protein modification by small protein conjugation or removal
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 3 cut(s) | 115, 279, 733 |
| AccII | CGCG | 1 cut(s) | 213 |
| AccIII | TCCGGA | 2 cut(s) | 197, 616 |
| AcsI | RAATTY | 1 cut(s) | 243 |
| AcyI | GRCGYC | 1 cut(s) | 112 |
| AfaI | GTAC | 2 cut(s) | 432, 585 |
| AgsI | TTSAA | 7 cut(s) | 91, 317, 344, 410, 470, 512, 769 |
| AleI | CACNNNNGTG | 1 cut(s) | 35 |
| AluBI | AGCT | 1 cut(s) | 17 |
| AluI | AGCT | 1 cut(s) | 17 |
| Alw26I | GTCTC | 1 cut(s) | 713 |
| Aor13HI | TCCGGA | 2 cut(s) | 197, 616 |
| AoxI | GGCC | 1 cut(s) | 93 |
| ApoI | RAATTY | 1 cut(s) | 243 |
| AspLEI | GCGC | 1 cut(s) | 215 |
| AsuC2I | CCSGG | 1 cut(s) | 249 |
| AsuHPI | GGTGA | 4 cut(s) | 49, 431, 647, 784 |
| BbsI | GAAGAC | 1 cut(s) | 214 |
| BccI | CCATC | 1 cut(s) | 195 |
| BclI | TGATCA | 1 cut(s) | 39 |
| BcnI | CCSGG | 1 cut(s) | 249 |
| BcoDI | GTCTC | 1 cut(s) | 713 |
| Bme1390I | CCNGG | 1 cut(s) | 249 |
| BmiI | GGNNCC | 2 cut(s) | 64, 441 |
| BmrFI | CCNGG | 1 cut(s) | 249 |
| BmsI | GCATC | 2 cut(s) | 539, 781 |
| BpiI | GAAGAC | 1 cut(s) | 214 |
| BpuMI | CCSGG | 1 cut(s) | 249 |
| BsaHI | GRCGYC | 1 cut(s) | 112 |
| BsaJI | CCNNGG | 2 cut(s) | 129, 307 |
| BsaWI | WCCGGW | 3 cut(s) | 65, 197, 616 |
| Bse118I | RCCGGY | 1 cut(s) | 95 |
| Bse1I | ACTGG | 3 cut(s) | 287, 630, 727 |
| BseAI | TCCGGA | 2 cut(s) | 197, 616 |
| BseDI | CCNNGG | 2 cut(s) | 129, 307 |
| BseGI | GGATG | 3 cut(s) | 206, 583, 796 |
| BseMII | CTCAG | 3 cut(s) | 174, 551, 588 |
| BseNI | ACTGG | 3 cut(s) | 287, 630, 727 |
| BsgI | GTGCAG | 2 cut(s) | 642, 801 |
| Bsh1236I | CGCG | 1 cut(s) | 213 |
| Bsh1285I | CGRYCG | 1 cut(s) | 100 |
| BshFI | GGCC | 1 cut(s) | 95 |
| BsiEI | CGRYCG | 1 cut(s) | 100 |
| BsiSI | CCGG | 5 cut(s) | 66, 96, 198, 248, 617 |
| BslFI | GGGAC | 1 cut(s) | 458 |
| BsmAI | GTCTC | 1 cut(s) | 713 |
| BsmFI | GGGAC | 1 cut(s) | 458 |
| BsnI | GGCC | 1 cut(s) | 95 |
| Bsp13I | TCCGGA | 2 cut(s) | 197, 616 |
| Bsp143I | GATC | 2 cut(s) | 39, 637 |
| Bsp19I | CCATGG | 1 cut(s) | 307 |
| BspANI | GGCC | 1 cut(s) | 95 |
| BspCNI | CTCAG | 3 cut(s) | 175, 552, 589 |
| BspEI | TCCGGA | 2 cut(s) | 197, 616 |
| BspFNI | CGCG | 1 cut(s) | 213 |
| BspLI | GGNNCC | 2 cut(s) | 64, 441 |
| BsrFI | RCCGGY | 1 cut(s) | 95 |
| BsrI | ACTGG | 3 cut(s) | 287, 630, 727 |
| BssAI | RCCGGY | 1 cut(s) | 95 |
| BssECI | CCNNGG | 2 cut(s) | 129, 307 |
| BssMI | GATC | 2 cut(s) | 39, 637 |
| BssNAI | GTATAC | 1 cut(s) | 280 |
| BssNI | GRCGYC | 1 cut(s) | 112 |
| BssT1I | CCWWGG | 2 cut(s) | 129, 307 |
| Bst1107I | GTATAC | 1 cut(s) | 280 |
| Bst4CI | ACNGT | 1 cut(s) | 503 |
