ubiquitinyl hydrolase activity
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 455, 1234 |
| AccII | CGCG | 2 cut(s) | 440, 527 |
| AciI | CCGC | 6 cut(s) | 438, 440, 525, 569, 811, 1391 |
| AclWI | GGATC | 3 cut(s) | 145, 717, 821 |
| AcoI | YGGCCR | 1 cut(s) | 403 |
| AcsI | RAATTY | 5 cut(s) | 208, 914, 1116, 1272, 1586 |
| AcuI | CTGAAG | 4 cut(s) | 926, 1123, 1625, 1779 |
| AcyI | GRCGYC | 1 cut(s) | 456 |
| AfaI | GTAC | 3 cut(s) | 975, 1058, 1546 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 62, 477, 541 |
| AflIII | ACRYGT | 1 cut(s) | 976 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 850 |
| AjnI | CCWGG | 3 cut(s) | 44, 390, 571 |
| AleI | CACNNNNGTG | 1 cut(s) | 895 |
| Alw21I | GWGCWC | 3 cut(s) | 354, 1347, 1575 |
| Alw26I | GTCTC | 2 cut(s) | 57, 1208 |
| Alw44I | GTGCAC | 1 cut(s) | 350 |
| AlwI | GGATC | 3 cut(s) | 145, 717, 821 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 578 |
| Ama87I | CYCGRG | 1 cut(s) | 1727 |
| AoxI | GGCC | 3 cut(s) | 93, 403, 1486 |
| ApaLI | GTGCAC | 1 cut(s) | 350 |
| ApeKI | GCWGC | 5 cut(s) | 387, 584, 948, 1177, 1256 |
| ApoI | RAATTY | 5 cut(s) | 208, 914, 1116, 1272, 1586 |
| AspLEI | GCGC | 1 cut(s) | 458 |
| AspS9I | GGNCC | 3 cut(s) | 80, 1163, 1486 |
| AsuHPI | GGTGA | 2 cut(s) | 781, 809 |
| AvaI | CYCGRG | 1 cut(s) | 1727 |
| AvaII | GGWCC | 2 cut(s) | 80, 1163 |
| BaeGI | GKGCMC | 2 cut(s) | 354, 535 |
| BalI | TGGCCA | 1 cut(s) | 405 |
| BanI | GGYRCC | 2 cut(s) | 455, 1234 |
| BanII | GRGCYC | 4 cut(s) | 292, 1137, 1347, 1575 |
| Bbv12I | GWGCWC | 3 cut(s) | 354, 1347, 1575 |
| BbvI | GCAGC | 5 cut(s) | 374, 571, 960, 1189, 1268 |
| BccI | CCATC | 4 cut(s) | 60, 800, 1203, 1768 |
| BciT130I | CCWGG | 3 cut(s) | 46, 392, 573 |
| BciVI | GTATCC | 2 cut(s) | 445, 625 |
| BclI | TGATCA | 1 cut(s) | 934 |
| BcoDI | GTCTC | 2 cut(s) | 57, 1208 |
| BfaI | CTAG | 8 cut(s) | 425, 467, 636, 753, 879, 903, 1553, 1793 |
| BfoI | RGCGCY | 1 cut(s) | 459 |
| BfuI | GTATCC | 2 cut(s) | 445, 625 |
| BglII | AGATCT | 1 cut(s) | 1578 |
| BisI | GCNGC | 5 cut(s) | 388, 585, 949, 1178, 1257 |
| BlsI | GCNGC | 5 cut(s) | 389, 586, 950, 1179, 1258 |
| Bme1390I | CCNGG | 3 cut(s) | 46, 392, 573 |
| Bme18I | GGWCC | 2 cut(s) | 80, 1163 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 850 |
| BmeT110I | CYCGRG | 1 cut(s) | 1727 |
| BmgT120I | GGNCC | 3 cut(s) | 80, 1163, 1486 |
| BmiI | GGNNCC | 6 cut(s) | 81, 291, 457, 1134, 1164, 1236 |
| BmrFI | CCNGG | 3 cut(s) | 46, 392, 573 |
