Rorug01G0087100

MATH domain and coiled-coil domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
14111147 .. 14113235
2089 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0087100.1

Sequence Viewer

Length: 996 bp
ATGGAGAACATAAGCAATATTCCGGAGTTGGCGCTAACCGTCGTCCCAAATAGTATTGCAAGTGATAAAAGCAGTATTCCGGTGCTAGGTTTAGGAACGGCTGCATATCCTTTTGTTGCCTCTGAAGTAGCAAAAGAAGCCATTCTCACTGCAATCAAAGTCGGCTACAGACATTTTGATACCGCTGCTGTTTACCAGACGGAGCCAGTTCTTGGTGAAGCCATTGCCGAAGCTCTTTCACTTGGCCTCGTCAAATCCCGGGATGAGCTTTTTGTTACTTCCAAGCTTTGGTGCACGGATGCACACCATCACCTTGTCCTGCCTGCCATTCATAAAACACTCGAGAATCTAGGATTGGAATACCTAGATTTGTATCTCATTCATTGGCCTATGAGTATGGAGCCGGCGGAAAGCTATGACATACTTTTTAAGAAAGAGCATTTTCTTCCTATGGACTTCAAGTCGGTGTGGGAAGCAATGGAAGAGTGCCAGAAGCTAGGCCTCACCAAGGCAATAGGAGTCAGCAATTTCTCATGCAAAAAGATTGAAATCTTGCTTTCCACTGCAAAAATCCCTCCTGCAGTCAACCAAGTGGAGATGAACCCGCTATGGCAGCAGAAAAAGCTGAGAGAGTTTTGTGAAAGAAAAGGTATAATCATCACTGCCTACTCTCCTTTGGGGGCAAAAGGGACACCGTGGGGAACAAATGGAGTGATGGAATGTGAGACGCTCAAACAAATTGCTGAAGCAAAAAGGAAAACTCTTGCTCAGGTTTGTCTGAGATGGGCATATGAGCAAGGGGTGAGTGTGGTGGTGAAGAGCTTTAACAAAGAGAGGATGAAGGAAAATATGGACATATTTGAATGGGAGCTGCTGCCTGAGGAAGTTGACAAGATCAATCAAATTCCGCAAAAGAGAGGATGTCAAGCATCCGAGTTGGTTTCAGATAATGGCCCTTTCAAGTCTCTAGAAGAGGTTTGGGATGGAGATATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

331

Amino Acids

37.14

Weight (kDa)

5.34

Isoelectric Point (pI)

36.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 29 - 302 2.4e-58 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000025)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31370 AT1G31380 AT1G31390 AT1G31400 AT2G01790 AT2G05400 AT2G05400 AT2G05400 AT2G05410 AT2G05410 AT2G05420 AT2G05430 AT2G42455 AT2G42460 AT2G42465 AT2G42470 AT2G42475 AT2G42480 AT3G27040 AT3G29580 AT3G44790 AT3G44800 AT3G44805 AT3G58200 AT3G58210 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58220 AT3G58230 AT3G58240 AT3G58250 AT3G58260 AT3G58270 AT3G58270 AT3G58270 AT3G58280 AT3G58290 AT3G58290 AT3G58290 AT3G58300 AT3G58320 AT3G58330 AT3G58340 AT3G58340 AT3G58350 AT3G58350 AT3G58360 AT3G58370 AT3G58380 AT3G58400 AT3G58410 AT3G58410 AT3G58430 AT3G58430 AT3G58440 AT5G03550