| BstACI | GRCGYC | 1 cut(s) | 112 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 656 |
| BstDEI | CTNAG | 4 cut(s) | 183, 560, 587, 597 |
| BstDSI | CCRYGG | 1 cut(s) | 307 |
| BstF5I | GGATG | 3 cut(s) | 206, 583, 796 |
| BstFNI | CGCG | 1 cut(s) | 213 |
| BstHHI | GCGC | 1 cut(s) | 215 |
| BstKTI | GATC | 2 cut(s) | 42, 640 |
| BstMAI | GTCTC | 1 cut(s) | 713 |
| BstMBI | GATC | 2 cut(s) | 39, 637 |
| BstMCI | CGRYCG | 1 cut(s) | 100 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 656 |
| BstSCI | CCNGG | 1 cut(s) | 247 |
| BstUI | CGCG | 1 cut(s) | 213 |
| BstV2I | GAAGAC | 1 cut(s) | 214 |
| BstZ17I | GTATAC | 1 cut(s) | 280 |
| BsuRI | GGCC | 1 cut(s) | 95 |
| BtgI | CCRYGG | 1 cut(s) | 307 |
| BtsCI | GGATG | 3 cut(s) | 206, 583, 796 |
| BtsI | GCAGTG | 1 cut(s) | 355 |
| BtsIMutI | CAGTG | 2 cut(s) | 355, 637 |
| CfoI | GCGC | 1 cut(s) | 215 |
| Cfr10I | RCCGGY | 1 cut(s) | 95 |
| CseI | GACGC | 2 cut(s) | 101, 219 |
| Csp6I | GTAC | 2 cut(s) | 431, 584 |
| CviAII | CATG | 2 cut(s) | 308, 787 |
| CviJI | RGCY | 3 cut(s) | 17, 95, 525 |
| CviKI_1 | RGCY | 3 cut(s) | 17, 95, 525 |
| CviQI | GTAC | 2 cut(s) | 431, 584 |
| DdeI | CTNAG | 4 cut(s) | 183, 560, 587, 597 |
| DpnI | GATC | 2 cut(s) | 41, 639 |
| DpnII | GATC | 2 cut(s) | 39, 637 |
| DraI | TTTAAA | 1 cut(s) | 759 |
| Eco130I | CCWWGG | 2 cut(s) | 129, 307 |
| Eco32I | GATATC | 1 cut(s) | 457 |
| EcoRV | GATATC | 1 cut(s) | 457 |
| EcoT14I | CCWWGG | 2 cut(s) | 129, 307 |
| ErhI | CCWWGG | 2 cut(s) | 129, 307 |
| FaeI | CATG | 2 cut(s) | 311, 790 |
| FaqI | GGGAC | 1 cut(s) | 458 |
| FatI | CATG | 2 cut(s) | 307, 786 |
| FbaI | TGATCA | 1 cut(s) | 39 |
| FblI | GTMKAC | 3 cut(s) | 115, 279, 733 |
| FokI | GGATG | 3 cut(s) | 213, 590, 803 |
| GlaI | GCGC | 1 cut(s) | 214 |
| HaeIII | GGCC | 1 cut(s) | 95 |
| HapII | CCGG | 5 cut(s) | 66, 96, 198, 248, 617 |
| HgaI | GACGC | 2 cut(s) | 101, 219 |
| HhaI | GCGC | 1 cut(s) | 215 |
| Hin1I | GRCGYC | 1 cut(s) | 112 |
| Hin1II | CATG | 2 cut(s) | 311, 790 |
| Hin6I | GCGC | 1 cut(s) | 213 |
| HinP1I | GCGC | 1 cut(s) | 213 |
| HincII | GTYRAC | 1 cut(s) | 734 |
| HindII | GTYRAC | 1 cut(s) | 734 |
| HinfI | GANTC | 8 cut(s) | 7, 185, 255, 317, 340, 491, 601, 730 |
| HpaII | CCGG | 5 cut(s) | 66, 96, 198, 248, 617 |
| HphI | GGTGA | 4 cut(s) | 49, 431, 647, 784 |
| Hpy166II | GTNNAC | 5 cut(s) | 30, 116, 280, 370, 734 |
| Hpy188I | TCNGA | 4 cut(s) | 82, 184, 337, 561 |
| Hpy188III | TCNNGA | 6 cut(s) | 43, 198, 382, 407, 575, 617 |
| Hpy8I | GTNNAC | 5 cut(s) | 30, 116, 280, 370, 734 |
| HpyAV | CCTTC | 2 cut(s) | 204, 763 |
| HpyCH4III | ACNGT | 1 cut(s) | 503 |
