s) 251, 834, 1562, 1809, 2006, 2063
TscAI CASTG 4 cut(s) 555, 1045, 1154, 1362
TseFI GTSAC 3 cut(s) 437, 1336, 1353
TseI GCWGC 5 cut(s) 670, 673, 861, 992, 2345
Tsp45I GTSAC 3 cut(s) 437, 1336, 1353
TspGWI ACGGA 2 cut(s) 1900, 2023
TspRI CASTG 4 cut(s) 555, 1045, 1154, 1362
Van91I CCANNNNNTGG 1 cut(s) 1985
VneI GTGCAC 1 cut(s) 2045
VpaK11BI GGWCC 2 cut(s) 454, 2119
XapI RAATTY 5 cut(s) 375, 1553, 1665, 1901, 1939
XceI RCATGY 3 cut(s) 314, 814, 2085
XcmI CCANNNNNNNNNTGG 1 cut(s) 1065
XmiI GTMKAC 1 cut(s) 807
XmnI GAANNNNTTC 1 cut(s) 1047
XspI CTAG 3 cut(s) 908, 1610, 2196
ZrmI AGTACT 1 cut(s) 118
Zsp2I ATGCAT 2 cut(s) 363, 2083
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.