MATH domain and coiled-coil domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 561 |
| AccI | GTMKAC | 1 cut(s) | 208 |
| AclWI | GGATC | 1 cut(s) | 173 |
| AcsI | RAATTY | 3 cut(s) | 679, 864, 893 |
| AcuI | CTGAAG | 1 cut(s) | 465 |
| AcyI | GRCGYC | 2 cut(s) | 109, 558 |
| AfaI | GTAC | 1 cut(s) | 432 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 63, 64, 308 |
| AgeI | ACCGGT | 1 cut(s) | 538 |
| AgsI | TTSAA | 7 cut(s) | 41, 136, 410, 572, 614, 869, 889 |
| AjnI | CCWGG | 3 cut(s) | 196, 301, 585 |
| AleI | CACNNNNGTG | 1 cut(s) | 32 |
| AluBI | AGCT | 6 cut(s) | 693, 727, 814, 923, 959, 965 |
| AluI | AGCT | 6 cut(s) | 693, 727, 814, 923, 959, 965 |
| Alw21I | GWGCWC | 1 cut(s) | 967 |
| Alw26I | GTCTC | 2 cut(s) | 524, 695 |
| AlwI | GGATC | 1 cut(s) | 173 |
| ApeKI | GCWGC | 1 cut(s) | 99 |
| ApoI | RAATTY | 3 cut(s) | 679, 864, 893 |
| AsiGI | ACCGGT | 1 cut(s) | 538 |
| AsuHPI | GGTGA | 3 cut(s) | 46, 158, 866 |
| AxyI | CCTNAGG | 1 cut(s) | 126 |
| BanII | GRGCYC | 1 cut(s) | 967 |
| BbsI | GAAGAC | 2 cut(s) | 45, 104 |
| Bbv12I | GWGCWC | 1 cut(s) | 967 |
| BbvCI | CCTCAGC | 1 cut(s) | 393 |
| BbvI | GCAGC | 1 cut(s) | 86 |
| BccI | CCATC | 2 cut(s) | 195, 347 |
| BciT130I | CCWGG | 3 cut(s) | 198, 303, 587 |
| BclI | TGATCA | 3 cut(s) | 148, 496, 522 |
| BcoDI | GTCTC | 2 cut(s) | 524, 695 |
| BfaI | CTAG | 5 cut(s) | 183, 425, 815, 875, 960 |
| BglII | AGATCT | 1 cut(s) | 739 |
| BisI | GCNGC | 1 cut(s) | 100 |
| BlpI | GCTNAGC | 1 cut(s) | 689 |
| BlsI | GCNGC | 1 cut(s) | 101 |
| Bme1390I | CCNGG | 3 cut(s) | 198, 303, 587 |
| BmrFI | CCNGG | 3 cut(s) | 198, 303, 587 |
| BpiI | GAAGAC | 2 cut(s) | 45, 104 |
| BpmI | CTGGAG | 1 cut(s) | 950 |
| Bpu10I | CCTNAGC | 1 cut(s) | 393 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 689 |
| BpuEI | CTTGAG | 1 cut(s) | 365 |
| BsaAI | YACGTR | 1 cut(s) | 772 |
| BsaBI | GATNNNNATC | 1 cut(s) | 495 |
| BsaHI | GRCGYC | 2 cut(s) | 109, 558 |
| BsaJI | CCNNGG | 1 cut(s) | 585 |
| BsaWI | WCCGGW | 2 cut(s) | 433, 538 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 692, 722 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 63, 64, 308 |
| Bse118I | RCCGGY | 1 cut(s) | 538 |
| Bse1I | ACTGG | 1 cut(s) | 856 |
| Bse21I | CCTNAGG | 1 cut(s) | 126 |
| Bse3DI | GCAATG | 3 cut(s) | 188, 327, 627 |
| Bse8I | GATNNNNATC | 1 cut(s) | 495 |
| BseBI | CCWGG | 3 cut(s) | 198, 303, 587 |
| BseDI | CCNNGG | 1 cut(s) | 585 |
| BseGI | GGATG | 3 cut(s) | 206, 619, 985 |
| BseJI | GATNNNNATC | 1 cut(s) | 495 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 63, 64, 308 |
| BseMI | GCAATG | 3 cut(s) | 188, 327, 627 |
| BseMII | CTCAG | 5 cut(s) | 117, 384, 653, 703, 734 |
