AT3G58440

MATH domain and coiled-coil domain-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
21618446 .. 21621249
2804 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G58440.1

Sequence Viewer

Length: 1806 bp
ATGTCATTAGATTTGAAGATGCAAGATAAATTTACTTGGGTTTTGGAAAAGTTCTCATCTTTGAAAGATCAGTGCTACTCTCCCGTCTTCACGGTCGCCGGCTGCAATTGGCGTCTTCTTTCTTTTCTCAAAGGAGCTAAGAATGATCGTTACTTTTCCGTGTATCTTGATCTTGAGCCTGGATCTTTGCCACCAGGATGGAGAAGAGAAGTGAAATTTAGCATTACTCTTGACAATGTTTGCCCTAATACCGACAGAGTATTAGGAGGGCCATGCTTTTTCGATGCAAAGAGTAACATTTGGGGTTTTCAAGATTTCTTGCTCCTTGAAAAACTTGTTAATATAGCTGAAGGATTTTTGGTGAATGACAGACTCACTATCGTCGCTGAAGTAGATGTTTTACCTTCTATTGTTGTGCCATTGGAACCTGTGAAGATTATTTCATCTCAAGAGAAGTTAGATGATGATGATGATGATTGTGACGACGCATCTGAAGAGAGTTCGGATGATGGAGATGCATCCCAGGAGTATACTGATGATAATGATGATGAAGTTTGTGACATAAGTCGTTTGAACCTAGTGAATGCCATAGAGAATGCTTTTTATACGAGTATTAGAAGTTGTAATAGTTTGGTGGCTGAGACTGAGGTTTCCAATGATGAAAATGATGATGCACCTAAAAAAGATGTTGATGATGAGGCTTCATCTCTTGTTTTGAATGATAGTGCTAGAAACGGAAGTAGTATAGAACAAGTGAAAAAGACGAGGCTTCATCTCGTGTTGGAGGATGCCTCTCGTGGTAGGGATCCTAACACCGTGGCATGTGTTACGGAGACTTGTGATTATGTGCTTATGGAGATTCAATCAGATAAGGAAACAGTGGATATCAATGGGTTTGTGGTTGTTTCTTCCAAGGCGGAATCTGTGAGACGTATACTCGAAAGACACCCAGACATATCAGTGGAGTTTCGTGGAAAGAACCAACAACTGAGGAACGCATGTATGAATTTCCTGCTCAGCTTAATCGAAACGATGTGCCAGTCACTGGAGGAGCTCTCGAATGAAGATCTTGTGGAAGCAGACGTAGCGTTGACATACTTGAGAGATGCAGGGTTTAAGGTTGATTGGTTGGAGAAGAAGCTGGACCAACTAAAGGAAAAGAAGGAGGAAGAGATGTCTGGTTTGGCCAGGCTCCATGAGATAGAGGAAAATCTAGTGATATTGAAGCAAAAGTGGTCAGACCTGGGTGCTCTTGCGGAGAAGGAGAAGGCAGACTTTGTGGCATCTAAGACTGAGGTTTCTAACAATGAAAATGATTATGCAAATAAAGAAGATGTCGATGATGAGGCTTCATCTCTTGTTTGGACTGACAGTGCTAGAGACACAAAAACTGGTGGTAAGGCGTTTAACAATGTGGCATCTGTTGCAGAGACTTCAAATAATGTGCTTACAGAGATTCCACCAGCAAAGGAAACTACGGATGTCAATGGGTTTGAGGTTTTTATGTCCCAGACAAAGCTGGATGAGGTCTCTCGGAAGAAGAAGATGGAGCAGGGTAGTGGGCCCCGGCTACAAACAATGGAGGAACGGTTGCAGAAGCTGAAGCTTTTGTTCGTGGATCTTGAATCTCAGCTGCAGAAGGAAAAAGTGGAGGCTTTGGTTGCGAGAGCTCCTCTCTCATTCAACGATGGTGTTTGCAGATTTTCAGGATTTTGTGGCTTTGTAGGTGAATCTTTGTTTTCTTATGCCTGGAAGCAAGGCCCAAGTTTGTATTCTTTGAGTTTTATGTCGAATGGGACTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

601

Amino Acids

67.4

Weight (kDa)

4.47

Isoelectric Point (pI)

42.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MATH_2 PF22486 10 - 131 1.5e-20 MATH domain
MATH PF00917 17 - 133 4e-09 MATH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000025)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31370 AT1G31380 AT1G31390 AT1G31400 AT2G01790 AT2G05400 AT2G05400 AT2G05400 AT2G05410 AT2G05410 AT2G05420 AT2G05430 AT2G42455 AT2G42460 AT2G42465 AT2G42470 AT2G42475 AT2G42480 AT3G27040 AT3G29580 AT3G44790 AT3G44800 AT3G44805 AT3G58200 AT3G58210 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58230 AT3G58240 AT3G58250 AT3G58260 AT3G58270 AT3G58270 AT3G58270 AT3G58280 AT3G58290 AT3G58290 AT3G58290 AT3G58300 AT3G58320 AT3G58330 AT3G58340 AT3G58340 AT3G58350 AT3G58350 AT3G58360 AT3G58370 AT3G58380 AT3G58400 AT3G58410 AT3G58410 AT3G58430 AT3G58430 AT3G58440 AT5G03550
