protein modification by small protein conjugation or removal
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 923 |
| AciI | CCGC | 3 cut(s) | 401, 858, 923 |
| AclI | AACGTT | 1 cut(s) | 888 |
| AclWI | GGATC | 1 cut(s) | 920 |
| AcoI | YGGCCR | 2 cut(s) | 600, 855 |
| AcsI | RAATTY | 1 cut(s) | 81 |
| AcyI | GRCGYC | 1 cut(s) | 109 |
| AfaI | GTAC | 2 cut(s) | 578, 932 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 314 |
| AflII | CTTAAG | 1 cut(s) | 905 |
| AflIII | ACRYGT | 1 cut(s) | 21 |
| AgsI | TTSAA | 7 cut(s) | 68, 416, 568, 734, 821, 832, 960 |
| AjnI | CCWGG | 2 cut(s) | 307, 369 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 854, 886 |
| AleI | CACNNNNGTG | 2 cut(s) | 32, 286 |
| AluBI | AGCT | 5 cut(s) | 697, 752, 787, 824, 866 |
| AluI | AGCT | 5 cut(s) | 697, 752, 787, 824, 866 |
| Alw21I | GWGCWC | 2 cut(s) | 789, 812 |
| Alw26I | GTCTC | 1 cut(s) | 599 |
| AlwI | GGATC | 1 cut(s) | 920 |
| AoxI | GGCC | 3 cut(s) | 600, 669, 855 |
| ApeKI | GCWGC | 1 cut(s) | 99 |
| ApoI | RAATTY | 1 cut(s) | 81 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 835, 867 |
| AsuHPI | GGTGA | 4 cut(s) | 46, 385, 505, 515 |
| BanII | GRGCYC | 1 cut(s) | 789 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 560, 592 |
| BbsI | GAAGAC | 2 cut(s) | 575, 848 |
| Bbv12I | GWGCWC | 2 cut(s) | 789, 812 |
| BbvI | GCAGC | 1 cut(s) | 86 |
| BccI | CCATC | 3 cut(s) | 137, 201, 306 |
| BciT130I | CCWGG | 2 cut(s) | 309, 371 |
| BcoDI | GTCTC | 1 cut(s) | 599 |
| BfmI | CTRYAG | 1 cut(s) | 237 |
| BfrI | CTTAAG | 1 cut(s) | 905 |
| BisI | GCNGC | 2 cut(s) | 100, 858 |
| BlsI | GCNGC | 2 cut(s) | 101, 859 |
| Bme1390I | CCNGG | 2 cut(s) | 309, 371 |
| BmrFI | CCNGG | 2 cut(s) | 309, 371 |
| BmsI | GCATC | 5 cut(s) | 127, 424, 545, 643, 756 |
| BpiI | GAAGAC | 2 cut(s) | 575, 848 |
| BpuEI | CTTGAG | 1 cut(s) | 796 |
| BsaHI | GRCGYC | 1 cut(s) | 109 |
| BsaJI | CCNNGG | 1 cut(s) | 636 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 314 |
| Bse3DI | GCAATG | 1 cut(s) | 531 |
| BseBI | CCWGG | 2 cut(s) | 309, 371 |
| BseDI | CCNNGG | 1 cut(s) | 636 |
| BseGI | GGATG | 4 cut(s) | 212, 317, 646, 771 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 314 |
| BseMI | GCAATG | 1 cut(s) | 531 |
| BseMII | CTCAG | 1 cut(s) | 441 |
| BseXI | GCAGC | 1 cut(s) | 86 |
| BsgI | GTGCAG | 1 cut(s) | 596 |
| BshFI | GGCC | 3 cut(s) | 602, 671, 857 |
| BsiHKAI | GWGCWC | 2 cut(s) | 789, 812 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 314 |