| BmsI | GCATC | 1 cut(s) | 488 |
| BpmI | CTGGAG | 2 cut(s) | 67, 1559 |
| BsaBI | GATNNNNATC | 1 cut(s) | 818 |
| BsaHI | GRCGYC | 1 cut(s) | 456 |
| BsaI | GGTCTC | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 8 cut(s) | 61, 438, 572, 1045, 1089, 1111, 1305, 1482 |
| BsaWI | WCCGGW | 1 cut(s) | 693 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 147, 174, 177, 204 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 62, 477, 541 |
| Bse1I | ACTGG | 3 cut(s) | 223, 416, 762 |
| Bse3DI | GCAATG | 2 cut(s) | 884, 1299 |
| Bse8I | GATNNNNATC | 1 cut(s) | 818 |
| BseBI | CCWGG | 3 cut(s) | 46, 392, 573 |
| BseDI | CCNNGG | 8 cut(s) | 61, 438, 572, 1045, 1089, 1111, 1305, 1482 |
| BseGI | GGATG | 3 cut(s) | 71, 503, 1687 |
| BseJI | GATNNNNATC | 1 cut(s) | 818 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 62, 477, 541 |
| BseMI | GCAATG | 2 cut(s) | 884, 1299 |
| BseMII | CTCAG | 2 cut(s) | 792, 1305 |
| BseNI | ACTGG | 3 cut(s) | 223, 416, 762 |
| BseRI | GAGGAG | 4 cut(s) | 41, 171, 282, 1784 |
| BseSI | GKGCMC | 2 cut(s) | 354, 535 |
| BseXI | GCAGC | 5 cut(s) | 374, 571, 960, 1189, 1268 |
| BseYI | CCCAGC | 2 cut(s) | 119, 194 |
| BsgI | GTGCAG | 3 cut(s) | 577, 967, 1196 |
| Bsh1236I | CGCG | 2 cut(s) | 440, 527 |
| BshFI | GGCC | 3 cut(s) | 95, 405, 1488 |
| BshNI | GGYRCC | 2 cut(s) | 455, 1234 |
| BsiHKAI | GWGCWC | 3 cut(s) | 354, 1347, 1575 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1727 |
| BsiSI | CCGG | 1 cut(s) | 694 |
| BslFI | GGGAC | 3 cut(s) | 1013, 1176, 1437 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 62, 477, 541 |
| BsmAI | GTCTC | 2 cut(s) | 57, 1208 |
| BsmFI | GGGAC | 3 cut(s) | 1013, 1176, 1437 |
| BsmI | GAATGC | 2 cut(s) | 1439, 1472 |
| BsnI | GGCC | 3 cut(s) | 95, 405, 1488 |
| Bso31I | GGTCTC | 1 cut(s) | 57 |
| BsoBI | CYCGRG | 1 cut(s) | 1727 |
| Bsp1286I | GDGCHC | 6 cut(s) | 292, 354, 535, 1137, 1347, 1575 |
| Bsp1407I | TGTACA | 2 cut(s) | 973, 1544 |
| Bsp143I | GATC | 6 cut(s) | 137, 709, 799, 813, 934, 1578 |
| Bsp19I | CCATGG | 2 cut(s) | 61, 1045 |
| BspACI | CCGC | 6 cut(s) | 438, 440, 525, 569, 811, 1391 |
| BspANI | GGCC | 3 cut(s) | 95, 405, 1488 |
| BspCNI | CTCAG | 2 cut(s) | 791, 1306 |
| BspFNI | CGCG | 2 cut(s) | 440, 527 |
| BspLI | GGNNCC | 6 cut(s) | 81, 291, 457, 1134, 1164, 1236 |
| BspPI | GGATC | 3 cut(s) | 145, 717, 821 |
| BspT107I | GGYRCC | 2 cut(s) | 455, 1234 |
| BspTNI | GGTCTC | 1 cut(s) | 57 |
| BsrDI | GCAATG | 2 cut(s) | 884, 1299 |
| BsrGI | TGTACA | 2 cut(s) | 973, 1544 |