fragaria_vesca FvH4_2g00084 FvH4_2g15701 FvH4_2g24334 FvH4_3g23322 FvH4_3g23322 FvH4_3g23322 FvH4_3g23482 FvH4_3g23482 FvH4_3g23482 FvH4_3g23491 FvH4_3g23492 FvH4_3g23510 FvH4_3g23520 FvH4_3g23520 FvH4_3g23520 FvH4_3g23580 FvH4_3g38842 FvH4_4g10396 FvH4_5g29370 FvH4_5g32130 FvH4_7g04570 FvH4_7g04571 FvH4_7g04741 FvH4_7g04741 FvH4_7g04750 FvH4_7g04750 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04760 FvH4_7g04770 FvH4_7g04770 FvH4_7g04770
malus_domestica MD00G1065000.v1.1 MD00G1065300.v1.1 MD02G1267400.v1.1 MD02G1267600.v1.1 MD02G1267700.v1.1 MD02G1267800.v1.1 MD02G1268100.v1.1 MD02G1268300.v1.1 MD02G1268400.v1.1 MD02G1268500.v1.1 MD03G1193600.v1.1 MD05G1071400.v1.1 MD07G1051000.v1.1 MD07G1051100.v1.1 MD07G1051200.v1.1 MD07G1051300.v1.1 MD07G1051500.v1.1 MD07G1051700.v1.1 MD07G1051800.v1.1 MD07G1085400.v1.1 MD07G1085500.v1.1 MD11G1177200.v1.1 MD11G1209800.v1.1 MD11G1209900.v1.1 MD11G1210000.v1.1 MD12G1048100.v1.1 MD12G1048600.v1.1 MD14G1046700.v1.1 MD14G1047400.v1.1
prunus_persica Prupe.2G051200_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052500_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052600_v2.0.a1 Prupe.2G052700_v2.0.a1 Prupe.2G052800_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G052900_v2.0.a1 Prupe.2G053100_v2.0.a1 Prupe.2G053300_v2.0.a1 Prupe.2G054800_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G054900_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.2G069300_v2.0.a1 Prupe.4G223300_v2.0.a1 Prupe.4G223300_v2.0.a1
pyrus_communis pycom01g04720 pycom02g22950 pycom02g22960 pycom02g22970 pycom02g22990 pycom02g23000 pycom02g23010 pycom03g14600 pycom03g14610 pycom05g06150 pycom07g03820 pycom07g03830 pycom07g03850 pycom07g03860 pycom07g03880 pycom07g03890 pycom07g03900 pycom07g04000 pycom07g04010 pycom11g18540 pycom11g18560 pycom12g04190 pycom17g19100
rosa_chinensis RchiOBHm_Chr0c19g0500051 RchiOBHm_Chr1g0330011 RchiOBHm_Chr1g0330031 RchiOBHm_Chr1g0330041 RchiOBHm_Chr1g0330121 RchiOBHm_Chr1g0330141 RchiOBHm_Chr1g0330151 RchiOBHm_Chr1g0330181 RchiOBHm_Chr1g0330191 RchiOBHm_Chr1g0330201 RchiOBHm_Chr1g0330211 RchiOBHm_Chr1g0330221 RchiOBHm_Chr1g0367471 RchiOBHm_Chr2g0113311 RchiOBHm_Chr2g0148281 RchiOBHm_Chr4g0400061 RchiOBHm_Chr4g0437571 RchiOBHm_Chr5g0041361 RchiOBHm_Chr5g0041421 RchiOBHm_Chr5g0041481 RchiOBHm_Chr5g0041491 RchiOBHm_Chr5g0041501 RchiOBHm_Chr5g0041511 RchiOBHm_Chr5g0042491 RchiOBHm_Chr5g0042501 RchiOBHm_Chr6g0263551 RchiOBHm_Chr6g0286221 RchiOBHm_Chr7g0228171 RchiOBHm_Chr7g0231391 RchiOBHm_Chr7g0231401