| BsmAI | GTCTC | 1 cut(s) | 599 |
| BsnI | GGCC | 3 cut(s) | 602, 671, 857 |
| Bsp1286I | GDGCHC | 2 cut(s) | 789, 812 |
| Bsp1407I | TGTACA | 1 cut(s) | 930 |
| Bsp143I | GATC | 2 cut(s) | 643, 912 |
| BspACI | CCGC | 3 cut(s) | 401, 858, 923 |
| BspANI | GGCC | 3 cut(s) | 602, 671, 857 |
| BspCNI | CTCAG | 1 cut(s) | 442 |
| BspHI | TCATGA | 1 cut(s) | 942 |
| BspPI | GGATC | 1 cut(s) | 920 |
| BspQI | GCTCTTC | 1 cut(s) | 777 |
| BspTI | CTTAAG | 1 cut(s) | 905 |
| BsrBI | CCGCTC | 1 cut(s) | 923 |
| BsrDI | GCAATG | 1 cut(s) | 531 |
| BsrGI | TGTACA | 1 cut(s) | 930 |
| BssECI | CCNNGG | 1 cut(s) | 636 |
| BssMI | GATC | 2 cut(s) | 643, 912 |
| BssNI | GRCGYC | 1 cut(s) | 109 |
| Bst2UI | CCWGG | 2 cut(s) | 309, 371 |
| Bst4CI | ACNGT | 1 cut(s) | 509 |
| Bst6I | CTCTTC | 1 cut(s) | 777 |
| BstACI | GRCGYC | 1 cut(s) | 109 |
| BstAFI | CTTAAG | 1 cut(s) | 905 |
| BstAUI | TGTACA | 1 cut(s) | 930 |
| BstC8I | GCNNGC | 1 cut(s) | 219 |
| BstDEI | CTNAG | 1 cut(s) | 450 |
| BstF5I | GGATG | 4 cut(s) | 212, 317, 646, 771 |
| BstKTI | GATC | 2 cut(s) | 646, 915 |
| BstMAI | GTCTC | 1 cut(s) | 599 |
| BstMBI | GATC | 2 cut(s) | 643, 912 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 619, 863 |
| BstNI | CCWGG | 2 cut(s) | 309, 371 |
| BstNSI | RCATGY | 1 cut(s) | 221 |
| BstSCI | CCNGG | 2 cut(s) | 307, 369 |
| BstSFI | CTRYAG | 1 cut(s) | 237 |
| BstV1I | GCAGC | 1 cut(s) | 86 |
| BstV2I | GAAGAC | 2 cut(s) | 575, 848 |
| BstX2I | RGATCY | 1 cut(s) | 912 |
| BstYI | RGATCY | 1 cut(s) | 912 |
| BsuRI | GGCC | 3 cut(s) | 602, 671, 857 |
| BtsCI | GGATG | 4 cut(s) | 212, 317, 646, 771 |
| Cac8I | GCNNGC | 1 cut(s) | 219 |
| CciI | TCATGA | 1 cut(s) | 942 |
| CseI | GACGC | 1 cut(s) | 98 |
| Csp6I | GTAC | 2 cut(s) | 577, 931 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 343, 378 |
| CviAII | CATG | 6 cut(s) | 218, 388, 457, 580, 676, 943 |
| CviQI | GTAC | 2 cut(s) | 577, 931 |
| DdeI | CTNAG | 1 cut(s) | 450 |
| DpnI | GATC | 2 cut(s) | 645, 914 |
| DpnII | GATC | 2 cut(s) | 643, 912 |
| DraI | TTTAAA | 1 cut(s) | 475 |
| EaeI | YGGCCR | 2 cut(s) | 600, 855 |
| Eam1104I | CTCTTC | 1 cut(s) | 777 |
| EarI | CTCTTC | 1 cut(s) | 777 |
| Ecl136II | GAGCTC | 1 cut(s) | 787 |
| Eco24I | GRGCYC | 1 cut(s) | 789 |
| Eco32I | GATATC | 1 cut(s) | 463 |
| Eco53kI | GAGCTC | 1 cut(s) | 787 |
| EcoICRI | GAGCTC | 1 cut(s) | 787 |
| EcoRII | CCWGG | 2 cut(s) | 307, 369 |
| EcoRV | GATATC | 1 cut(s) | 463 |
| EcoT38I | GRGCYC | 1 cut(s) | 789 |
