protein modification by small protein conjugation or removal
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 87, 90 |
| AclWI | GGATC | 1 cut(s) | 870 |
| AfaI | GTAC | 2 cut(s) | 271, 375 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 702 |
| AflIII | ACRYGT | 1 cut(s) | 751 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 188, 220 |
| AluBI | AGCT | 6 cut(s) | 235, 319, 471, 640, 682, 775 |
| AluI | AGCT | 6 cut(s) | 235, 319, 471, 640, 682, 775 |
| Alw21I | GWGCWC | 1 cut(s) | 237 |
| Alw26I | GTCTC | 6 cut(s) | 266, 465, 563, 588, 596, 609 |
| AlwI | GGATC | 1 cut(s) | 870 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 605 |
| Ama87I | CYCGRG | 2 cut(s) | 462, 743 |
| AseI | ATTAAT | 1 cut(s) | 546 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 384 |
| AsuHPI | GGTGA | 1 cut(s) | 541 |
| AvaI | CYCGRG | 2 cut(s) | 462, 743 |
| BanII | GRGCYC | 1 cut(s) | 237 |
| Bbv12I | GWGCWC | 1 cut(s) | 237 |
| BccI | CCATC | 2 cut(s) | 174, 716 |
| BceAI | ACGGC | 1 cut(s) | 552 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 217, 251 |
| BclI | TGATCA | 1 cut(s) | 351 |
| BcoDI | GTCTC | 6 cut(s) | 266, 465, 563, 588, 596, 609 |
| BfaI | CTAG | 1 cut(s) | 575 |
| BglII | AGATCT | 1 cut(s) | 844 |
| BisI | GCNGC | 1 cut(s) | 88 |
| BlsI | GCNGC | 1 cut(s) | 89 |
| BmcAI | AGTACT | 1 cut(s) | 375 |
| BmeT110I | CYCGRG | 2 cut(s) | 462, 743 |
| BmsI | GCATC | 2 cut(s) | 52, 83 |
| BpuEI | CTTGAG | 2 cut(s) | 704, 791 |
| BsaI | GGTCTC | 2 cut(s) | 266, 588 |
| BsaJI | CCNNGG | 3 cut(s) | 556, 587, 696 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 702 |
| Bse1I | ACTGG | 2 cut(s) | 523, 864 |
| Bse3DI | GCAATG | 1 cut(s) | 495 |
| BseDI | CCNNGG | 3 cut(s) | 556, 587, 696 |
| BseGI | GGATG | 4 cut(s) | 98, 185, 292, 487 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 702 |
| BseMI | GCAATG | 1 cut(s) | 495 |
| BseMII | CTCAG | 4 cut(s) | 137, 399, 467, 743 |
| BseNI | ACTGG | 2 cut(s) | 523, 864 |
| BseRI | GAGGAG | 2 cut(s) | 545, 701 |
| BsiHKAI | GWGCWC | 1 cut(s) | 237 |
| BsiHKCI | CYCGRG | 2 cut(s) | 462, 743 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 702 |
| BsmAI | GTCTC | 6 cut(s) | 266, 465, 563, 588, 596, 609 |
| BsmBI | CGTCTC | 1 cut(s) | 609 |
| Bso31I | GGTCTC | 2 cut(s) | 266, 588 |
| BsoBI | CYCGRG | 2 cut(s) | 462, 743 |
| Bsp1286I | GDGCHC | 1 cut(s) | 237 |
| Bsp143I | GATC | 4 cut(s) | 127, 351, 844, 862 |
| BspACI | CCGC | 2 cut(s) | 87, 90 |
| BspCNI | CTCAG | 4 cut(s) | 138, 400, 466, 742 |
| BspHI | TCATGA | 2 cut(s) | 10, 388 |
| BspPI | GGATC | 1 cut(s) | 870 |
| BspTNI | GGTCTC | 2 cut(s) | 266, 588 |
| BsrDI | GCAATG | 1 cut(s) | 495 |
| BsrI | ACTGG | 2 cut(s) | 523, 864 |
| BssECI | CCNNGG | 3 cut(s) | 556, 587, 696 |
| BssMI | GATC | 4 cut(s) | 127, 351, 844, 862 |
| BssT1I | CCWWGG | 1 cut(s) | 696 |
| Bst6I | CTCTTC | 1 cut(s) | 269 |
| BstC8I | GCNNGC | 2 cut(s) | 473, 638 |
| BstDEI | CTNAG | 5 cut(s) | 146, 408, 453, 611, 729 |
| BstDSI | CCRYGG | 1 cut(s) | 587 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 700 |