rosa_laevigata RLG00000000870 RLG00000001420 RLG00000001582 RLG00000001602 RLG00000001700 RLG00000002476 RLG00000005787 RLG00000007689 RLG00000008446 RLG00000008811 RLG00000008812 RLG00000009013 RLG00000009942 RLG00000012752 RLG00000013511 RLG00000014053 RLG00000015257 RLG00000015258 RLG00000016149 RLG00000016691 RLG00000018661 RLG00000018662 RLG00000020991 RLG00000020992 RLG00000020993 RLG00000027309 RLG00000028568 RLG00000029119 RLG00000029371 RLG00000029563 RLG00000029818 RLG00000029819 RLG00000029821 RLG00000029822 RLG00000029824 RLG00000029827 RLG00000029828 RLG00000029829 RLG00000029841 RLG00000029843 RLG00000032676 RLG00000033366 RLG00000033367 RLG00000034023 RLG00000034066 RLG00000034072 RLG00000034073 RLG00000034074 RLG00000034130 RLG00000034133 RLG00000035487 RLG00000035488 RLG00000035793
rosa_multiflora Rmu_co8241405.1_g000001 Rmu_co8251033.1_g000001 Rmu_co8297611.1_g000001 Rmu_co8346639.1_g000001 Rmu_co8405917.1_g000001 Rmu_sc0000045.1_g000044 Rmu_sc0000061.1_g000032 Rmu_sc0000068.1_g000021 Rmu_sc0000068.1_g000022 Rmu_sc0000415.1_g000001 Rmu_sc0000499.1_g000003 Rmu_sc0000594.1_g000020 Rmu_sc0000673.1_g000007 Rmu_sc0000908.1_g000004 Rmu_sc0001123.1_g000013 Rmu_sc0001123.1_g000014 Rmu_sc0001167.1_g000026 Rmu_sc0001598.1_g000011 Rmu_sc0001696.1_g000003 Rmu_sc0001696.1_g000011 Rmu_sc0001696.1_g000019 Rmu_sc0001696.1_g000020 Rmu_sc0003007.1_g000016 Rmu_sc0003007.1_g000029 Rmu_sc0003051.1_g000010 Rmu_sc0003396.1_g000029 Rmu_sc0004798.1_g000020 Rmu_sc0005375.1_g000016 Rmu_sc0005375.1_g000017 Rmu_sc0005659.1_g000033 Rmu_sc0005659.1_g000034 Rmu_sc0006311.1_g000011 Rmu_sc0008249.1_g000002 Rmu_sc0008249.1_g000018 Rmu_sc0008600.1_g000014 Rmu_sc0009365.1_g000010 Rmu_sc0009365.1_g000022 Rmu_sc0009365.1_g000025 Rmu_sc0011112.1_g000008 Rmu_sc0011112.1_g000009 Rmu_sc0012031.1_g000020 Rmu_sc0013350.1_g000014 Rmu_sc0020359.1_g000004 Rmu_sc0021997.1_g000003 Rmu_sc0021997.1_g000004 Rmu_sc0023610.1_g000002 Rmu_sc0023611.1_g000001 Rmu_sc0028894.1_g000001 Rmu_sc0031050.1_g000001 Rmu_sc0041109.1_g000001 Rmu_ssc0000087.1_g000050 Rmu_ssc0000087.1_g000051 Rmu_ssc0000087.1_g000052 Rmu_ssc0000295.1_g000058 Rmu_ssc0000343.1_g000031 Rmu_ssc0000423.1_g000015 Rmu_ssc0000470.1_g000005 Rmu_ssc0000470.1_g000006