| BsrI | ACTGG | 3 cut(s) | 223, 416, 762 |
| BssECI | CCNNGG | 8 cut(s) | 61, 438, 572, 1045, 1089, 1111, 1305, 1482 |
| BssMI | GATC | 6 cut(s) | 137, 709, 799, 813, 934, 1578 |
| BssNI | GRCGYC | 1 cut(s) | 456 |
| BssT1I | CCWWGG | 5 cut(s) | 61, 1045, 1089, 1305, 1482 |
| Bst2UI | CCWGG | 3 cut(s) | 46, 392, 573 |
| Bst4CI | ACNGT | 5 cut(s) | 41, 331, 452, 1004, 1112 |
| Bst6I | CTCTTC | 2 cut(s) | 1426, 1735 |
| BstACI | GRCGYC | 1 cut(s) | 456 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1478 |
| BstAUI | TGTACA | 2 cut(s) | 973, 1544 |
| BstC8I | GCNNGC | 2 cut(s) | 270, 1239 |
| BstDEI | CTNAG | 5 cut(s) | 482, 778, 928, 1028, 1314 |
| BstDSI | CCRYGG | 4 cut(s) | 61, 438, 1045, 1111 |
| BstF5I | GGATG | 3 cut(s) | 71, 503, 1687 |
| BstFNI | CGCG | 2 cut(s) | 440, 527 |
| BstH2I | RGCGCY | 1 cut(s) | 459 |
| BstHHI | GCGC | 1 cut(s) | 458 |
| BstKTI | GATC | 6 cut(s) | 140, 712, 802, 816, 937, 1581 |
| BstMAI | GTCTC | 2 cut(s) | 57, 1208 |
| BstMBI | GATC | 6 cut(s) | 137, 709, 799, 813, 934, 1578 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 200, 1094, 1478 |
| BstNI | CCWGG | 3 cut(s) | 46, 392, 573 |
| BstNSI | RCATGY | 1 cut(s) | 980 |
| BstSCI | CCNGG | 3 cut(s) | 44, 390, 571 |
| BstSLI | GKGCMC | 2 cut(s) | 354, 535 |
| BstUI | CGCG | 2 cut(s) | 440, 527 |
| BstV1I | GCAGC | 5 cut(s) | 374, 571, 960, 1189, 1268 |
| BstX2I | RGATCY | 2 cut(s) | 137, 1578 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 897, 1052 |
| BstYI | RGATCY | 2 cut(s) | 137, 1578 |
| BsuI | GTATCC | 2 cut(s) | 445, 625 |
| BsuRI | GGCC | 3 cut(s) | 95, 405, 1488 |
| BtgI | CCRYGG | 4 cut(s) | 61, 438, 1045, 1111 |
| BtsCI | GGATG | 3 cut(s) | 71, 503, 1687 |
| BtsI | GCAGTG | 2 cut(s) | 565, 1476 |
| BtsIMutI | CAGTG | 3 cut(s) | 565, 950, 1476 |
| Cac8I | GCNNGC | 2 cut(s) | 270, 1239 |
| CaiI | CAGNNNCTG | 1 cut(s) | 578 |
| CfoI | GCGC | 1 cut(s) | 458 |
| Cfr13I | GGNCC | 3 cut(s) | 80, 1163, 1486 |
| Cfr42I | CCGCGG | 1 cut(s) | 441 |
| Csp6I | GTAC | 3 cut(s) | 974, 1057, 1545 |
| CviQI | GTAC | 3 cut(s) | 974, 1057, 1545 |
| DdeI | CTNAG | 5 cut(s) | 482, 778, 928, 1028, 1314 |
| DinI | GGCGCC | 1 cut(s) | 457 |
| DpnI | GATC | 6 cut(s) | 139, 711, 801, 815, 936, 1580 |
| DpnII | GATC | 6 cut(s) | 137, 709, 799, 813, 934, 1578 |
| DriI | GACNNNNNGTC | 1 cut(s) | 850 |
| EaeI | YGGCCR | 1 cut(s) | 403 |
| Eam1104I | CTCTTC | 2 cut(s) | 1426, 1735 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 850 |
| EarI | CTCTTC | 2 cut(s) | 1426, 1735 |