| BstF5I | GGATG | 4 cut(s) | 98, 185, 292, 487 |
| BstKTI | GATC | 4 cut(s) | 130, 354, 847, 865 |
| BstMAI | GTCTC | 6 cut(s) | 266, 465, 563, 588, 596, 609 |
| BstMBI | GATC | 4 cut(s) | 127, 351, 844, 862 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 93 |
| BstNSI | RCATGY | 1 cut(s) | 755 |
| BstX2I | RGATCY | 1 cut(s) | 844 |
| BstYI | RGATCY | 1 cut(s) | 844 |
| BtgI | CCRYGG | 1 cut(s) | 587 |
| BtsCI | GGATG | 4 cut(s) | 98, 185, 292, 487 |
| Cac8I | GCNNGC | 2 cut(s) | 473, 638 |
| CaiI | CAGNNNCTG | 1 cut(s) | 605 |
| CciI | TCATGA | 2 cut(s) | 10, 388 |
| CseI | GACGC | 1 cut(s) | 626 |
| Csp6I | GTAC | 2 cut(s) | 270, 374 |
| CviAII | CATG | 3 cut(s) | 11, 389, 752 |
| CviJI | RGCY | 9 cut(s) | 137, 235, 319, 471, 475, 640, 682, 775, 883 |
| CviKI_1 | RGCY | 9 cut(s) | 137, 235, 319, 471, 475, 640, 682, 775, 883 |
| CviQI | GTAC | 2 cut(s) | 270, 374 |
| DdeI | CTNAG | 5 cut(s) | 146, 408, 453, 611, 729 |
| DpnI | GATC | 4 cut(s) | 129, 353, 846, 864 |
| DpnII | GATC | 4 cut(s) | 127, 351, 844, 862 |
| Eam1104I | CTCTTC | 1 cut(s) | 269 |
| EarI | CTCTTC | 1 cut(s) | 269 |
| EciI | GGCGGA | 1 cut(s) | 105 |
| Ecl136II | GAGCTC | 1 cut(s) | 235 |
| Eco130I | CCWWGG | 1 cut(s) | 696 |
| Eco24I | GRGCYC | 1 cut(s) | 237 |
| Eco31I | GGTCTC | 2 cut(s) | 266, 588 |
| Eco32I | GATATC | 1 cut(s) | 69 |
| Eco53kI | GAGCTC | 1 cut(s) | 235 |
| Eco88I | CYCGRG | 2 cut(s) | 462, 743 |
| EcoICRI | GAGCTC | 1 cut(s) | 235 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 700 |
| EcoRV | GATATC | 1 cut(s) | 69 |
| EcoT14I | CCWWGG | 1 cut(s) | 696 |
| EcoT38I | GRGCYC | 1 cut(s) | 237 |
| ErhI | CCWWGG | 1 cut(s) | 696 |
| Esp3I | CGTCTC | 1 cut(s) | 609 |
| FaeI | CATG | 3 cut(s) | 14, 392, 755 |
| FaiI | YATR | 9 cut(s) | 12, 77, 83, 177, 390, 450, 541, 753, 895 |
| FatI | CATG | 3 cut(s) | 10, 388, 751 |
| FbaI | TGATCA | 1 cut(s) | 351 |
| Fnu4HI | GCNGC | 1 cut(s) | 88 |
| FokI | GGATG | 4 cut(s) | 105, 192, 279, 474 |
| FriOI | GRGCYC | 1 cut(s) | 237 |
| Fsp4HI | GCNGC | 1 cut(s) | 88 |
| FspBI | CTAG | 1 cut(s) | 575 |
| GluI | GCNGC | 1 cut(s) | 88 |
| HgaI | GACGC | 1 cut(s) | 626 |
| Hin1II | CATG | 3 cut(s) | 14, 392, 755 |
| HindIII | AAGCTT | 2 cut(s) | 317, 680 |
| HinfI | GANTC | 8 cut(s) | 7, 142, 157, 164, 217, 592, 654, 760 |
| HphI | GGTGA | 1 cut(s) | 541 |
| Hpy188I | TCNGA | 7 cut(s) | 147, 156, 512, 601, 721, 811, 867 |
| Hpy188III | TCNNGA | 6 cut(s) | 11, 161, 323, 389, 568, 757 |
| HpyAV | CCTTC | 4 cut(s) | 49, 251, 386, 406 |
| HpyCH4IV | ACGT | 1 cut(s) | 29 |
| HpyCH4V | TGCA | 1 cut(s) | 500 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 93 |
| HpyF3I | CTNAG | 5 cut(s) | 146, 408, 453, 611, 729 |
| HpySE526I | ACGT | 1 cut(s) | 29 |
| Hsp92II | CATG | 3 cut(s) | 14, 392, 755 |
| Ksp22I | TGATCA | 1 cut(s) | 351 |
| Kzo9I | GATC | 4 cut(s) | 127, 351, 844, 862 |
| LpnPI | CCDG | 9 cut(s) | 210, 440, 457, 536, 565, 636, 716, 761, 845 |
| LweI | GCATC | 2 cut(s) | 52, 83 |