rosa_roxburghii Rroxscaffold_1G00005900 Rroxscaffold_1G00005910 Rroxscaffold_1G00012600 Rroxscaffold_1G00016860 Rroxscaffold_1G00032110 Rroxscaffold_1G00038140 Rroxscaffold_1G00038200 Rroxscaffold_1G00039020 Rroxscaffold_1G00039030 Rroxscaffold_1G00039080 Rroxscaffold_1G00039090 Rroxscaffold_1G00039270 Rroxscaffold_2G00097120 Rroxscaffold_2G00097130 Rroxscaffold_2G00137700 Rroxscaffold_2G00151740 Rroxscaffold_2G00151750 Rroxscaffold_3G00224160 Rroxscaffold_3G00224170 Rroxscaffold_3G00226080 Rroxscaffold_3G00226090 Rroxscaffold_3G00229350 Rroxscaffold_3G00231340 Rroxscaffold_4G00291390 Rroxscaffold_4G00316220 Rroxscaffold_4G00316230 Rroxscaffold_4G00320040 Rroxscaffold_4G00320050 Rroxscaffold_4G00320120 Rroxscaffold_4G00320140 Rroxscaffold_4G00320180 Rroxscaffold_4G00320270 Rroxscaffold_4G00320280 Rroxscaffold_4G00320290 Rroxscaffold_4G00320430 Rroxscaffold_4G00321910 Rroxscaffold_5G00348730 Rroxscaffold_5G00355020 Rroxscaffold_5G00355080 Rroxscaffold_5G00357490 Rroxscaffold_5G00376500 Rroxscaffold_5G00376510 Rroxscaffold_7G00179590 Rroxscaffold_7G00179600 Rroxscaffold_7G00198610
rosa_rugosa Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0085400 Rorug01G0086300 Rorug01G0086500 Rorug01G0087000 Rorug01G0087100 Rorug01G0087600 Rorug01G0087700 Rorug01G0087800 Rorug01G0087800 Rorug01G0302500 Rorug02G0249300 Rorug02G0249300 Rorug02G0249400 Rorug03G0189000 Rorug04G0181800 Rorug04G0283800.1 Rorug04G0283900.1 Rorug05G0043500 Rorug05G0191800 Rorug05G0191900 Rorug05G0192800 Rorug05G0192900 Rorug05G0193000 Rorug05G0201000 Rorug05G0201100 Rorug06G0173900 Rorug06G0173900 Rorug07G0009800 Rorug07G0246300.1 Rorug07G0246400
rosa_samantha Rh1AG103600 Rh1AG104800 Rh1AG105200 Rh1AG105300 Rh1AG105500 Rh1BG082000 Rh1BG082200 Rh1BG082300 Rh1BG082900 Rh1BG083000 Rh1BG083300 Rh1BG083500 Rh1BG083600 Rh1BG083800 Rh1BG083900 Rh1BG084000 Rh1BG084100 Rh1BG084200 Rh1BG092200 Rh1BG275300 Rh1CG098700 Rh1CG098800 Rh1CG100300 Rh1CG100400 Rh1CG100600 Rh1CG100900 Rh1CG101000 Rh1CG101700 Rh1DG066900 Rh1DG067000 Rh1DG106000 Rh1DG107600 Rh1DG107800 Rh1DG108100 Rh1DG108200 Rh1DG108600 Rh1DG108700 Rh1DG108900 Rh1DG109000 Rh1DG109100 Rh1DG109300 Rh1DG109400 Rh1DG109500 Rh1DG109700 Rh1DG109800 Rh1DG173900 Rh2AG270300 Rh2AG398900 Rh2CG245000 Rh2CG260700 Rh2CG278600 Rh2CG342400 Rh2CG385700 Rh3DG197200 Rh3DG197300 Rh4AG015100 Rh4BG347400 Rh4DG360400 Rh5AG278600 Rh5AG278700 