| HpyCH4V | TGCA | 7 cut(s) | 105, 392, 530, 609, 659, 739, 782 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 656 |
| HpyF3I | CTNAG | 4 cut(s) | 183, 560, 587, 597 |
| Hsp92I | GRCGYC | 1 cut(s) | 112 |
| Hsp92II | CATG | 2 cut(s) | 311, 790 |
| HspAI | GCGC | 1 cut(s) | 213 |
| Kpn2I | TCCGGA | 2 cut(s) | 197, 616 |
| Ksp22I | TGATCA | 1 cut(s) | 39 |
| Kzo9I | GATC | 2 cut(s) | 39, 637 |
| LweI | GCATC | 2 cut(s) | 539, 781 |
| MaeIII | GTNAC | 1 cut(s) | 670 |
| MalI | GATC | 2 cut(s) | 41, 639 |
| MboI | GATC | 2 cut(s) | 39, 637 |
| MboII | GAAGA | 4 cut(s) | 219, 632, 718, 764 |
| MluCI | AATT | 6 cut(s) | 46, 178, 243, 422, 450, 744 |
| MlyI | GAGTC | 3 cut(s) | 194, 249, 739 |
| MmeI | TCCRAC | 2 cut(s) | 672, 681 |
| MnlI | CCTC | 5 cut(s) | 245, 430, 515, 640, 742 |
| MroI | TCCGGA | 2 cut(s) | 197, 616 |
| MseI | TTAA | 2 cut(s) | 687, 758 |
| MslI | CAYNNNNRTG | 1 cut(s) | 35 |
| MspI | CCGG | 5 cut(s) | 66, 96, 198, 248, 617 |
| MspR9I | CCNGG | 1 cut(s) | 249 |
| MvnI | CGCG | 1 cut(s) | 213 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 656 |
| NciI | CCSGG | 1 cut(s) | 249 |
| NcoI | CCATGG | 1 cut(s) | 307 |
| NdeII | GATC | 2 cut(s) | 39, 637 |
| NlaIII | CATG | 2 cut(s) | 311, 790 |
| NlaIV | GGNNCC | 2 cut(s) | 64, 441 |
| OliI | CACNNNNGTG | 1 cut(s) | 35 |
| PfeI | GAWTC | 5 cut(s) | 7, 317, 340, 491, 601 |
| PfoI | TCCNGGA | 1 cut(s) | 247 |
| PleI | GAGTC | 3 cut(s) | 193, 249, 738 |
| PpsI | GAGTC | 3 cut(s) | 193, 249, 738 |
| PspN4I | GGNNCC | 2 cut(s) | 64, 441 |
| RsaI | GTAC | 2 cut(s) | 432, 585 |
| RsaNI | GTAC | 2 cut(s) | 431, 584 |
| RseI | CAYNNNNRTG | 1 cut(s) | 35 |
| SalI | GTCGAC | 1 cut(s) | 732 |
| SaqAI | TTAA | 2 cut(s) | 687, 758 |
| Sau3AI | GATC | 2 cut(s) | 39, 637 |
| SchI | GAGTC | 3 cut(s) | 194, 249, 739 |
| ScrFI | CCNGG | 1 cut(s) | 249 |
| SetI | ASST | 3 cut(s) | 19, 489, 774 |
| SfaNI | GCATC | 2 cut(s) | 539, 781 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 35 |
| Sse9I | AATT | 6 cut(s) | 46, 178, 243, 422, 450, 744 |
| StyD4I | CCNGG | 1 cut(s) | 247 |
| StyI | CCWWGG | 2 cut(s) | 129, 307 |
| TaaI | ACNGT | 1 cut(s) | 503 |
| TaqI | TCGA | 2 cut(s) | 520, 733 |
| TasI | AATT | 6 cut(s) | 46, 178, 243, 422, 450, 744 |
| TatI | WGTACW | 1 cut(s) | 583 |
| TfiI | GAWTC | 5 cut(s) | 7, 317, 340, 491, 601 |
| Tru1I | TTAA | 2 cut(s) | 687, 758 |
| Tru9I | TTAA | 2 cut(s) | 687, 758 |
| TscAI | CASTG | 2 cut(s) | 355, 637 |
| TspDTI | ATGAA | 2 cut(s) | 306, 512 |
| TspGWI | ACGGA | 1 cut(s) | 387 |
| TspRI | CASTG | 2 cut(s) | 355, 637 |
| XapI | RAATTY | 1 cut(s) | 243 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 637 |
| XmiI | GTMKAC | 3 cut(s) | 115, 279, 733 |