| MaeI | CTAG | 1 cut(s) | 575 |
| MaeII | ACGT | 1 cut(s) | 29 |
| MaeIII | GTNAC | 2 cut(s) | 139, 400 |
| MalI | GATC | 4 cut(s) | 129, 353, 846, 864 |
| MboI | GATC | 4 cut(s) | 127, 351, 844, 862 |
| MboII | GAAGA | 6 cut(s) | 137, 256, 718, 749, 789, 799 |
| MflI | RGATCY | 1 cut(s) | 844 |
| MhlI | GDGCHC | 1 cut(s) | 237 |
| MluCI | AATT | 3 cut(s) | 120, 275, 852 |
| MlyI | GAGTC | 2 cut(s) | 136, 601 |
| MmeI | TCCRAC | 1 cut(s) | 807 |
| MroXI | GAANNNNTTC | 1 cut(s) | 384 |
| MseI | TTAA | 3 cut(s) | 546, 671, 792 |
| MspA1I | CMGCKG | 1 cut(s) | 471 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 93 |
| NdeII | GATC | 4 cut(s) | 127, 351, 844, 862 |
| NlaIII | CATG | 3 cut(s) | 14, 392, 755 |
| NmuCI | GTSAC | 1 cut(s) | 139 |
| NspI | RCATGY | 1 cut(s) | 755 |
| PaeR7I | CTCGAG | 1 cut(s) | 743 |
| PagI | TCATGA | 2 cut(s) | 10, 388 |
| PciI | ACATGT | 1 cut(s) | 751 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 26, 564, 624, 633 |
| PdmI | GAANNNNTTC | 1 cut(s) | 384 |
| PfeI | GAWTC | 6 cut(s) | 7, 157, 164, 217, 654, 760 |
| PkrI | GCNGC | 1 cut(s) | 89 |
| PleI | GAGTC | 2 cut(s) | 136, 600 |
| PpsI | GAGTC | 2 cut(s) | 136, 600 |
| PscI | ACATGT | 1 cut(s) | 751 |
| PshBI | ATTAAT | 1 cut(s) | 546 |
| Psp124BI | GAGCTC | 1 cut(s) | 237 |
| PspXI | VCTCGAGB | 1 cut(s) | 743 |
| PstNI | CAGNNNCTG | 1 cut(s) | 605 |
| PsuI | RGATCY | 1 cut(s) | 844 |
| PvuII | CAGCTG | 1 cut(s) | 471 |
| RsaI | GTAC | 2 cut(s) | 271, 375 |
| RsaNI | GTAC | 2 cut(s) | 270, 374 |
| SacI | GAGCTC | 1 cut(s) | 237 |
| SaqAI | TTAA | 3 cut(s) | 546, 671, 792 |
| SatI | GCNGC | 1 cut(s) | 88 |
| Sau3AI | GATC | 4 cut(s) | 127, 351, 844, 862 |
| ScaI | AGTACT | 1 cut(s) | 375 |
| SchI | GAGTC | 2 cut(s) | 136, 601 |
| SduI | GDGCHC | 1 cut(s) | 237 |
| SfaNI | GCATC | 2 cut(s) | 52, 83 |
| Sfr274I | CTCGAG | 1 cut(s) | 743 |
| SlaI | CTCGAG | 1 cut(s) | 743 |
| SmlI | CTYRAG | 3 cut(s) | 683, 743, 770 |
| SmoI | CTYRAG | 3 cut(s) | 683, 743, 770 |
| Sse9I | AATT | 3 cut(s) | 120, 275, 852 |
| SsiI | CCGC | 2 cut(s) | 87, 90 |
| SspI | AATATT | 1 cut(s) | 427 |
| SspMI | CTAG | 1 cut(s) | 575 |
| SstI | GAGCTC | 1 cut(s) | 237 |
| StyI | CCWWGG | 1 cut(s) | 696 |
| TaiI | ACGT | 1 cut(s) | 32 |
| TaqI | TCGA | 5 cut(s) | 237, 438, 567, 627, 744 |
| TaqII | GACCGA | 1 cut(s) | 548 |
| TasI | AATT | 3 cut(s) | 120, 275, 852 |
| TatI | WGTACW | 2 cut(s) | 269, 373 |
| TauI | GCSGC | 1 cut(s) | 90 |
| TfiI | GAWTC | 6 cut(s) | 7, 157, 164, 217, 654, 760 |
| Tru1I | TTAA | 3 cut(s) | 546, 671, 792 |
| Tru9I | TTAA | 3 cut(s) | 546, 671, 792 |
| TseFI | GTSAC | 1 cut(s) | 139 |
| Tsp45I | GTSAC | 1 cut(s) | 139 |
| TspDTI | ATGAA | 5 cut(s) | 70, 192, 196, 377, 405 |
| TspGWI | ACGGA | 1 cut(s) | 604 |
| VspI | ATTAAT | 1 cut(s) | 546 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 700 |
| XceI | RCATGY | 1 cut(s) | 755 |
| XhoI | CTCGAG | 1 cut(s) | 743 |
| XmnI | GAANNNNTTC | 1 cut(s) | 384 |
| XspI | CTAG | 1 cut(s) | 575 |
| ZrmI | AGTACT | 1 cut(s) | 375 |