Rh5AG286900 Rh5AG287000 Rh5BG282900 Rh5BG283000 Rh5BG283100 Rh5BG291400 Rh5CG314900 Rh5CG315100 Rh5CG315400 Rh5CG315700 Rh5CG315900 Rh5CG316000 Rh5CG323600 Rh5CG323700 Rh5DG291400 Rh5DG292300 Rh5DG292500 Rh5DG292700 Rh5DG292800 Rh5DG292900 Rh5DG301100 Rh5DG301200 Rh5DG301400 Rh5DG350900 Rh6BG407700 Rh6CG294900 Rh6DG286900 Rh7AG400400 Rh7AG420600 Rh7BG381700 Rh7BG395000 Rh7CG418600 Rh7CG440700 Rh7DG396500 Rh7DG413200
rosa_wichuraiana Rw1G003300 Rw1G008240 Rw1G008250 Rw1G008270 Rw1G008330 Rw1G008340 Rw1G008350 Rw1G008360 Rw1G008370 Rw1G008810 Rw1G021140 Rw3G020650 Rw5G026150 Rw5G026200 Rw5G026240 Rw5G026250 Rw5G026650 Rw5G030820 Rw7G006630 Rw7G030060 Rw7G034700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 212, 288
AccIII TCCGGA 1 cut(s) 22
AciI CCGC 4 cut(s) 183, 407, 605, 908
AcsI RAATTY 1 cut(s) 903
AcuI CTGAAG 2 cut(s) 144, 765
AfiI CCNNNNNNNGG 4 cut(s) 86, 212, 288, 508
AgsI TTSAA 4 cut(s) 460, 548, 863, 961
AhdI GACNNNNNGTC 1 cut(s) 460
AjuI GAANNNNNNNTTGG 2 cut(s) 338, 370
AluBI AGCT 8 cut(s) 233, 268, 286, 414, 496, 625, 822, 871
AluI AGCT 8 cut(s) 233, 268, 286, 414, 496, 625, 822, 871
Alw21I GWGCWC 1 cut(s) 296
Alw26I GTCTC 2 cut(s) 719, 969
Alw44I GTGCAC 1 cut(s) 292
Ama87I CYCGRG 2 cut(s) 258, 341
Aor13HI TCCGGA 1 cut(s) 22
AoxI GGCC 4 cut(s) 244, 386, 499, 952
ApaLI GTGCAC 1 cut(s) 292
ApeKI GCWGC 5 cut(s) 101, 185, 613, 871, 874
ApoI RAATTY 1 cut(s) 903
Asp700I GAANNNNTTC 1 cut(s) 141
AspLEI GCGC 1 cut(s) 34
AspS9I GGNCC 1 cut(s) 953
AsuC2I CCSGG 2 cut(s) 259, 260
AsuHPI GGTGA 5 cut(s) 227, 302, 496, 814, 826
AvaI CYCGRG 2 cut(s) 258, 341
AxyI CCTNAGG 1 cut(s) 879
BaeGI GKGCMC 1 cut(s) 296
Bbv12I GWGCWC 1 cut(s) 296
BbvI GCAGC 5 cut(s) 88, 172, 625, 858, 861
BccI CCATC 4 cut(s) 315, 709, 777, 977
BceAI ACGGC 1 cut(s) 114
BcnI CCSGG 2 cut(s) 259, 260
BcoDI GTCTC 2 cut(s) 719, 969
BfaI CTAG 5 cut(s) 86, 350, 365, 497, 968
BfmI CTRYAG 2 cut(s) 166, 579
BfoI RGCGCY 1 cut(s) 35
BisI GCNGC 5 cut(s) 102, 186, 614, 872, 875
BlsI GCNGC 5 cut(s) 103, 187, 615, 873, 876
Bme1390I CCNGG 2 cut(s) 259, 260
BmeRI GACNNNNNGTC 1 cut(s) 460
BmeT110I CYCGRG 2 cut(s) 258, 341
BmgT120I GGNCC 1 cut(s) 953
BmiI GGNNCC 2 cut(s) 204, 402
BmrFI CCNGG 2 cut(s) 259, 260
BmsI GCATC 2 cut(s) 289, 938
Bpu10I CCTNAGC 1 cut(s) 768
BpuMI CCSGG 2 cut(s) 259, 260
