protein modification by small protein conjugation or removal
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 495 |
| AcoI | YGGCCR | 1 cut(s) | 333 |
| AcsI | RAATTY | 1 cut(s) | 182 |
| AcuI | CTGAAG | 1 cut(s) | 257 |
| AgsI | TTSAA | 6 cut(s) | 89, 161, 203, 268, 431, 451 |
| Alw26I | GTCTC | 1 cut(s) | 413 |
| AoxI | GGCC | 1 cut(s) | 333 |
| ApoI | RAATTY | 1 cut(s) | 182 |
| AspS9I | GGNCC | 1 cut(s) | 400 |
| AsuC2I | CCSGG | 1 cut(s) | 373 |
| AsuHPI | GGTGA | 2 cut(s) | 58, 428 |
| AvaII | GGWCC | 1 cut(s) | 400 |
| BalI | TGGCCA | 1 cut(s) | 335 |
| BbvCI | CCTCAGC | 1 cut(s) | 72 |
| BccI | CCATC | 2 cut(s) | 127, 240 |
| BcnI | CCSGG | 1 cut(s) | 373 |
| BcoDI | GTCTC | 1 cut(s) | 413 |
| Bme1390I | CCNGG | 1 cut(s) | 373 |
| Bme18I | GGWCC | 1 cut(s) | 400 |
| BmgT120I | GGNCC | 1 cut(s) | 400 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrFI | CCNGG | 1 cut(s) | 373 |
| Bpu10I | CCTNAGC | 1 cut(s) | 72 |
| BpuMI | CCSGG | 1 cut(s) | 373 |
| Bse1I | ACTGG | 1 cut(s) | 301 |
| BseMII | CTCAG | 4 cut(s) | 63, 279, 287, 300 |
| BseNI | ACTGG | 1 cut(s) | 301 |
| BshFI | GGCC | 1 cut(s) | 335 |
| BsiSI | CCGG | 1 cut(s) | 372 |
| BslFI | GGGAC | 1 cut(s) | 289 |
| BsmAI | GTCTC | 1 cut(s) | 413 |
| BsmFI | GGGAC | 1 cut(s) | 289 |
| BsnI | GGCC | 1 cut(s) | 335 |
| BspANI | GGCC | 1 cut(s) | 335 |
| BspCNI | CTCAG | 4 cut(s) | 64, 280, 288, 301 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspQI | GCTCTTC | 1 cut(s) | 513 |
| BsrI | ACTGG | 1 cut(s) | 301 |
| Bst6I | CTCTTC | 3 cut(s) | 185, 438, 513 |
| BstDEI | CTNAG | 4 cut(s) | 72, 288, 296, 309 |
| BstMAI | GTCTC | 1 cut(s) | 413 |
| BstNSI | RCATGY | 1 cut(s) | 145 |
| BstSCI | CCNGG | 1 cut(s) | 371 |
| BsuRI | GGCC | 1 cut(s) | 335 |
| Cfr13I | GGNCC | 1 cut(s) | 400 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 16, 51 |
| CviAII | CATG | 2 cut(s) | 142, 499 |
| CviJI | RGCY | 5 cut(s) | 273, 300, 335, 371, 506 |
| CviKI_1 | RGCY | 5 cut(s) | 273, 300, 335, 371, 506 |
| DdeI | CTNAG | 4 cut(s) | 72, 288, 296, 309 |
| EaeI | YGGCCR | 1 cut(s) | 333 |
| Eam1104I | CTCTTC | 3 cut(s) | 185, 438, 513 |
| EarI | CTCTTC | 3 cut(s) | 185, 438, 513 |
| Eco32I | GATATC | 1 cut(s) | 217 |
| Eco47I | GGWCC | 1 cut(s) | 400 |
| Eco57I | CTGAAG | 1 cut(s) | 257 |
| EcoO109I | RGGNCCY | 1 cut(s) | 400 |
| EcoRV | GATATC | 1 cut(s) | 217 |
| FaeI | CATG | 2 cut(s) | 145, 502 |
| FaqI | GGGAC | 1 cut(s) | 289 |
| FatI | CATG | 2 cut(s) | 141, 498 |
| FauNDI | CATATG | 1 cut(s) | 249 |
| FblI | GTMKAC | 1 cut(s) | 495 |
| HaeIII | GGCC | 1 cut(s) | 335 |
| HapII | CCGG | 1 cut(s) | 372 |
