Protein pleiotropic regulatory locus
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF1997 | PF09366 | 73 - 229 | 1.9e-38 | Protein of unknown function (DUF1997) |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 562 |
| AcsI | RAATTY | 4 cut(s) | 142, 208, 280, 340 |
| AcuI | CTGAAG | 1 cut(s) | 270 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 361 |
| AflIII | ACRYGT | 1 cut(s) | 483 |
| AgsI | TTSAA | 5 cut(s) | 76, 95, 287, 340, 347 |
| AjnI | CCWGG | 1 cut(s) | 80 |
| AluBI | AGCT | 3 cut(s) | 175, 328, 590 |
| AluI | AGCT | 3 cut(s) | 175, 328, 590 |
| Alw21I | GWGCWC | 1 cut(s) | 274 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 248, 356, 437 |
| Ama87I | CYCGRG | 1 cut(s) | 548 |
| ApeKI | GCWGC | 4 cut(s) | 152, 175, 350, 655 |
| ApoI | RAATTY | 4 cut(s) | 142, 208, 280, 340 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 470, 502 |
| AspLEI | GCGC | 2 cut(s) | 204, 564 |
| AspS9I | GGNCC | 1 cut(s) | 640 |
| AsuC2I | CCSGG | 1 cut(s) | 603 |
| AsuHPI | GGTGA | 1 cut(s) | 535 |
| AvaI | CYCGRG | 1 cut(s) | 548 |
| AvaII | GGWCC | 1 cut(s) | 640 |
| Bbv12I | GWGCWC | 1 cut(s) | 274 |
| BbvI | GCAGC | 4 cut(s) | 139, 162, 362, 667 |
| BccI | CCATC | 3 cut(s) | 61, 182, 247 |
| BceAI | ACGGC | 1 cut(s) | 441 |
| BciT130I | CCWGG | 1 cut(s) | 82 |
| BcnI | CCSGG | 1 cut(s) | 603 |
| BfaI | CTAG | 1 cut(s) | 267 |
| BfmI | CTRYAG | 1 cut(s) | 653 |
| BglII | AGATCT | 1 cut(s) | 552 |
| BisI | GCNGC | 4 cut(s) | 153, 176, 351, 656 |
| BlsI | GCNGC | 4 cut(s) | 154, 177, 352, 657 |
| Bme1390I | CCNGG | 2 cut(s) | 82, 603 |
| Bme18I | GGWCC | 1 cut(s) | 640 |
| BmeT110I | CYCGRG | 1 cut(s) | 548 |
| BmgT120I | GGNCC | 1 cut(s) | 640 |
| BmiI | GGNNCC | 1 cut(s) | 642 |
| BmrFI | CCNGG | 2 cut(s) | 82, 603 |
| BmsI | GCATC | 5 cut(s) | 302, 396, 567, 606, 607 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 395, 427 |
| Bpu10I | CCTNAGC | 1 cut(s) | 293 |
| BpuMI | CCSGG | 1 cut(s) | 603 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 361 |
| Bse1I | ACTGG | 2 cut(s) | 279, 633 |
| BseBI | CCWGG | 1 cut(s) | 82 |
| BseGI | GGATG | 2 cut(s) | 53, 598 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 361 |
| BseNI | ACTGG | 2 cut(s) | 279, 633 |
| BseXI | GCAGC | 4 cut(s) | 139, 162, 362, 667 |
| Bsh1236I | CGCG | 1 cut(s) | 562 |
| BsiHKAI | GWGCWC | 1 cut(s) | 274 |
| BsiHKCI | CYCGRG | 1 cut(s) | 548 |
| BsiSI | CCGG | 1 cut(s) | 602 |
| BslFI | GGGAC | 2 cut(s) | 508, 626 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 361 |
| BsmFI | GGGAC | 2 cut(s) | 508, 626 |
| BsoBI | CYCGRG | 1 cut(s) | 548 |
| Bsp1286I | GDGCHC | 1 cut(s) | 274 |
| Bsp143I | GATC | 2 cut(s) | 552, 706 |
| BspFNI | CGCG | 1 cut(s) | 562 |
| BspLI | GGNNCC | 1 cut(s) | 642 |
| BspMAI | CTGCAG | 1 cut(s) | 657 |
| BsrI | ACTGG | 2 cut(s) | 279, 633 |
| BssMI | GATC | 2 cut(s) | 552, 706 |
| Bst2UI | CCWGG | 1 cut(s) | 82 |