fragaria_vesca FvH4_2g00084 FvH4_2g15701 FvH4_2g24334 FvH4_3g23322 FvH4_3g23322 FvH4_3g23322 FvH4_3g23482 FvH4_3g23482 FvH4_3g23482 FvH4_3g23491 FvH4_3g23492 FvH4_3g23510 FvH4_3g23520 FvH4_3g23520 FvH4_3g23520 FvH4_3g23580 FvH4_3g38842 FvH4_4g10396 FvH4_5g29370 FvH4_5g32130 FvH4_7g04570 FvH4_7g04571 FvH4_7g04741 FvH4_7g04741 FvH4_7g04750 FvH4_7g04750 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04770 FvH4_7g04770 FvH4_7g04770
malus_domestica MD00G1065000.v1.1 MD00G1065300.v1.1 MD02G1267400.v1.1 MD02G1267600.v1.1 MD02G1267700.v1.1 MD02G1267800.v1.1 MD02G1268100.v1.1 MD02G1268300.v1.1 MD02G1268400.v1.1 MD02G1268500.v1.1 MD03G1193600.v1.1 MD05G1071400.v1.1 MD07G1051000.v1.1 MD07G1051100.v1.1 MD07G1051200.v1.1 MD07G1051300.v1.1 MD07G1051500.v1.1 MD07G1051700.v1.1 MD07G1051800.v1.1 MD07G1085400.v1.1 MD07G1085500.v1.1 MD11G1177200.v1.1 MD11G1209800.v1.1 MD11G1209900.v1.1 MD11G1210000.v1.1 MD12G1048100.v1.1 MD12G1048600.v1.1 MD14G1046700.v1.1 MD14G1047400.v1.1
prunus_persica Prupe.2G051200_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052700_v2.0.a1 Prupe.2G052800_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G053100_v2.0.a1 Prupe.2G053300_v2.0.a1 Prupe.2G054800_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.4G223300_v2.0.a1 Prupe.4G223300_v2.0.a1
pyrus_communis pycom01g04720 pycom02g22950 pycom02g22960 pycom02g22970 pycom02g22990 pycom02g23000 pycom02g23010 pycom03g14600 pycom03g14610 pycom05g06150 pycom07g03820 pycom07g03830 pycom07g03850 pycom07g03860 pycom07g03880 pycom07g03890 pycom07g03900 pycom07g04000 pycom07g04010 pycom11g18540 pycom11g18560 pycom12g04190 pycom17g19100
rosa_chinensis RchiOBHm_Chr0c19g0500051 RchiOBHm_Chr1g0330011 RchiOBHm_Chr1g0330031 RchiOBHm_Chr1g0330041 RchiOBHm_Chr1g0330121 RchiOBHm_Chr1g0330141 RchiOBHm_Chr1g0330151 RchiOBHm_Chr1g0330181 RchiOBHm_Chr1g0330191 RchiOBHm_Chr1g0330201 RchiOBHm_Chr1g0330211 RchiOBHm_Chr1g0330221 RchiOBHm_Chr1g0367471 RchiOBHm_Chr2g0113311 RchiOBHm_Chr2g0148281 RchiOBHm_Chr4g0400061 RchiOBHm_Chr4g0437571 RchiOBHm_Chr5g0041361 RchiOBHm_Chr5g0041421 RchiOBHm_Chr5g0041481 RchiOBHm_Chr5g0041491 RchiOBHm_Chr5g0041501 RchiOBHm_Chr5g0041511 RchiOBHm_Chr5g0042491 RchiOBHm_Chr5g0042501 RchiOBHm_Chr6g0263551 RchiOBHm_Chr6g0286221 RchiOBHm_Chr7g0228171 RchiOBHm_Chr7g0231391 RchiOBHm_Chr7g0231401