| BseNI | ACTGG | 1 cut(s) | 856 |
| BseRI | GAGGAG | 2 cut(s) | 893, 957 |
| BseXI | GCAGC | 1 cut(s) | 86 |
| BshTI | ACCGGT | 1 cut(s) | 538 |
| BsiHKAI | GWGCWC | 1 cut(s) | 967 |
| BsiSI | CCGG | 2 cut(s) | 434, 539 |
| BslFI | GGGAC | 1 cut(s) | 56 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 63, 64, 308 |
| BsmAI | GTCTC | 2 cut(s) | 524, 695 |
| BsmFI | GGGAC | 1 cut(s) | 56 |
| Bsp1286I | GDGCHC | 1 cut(s) | 967 |
| Bsp143I | GATC | 6 cut(s) | 148, 178, 185, 496, 522, 739 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 689 |
| BspCNI | CTCAG | 5 cut(s) | 118, 385, 654, 702, 733 |
| BspPI | GGATC | 1 cut(s) | 173 |
| BsrDI | GCAATG | 3 cut(s) | 188, 327, 627 |
| BsrFI | RCCGGY | 1 cut(s) | 538 |
| BsrI | ACTGG | 1 cut(s) | 856 |
| BssAI | RCCGGY | 1 cut(s) | 538 |
| BssECI | CCNNGG | 1 cut(s) | 585 |
| BssMI | GATC | 6 cut(s) | 148, 178, 185, 496, 522, 739 |
| BssNI | GRCGYC | 2 cut(s) | 109, 558 |
| Bst2UI | CCWGG | 3 cut(s) | 198, 303, 587 |
| Bst6I | CTCTTC | 1 cut(s) | 441 |
| BstACI | GRCGYC | 2 cut(s) | 109, 558 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 758 |
| BstBAI | YACGTR | 1 cut(s) | 772 |
| BstC8I | GCNNGC | 1 cut(s) | 673 |
| BstDEI | CTNAG | 7 cut(s) | 126, 279, 393, 662, 689, 720, 910 |
| BstF5I | GGATG | 3 cut(s) | 206, 619, 985 |
| BstKTI | GATC | 6 cut(s) | 151, 181, 188, 499, 525, 742 |
| BstMAI | GTCTC | 2 cut(s) | 524, 695 |
| BstMBI | GATC | 6 cut(s) | 148, 178, 185, 496, 522, 739 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 758 |
| BstNI | CCWGG | 3 cut(s) | 198, 303, 587 |
| BstNSI | RCATGY | 2 cut(s) | 215, 675 |
| BstSCI | CCNGG | 3 cut(s) | 196, 301, 585 |
| BstV1I | GCAGC | 1 cut(s) | 86 |
| BstV2I | GAAGAC | 2 cut(s) | 45, 104 |
| BstX2I | RGATCY | 1 cut(s) | 739 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 201 |
| BstYI | RGATCY | 1 cut(s) | 739 |
| Bsu36I | CCTNAGG | 1 cut(s) | 126 |
| BtsCI | GGATG | 3 cut(s) | 206, 619, 985 |
| BtsIMutI | CAGTG | 1 cut(s) | 761 |
| Cac8I | GCNNGC | 1 cut(s) | 673 |
| Cfr10I | RCCGGY | 1 cut(s) | 538 |
| CseI | GACGC | 1 cut(s) | 98 |
| Csp6I | GTAC | 1 cut(s) | 431 |
| CspAI | ACCGGT | 1 cut(s) | 538 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 337, 372 |
| CviAII | CATG | 7 cut(s) | 30, 212, 344, 500, 553, 672, 676 |
| CviJI | RGCY | 9 cut(s) | 99, 176, 693, 727, 814, 860, 923, 959, 965 |
| CviKI_1 | RGCY | 9 cut(s) | 99, 176, 693, 727, 814, 860, 923, 959, 965 |
| CviQI | GTAC | 1 cut(s) | 431 |
| DdeI | CTNAG | 7 cut(s) | 126, 279, 393, 662, 689, 720, 910 |
| DpnI | GATC | 6 cut(s) | 150, 180, 187, 498, 524, 741 |
| DpnII | GATC | 6 cut(s) | 148, 178, 185, 496, 522, 739 |