| EciI | GGCGGA | 2 cut(s) | 558, 826 |
| Ecl136II | GAGCTC | 2 cut(s) | 1345, 1573 |
| Eco130I | CCWWGG | 5 cut(s) | 61, 1045, 1089, 1305, 1482 |
| Eco24I | GRGCYC | 4 cut(s) | 292, 1137, 1347, 1575 |
| Eco31I | GGTCTC | 1 cut(s) | 57 |
| Eco47I | GGWCC | 2 cut(s) | 80, 1163 |
| Eco53kI | GAGCTC | 2 cut(s) | 1345, 1573 |
| Eco57I | CTGAAG | 4 cut(s) | 926, 1123, 1625, 1779 |
| Eco88I | CYCGRG | 1 cut(s) | 1727 |
| EcoICRI | GAGCTC | 2 cut(s) | 1345, 1573 |
| EcoO109I | RGGNCCY | 2 cut(s) | 80, 1163 |
| EcoRII | CCWGG | 3 cut(s) | 44, 390, 571 |
| EcoT14I | CCWWGG | 5 cut(s) | 61, 1045, 1089, 1305, 1482 |
| EcoT38I | GRGCYC | 4 cut(s) | 292, 1137, 1347, 1575 |
| EgeI | GGCGCC | 1 cut(s) | 457 |
| EheI | GGCGCC | 1 cut(s) | 457 |
| ErhI | CCWWGG | 5 cut(s) | 61, 1045, 1089, 1305, 1482 |
| FaqI | GGGAC | 3 cut(s) | 1013, 1176, 1437 |
| FauI | CCCGC | 1 cut(s) | 532 |
| FauNDI | CATATG | 2 cut(s) | 1073, 1632 |
| FbaI | TGATCA | 1 cut(s) | 934 |
| Fnu4HI | GCNGC | 5 cut(s) | 388, 585, 949, 1178, 1257 |
| FokI | GGATG | 3 cut(s) | 78, 510, 1694 |
| FriOI | GRGCYC | 4 cut(s) | 292, 1137, 1347, 1575 |
| Fsp4HI | GCNGC | 5 cut(s) | 388, 585, 949, 1178, 1257 |
| FspBI | CTAG | 8 cut(s) | 425, 467, 636, 753, 879, 903, 1553, 1793 |
| GlaI | GCGC | 1 cut(s) | 457 |
| GluI | GCNGC | 5 cut(s) | 388, 585, 949, 1178, 1257 |
| GsaI | CCCAGC | 2 cut(s) | 123, 198 |
| GsuI | CTGGAG | 2 cut(s) | 67, 1559 |
| HaeII | RGCGCY | 1 cut(s) | 459 |
| HaeIII | GGCC | 3 cut(s) | 95, 405, 1488 |
| HapII | CCGG | 1 cut(s) | 694 |
| HhaI | GCGC | 1 cut(s) | 458 |
| Hin1I | GRCGYC | 1 cut(s) | 456 |
| Hin6I | GCGC | 1 cut(s) | 456 |
| HinP1I | GCGC | 1 cut(s) | 456 |
| HindIII | AAGCTT | 3 cut(s) | 239, 491, 1380 |
| HpaII | CCGG | 1 cut(s) | 694 |
| HphI | GGTGA | 2 cut(s) | 781, 809 |
| Hpy166II | GTNNAC | 4 cut(s) | 352, 547, 662, 1229 |
| Hpy188I | TCNGA | 5 cut(s) | 137, 672, 781, 1267, 1315 |
| Hpy188III | TCNNGA | 9 cut(s) | 548, 605, 713, 753, 803, 903, 1141, 1193, 1576 |
| Hpy8I | GTNNAC | 4 cut(s) | 352, 547, 662, 1229 |
| HpyAV | CCTTC | 7 cut(s) | 524, 667, 775, 1138, 1147, 1176, 1754 |
| HpyCH4III | ACNGT | 5 cut(s) | 41, 331, 452, 1004, 1112 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 200, 1094, 1478 |
| HpyF3I | CTNAG | 5 cut(s) | 482, 778, 928, 1028, 1314 |
| Hsp92I | GRCGYC | 1 cut(s) | 456 |
| HspAI | GCGC | 1 cut(s) | 456 |
| KasI | GGCGCC | 1 cut(s) | 455 |
| Ksp22I | TGATCA | 1 cut(s) | 934 |
| KspI | CCGCGG | 1 cut(s) | 441 |