rosa_laevigata RLG00000000870 RLG00000001420 RLG00000001582 RLG00000001602 RLG00000001700 RLG00000002476 RLG00000005787 RLG00000007689 RLG00000008446 RLG00000008811 RLG00000008812 RLG00000009013 RLG00000009942 RLG00000012752 RLG00000013511 RLG00000014053 RLG00000015257 RLG00000015258 RLG00000016149 RLG00000016691 RLG00000018661 RLG00000018662 RLG00000020991 RLG00000020992 RLG00000020993 RLG00000027309 RLG00000028568 RLG00000029119 RLG00000029371 RLG00000029563 RLG00000029818 RLG00000029819 RLG00000029821 RLG00000029822 RLG00000029824 RLG00000029827 RLG00000029828 RLG00000029829 RLG00000029841 RLG00000029843 RLG00000032676 RLG00000033366 RLG00000033367 RLG00000034023 RLG00000034066 RLG00000034072 RLG00000034073 RLG00000034074 RLG00000034130 RLG00000034133 RLG00000035487 RLG00000035488 RLG00000035793
rosa_multiflora Rmu_co8241405.1_g000001 Rmu_co8251033.1_g000001 Rmu_co8297611.1_g000001 Rmu_co8346639.1_g000001 Rmu_co8405917.1_g000001 Rmu_sc0000045.1_g000044 Rmu_sc0000061.1_g000032 Rmu_sc0000068.1_g000021 Rmu_sc0000068.1_g000022 Rmu_sc0000415.1_g000001 Rmu_sc0000499.1_g000003 Rmu_sc0000594.1_g000020 Rmu_sc0000673.1_g000007 Rmu_sc0000908.1_g000004 Rmu_sc0001123.1_g000013 Rmu_sc0001123.1_g000014 Rmu_sc0001167.1_g000026 Rmu_sc0001598.1_g000011 Rmu_sc0001696.1_g000003 Rmu_sc0001696.1_g000011 Rmu_sc0001696.1_g000019 Rmu_sc0001696.1_g000020 Rmu_sc0003007.1_g000016 Rmu_sc0003007.1_g000029 Rmu_sc0003051.1_g000010 Rmu_sc0003396.1_g000029 Rmu_sc0004798.1_g000020 Rmu_sc0005375.1_g000016 Rmu_sc0005375.1_g000017 Rmu_sc0005659.1_g000033 Rmu_sc0005659.1_g000034 Rmu_sc0006311.1_g000011 Rmu_sc0008249.1_g000002 Rmu_sc0008249.1_g000018 Rmu_sc0008600.1_g000014 Rmu_sc0009365.1_g000010 Rmu_sc0009365.1_g000022 Rmu_sc0009365.1_g000025 Rmu_sc0011112.1_g000008 Rmu_sc0011112.1_g000009 Rmu_sc0012031.1_g000020 Rmu_sc0013350.1_g000014 Rmu_sc0020359.1_g000004 Rmu_sc0021997.1_g000003 Rmu_sc0021997.1_g000004 Rmu_sc0023610.1_g000002 Rmu_sc0023611.1_g000001 Rmu_sc0028894.1_g000001 Rmu_sc0031050.1_g000001 Rmu_sc0041109.1_g000001 Rmu_ssc0000087.1_g000050 Rmu_ssc0000087.1_g000051 Rmu_ssc0000087.1_g000052 Rmu_ssc0000295.1_g000058 Rmu_ssc0000343.1_g000031 Rmu_ssc0000423.1_g000015 Rmu_ssc0000470.1_g000005 Rmu_ssc0000470.1_g000006
rosa_roxburghii Rroxscaffold_1G00005900 Rroxscaffold_1G00005910 Rroxscaffold_1G00012600 Rroxscaffold_1G00016860 Rroxscaffold_1G00032110 Rroxscaffold_1G00038140 Rroxscaffold_1G00038200 Rroxscaffold_1G00039020 Rroxscaffold_1G00039030 Rroxscaffold_1G00039080 Rroxscaffold_1G00039090 Rroxscaffold_1G00039270 Rroxscaffold_2G00097120 Rroxscaffold_2G00097130 Rroxscaffold_2G00137700 Rroxscaffold_2G00151740 Rroxscaffold_2G00151750 Rroxscaffold_3G00224160 Rroxscaffold_3G00224170 Rroxscaffold_3G00226080 Rroxscaffold_3G00226090 Rroxscaffold_3G00229350 Rroxscaffold_3G00231340 Rroxscaffold_4G00291390 Rroxscaffold_4G00316220 Rroxscaffold_4G00316230 Rroxscaffold_4G00320040 