BsaBI GATNNNNATC 2 cut(s) 372, 548
BsaJI CCNNGG 3 cut(s) 258, 507, 695
BsaWI WCCGGW 2 cut(s) 22, 79
Bsc4I CCNNNNNNNGG 4 cut(s) 86, 212, 288, 508
Bse118I RCCGGY 1 cut(s) 403
Bse1I ACTGG 1 cut(s) 206
Bse21I CCTNAGG 1 cut(s) 879
Bse3DI GCAATG 2 cut(s) 222, 483
Bse8I GATNNNNATC 2 cut(s) 372, 548
BseAI TCCGGA 1 cut(s) 22
BseDI CCNNGG 3 cut(s) 258, 507, 695
BseGI GGATG 6 cut(s) 268, 304, 843, 926, 929, 988
BseJI GATNNNNATC 2 cut(s) 372, 548
BseLI CCNNNNNNNGG 4 cut(s) 86, 212, 288, 508
BseMI GCAATG 2 cut(s) 222, 483
BseMII CTCAG 4 cut(s) 617, 770, 782, 870
BseNI ACTGG 1 cut(s) 206
BseSI GKGCMC 1 cut(s) 296
BseXI GCAGC 5 cut(s) 88, 172, 625, 858, 861
BshFI GGCC 4 cut(s) 246, 388, 501, 954
BsiHKAI GWGCWC 1 cut(s) 296
BsiHKCI CYCGRG 2 cut(s) 258, 341
BsiSI CCGG 4 cut(s) 23, 80, 259, 404
BslFI GGGAC 2 cut(s) 29, 703
BslI CCNNNNNNNGG 4 cut(s) 86, 212, 288, 508
BsmAI GTCTC 2 cut(s) 719, 969
BsmBI CGTCTC 1 cut(s) 719
BsmFI GGGAC 2 cut(s) 29, 703
BsnI GGCC 4 cut(s) 246, 388, 501, 954
BsoBI CYCGRG 2 cut(s) 258, 341
Bsp1286I GDGCHC 1 cut(s) 296
Bsp13I TCCGGA 1 cut(s) 22
Bsp143I GATC 1 cut(s) 894
BspACI CCGC 4 cut(s) 183, 407, 605, 908
BspANI GGCC 4 cut(s) 246, 388, 501, 954
BspCNI CTCAG 4 cut(s) 618, 771, 781, 871
BspEI TCCGGA 1 cut(s) 22
BspLI GGNNCC 2 cut(s) 204, 402
BspMAI CTGCAG 1 cut(s) 583
BspQI GCTCTTC 1 cut(s) 812
BsrDI GCAATG 2 cut(s) 222, 483
BsrFI RCCGGY 1 cut(s) 403
BsrI ACTGG 1 cut(s) 206
BssAI RCCGGY 1 cut(s) 403
BssECI CCNNGG 3 cut(s) 258, 507, 695
BssMI GATC 1 cut(s) 894
BssT1I CCWWGG 1 cut(s) 507
Bst4CI ACNGT 2 cut(s) 40, 696
Bst6I CTCTTC 3 cut(s) 477, 812, 966
BstC8I GCNNGC 2 cut(s) 324, 405
BstDEI CTNAG 4 cut(s) 626, 768, 779, 879
BstDSI CCRYGG 1 cut(s) 695
BstENI CCTNNNNNAGG 1 cut(s) 506
BstF5I GGATG 6 cut(s) 268, 304, 843, 926, 929, 988
BstH2I RGCGCY 1 cut(s) 35
BstHHI GCGC 1 cut(s) 34
BstKTI GATC 1 cut(s) 897
BstMAI GTCTC 2 cut(s) 719, 969
BstMBI GATC 1 cut(s) 894
BstMWI GCNNNNNNNGC 3 cut(s) 137, 613, 622
BstSCI CCNGG 2 cut(s) 257, 258
BstSFI CTRYAG 2 cut(s) 166, 579
BstSLI GKGCMC 1 cut(s) 296
BstV1I GCAGC 5 cut(s) 88, 172, 625, 858, 861
Bsu36I CCTNAGG 1 cut(s) 879
BsuRI GGCC 4 cut(s) 246, 388, 501, 954
BtgI CCRYGG 1 cut(s) 695
BtsCI GGATG 6 cut(s) 268, 304, 843, 926, 929, 988
BtsI GCAGTG 3 cut(s) 147, 561, 660
BtsIMutI CAGTG 3 cut(s) 147, 561, 660
Cac8I GCNNGC 2 cut(s) 324, 405