| FaeI | CATG | 6 cut(s) | 221, 391, 460, 583, 679, 946 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 899, 931 |
| FatI | CATG | 6 cut(s) | 217, 387, 456, 579, 675, 942 |
| Fnu4HI | GCNGC | 2 cut(s) | 100, 858 |
| FokI | GGATG | 4 cut(s) | 219, 324, 653, 778 |
| FriOI | GRGCYC | 1 cut(s) | 789 |
| Fsp4HI | GCNGC | 2 cut(s) | 100, 858 |
| GluI | GCNGC | 2 cut(s) | 100, 858 |
| HaeIII | GGCC | 3 cut(s) | 602, 671, 857 |
| HgaI | GACGC | 1 cut(s) | 98 |
| Hin1I | GRCGYC | 1 cut(s) | 109 |
| Hin1II | CATG | 6 cut(s) | 221, 391, 460, 583, 679, 946 |
| HincII | GTYRAC | 2 cut(s) | 133, 892 |
| HindII | GTYRAC | 2 cut(s) | 133, 892 |
| HinfI | GANTC | 7 cut(s) | 43, 191, 261, 366, 520, 607, 760 |
| HpaI | GTTAAC | 2 cut(s) | 133, 892 |
| HphI | GGTGA | 4 cut(s) | 46, 385, 505, 515 |
| Hpy166II | GTNNAC | 6 cut(s) | 27, 133, 376, 505, 892, 933 |
| Hpy188I | TCNGA | 6 cut(s) | 256, 352, 451, 637, 652, 765 |
| Hpy188III | TCNNGA | 5 cut(s) | 65, 125, 179, 204, 943 |
| Hpy8I | GTNNAC | 6 cut(s) | 27, 133, 376, 505, 892, 933 |
| Hpy99I | CGWCG | 1 cut(s) | 383 |
| HpyAV | CCTTC | 5 cut(s) | 210, 251, 495, 736, 829 |
| HpyCH4III | ACNGT | 1 cut(s) | 509 |
| HpyCH4IV | ACGT | 2 cut(s) | 23, 888 |
| HpyCH4V | TGCA | 8 cut(s) | 58, 102, 221, 274, 437, 536, 613, 769 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 619, 863 |
| HpyF3I | CTNAG | 1 cut(s) | 450 |
| HpySE526I | ACGT | 2 cut(s) | 23, 888 |
| Hsp92I | GRCGYC | 1 cut(s) | 109 |
| Hsp92II | CATG | 6 cut(s) | 221, 391, 460, 583, 679, 946 |
| KspAI | GTTAAC | 2 cut(s) | 133, 892 |
| Kzo9I | GATC | 2 cut(s) | 643, 912 |
| LguI | GCTCTTC | 1 cut(s) | 777 |
| LmnI | GCTCC | 2 cut(s) | 310, 871 |
| Lsp1109I | GCAGC | 1 cut(s) | 86 |
| LweI | GCATC | 5 cut(s) | 127, 424, 545, 643, 756 |
| MaeII | ACGT | 2 cut(s) | 23, 888 |
| MaeIII | GTNAC | 2 cut(s) | 146, 521 |
| MalI | GATC | 2 cut(s) | 645, 914 |
| MbiI | CCGCTC | 1 cut(s) | 923 |
| MboI | GATC | 2 cut(s) | 643, 912 |
| MboII | GAAGA | 7 cut(s) | 473, 580, 751, 758, 794, 844, 853 |
| MflI | RGATCY | 1 cut(s) | 912 |
| MhlI | GDGCHC | 2 cut(s) | 789, 812 |
| MluCI | AATT | 1 cut(s) | 81 |
| MlyI | GAGTC | 4 cut(s) | 200, 255, 529, 601 |
| MmeI | TCCRAC | 1 cut(s) | 687 |
| MnlI | CCTC | 4 cut(s) | 631, 772, 792, 947 |
| MseI | TTAA | 9 cut(s) | 39, 132, 243, 339, 474, 693, 882, 891, 906 |
| MslI | CAYNNNNRTG | 3 cut(s) | 32, 286, 944 |
| MspCI | CTTAAG | 1 cut(s) | 905 |
| MspR9I | CCNGG | 2 cut(s) | 309, 371 |