Rroxscaffold_4G00320050 Rroxscaffold_4G00320120 Rroxscaffold_4G00320140 Rroxscaffold_4G00320180 Rroxscaffold_4G00320270 Rroxscaffold_4G00320280 Rroxscaffold_4G00320290 Rroxscaffold_4G00320430 Rroxscaffold_4G00321910 Rroxscaffold_5G00348730 Rroxscaffold_5G00355020 Rroxscaffold_5G00355080 Rroxscaffold_5G00357490 Rroxscaffold_5G00376500 Rroxscaffold_5G00376510 Rroxscaffold_7G00179590 Rroxscaffold_7G00179600 Rroxscaffold_7G00198610
rosa_rugosa Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0086300 Rorug01G0086500 Rorug01G0087000 Rorug01G0087100 Rorug01G0087600 Rorug01G0087700 Rorug01G0087800 Rorug01G0087800 Rorug01G0302500 Rorug02G0249300 Rorug02G0249300 Rorug02G0249400 Rorug03G0189000 Rorug04G0181800 Rorug04G0283800.1 Rorug04G0283900.1 Rorug05G0043500 Rorug05G0191800 Rorug05G0191900 Rorug05G0192800 Rorug05G0192900 Rorug05G0193000 Rorug05G0201000 Rorug05G0201100 Rorug06G0173900 Rorug06G0173900 Rorug07G0009800 Rorug07G0246300.1 Rorug07G0246400
rosa_samantha Rh1AG103600 Rh1AG104800 Rh1AG105200 Rh1AG105300 Rh1AG105500 Rh1BG082000 Rh1BG082200 Rh1BG082300 Rh1BG082900 Rh1BG083000 Rh1BG083300 Rh1BG083500 Rh1BG083600 Rh1BG083800 Rh1BG083900 Rh1BG084000 Rh1BG084100 Rh1BG084200 Rh1BG092200 Rh1BG275300 Rh1CG098700 Rh1CG098800 Rh1CG100300 Rh1CG100400 Rh1CG100600 Rh1CG100900 Rh1CG101000 Rh1CG101700 Rh1DG066900 Rh1DG067000 Rh1DG106000 Rh1DG107600 Rh1DG107800 Rh1DG108100 Rh1DG108200 Rh1DG108600 Rh1DG108700 Rh1DG108900 Rh1DG109000 Rh1DG109100 Rh1DG109300 Rh1DG109400 Rh1DG109500 Rh1DG109700 Rh1DG109800 Rh1DG173900 Rh2AG270300 Rh2AG398900 Rh2CG245000 Rh2CG260700 Rh2CG278600 Rh2CG342400 Rh2CG385700 Rh3DG197200 Rh3DG197300 Rh4AG015100 Rh4BG347400 Rh4DG360400 Rh5AG278600 Rh5AG278700 Rh5AG286900 Rh5AG287000 Rh5BG282900 Rh5BG283000 Rh5BG283100 Rh5BG291400 Rh5CG314900 Rh5CG315100 Rh5CG315400 Rh5CG315700 Rh5CG315900 Rh5CG316000 Rh5CG323600 Rh5CG323700 Rh5DG291400 Rh5DG292300 Rh5DG292500 Rh5DG292700 Rh5DG292800 Rh5DG292900 Rh5DG301100 Rh5DG301200 Rh5DG301400 Rh5DG350900 Rh6BG407700 Rh6CG294900 Rh6DG286900 Rh7AG400400 Rh7AG420600 Rh7BG381700 Rh7BG395000 Rh7CG418600 Rh7CG440700 Rh7DG396500 Rh7DG413200
rosa_wichuraiana Rw1G003300 Rw1G008240 Rw1G008250 Rw1G008270 Rw1G008330 Rw1G008340 Rw1G008350 Rw1G008360 Rw1G008370 Rw1G008810 Rw1G021140 Rw3G020650 Rw5G026150 Rw5G026200 Rw5G026240 Rw5G026250 Rw5G026650 Rw5G030820 Rw7G006630 Rw7G030060 Rw7G034700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1045
AccI GTMKAC 2 cut(s) 530, 934
AciI CCGC 2 cut(s) 917, 1256
AclWI GGATC 4 cut(s) 190, 800, 813, 1626
AcoI YGGCCR 1 cut(s) 1185
AcsI RAATTY 3 cut(s) 29, 215, 1006
AcuI CTGAAG 4 cut(s) 369, 408, 513, 1622
AcyI GRCGYC 1 cut(s) 112
AfiI CCNNNNNNNGG 2 cut(s) 1045, 1153
AjnI CCWGG 6 cut(s) 178, 193, 522, 1187, 1242, 1748