| BstC8I | GCNNGC | 1 cut(s) | 621 |
| BstDEI | CTNAG | 4 cut(s) | 8, 196, 293, 610 |
| BstF5I | GGATG | 2 cut(s) | 53, 598 |
| BstFNI | CGCG | 1 cut(s) | 562 |
| BstHHI | GCGC | 2 cut(s) | 204, 564 |
| BstKTI | GATC | 2 cut(s) | 555, 709 |
| BstMBI | GATC | 2 cut(s) | 552, 706 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 137, 453, 655 |
| BstNI | CCWGG | 1 cut(s) | 82 |
| BstNSI | RCATGY | 1 cut(s) | 487 |
| BstSCI | CCNGG | 2 cut(s) | 80, 601 |
| BstSFI | CTRYAG | 1 cut(s) | 653 |
| BstUI | CGCG | 1 cut(s) | 562 |
| BstV1I | GCAGC | 4 cut(s) | 139, 162, 362, 667 |
| BstX2I | RGATCY | 1 cut(s) | 552 |
| BstYI | RGATCY | 1 cut(s) | 552 |
| BtsCI | GGATG | 2 cut(s) | 53, 598 |
| BtsI | GCAGTG | 1 cut(s) | 644 |
| BtsIMutI | CAGTG | 3 cut(s) | 272, 297, 644 |
| Cac8I | GCNNGC | 1 cut(s) | 621 |
| CaiI | CAGNNNCTG | 3 cut(s) | 248, 356, 437 |
| CfoI | GCGC | 2 cut(s) | 204, 564 |
| Cfr13I | GGNCC | 1 cut(s) | 640 |
| CviAII | CATG | 6 cut(s) | 23, 35, 256, 484, 574, 714 |
| CviJI | RGCY | 9 cut(s) | 39, 175, 234, 254, 328, 353, 456, 590, 637 |
| CviKI_1 | RGCY | 9 cut(s) | 39, 175, 234, 254, 328, 353, 456, 590, 637 |
| DdeI | CTNAG | 4 cut(s) | 8, 196, 293, 610 |
| DpnI | GATC | 2 cut(s) | 554, 708 |
| DpnII | GATC | 2 cut(s) | 552, 706 |
| Eco47I | GGWCC | 1 cut(s) | 640 |
| Eco57I | CTGAAG | 1 cut(s) | 270 |
| Eco88I | CYCGRG | 1 cut(s) | 548 |
| EcoRII | CCWGG | 1 cut(s) | 80 |
| FaeI | CATG | 6 cut(s) | 26, 38, 259, 487, 577, 717 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 693 |
| FaqI | GGGAC | 2 cut(s) | 508, 626 |
| FatI | CATG | 6 cut(s) | 22, 34, 255, 483, 573, 713 |
| Fnu4HI | GCNGC | 4 cut(s) | 153, 176, 351, 656 |
| FokI | GGATG | 2 cut(s) | 40, 585 |
| Fsp4HI | GCNGC | 4 cut(s) | 153, 176, 351, 656 |
| FspBI | CTAG | 1 cut(s) | 267 |
| GlaI | GCGC | 2 cut(s) | 203, 563 |
| GluI | GCNGC | 4 cut(s) | 153, 176, 351, 656 |
| HapII | CCGG | 1 cut(s) | 602 |
| HhaI | GCGC | 2 cut(s) | 204, 564 |
| Hin1II | CATG | 6 cut(s) | 26, 38, 259, 487, 577, 717 |
| Hin6I | GCGC | 2 cut(s) | 202, 562 |
| HinP1I | GCGC | 2 cut(s) | 202, 562 |
| HindIII | AAGCTT | 1 cut(s) | 326 |
| HinfI | GANTC | 4 cut(s) | 122, 434, 503, 509 |
| HpaII | CCGG | 1 cut(s) | 602 |
| HphI | GGTGA | 1 cut(s) | 535 |
| Hpy166II | GTNNAC | 2 cut(s) | 109, 376 |
| Hpy188I | TCNGA | 4 cut(s) | 121, 433, 508, 700 |
| Hpy188III | TCNNGA | 2 cut(s) | 243, 550 |
| Hpy8I | GTNNAC | 2 cut(s) | 109, 376 |
| HpyAV | CCTTC | 2 cut(s) | 82, 154 |
| HpyCH4V | TGCA | 6 cut(s) | 131, 155, 315, 417, 619, 655 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 137, 453, 655 |
| HpyF3I | CTNAG | 4 cut(s) | 8, 196, 293, 610 |
| Hsp92II | CATG | 6 cut(s) | 26, 38, 259, 487, 577, 717 |
| HspAI | GCGC | 2 cut(s) | 202, 562 |
| Kzo9I | GATC | 2 cut(s) | 552, 706 |
| Lsp1109I | GCAGC | 4 cut(s) | 139, 162, 362, 667 |
| LweI | GCATC | 5 cut(s) | 302, 396, 567, 606, 607 |
| MaeI | CTAG | 1 cut(s) | 267 |
