Ring finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54360 AT3G54360 |
| fragaria_vesca | FvH4_7g04620 FvH4_7g04620 |
| malus_domestica | MD07G1085200.v1.1 |
| prunus_persica | Prupe.2G051700_v2.0.a1 |
| pyrus_communis | pycom07g03790 |
| rosa_chinensis | RchiOBHm_Chr1g0330051 |
| rosa_laevigata | RLG00000029838 |
| rosa_multiflora | Rmu_sc0009365.1_g000027 |
| rosa_roxburghii | Rroxscaffold_4G00320410 |
| rosa_rugosa | Rorug01G0085400 |
| rosa_samantha | Rh1AG104000 Rh1BG082400 Rh1CG098900 Rh1DG106100 |
| rosa_wichuraiana | Rw0G013520 Rw1G008790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 853 |
| AccBSI | CCGCTC | 2 cut(s) | 32, 587 |
| AccII | CGCG | 1 cut(s) | 778 |
| AciI | CCGC | 7 cut(s) | 30, 331, 344, 587, 778, 997, 1000 |
| AclWI | GGATC | 3 cut(s) | 306, 824, 864 |
| AcoI | YGGCCR | 1 cut(s) | 35 |
| AcsI | RAATTY | 2 cut(s) | 289, 929 |
| AcuI | CTGAAG | 2 cut(s) | 269, 996 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 245, 853 |
| AflII | CTTAAG | 1 cut(s) | 1022 |
| AflIII | ACRYGT | 2 cut(s) | 423, 558 |
| AgsI | TTSAA | 9 cut(s) | 124, 222, 229, 363, 656, 678, 720, 802, 935 |
| AjiI | CACGTC | 3 cut(s) | 424, 561, 812 |
| Alw21I | GWGCWC | 1 cut(s) | 481 |
| Alw26I | GTCTC | 2 cut(s) | 339, 756 |
| AlwI | GGATC | 3 cut(s) | 306, 824, 864 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 853 |
| AoxI | GGCC | 3 cut(s) | 5, 35, 130 |
| ApeKI | GCWGC | 3 cut(s) | 454, 773, 994 |
| ApoI | RAATTY | 2 cut(s) | 289, 929 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 498, 530 |
| AspLEI | GCGC | 1 cut(s) | 778 |
| AspS9I | GGNCC | 1 cut(s) | 131 |
| BanII | GRGCYC | 1 cut(s) | 481 |
| BbsI | GAAGAC | 3 cut(s) | 426, 531, 984 |
| Bbv12I | GWGCWC | 1 cut(s) | 481 |
| BbvCI | CCTCAGC | 1 cut(s) | 64 |
| BbvI | GCAGC | 3 cut(s) | 466, 760, 1006 |
| BccI | CCATC | 3 cut(s) | 46, 752, 850 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 299, 333 |
| BcoDI | GTCTC | 2 cut(s) | 339, 756 |
| BfaI | CTAG | 2 cut(s) | 860, 902 |
| BfmI | CTRYAG | 1 cut(s) | 610 |
| BfrI | CTTAAG | 1 cut(s) | 1022 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 467 |
| BglII | AGATCT | 1 cut(s) | 742 |
| BisI | GCNGC | 6 cut(s) | 30, 455, 774, 995, 998, 1001 |
| BlsI | GCNGC | 6 cut(s) | 31, 456, 775, 996, 999, 1002 |
| BmgBI | CACGTC | 3 cut(s) | 424, 561, 812 |
| BmgT120I | GGNCC | 1 cut(s) | 131 |
| BmsI | GCATC | 2 cut(s) | 619, 805 |
| BoxI | GACNNNNGTC | 2 cut(s) | 612, 984 |
| BpiI | GAAGAC | 3 cut(s) | 426, 531, 984 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 576, 608 |
| BpmI | CTGGAG | 1 cut(s) | 1034 |
| Bpu10I | CCTNAGC | 1 cut(s) | 64 |
| BpuEI | CTTGAG | 1 cut(s) | 1010 |
| BsaI | GGTCTC | 2 cut(s) | 339, 756 |
| BsaJI | CCNNGG | 1 cut(s) | 99 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 245, 853 |
| Bse1I | ACTGG | 3 cut(s) | 8, 793, 988 |
| Bse3DI | GCAATG | 1 cut(s) | 388 |
| BseDI | CCNNGG | 1 cut(s) | 99 |
| BseGI | GGATG | 3 cut(s) | 832, 842, 919 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 245, 853 |
| BseMI | GCAATG | 1 cut(s) | 388 |
| BseMII | CTCAG | 5 cut(s) | 78, 128, 151, 494, 590 |
| BseNI | ACTGG | 3 cut(s) | 8, 793, 988 |
| BseXI | GCAGC | 3 cut(s) | 466, 760, 1006 |
| BsgI | GTGCAG | 2 cut(s) | 473, 540 |
| Bsh1236I | CGCG | 1 cut(s) | 778 |
| BshFI | GGCC | 3 cut(s) | 7, 37, 132 |
| BsiHKAI | GWGCWC | 1 cut(s) | 481 |
| BslFI | GGGAC | 1 cut(s) | 170 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 245, 853 |
| BsmAI | GTCTC | 2 cut(s) | 339, 756 |
| BsmFI | GGGAC | 1 cut(s) | 170 |