AjuI GAANNNNNNNTTGG 2 cut(s) 1756, 1788
Alw21I GWGCWC 3 cut(s) 1056, 1252, 1672
Alw26I GTCTC 6 cut(s) 635, 827, 922, 1374, 1424, 1534
AlwI GGATC 4 cut(s) 190, 800, 813, 1626
AlwNI CAGNNNCTG 2 cut(s) 1045, 1600
AoxI GGCC 4 cut(s) 269, 1185, 1562, 1759
ApaI GGGCCC 1 cut(s) 1566
ApeKI GCWGC 2 cut(s) 102, 1633
ApoI RAATTY 3 cut(s) 29, 215, 1006
AspS9I GGNCC 5 cut(s) 269, 1144, 1562, 1563, 1760
AsuC2I CCSGG 1 cut(s) 1567
AsuHPI GGTGA 2 cut(s) 373, 1739
AvaII GGWCC 1 cut(s) 1144
BaeGI GKGCMC 1 cut(s) 1566
BalI TGGCCA 1 cut(s) 1187
BamHI GGATCC 1 cut(s) 805
BanII GRGCYC 3 cut(s) 1056, 1566, 1672
BauI CACGAG 2 cut(s) 776, 795
BbsI GAAGAC 2 cut(s) 79, 107
Bbv12I GWGCWC 3 cut(s) 1056, 1252, 1672
BbvI GCAGC 2 cut(s) 89, 1620
BccI CCATC 4 cut(s) 192, 503, 1540, 1682
BciT130I CCWGG 6 cut(s) 180, 195, 524, 1189, 1244, 1750
BcnI CCSGG 1 cut(s) 1567
BcoDI GTCTC 6 cut(s) 635, 827, 922, 1374, 1424, 1534
BfaI CTAG 4 cut(s) 578, 729, 1214, 1377
BfmI CTRYAG 1 cut(s) 1634
BglII AGATCT 1 cut(s) 1066
BisI GCNGC 2 cut(s) 103, 1634
BlpI GCTNAGC 1 cut(s) 1016
BlsI GCNGC 2 cut(s) 104, 1635
Bme1390I CCNGG 7 cut(s) 180, 195, 524, 1189, 1244, 1567, 1750
Bme18I GGWCC 1 cut(s) 1144
BmgT120I GGNCC 5 cut(s) 269, 1144, 1562, 1563, 1760
BmiI GGNNCC 5 cut(s) 426, 807, 1193, 1564, 1565
BmrFI CCNGG 7 cut(s) 180, 195, 524, 1189, 1244, 1567, 1750
BoxI GACNNNNGTC 1 cut(s) 564
BpiI GAAGAC 2 cut(s) 79, 107
BplI GAGNNNNNCTC 8 cut(s) 776, 808, 1040, 1072, 1657, 1689, 1659, 1691
BpmI CTGGAG 1 cut(s) 1067
Bpu1102I GCTNAGC 1 cut(s) 1016
BpuEI CTTGAG 3 cut(s) 194, 432, 1120
BpuMI CCSGG 1 cut(s) 1567
BsaHI GRCGYC 1 cut(s) 112
BsaI GGTCTC 1 cut(s) 1534
BsaJI CCNNGG 5 cut(s) 522, 816, 912, 1243, 1565
BsaXI ACNNNNNCTCC 2 cut(s) 1574, 1604
Bsc4I CCNNNNNNNGG 2 cut(s) 1045, 1153
Bse118I RCCGGY 1 cut(s) 98
Bse1I ACTGG 3 cut(s) 1039, 1050, 1396
BseBI CCWGG 6 cut(s) 180, 195, 524, 1189, 1244, 1750
BseDI CCNNGG 5 cut(s) 522, 816, 912, 1243, 1565
BseGI GGATG 6 cut(s) 203, 511, 518, 793, 1486, 1528
BseLI CCNNNNNNNGG 2 cut(s) 1045, 1153
BseMII CTCAG 7 cut(s) 630, 636, 980, 1030, 1284, 1643, 1791
BseNI ACTGG 3 cut(s) 1039, 1050, 1396
BseRI GAGGAG 2 cut(s) 1064, 1662
BseSI GKGCMC 1 cut(s) 1566
BseXI GCAGC 2 cut(s) 89, 1620
Bsh1285I CGRYCG 1 cut(s) 96
BshFI GGCC 4 cut(s) 271, 1187, 1564, 1761
BsiEI CGRYCG 1 cut(s) 96
BsiHKAI GWGCWC 3 cut(s) 1056, 1252, 1672
BsiSI CCGG 2 cut(s) 99, 1567
BslFI GGGAC 1 cut(s) 1492
BslI CCNNNNNNNGG 2 cut(s) 1045, 1153
BsmAI GTCTC 6 cut(s) 635, 827, 922, 1374, 1424, 1534
BsmBI CGTCTC 1 cut(s) 922
BsmFI GGGAC 1 cut(s) 1492
BsmI GAATGC 2 cut(s) 589, 601
BsnI GGCC 4 cut(s) 271, 1187, 1564, 1761
Bso31I GGTCTC 1 cut(s) 1534
Bsp120I GGGCCC 1 cut(s) 1562
Bsp1286I GDGCHC 4 cut(s) 1056, 1252, 1566, 1672