CfoI GCGC 1 cut(s) 34
Cfr10I RCCGGY 1 cut(s) 403
Cfr13I GGNCC 1 cut(s) 953
Cfr9I CCCGGG 1 cut(s) 258
CseI GACGC 1 cut(s) 736
CviAII CATG 1 cut(s) 534
DdeI CTNAG 4 cut(s) 626, 768, 779, 879
DpnI GATC 1 cut(s) 896
DpnII GATC 1 cut(s) 894
DriI GACNNNNNGTC 1 cut(s) 460
Eam1104I CTCTTC 3 cut(s) 477, 812, 966
Eam1105I GACNNNNNGTC 1 cut(s) 460
EarI CTCTTC 3 cut(s) 477, 812, 966
EciI GGCGGA 1 cut(s) 422
Eco130I CCWWGG 1 cut(s) 507
Eco147I AGGCCT 1 cut(s) 501
Eco57I CTGAAG 2 cut(s) 144, 765
Eco81I CCTNAGG 1 cut(s) 879
Eco88I CYCGRG 2 cut(s) 258, 341
EcoNI CCTNNNNNAGG 1 cut(s) 506
EcoT14I CCWWGG 1 cut(s) 507
ErhI CCWWGG 1 cut(s) 507
Esp3I CGTCTC 1 cut(s) 719
FaeI CATG 1 cut(s) 537
FaqI GGGAC 2 cut(s) 29, 703
FatI CATG 1 cut(s) 533
FauI CCCGC 1 cut(s) 612
FauNDI CATATG 1 cut(s) 790
Fnu4HI GCNGC 5 cut(s) 102, 186, 614, 872, 875
FokI GGATG 5 cut(s) 275, 311, 850, 916, 933
Fsp4HI GCNGC 5 cut(s) 102, 186, 614, 872, 875
FspBI CTAG 5 cut(s) 86, 350, 365, 497, 968
GlaI GCGC 1 cut(s) 33
GluI GCNGC 5 cut(s) 102, 186, 614, 872, 875
HaeII RGCGCY 1 cut(s) 35
HaeIII GGCC 4 cut(s) 246, 388, 501, 954
HapII CCGG 4 cut(s) 23, 80, 259, 404
HgaI GACGC 1 cut(s) 736
HhaI GCGC 1 cut(s) 34
Hin1II CATG 1 cut(s) 537
Hin6I GCGC 1 cut(s) 32
HinP1I GCGC 1 cut(s) 32
HincII GTYRAC 2 cut(s) 586, 889
HindII GTYRAC 2 cut(s) 586, 889
HindIII AAGCTT 1 cut(s) 284
HinfI GANTC 2 cut(s) 346, 519
HpaII CCGG 4 cut(s) 23, 80, 259, 404
HphI GGTGA 5 cut(s) 227, 302, 496, 814, 826
Hpy166II GTNNAC 4 cut(s) 193, 294, 586, 889
Hpy188I TCNGA 4 cut(s) 124, 780, 934, 946
Hpy188III TCNNGA 3 cut(s) 23, 343, 968
Hpy8I GTNNAC 4 cut(s) 193, 294, 586, 889
Hpy99I CGWCG 1 cut(s) 44
HpyAV CCTTC 1 cut(s) 835
HpyCH4III ACNGT 2 cut(s) 40, 696
HpyCH4V TGCA 8 cut(s) 59, 104, 152, 294, 302, 537, 566, 581
HpyF10VI GCNNNNNNNGC 3 cut(s) 137, 613, 622
HpyF3I CTNAG 4 cut(s) 626, 768, 779, 879
Hsp92II CATG 1 cut(s) 537
HspAI GCGC 1 cut(s) 32
Kpn2I TCCGGA 1 cut(s) 22
KroI GCCGGC 1 cut(s) 403
KroNI GCCGGC 1 cut(s) 405
Kzo9I GATC 1 cut(s) 894
LguI GCTCTTC 1 cut(s) 812
LmnI GCTCC 3 cut(s) 202, 400, 868
Lsp1109I GCAGC 5 cut(s) 88, 172, 625, 858, 861
LweI GCATC 2 cut(s) 289, 938
MaeI CTAG 5 cut(s) 86, 350, 365, 497, 968
MaeIII GTNAC 1 cut(s) 274
MalI GATC 1 cut(s) 896
MboI GATC 1 cut(s) 894
MboII GAAGA 4 cut(s) 437, 494, 829, 983