| MaeIII | GTNAC | 2 cut(s) | 3, 191 |
| MalI | GATC | 2 cut(s) | 554, 708 |
| MboI | GATC | 2 cut(s) | 552, 706 |
| MboII | GAAGA | 4 cut(s) | 64, 97, 701, 713 |
| MflI | RGATCY | 1 cut(s) | 552 |
| MhlI | GDGCHC | 1 cut(s) | 274 |
| MluCI | AATT | 5 cut(s) | 142, 168, 208, 280, 340 |
| MlyI | GAGTC | 1 cut(s) | 497 |
| MnlI | CCTC | 3 cut(s) | 382, 418, 557 |
| MseI | TTAA | 5 cut(s) | 171, 230, 330, 368, 536 |
| MspA1I | CMGCKG | 1 cut(s) | 590 |
| MspI | CCGG | 1 cut(s) | 602 |
| MspR9I | CCNGG | 2 cut(s) | 82, 603 |
| MvaI | CCWGG | 1 cut(s) | 82 |
| MvnI | CGCG | 1 cut(s) | 562 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 137, 453, 655 |
| NciI | CCSGG | 1 cut(s) | 603 |
| NdeII | GATC | 2 cut(s) | 552, 706 |
| NlaIII | CATG | 6 cut(s) | 26, 38, 259, 487, 577, 717 |
| NlaIV | GGNNCC | 1 cut(s) | 642 |
| NmuCI | GTSAC | 1 cut(s) | 3 |
| NspI | RCATGY | 1 cut(s) | 487 |
| PaeR7I | CTCGAG | 1 cut(s) | 548 |
| PciI | ACATGT | 1 cut(s) | 483 |
| PfeI | GAWTC | 3 cut(s) | 122, 434, 509 |
| PfoI | TCCNGGA | 1 cut(s) | 601 |
| PkrI | GCNGC | 4 cut(s) | 154, 177, 352, 657 |
| PleI | GAGTC | 1 cut(s) | 497 |
| PpsI | GAGTC | 1 cut(s) | 497 |
| PscI | ACATGT | 1 cut(s) | 483 |
| Psp6I | CCWGG | 1 cut(s) | 80 |
| PspGI | CCWGG | 1 cut(s) | 80 |
| PspN4I | GGNNCC | 1 cut(s) | 642 |
| PspPI | GGNCC | 1 cut(s) | 640 |
| PstI | CTGCAG | 1 cut(s) | 657 |
| PstNI | CAGNNNCTG | 3 cut(s) | 248, 356, 437 |
| PsuI | RGATCY | 1 cut(s) | 552 |
| PvuII | CAGCTG | 1 cut(s) | 590 |
| SaqAI | TTAA | 5 cut(s) | 171, 230, 330, 368, 536 |
| SatI | GCNGC | 4 cut(s) | 153, 176, 351, 656 |
| Sau3AI | GATC | 2 cut(s) | 552, 706 |
| Sau96I | GGNCC | 1 cut(s) | 640 |
| SchI | GAGTC | 1 cut(s) | 497 |
| ScrFI | CCNGG | 2 cut(s) | 82, 603 |
| SduI | GDGCHC | 1 cut(s) | 274 |
| SetI | ASST | 4 cut(s) | 93, 177, 330, 592 |
| SfaNI | GCATC | 5 cut(s) | 302, 396, 567, 606, 607 |
| SfcI | CTRYAG | 1 cut(s) | 653 |
| Sfr274I | CTCGAG | 1 cut(s) | 548 |
| SinI | GGWCC | 1 cut(s) | 640 |
| SlaI | CTCGAG | 1 cut(s) | 548 |
| SmlI | CTYRAG | 1 cut(s) | 548 |
| SmoI | CTYRAG | 1 cut(s) | 548 |
| Sse9I | AATT | 5 cut(s) | 142, 168, 208, 280, 340 |
| SspMI | CTAG | 1 cut(s) | 267 |
| StyD4I | CCNGG | 2 cut(s) | 80, 601 |
| TaqI | TCGA | 1 cut(s) | 549 |
| TasI | AATT | 5 cut(s) | 142, 168, 208, 280, 340 |
| TfiI | GAWTC | 3 cut(s) | 122, 434, 509 |
| Tru1I | TTAA | 5 cut(s) | 171, 230, 330, 368, 536 |
| Tru9I | TTAA | 5 cut(s) | 171, 230, 330, 368, 536 |
| TscAI | CASTG | 3 cut(s) | 279, 304, 651 |
| TseFI | GTSAC | 1 cut(s) | 3 |
| TseI | GCWGC | 4 cut(s) | 152, 175, 350, 655 |
| Tsp45I | GTSAC | 1 cut(s) | 3 |
| TspDTI | ATGAA | 3 cut(s) | 36, 39, 677 |
| TspRI | CASTG | 3 cut(s) | 279, 304, 651 |
| VpaK11BI | GGWCC | 1 cut(s) | 640 |
| XapI | RAATTY | 4 cut(s) | 142, 208, 280, 340 |
| XceI | RCATGY | 1 cut(s) | 487 |
| XhoI | CTCGAG | 1 cut(s) | 548 |
| XspI | CTAG | 1 cut(s) | 267 |