Bsp143I GATC 7 cut(s) 67, 145, 169, 182, 805, 1066, 1618
Bsp1720I GCTNAGC 1 cut(s) 1016
BspACI CCGC 2 cut(s) 917, 1256
BspANI GGCC 4 cut(s) 271, 1187, 1564, 1761
BspCNI CTCAG 7 cut(s) 631, 637, 981, 1029, 1285, 1642, 1792
BspLI GGNNCC 5 cut(s) 426, 807, 1193, 1564, 1565
BspMAI CTGCAG 1 cut(s) 1638
BspPI GGATC 4 cut(s) 190, 800, 813, 1626
BspTNI GGTCTC 1 cut(s) 1534
BsrFI RCCGGY 1 cut(s) 98
BsrI ACTGG 3 cut(s) 1039, 1050, 1396
BssAI RCCGGY 1 cut(s) 98
BssECI CCNNGG 5 cut(s) 522, 816, 912, 1243, 1565
BssMI GATC 7 cut(s) 67, 145, 169, 182, 805, 1066, 1618
BssNAI GTATAC 2 cut(s) 531, 935
BssNI GRCGYC 1 cut(s) 112
BssSI CACGAG 2 cut(s) 776, 795
BssT1I CCWWGG 1 cut(s) 912
Bst1107I GTATAC 2 cut(s) 531, 935
Bst2BI CACGAG 2 cut(s) 776, 795
Bst2UI CCWGG 6 cut(s) 180, 195, 524, 1189, 1244, 1750
Bst4CI ACNGT 5 cut(s) 94, 817, 880, 1373, 1590
Bst6I CTCTTC 3 cut(s) 199, 489, 1164
BstACI GRCGYC 1 cut(s) 112
BstAPI GCANNNNNTGC 1 cut(s) 1424
BstC8I GCNNGC 1 cut(s) 100
BstDEI CTNAG 9 cut(s) 138, 639, 645, 989, 1016, 1287, 1293, 1629, 1800
BstDSI CCRYGG 1 cut(s) 816
BstF5I GGATG 6 cut(s) 203, 511, 518, 793, 1486, 1528
BstKTI GATC 7 cut(s) 70, 148, 172, 185, 808, 1069, 1621
BstMAI GTCTC 6 cut(s) 635, 827, 922, 1374, 1424, 1534
BstMBI GATC 7 cut(s) 67, 145, 169, 182, 805, 1066, 1618
BstMCI CGRYCG 1 cut(s) 96
BstMWI GCNNNNNNNGC 3 cut(s) 1085, 1424, 1661
BstNI CCWGG 6 cut(s) 180, 195, 524, 1189, 1244, 1750
BstNSI RCATGY 2 cut(s) 825, 1002
BstPAI GACNNNNGTC 1 cut(s) 564
BstSCI CCNGG 7 cut(s) 178, 193, 522, 1187, 1242, 1565, 1748
BstSFI CTRYAG 1 cut(s) 1634
BstSLI GKGCMC 1 cut(s) 1566
BstV1I GCAGC 2 cut(s) 89, 1620
BstV2I GAAGAC 2 cut(s) 79, 107
BstX2I RGATCY 4 cut(s) 182, 805, 1066, 1618
BstXI CCANNNNNNTGG 1 cut(s) 198
BstYI RGATCY 4 cut(s) 182, 805, 1066, 1618
BstZ17I GTATAC 2 cut(s) 531, 935
BsuRI GGCC 4 cut(s) 271, 1187, 1564, 1761
BtgI CCRYGG 1 cut(s) 816
BtsCI GGATG 6 cut(s) 203, 511, 518, 793, 1486, 1528
BtsIMutI CAGTG 5 cut(s) 77, 885, 966, 1043, 1378
Cac8I GCNNGC 1 cut(s) 100
CaiI CAGNNNCTG 2 cut(s) 1045, 1600
Cfr10I RCCGGY 1 cut(s) 98
Cfr13I GGNCC 5 cut(s) 269, 1144, 1562, 1563, 1760
CseI GACGC 2 cut(s) 101, 494
CviAII CATG 4 cut(s) 273, 822, 999, 1196
DdeI CTNAG 9 cut(s) 138, 639, 645, 989, 1016, 1287, 1293, 1629, 1800
DpnI GATC 7 cut(s) 69, 147, 171, 184, 807, 1068, 1620
DpnII GATC 7 cut(s) 67, 145, 169, 182, 805, 1066, 1618
EaeI YGGCCR 1 cut(s) 1185
Eam1104I CTCTTC 3 cut(s) 199, 489, 1164
EarI CTCTTC 3 cut(s) 199, 489, 1164
EciI GGCGGA 1 cut(s) 932
Ecl136II GAGCTC 2 cut(s) 1054, 1670
Eco130I CCWWGG 1 cut(s) 912
Eco24I GRGCYC 3 cut(s) 1056, 1566, 1672
Eco31I GGTCTC 1 cut(s) 1534
Eco32I GATATC 1 cut(s) 886
Eco47I GGWCC 1 cut(s) 1144
Eco53kI GAGCTC 2 cut(s) 1054, 1670