MhlI GDGCHC 1 cut(s) 296
MluCI AATT 3 cut(s) 526, 738, 903
MlyI GAGTC 1 cut(s) 528
MnlI CCTC 8 cut(s) 130, 257, 512, 585, 828, 874, 911, 967
MroI TCCGGA 1 cut(s) 22
MroNI GCCGGC 1 cut(s) 403
MroXI GAANNNNTTC 1 cut(s) 141
MseI TTAA 3 cut(s) 429, 825, 994
MspA1I CMGCKG 1 cut(s) 185
MspI CCGG 4 cut(s) 23, 80, 259, 404
MspR9I CCNGG 2 cut(s) 259, 260
MwoI GCNNNNNNNGC 3 cut(s) 137, 613, 622
NaeI GCCGGC 1 cut(s) 405
NciI CCSGG 2 cut(s) 259, 260
NdeI CATATG 1 cut(s) 790
NdeII GATC 1 cut(s) 894
NgoMIV GCCGGC 1 cut(s) 403
NlaIII CATG 1 cut(s) 537
NlaIV GGNNCC 2 cut(s) 204, 402
PaeR7I CTCGAG 1 cut(s) 341
PceI AGGCCT 1 cut(s) 501
PciSI GCTCTTC 1 cut(s) 812
PdiI GCCGGC 1 cut(s) 405
PdmI GAANNNNTTC 1 cut(s) 141
PfeI GAWTC 1 cut(s) 346
PflMI CCANNNNNTGG 2 cut(s) 212, 288
PkrI GCNGC 5 cut(s) 103, 187, 615, 873, 876
PleI GAGTC 1 cut(s) 527
PpsI GAGTC 1 cut(s) 527
PspN4I GGNNCC 2 cut(s) 204, 402
PspPI GGNCC 1 cut(s) 953
PstI CTGCAG 1 cut(s) 583
SapI GCTCTTC 1 cut(s) 812
SaqAI TTAA 3 cut(s) 429, 825, 994
SatI GCNGC 5 cut(s) 102, 186, 614, 872, 875
Sau3AI GATC 1 cut(s) 894
Sau96I GGNCC 1 cut(s) 953
SchI GAGTC 1 cut(s) 528
ScrFI CCNGG 2 cut(s) 259, 260
SduI GDGCHC 1 cut(s) 296
SfaNI GCATC 2 cut(s) 289, 938
SfcI CTRYAG 2 cut(s) 166, 579
Sfr274I CTCGAG 1 cut(s) 341
SlaI CTCGAG 1 cut(s) 341
SmaI CCCGGG 1 cut(s) 260
SmlI CTYRAG 1 cut(s) 341
SmoI CTYRAG 1 cut(s) 341
Sse9I AATT 3 cut(s) 526, 738, 903
SseBI AGGCCT 1 cut(s) 501
SsiI CCGC 4 cut(s) 183, 407, 605, 908
SspI AATATT 1 cut(s) 19
SspMI CTAG 5 cut(s) 86, 350, 365, 497, 968
StuI AGGCCT 1 cut(s) 501
StyD4I CCNGG 2 cut(s) 257, 258
StyI CCWWGG 1 cut(s) 507
TaaI ACNGT 2 cut(s) 40, 696
TaqI TCGA 1 cut(s) 342
TasI AATT 3 cut(s) 526, 738, 903
TfiI GAWTC 1 cut(s) 346
Tru1I TTAA 3 cut(s) 429, 825, 994
Tru9I TTAA 3 cut(s) 429, 825, 994
TscAI CASTG 3 cut(s) 154, 568, 667
TseI GCWGC 5 cut(s) 101, 185, 613, 871, 874
TspDTI ATGAA 4 cut(s) 320, 371, 614, 854
TspGWI ACGGA 2 cut(s) 215, 311
TspMI CCCGGG 1 cut(s) 258
TspRI CASTG 3 cut(s) 154, 568, 667
Van91I CCANNNNNTGG 2 cut(s) 212, 288
VneI GTGCAC 1 cut(s) 292
XagI CCTNNNNNAGG 1 cut(s) 506
XapI RAATTY 1 cut(s) 903
XbaI TCTAGA 1 cut(s) 967
XhoI CTCGAG 1 cut(s) 341
XmaI CCCGGG 1 cut(s) 258
XmnI GAANNNNTTC 1 cut(s) 141
XspI CTAG 5 cut(s) 86, 350, 365, 497, 968
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.