| Hin1II | CATG | 2 cut(s) | 145, 502 |
| HinfI | GANTC | 4 cut(s) | 193, 221, 292, 421 |
| HpaII | CCGG | 1 cut(s) | 372 |
| HphI | GGTGA | 2 cut(s) | 58, 428 |
| Hpy166II | GTNNAC | 1 cut(s) | 496 |
| Hpy188I | TCNGA | 3 cut(s) | 106, 237, 297 |
| Hpy188III | TCNNGA | 5 cut(s) | 23, 61, 86, 431, 512 |
| Hpy8I | GTNNAC | 1 cut(s) | 496 |
| HpyAV | CCTTC | 2 cut(s) | 180, 391 |
| HpyF3I | CTNAG | 4 cut(s) | 72, 288, 296, 309 |
| Hsp92II | CATG | 2 cut(s) | 145, 502 |
| LguI | GCTCTTC | 1 cut(s) | 513 |
| LpnPI | CCDG | 7 cut(s) | 161, 225, 314, 321, 385, 416, 497 |
| MaeIII | GTNAC | 1 cut(s) | 361 |
| MboII | GAAGA | 5 cut(s) | 158, 202, 250, 455, 500 |
| MlsI | TGGCCA | 1 cut(s) | 335 |
| MluCI | AATT | 2 cut(s) | 182, 435 |
| MluNI | TGGCCA | 1 cut(s) | 335 |
| MlyI | GAGTC | 2 cut(s) | 202, 415 |
| MmeI | TCCRAC | 1 cut(s) | 372 |
| MnlI | CCTC | 4 cut(s) | 67, 109, 433, 496 |
| Mox20I | TGGCCA | 1 cut(s) | 335 |
| MscI | TGGCCA | 1 cut(s) | 335 |
| MseI | TTAA | 1 cut(s) | 378 |
| MslI | CAYNNNNRTG | 1 cut(s) | 489 |
| Msp20I | TGGCCA | 1 cut(s) | 335 |
| MspI | CCGG | 1 cut(s) | 372 |
| MspR9I | CCNGG | 1 cut(s) | 373 |
| NciI | CCSGG | 1 cut(s) | 373 |
| NdeI | CATATG | 1 cut(s) | 249 |
| NlaIII | CATG | 2 cut(s) | 145, 502 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmuCI | GTSAC | 1 cut(s) | 361 |
| NspI | RCATGY | 1 cut(s) | 145 |
| PciSI | GCTCTTC | 1 cut(s) | 513 |
| PfeI | GAWTC | 2 cut(s) | 221, 292 |
| PleI | GAGTC | 2 cut(s) | 201, 415 |
| PpsI | GAGTC | 2 cut(s) | 201, 415 |
| PpuMI | RGGWCCY | 1 cut(s) | 400 |
| Psp5II | RGGWCCY | 1 cut(s) | 400 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PspPI | GGNCC | 1 cut(s) | 400 |
| PspPPI | RGGWCCY | 1 cut(s) | 400 |
| RseI | CAYNNNNRTG | 1 cut(s) | 489 |
| SapI | GCTCTTC | 1 cut(s) | 513 |
| SaqAI | TTAA | 1 cut(s) | 378 |
| Sau96I | GGNCC | 1 cut(s) | 400 |
| SchI | GAGTC | 2 cut(s) | 202, 415 |
| ScrFI | CCNGG | 1 cut(s) | 373 |
| SetI | ASST | 4 cut(s) | 78, 180, 284, 405 |
| SinI | GGWCC | 1 cut(s) | 400 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 489 |
| Sse9I | AATT | 2 cut(s) | 182, 435 |
| StyD4I | CCNGG | 1 cut(s) | 371 |
| TaqI | TCGA | 1 cut(s) | 219 |
| TasI | AATT | 2 cut(s) | 182, 435 |
| TfiI | GAWTC | 2 cut(s) | 221, 292 |
| Tru1I | TTAA | 1 cut(s) | 378 |
| Tru9I | TTAA | 1 cut(s) | 378 |
| TseFI | GTSAC | 1 cut(s) | 361 |
| Tsp45I | GTSAC | 1 cut(s) | 361 |
| TspDTI | ATGAA | 2 cut(s) | 114, 494 |
| VpaK11BI | GGWCC | 1 cut(s) | 400 |
| XapI | RAATTY | 1 cut(s) | 182 |
| XceI | RCATGY | 1 cut(s) | 145 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 328 |
| XmiI | GTMKAC | 1 cut(s) | 495 |