| DraI | TTTAAA | 1 cut(s) | 790 |
| Eam1104I | CTCTTC | 1 cut(s) | 441 |
| EarI | CTCTTC | 1 cut(s) | 441 |
| Ecl136II | GAGCTC | 1 cut(s) | 965 |
| Eco24I | GRGCYC | 1 cut(s) | 967 |
| Eco53kI | GAGCTC | 1 cut(s) | 965 |
| Eco57I | CTGAAG | 1 cut(s) | 465 |
| Eco81I | CCTNAGG | 1 cut(s) | 126 |
| EcoICRI | GAGCTC | 1 cut(s) | 965 |
| EcoRI | GAATTC | 1 cut(s) | 864 |
| EcoRII | CCWGG | 3 cut(s) | 196, 301, 585 |
| EcoT22I | ATGCAT | 1 cut(s) | 677 |
| EcoT38I | GRGCYC | 1 cut(s) | 967 |
| FaeI | CATG | 7 cut(s) | 33, 215, 347, 503, 556, 675, 679 |
| FaqI | GGGAC | 1 cut(s) | 56 |
| FatI | CATG | 7 cut(s) | 29, 211, 343, 499, 552, 671, 675 |
| FbaI | TGATCA | 3 cut(s) | 148, 496, 522 |
| FblI | GTMKAC | 1 cut(s) | 208 |
| Fnu4HI | GCNGC | 1 cut(s) | 100 |
| FokI | GGATG | 2 cut(s) | 213, 606 |
| FriOI | GRGCYC | 1 cut(s) | 967 |
| Fsp4HI | GCNGC | 1 cut(s) | 100 |
| FspBI | CTAG | 5 cut(s) | 183, 425, 815, 875, 960 |
| GluI | GCNGC | 1 cut(s) | 100 |
| GsuI | CTGGAG | 1 cut(s) | 950 |
| HapII | CCGG | 2 cut(s) | 434, 539 |
| HgaI | GACGC | 1 cut(s) | 98 |
| Hin1I | GRCGYC | 2 cut(s) | 109, 558 |
| Hin1II | CATG | 7 cut(s) | 33, 215, 347, 503, 556, 675, 679 |
| HincII | GTYRAC | 1 cut(s) | 954 |
| HindII | GTYRAC | 1 cut(s) | 954 |
| HinfI | GANTC | 7 cut(s) | 37, 132, 298, 325, 440, 506, 532 |
| HpaI | GTTAAC | 1 cut(s) | 954 |
| HpaII | CCGG | 2 cut(s) | 434, 539 |
| HphI | GGTGA | 3 cut(s) | 46, 158, 866 |
| Hpy166II | GTNNAC | 4 cut(s) | 27, 209, 548, 954 |
| Hpy188I | TCNGA | 4 cut(s) | 250, 445, 663, 723 |
| Hpy188III | TCNNGA | 6 cut(s) | 125, 167, 382, 407, 623, 869 |
| Hpy8I | GTNNAC | 4 cut(s) | 27, 209, 548, 954 |
| HpyAV | CCTTC | 4 cut(s) | 84, 591, 829, 883 |
| HpyCH4IV | ACGT | 3 cut(s) | 217, 558, 771 |
| HpyCH4V | TGCA | 5 cut(s) | 102, 215, 632, 675, 761 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 758 |
| HpyF3I | CTNAG | 7 cut(s) | 126, 279, 393, 662, 689, 720, 910 |
| HpySE526I | ACGT | 3 cut(s) | 217, 558, 771 |
| Hsp92I | GRCGYC | 2 cut(s) | 109, 558 |
| Hsp92II | CATG | 7 cut(s) | 33, 215, 347, 503, 556, 675, 679 |
| Ksp22I | TGATCA | 3 cut(s) | 148, 496, 522 |
| KspAI | GTTAAC | 1 cut(s) | 954 |
| Kzo9I | GATC | 6 cut(s) | 148, 178, 185, 496, 522, 739 |
| LmnI | GCTCC | 1 cut(s) | 970 |
| Lsp1109I | GCAGC | 1 cut(s) | 86 |
| MaeI | CTAG | 5 cut(s) | 183, 425, 815, 875, 960 |
| MaeII | ACGT | 3 cut(s) | 217, 558, 771 |
| MaeIII | GTNAC | 1 cut(s) | 460 |
| MalI | GATC | 6 cut(s) | 150, 180, 187, 498, 524, 741 |
| MboI | GATC | 6 cut(s) | 148, 178, 185, 496, 522, 739 |
| MboII | GAAGA | 7 cut(s) | 45, 104, 458, 569, 749, 838, 854 |
| MflI | RGATCY | 1 cut(s) | 739 |
| MhlI | GDGCHC | 1 cut(s) | 967 |