| Kzo9I | GATC | 6 cut(s) | 137, 709, 799, 813, 934, 1578 |
| LmnI | GCTCC | 9 cut(s) | 28, 144, 265, 295, 394, 571, 1132, 1578, 1789 |
| Lsp1109I | GCAGC | 5 cut(s) | 374, 571, 960, 1189, 1268 |
| LweI | GCATC | 1 cut(s) | 488 |
| MaeI | CTAG | 8 cut(s) | 425, 467, 636, 753, 879, 903, 1553, 1793 |
| MaeIII | GTNAC | 4 cut(s) | 17, 308, 590, 1415 |
| MalI | GATC | 6 cut(s) | 139, 711, 801, 815, 936, 1580 |
| MboI | GATC | 6 cut(s) | 137, 709, 799, 813, 934, 1578 |
| MboII | GAAGA | 6 cut(s) | 610, 655, 700, 1413, 1573, 1752 |
| MflI | RGATCY | 2 cut(s) | 137, 1578 |
| MhlI | GDGCHC | 6 cut(s) | 292, 354, 535, 1137, 1347, 1575 |
| MlsI | TGGCCA | 1 cut(s) | 405 |
| MluNI | TGGCCA | 1 cut(s) | 405 |
| Mly113I | GGCGCC | 1 cut(s) | 456 |
| MlyI | GAGTC | 2 cut(s) | 133, 305 |
| MmeI | TCCRAC | 1 cut(s) | 15 |
| Mox20I | TGGCCA | 1 cut(s) | 405 |
| MscI | TGGCCA | 1 cut(s) | 405 |
| MseI | TTAA | 5 cut(s) | 111, 326, 381, 923, 1521 |
| MslI | CAYNNNNRTG | 2 cut(s) | 895, 1050 |
| Msp20I | TGGCCA | 1 cut(s) | 405 |
| MspA1I | CMGCKG | 3 cut(s) | 440, 1337, 1393 |
| MspI | CCGG | 1 cut(s) | 694 |
| MspR9I | CCNGG | 3 cut(s) | 46, 392, 573 |
| Mva1269I | GAATGC | 2 cut(s) | 1439, 1472 |
| MvaI | CCWGG | 3 cut(s) | 46, 392, 573 |
| MvnI | CGCG | 2 cut(s) | 440, 527 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 200, 1094, 1478 |
| NarI | GGCGCC | 1 cut(s) | 456 |
| NcoI | CCATGG | 2 cut(s) | 61, 1045 |
| NdeI | CATATG | 2 cut(s) | 1073, 1632 |
| NdeII | GATC | 6 cut(s) | 137, 709, 799, 813, 934, 1578 |
| NlaIV | GGNNCC | 6 cut(s) | 81, 291, 457, 1134, 1164, 1236 |
| NmeAIII | GCCGAG | 1 cut(s) | 1514 |
| NmuCI | GTSAC | 2 cut(s) | 308, 1415 |
| NspI | RCATGY | 1 cut(s) | 980 |
| OliI | CACNNNNGTG | 1 cut(s) | 895 |
| PaeR7I | CTCGAG | 1 cut(s) | 1727 |
| PciI | ACATGT | 1 cut(s) | 976 |
| PctI | GAATGC | 2 cut(s) | 1439, 1472 |
| PfeI | GAWTC | 8 cut(s) | 132, 340, 601, 622, 646, 667, 716, 1310 |
| PfoI | TCCNGGA | 1 cut(s) | 44 |
| PkrI | GCNGC | 5 cut(s) | 389, 586, 950, 1179, 1258 |
| PleI | GAGTC | 2 cut(s) | 132, 305 |
| PluTI | GGCGCC | 1 cut(s) | 459 |
| PpsI | GAGTC | 2 cut(s) | 132, 305 |
| PpuMI | RGGWCCY | 2 cut(s) | 80, 1163 |
| PscI | ACATGT | 1 cut(s) | 976 |
| Psp124BI | GAGCTC | 2 cut(s) | 1347, 1575 |
| Psp5II | RGGWCCY | 2 cut(s) | 80, 1163 |
| Psp6I | CCWGG | 3 cut(s) | 44, 390, 571 |
| PspFI | CCCAGC | 2 cut(s) | 119, 194 |
| PspGI | CCWGG | 3 cut(s) | 44, 390, 571 |
| PspN4I | GGNNCC | 6 cut(s) | 81, 291, 457, 1134, 1164, 1236 |
| PspPI | GGNCC | 3 cut(s) | 80, 1163, 1486 |