Eco57I CTGAAG 4 cut(s) 369, 408, 513, 1622
EcoICRI GAGCTC 2 cut(s) 1054, 1670
EcoO109I RGGNCCY 1 cut(s) 1563
EcoRII CCWGG 6 cut(s) 178, 193, 522, 1187, 1242, 1748
EcoRV GATATC 1 cut(s) 886
EcoT14I CCWWGG 1 cut(s) 912
EcoT22I ATGCAT 1 cut(s) 520
EcoT38I GRGCYC 3 cut(s) 1056, 1566, 1672
ErhI CCWWGG 1 cut(s) 912
Esp3I CGTCTC 1 cut(s) 922
FaeI CATG 4 cut(s) 276, 825, 1002, 1199
FalI AAGNNNNNCTT 2 cut(s) 1259, 1291
FaqI GGGAC 1 cut(s) 1492
FatI CATG 4 cut(s) 272, 821, 998, 1195
FblI GTMKAC 2 cut(s) 530, 934
Fnu4HI GCNGC 2 cut(s) 103, 1634
FokI GGATG 6 cut(s) 210, 505, 518, 800, 1493, 1535
FriOI GRGCYC 3 cut(s) 1056, 1566, 1672
Fsp4HI GCNGC 2 cut(s) 103, 1634
FspBI CTAG 4 cut(s) 578, 729, 1214, 1377
GluI GCNGC 2 cut(s) 103, 1634
GsuI CTGGAG 1 cut(s) 1067
HaeIII GGCC 4 cut(s) 271, 1187, 1564, 1761
HapII CCGG 2 cut(s) 99, 1567
HgaI GACGC 2 cut(s) 101, 494
Hin1I GRCGYC 1 cut(s) 112
Hin1II CATG 4 cut(s) 276, 825, 1002, 1199
HincII GTYRAC 1 cut(s) 1092
HindII GTYRAC 1 cut(s) 1092
HindIII AAGCTT 1 cut(s) 1604
HinfI GANTC 6 cut(s) 372, 859, 920, 1456, 1625, 1730
HpaII CCGG 2 cut(s) 99, 1567
HphI GGTGA 2 cut(s) 373, 1739
Hpy166II GTNNAC 3 cut(s) 531, 935, 1092
Hpy188I TCNGA 5 cut(s) 493, 505, 868, 1240, 1536
Hpy188III TCNNGA 8 cut(s) 167, 173, 230, 311, 449, 1057, 1622, 1707
Hpy8I GTNNAC 3 cut(s) 531, 935, 1092
Hpy99I CGWCG 2 cut(s) 386, 488
HpyAV CCTTC 6 cut(s) 344, 414, 1156, 1255, 1261, 1633
HpyCH4III ACNGT 5 cut(s) 94, 817, 880, 1373, 1590
HpyCH4IV ACGT 2 cut(s) 931, 1083
HpyF10VI GCNNNNNNNGC 3 cut(s) 1085, 1424, 1661
HpyF3I CTNAG 9 cut(s) 138, 639, 645, 989, 1016, 1287, 1293, 1629, 1800
HpySE526I ACGT 2 cut(s) 931, 1083
Hsp92I GRCGYC 1 cut(s) 112
Hsp92II CATG 4 cut(s) 276, 825, 1002, 1199
KroI GCCGGC 1 cut(s) 98
KroNI GCCGGC 1 cut(s) 100
Kzo9I GATC 7 cut(s) 67, 145, 169, 182, 805, 1066, 1618
LmnI GCTCC 6 cut(s) 134, 327, 1051, 1197, 1549, 1675
Lsp1109I GCAGC 2 cut(s) 89, 1620
MaeI CTAG 4 cut(s) 578, 729, 1214, 1377
MaeII ACGT 2 cut(s) 931, 1083
MaeIII GTNAC 6 cut(s) 149, 293, 479, 557, 826, 1041
MalI GATC 7 cut(s) 69, 147, 171, 184, 807, 1068, 1620
MboI GATC 7 cut(s) 67, 145, 169, 182, 805, 1066, 1618
MfeI CAATTG 1 cut(s) 106
MflI RGATCY 4 cut(s) 182, 805, 1066, 1618
MhlI GDGCHC 4 cut(s) 1056, 1252, 1566, 1672
MlsI TGGCCA 1 cut(s) 1187
MluCI AATT 4 cut(s) 29, 106, 215, 1006
MluNI TGGCCA 1 cut(s) 1187
MlyI GAGTC 1 cut(s) 366
MmeI TCCRAC 2 cut(s) 762, 1110
Mox20I TGGCCA 1 cut(s) 1187
Mph1103I ATGCAT 1 cut(s) 520
MroNI GCCGGC 1 cut(s) 98
MscI TGGCCA 1 cut(s) 1187
MseI TTAA 4 cut(s) 339, 1022, 1116, 1407
MslI CAYNNNNRTG 2 cut(s) 196, 959
Msp20I TGGCCA 1 cut(s) 1187
MspA1I CMGCKG 1 cut(s) 1633
MspI CCGG 2 cut(s) 99, 1567
MspR9I CCNGG 7 cut(s) 180, 195, 524, 1189, 1244, 1567, 1750
MunI CAATTG 1 cut(s) 106