| MluCI | AATT | 5 cut(s) | 83, 679, 864, 884, 893 |
| MlyI | GAGTC | 2 cut(s) | 515, 526 |
| MmeI | TCCRAC | 1 cut(s) | 783 |
| Mph1103I | ATGCAT | 1 cut(s) | 677 |
| MseI | TTAA | 8 cut(s) | 227, 237, 288, 695, 789, 897, 953, 991 |
| MslI | CAYNNNNRTG | 2 cut(s) | 32, 199 |
| MspI | CCGG | 2 cut(s) | 434, 539 |
| MspR9I | CCNGG | 3 cut(s) | 198, 303, 587 |
| MvaI | CCWGG | 3 cut(s) | 198, 303, 587 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 758 |
| NdeII | GATC | 6 cut(s) | 148, 178, 185, 496, 522, 739 |
| NlaIII | CATG | 7 cut(s) | 33, 215, 347, 503, 556, 675, 679 |
| NsiI | ATGCAT | 1 cut(s) | 677 |
| NspI | RCATGY | 2 cut(s) | 215, 675 |
| OliI | CACNNNNGTG | 1 cut(s) | 32 |
| PaeI | GCATGC | 1 cut(s) | 675 |
| PfeI | GAWTC | 5 cut(s) | 37, 132, 298, 325, 440 |
| PinAI | ACCGGT | 1 cut(s) | 538 |
| PkrI | GCNGC | 1 cut(s) | 101 |
| PleI | GAGTC | 2 cut(s) | 514, 526 |
| PpsI | GAGTC | 2 cut(s) | 514, 526 |
| Ppu21I | YACGTR | 1 cut(s) | 772 |
| Psp124BI | GAGCTC | 1 cut(s) | 967 |
| Psp6I | CCWGG | 3 cut(s) | 196, 301, 585 |
| PspGI | CCWGG | 3 cut(s) | 196, 301, 585 |
| PsuI | RGATCY | 1 cut(s) | 739 |
| RsaI | GTAC | 1 cut(s) | 432 |
| RsaNI | GTAC | 1 cut(s) | 431 |
| RseI | CAYNNNNRTG | 2 cut(s) | 32, 199 |
| SacI | GAGCTC | 1 cut(s) | 967 |
| SaqAI | TTAA | 8 cut(s) | 227, 237, 288, 695, 789, 897, 953, 991 |
| SatI | GCNGC | 1 cut(s) | 100 |
| Sau3AI | GATC | 6 cut(s) | 148, 178, 185, 496, 522, 739 |
| SchI | GAGTC | 2 cut(s) | 515, 526 |
| ScrFI | CCNGG | 3 cut(s) | 198, 303, 587 |
| SduI | GDGCHC | 1 cut(s) | 967 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 32, 199 |
| SmlI | CTYRAG | 1 cut(s) | 380 |
| SmoI | CTYRAG | 1 cut(s) | 380 |
| SphI | GCATGC | 1 cut(s) | 675 |
| Sse9I | AATT | 5 cut(s) | 83, 679, 864, 884, 893 |
| SspMI | CTAG | 5 cut(s) | 183, 425, 815, 875, 960 |
| SstI | GAGCTC | 1 cut(s) | 967 |
| StyD4I | CCNGG | 3 cut(s) | 196, 301, 585 |
| TaiI | ACGT | 3 cut(s) | 220, 561, 774 |
| TaqI | TCGA | 1 cut(s) | 862 |
| TasI | AATT | 5 cut(s) | 83, 679, 864, 884, 893 |
| TfiI | GAWTC | 5 cut(s) | 37, 132, 298, 325, 440 |
| Tru1I | TTAA | 8 cut(s) | 227, 237, 288, 695, 789, 897, 953, 991 |
| Tru9I | TTAA | 8 cut(s) | 227, 237, 288, 695, 789, 897, 953, 991 |
| TscAI | CASTG | 1 cut(s) | 768 |
| TseI | GCWGC | 1 cut(s) | 99 |
| TspDTI | ATGAA | 5 cut(s) | 332, 390, 488, 692, 750 |
| TspGWI | ACGGA | 1 cut(s) | 632 |
| TspRI | CASTG | 1 cut(s) | 768 |
| XapI | RAATTY | 3 cut(s) | 679, 864, 893 |
| XceI | RCATGY | 2 cut(s) | 215, 675 |
| XmiI | GTMKAC | 1 cut(s) | 208 |
| XspI | CTAG | 5 cut(s) | 183, 425, 815, 875, 960 |
| ZraI | GACGTC | 1 cut(s) | 559 |
| Zsp2I | ATGCAT | 1 cut(s) | 677 |