| PspPPI | RGGWCCY | 2 cut(s) | 80, 1163 |
| PspXI | VCTCGAGB | 1 cut(s) | 1727 |
| PstNI | CAGNNNCTG | 1 cut(s) | 578 |
| PsuI | RGATCY | 2 cut(s) | 137, 1578 |
| PvuII | CAGCTG | 1 cut(s) | 1337 |
| RsaI | GTAC | 3 cut(s) | 975, 1058, 1546 |
| RsaNI | GTAC | 3 cut(s) | 974, 1057, 1545 |
| RseI | CAYNNNNRTG | 2 cut(s) | 895, 1050 |
| SacI | GAGCTC | 2 cut(s) | 1347, 1575 |
| SacII | CCGCGG | 1 cut(s) | 441 |
| SaqAI | TTAA | 5 cut(s) | 111, 326, 381, 923, 1521 |
| SatI | GCNGC | 5 cut(s) | 388, 585, 949, 1178, 1257 |
| Sau3AI | GATC | 6 cut(s) | 137, 709, 799, 813, 934, 1578 |
| Sau96I | GGNCC | 3 cut(s) | 80, 1163, 1486 |
| SchI | GAGTC | 2 cut(s) | 133, 305 |
| ScrFI | CCNGG | 3 cut(s) | 46, 392, 573 |
| SduI | GDGCHC | 6 cut(s) | 292, 354, 535, 1137, 1347, 1575 |
| SfaNI | GCATC | 1 cut(s) | 488 |
| SfoI | GGCGCC | 1 cut(s) | 457 |
| Sfr274I | CTCGAG | 1 cut(s) | 1727 |
| Sfr303I | CCGCGG | 1 cut(s) | 441 |
| SgrBI | CCGCGG | 1 cut(s) | 441 |
| SinI | GGWCC | 2 cut(s) | 80, 1163 |
| SlaI | CTCGAG | 1 cut(s) | 1727 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 895, 1050 |
| SmlI | CTYRAG | 1 cut(s) | 1727 |
| SmoI | CTYRAG | 1 cut(s) | 1727 |
| SsiI | CCGC | 6 cut(s) | 438, 440, 525, 569, 811, 1391 |
| SspDI | GGCGCC | 1 cut(s) | 455 |
| SspMI | CTAG | 8 cut(s) | 425, 467, 636, 753, 879, 903, 1553, 1793 |
| SstI | GAGCTC | 2 cut(s) | 1347, 1575 |
| StyD4I | CCNGG | 3 cut(s) | 44, 390, 571 |
| StyI | CCWWGG | 5 cut(s) | 61, 1045, 1089, 1305, 1482 |
| TaaI | ACNGT | 5 cut(s) | 41, 331, 452, 1004, 1112 |
| TaqI | TCGA | 3 cut(s) | 303, 1464, 1728 |
| TatI | WGTACW | 2 cut(s) | 973, 1544 |
| TfiI | GAWTC | 8 cut(s) | 132, 340, 601, 622, 646, 667, 716, 1310 |
| Tru1I | TTAA | 5 cut(s) | 111, 326, 381, 923, 1521 |
| Tru9I | TTAA | 5 cut(s) | 111, 326, 381, 923, 1521 |
| TscAI | CASTG | 3 cut(s) | 565, 950, 1483 |
| TseFI | GTSAC | 2 cut(s) | 308, 1415 |
| TseI | GCWGC | 5 cut(s) | 387, 584, 948, 1177, 1256 |
| Tsp45I | GTSAC | 2 cut(s) | 308, 1415 |
| TspDTI | ATGAA | 9 cut(s) | 189, 353, 503, 611, 701, 1401, 1416, 1457, 1649 |
| TspRI | CASTG | 3 cut(s) | 565, 950, 1483 |
| VneI | GTGCAC | 1 cut(s) | 350 |
| VpaK11BI | GGWCC | 2 cut(s) | 80, 1163 |
| XapI | RAATTY | 5 cut(s) | 208, 914, 1116, 1272, 1586 |
| XbaI | TCTAGA | 2 cut(s) | 752, 902 |
| XceI | RCATGY | 1 cut(s) | 980 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 398 |
| XhoI | CTCGAG | 1 cut(s) | 1727 |
| XspI | CTAG | 8 cut(s) | 425, 467, 636, 753, 879, 903, 1553, 1793 |