Mva1269I GAATGC 2 cut(s) 589, 601
MvaI CCWGG 6 cut(s) 180, 195, 524, 1189, 1244, 1750
MwoI GCNNNNNNNGC 3 cut(s) 1085, 1424, 1661
NaeI GCCGGC 1 cut(s) 100
NciI CCSGG 1 cut(s) 1567
NdeII GATC 7 cut(s) 67, 145, 169, 182, 805, 1066, 1618
NgoMIV GCCGGC 1 cut(s) 98
NlaIII CATG 4 cut(s) 276, 825, 1002, 1199
NlaIV GGNNCC 5 cut(s) 426, 807, 1193, 1564, 1565
NmuCI GTSAC 3 cut(s) 479, 557, 1041
NsiI ATGCAT 1 cut(s) 520
NspI RCATGY 2 cut(s) 825, 1002
PctI GAATGC 2 cut(s) 589, 601
PdiI GCCGGC 1 cut(s) 100
PfeI GAWTC 5 cut(s) 859, 920, 1456, 1625, 1730
PflMI CCANNNNNTGG 1 cut(s) 1045
PkrI GCNGC 2 cut(s) 104, 1635
PleI GAGTC 1 cut(s) 366
PpsI GAGTC 1 cut(s) 366
PshAI GACNNNNGTC 1 cut(s) 564
Psp124BI GAGCTC 2 cut(s) 1056, 1672
Psp6I CCWGG 6 cut(s) 178, 193, 522, 1187, 1242, 1748
PspGI CCWGG 6 cut(s) 178, 193, 522, 1187, 1242, 1748
PspN4I GGNNCC 5 cut(s) 426, 807, 1193, 1564, 1565
PspOMI GGGCCC 1 cut(s) 1562
PspPI GGNCC 5 cut(s) 269, 1144, 1562, 1563, 1760
PstI CTGCAG 1 cut(s) 1638
PstNI CAGNNNCTG 2 cut(s) 1045, 1600
PsuI RGATCY 4 cut(s) 182, 805, 1066, 1618
PvuII CAGCTG 1 cut(s) 1633
RseI CAYNNNNRTG 2 cut(s) 196, 959
SacI GAGCTC 2 cut(s) 1056, 1672
SaqAI TTAA 4 cut(s) 339, 1022, 1116, 1407
SatI GCNGC 2 cut(s) 103, 1634
Sau3AI GATC 7 cut(s) 67, 145, 169, 182, 805, 1066, 1618
Sau96I GGNCC 5 cut(s) 269, 1144, 1562, 1563, 1760
SchI GAGTC 1 cut(s) 366
ScrFI CCNGG 7 cut(s) 180, 195, 524, 1189, 1244, 1567, 1750
SduI GDGCHC 4 cut(s) 1056, 1252, 1566, 1672
SfcI CTRYAG 1 cut(s) 1634
SinI GGWCC 1 cut(s) 1144
SmiMI CAYNNNNRTG 2 cut(s) 196, 959
SmlI CTYRAG 3 cut(s) 173, 447, 1099
SmoI CTYRAG 3 cut(s) 173, 447, 1099
Sse9I AATT 4 cut(s) 29, 106, 215, 1006
SsiI CCGC 2 cut(s) 917, 1256
SspMI CTAG 4 cut(s) 578, 729, 1214, 1377
SstI GAGCTC 2 cut(s) 1056, 1672
StyD4I CCNGG 7 cut(s) 178, 193, 522, 1187, 1242, 1565, 1748
StyI CCWWGG 1 cut(s) 912
TaaI ACNGT 5 cut(s) 94, 817, 880, 1373, 1590
TaiI ACGT 2 cut(s) 934, 1086
TaqI TCGA 6 cut(s) 282, 939, 1026, 1058, 1338, 1790
TasI AATT 4 cut(s) 29, 106, 215, 1006
TfiI GAWTC 5 cut(s) 859, 920, 1456, 1625, 1730
Tru1I TTAA 4 cut(s) 339, 1022, 1116, 1407
Tru9I TTAA 4 cut(s) 339, 1022, 1116, 1407
TscAI CASTG 5 cut(s) 77, 885, 966, 1050, 1378
TseFI GTSAC 3 cut(s) 479, 557, 1041
TseI GCWGC 2 cut(s) 102, 1633
Tsp45I GTSAC 3 cut(s) 479, 557, 1041
TspDTI ATGAA 9 cut(s) 432, 564, 675, 693, 761, 1019, 1077, 1323, 1341
TspGWI ACGGA 4 cut(s) 148, 750, 845, 1493
TspRI CASTG 5 cut(s) 77, 885, 966, 1050, 1378
Van91I CCANNNNNTGG 1 cut(s) 1045
VpaK11BI GGWCC 1 cut(s) 1144
XapI RAATTY 3 cut(s) 29, 215, 1006
XceI RCATGY 2 cut(s) 825, 1002
XmiI GTMKAC 2 cut(s) 530, 934
XspI CTAG 4 cut(s) 578, 729, 1214, 1377
Zsp2I ATGCAT 1 cut(s) 520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.