| MvaI | CCWGG | 2 cut(s) | 309, 371 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 619, 863 |
| NdeII | GATC | 2 cut(s) | 643, 912 |
| NlaIII | CATG | 6 cut(s) | 221, 391, 460, 583, 679, 946 |
| NmeAIII | GCCGAG | 1 cut(s) | 628 |
| NmuCI | GTSAC | 1 cut(s) | 521 |
| NspI | RCATGY | 1 cut(s) | 221 |
| OliI | CACNNNNGTG | 2 cut(s) | 32, 286 |
| PaeI | GCATGC | 1 cut(s) | 221 |
| PagI | TCATGA | 1 cut(s) | 942 |
| PciSI | GCTCTTC | 1 cut(s) | 777 |
| PfeI | GAWTC | 3 cut(s) | 43, 366, 760 |
| PflFI | GACNNNGTC | 1 cut(s) | 383 |
| PfoI | TCCNGGA | 1 cut(s) | 307 |
| PkrI | GCNGC | 2 cut(s) | 101, 859 |
| PleI | GAGTC | 4 cut(s) | 199, 255, 528, 601 |
| PpsI | GAGTC | 4 cut(s) | 199, 255, 528, 601 |
| Psp124BI | GAGCTC | 1 cut(s) | 789 |
| Psp1406I | AACGTT | 1 cut(s) | 888 |
| Psp6I | CCWGG | 2 cut(s) | 307, 369 |
| PspGI | CCWGG | 2 cut(s) | 307, 369 |
| PsuI | RGATCY | 1 cut(s) | 912 |
| PsyI | GACNNNGTC | 1 cut(s) | 383 |
| RsaI | GTAC | 2 cut(s) | 578, 932 |
| RsaNI | GTAC | 2 cut(s) | 577, 931 |
| RseI | CAYNNNNRTG | 3 cut(s) | 32, 286, 944 |
| SacI | GAGCTC | 1 cut(s) | 789 |
| SapI | GCTCTTC | 1 cut(s) | 777 |
| SaqAI | TTAA | 9 cut(s) | 39, 132, 243, 339, 474, 693, 882, 891, 906 |
| SatI | GCNGC | 2 cut(s) | 100, 858 |
| Sau3AI | GATC | 2 cut(s) | 643, 912 |
| SchI | GAGTC | 4 cut(s) | 200, 255, 529, 601 |
| ScrFI | CCNGG | 2 cut(s) | 309, 371 |
| SduI | GDGCHC | 2 cut(s) | 789, 812 |
| SfaNI | GCATC | 5 cut(s) | 127, 424, 545, 643, 756 |
| SfcI | CTRYAG | 1 cut(s) | 237 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 32, 286, 944 |
| SmlI | CTYRAG | 2 cut(s) | 811, 905 |
| SmoI | CTYRAG | 2 cut(s) | 811, 905 |
| SphI | GCATGC | 1 cut(s) | 221 |
| Sse9I | AATT | 1 cut(s) | 81 |
| SsiI | CCGC | 3 cut(s) | 401, 858, 923 |
| SstI | GAGCTC | 1 cut(s) | 789 |
| StyD4I | CCNGG | 2 cut(s) | 307, 369 |
| TaaI | ACNGT | 1 cut(s) | 509 |
| TaiI | ACGT | 2 cut(s) | 26, 891 |
| TasI | AATT | 1 cut(s) | 81 |
| TatI | WGTACW | 1 cut(s) | 930 |
| TauI | GCSGC | 1 cut(s) | 860 |
| TfiI | GAWTC | 3 cut(s) | 43, 366, 760 |
| Tru1I | TTAA | 9 cut(s) | 39, 132, 243, 339, 474, 693, 882, 891, 906 |
| Tru9I | TTAA | 9 cut(s) | 39, 132, 243, 339, 474, 693, 882, 891, 906 |
| TseFI | GTSAC | 1 cut(s) | 521 |
| TseI | GCWGC | 1 cut(s) | 99 |
| Tsp45I | GTSAC | 1 cut(s) | 521 |
| TspDTI | ATGAA | 4 cut(s) | 417, 596, 692, 943 |
| Tth111I | GACNNNGTC | 1 cut(s) | 383 |
| Vha464I | CTTAAG | 1 cut(s) | 905 |
| XapI | RAATTY | 1 cut(s) | 81 |
| XceI | RCATGY | 1 cut(s) | 221 |