| BsmI | GAATGC | 2 cut(s) | 470, 603 |
| BsnI | GGCC | 3 cut(s) | 7, 37, 132 |
| Bso31I | GGTCTC | 2 cut(s) | 339, 756 |
| Bsp1286I | GDGCHC | 1 cut(s) | 481 |
| Bsp143I | GATC | 6 cut(s) | 264, 298, 694, 742, 829, 856 |
| BspACI | CCGC | 7 cut(s) | 30, 331, 344, 587, 778, 997, 1000 |
| BspANI | GGCC | 3 cut(s) | 7, 37, 132 |
| BspCNI | CTCAG | 5 cut(s) | 77, 127, 150, 493, 589 |
| BspFNI | CGCG | 1 cut(s) | 778 |
| BspMAI | CTGCAG | 1 cut(s) | 614 |
| BspPI | GGATC | 3 cut(s) | 306, 824, 864 |
| BspTI | CTTAAG | 1 cut(s) | 1022 |
| BspTNI | GGTCTC | 2 cut(s) | 339, 756 |
| BsrBI | CCGCTC | 2 cut(s) | 32, 587 |
| BsrDI | GCAATG | 1 cut(s) | 388 |
| BsrI | ACTGG | 3 cut(s) | 8, 793, 988 |
| BssECI | CCNNGG | 1 cut(s) | 99 |
| BssMI | GATC | 6 cut(s) | 264, 298, 694, 742, 829, 856 |
| BssT1I | CCWWGG | 1 cut(s) | 99 |
| Bst4CI | ACNGT | 1 cut(s) | 236 |
| Bst6I | CTCTTC | 1 cut(s) | 651 |
| BstAFI | CTTAAG | 1 cut(s) | 1022 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 881 |
| BstC8I | GCNNGC | 1 cut(s) | 459 |
| BstDEI | CTNAG | 6 cut(s) | 64, 114, 137, 480, 509, 576 |
| BstF5I | GGATG | 3 cut(s) | 832, 842, 919 |
| BstFNI | CGCG | 1 cut(s) | 778 |
| BstHHI | GCGC | 1 cut(s) | 778 |
| BstKTI | GATC | 6 cut(s) | 267, 301, 697, 745, 832, 859 |
| BstMAI | GTCTC | 2 cut(s) | 339, 756 |
| BstMBI | GATC | 6 cut(s) | 264, 298, 694, 742, 829, 856 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 43, 74, 138, 467, 476, 638, 881, 1000, 1009 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 612, 984 |
| BstSFI | CTRYAG | 1 cut(s) | 610 |
| BstUI | CGCG | 1 cut(s) | 778 |
| BstV1I | GCAGC | 3 cut(s) | 466, 760, 1006 |
| BstV2I | GAAGAC | 3 cut(s) | 426, 531, 984 |
| BstX2I | RGATCY | 2 cut(s) | 742, 856 |
| BstYI | RGATCY | 2 cut(s) | 742, 856 |
| BsuRI | GGCC | 3 cut(s) | 7, 37, 132 |
| BtrI | CACGTC | 3 cut(s) | 424, 561, 812 |
| BtsCI | GGATG | 3 cut(s) | 832, 842, 919 |
| BtsIMutI | CAGTG | 2 cut(s) | 981, 1014 |
| Cac8I | GCNNGC | 1 cut(s) | 459 |
| CaiI | CAGNNNCTG | 1 cut(s) | 853 |
| CfoI | GCGC | 1 cut(s) | 778 |
| Cfr13I | GGNCC | 1 cut(s) | 131 |
| CviAII | CATG | 2 cut(s) | 317, 463 |
| DdeI | CTNAG | 6 cut(s) | 64, 114, 137, 480, 509, 576 |
| DpnI | GATC | 6 cut(s) | 266, 300, 696, 744, 831, 858 |
| DpnII | GATC | 6 cut(s) | 264, 298, 694, 742, 829, 856 |
| EaeI | YGGCCR | 1 cut(s) | 35 |
| Eam1104I | CTCTTC | 1 cut(s) | 651 |
| EarI | CTCTTC | 1 cut(s) | 651 |
| Ecl136II | GAGCTC | 1 cut(s) | 479 |
| Eco130I | CCWWGG | 1 cut(s) | 99 |
| Eco24I | GRGCYC | 1 cut(s) | 481 |
| Eco31I | GGTCTC | 2 cut(s) | 339, 756 |
| Eco53kI | GAGCTC | 1 cut(s) | 479 |
| Eco57I | CTGAAG | 2 cut(s) | 269, 996 |
| EcoICRI | GAGCTC | 1 cut(s) | 479 |
| EcoT14I | CCWWGG | 1 cut(s) | 99 |
| EcoT38I | GRGCYC | 1 cut(s) | 481 |
| ErhI | CCWWGG | 1 cut(s) | 99 |
| FaeI | CATG | 2 cut(s) | 320, 466 |
| FaqI | GGGAC | 1 cut(s) | 170 |
| FatI | CATG | 2 cut(s) | 316, 462 |
| Fnu4HI | GCNGC | 6 cut(s) | 30, 455, 774, 995, 998, 1001 |
| FokI | GGATG | 3 cut(s) | 829, 839, 926 |
| FriOI | GRGCYC | 1 cut(s) | 481 |
| Fsp4HI | GCNGC | 6 cut(s) | 30, 455, 774, 995, 998, 1001 |
| FspBI | CTAG | 2 cut(s) | 860, 902 |
| GlaI | GCGC | 1 cut(s) | 777 |
| GluI | GCNGC | 6 cut(s) | 30, 455, 774, 995, 998, 1001 |
| GsuI | CTGGAG | 1 cut(s) | 1034 |
| HaeIII | GGCC | 3 cut(s) | 7, 37, 132 |
| HhaI | GCGC | 1 cut(s) | 778 |
| Hin1II | CATG | 2 cut(s) | 320, 466 |
| Hin6I | GCGC | 1 cut(s) | 776 |
| HinP1I | GCGC | 1 cut(s) | 776 |
| HincII | GTYRAC | 1 cut(s) | 892 |
| HindII | GTYRAC | 1 cut(s) | 892 |
| HindIII | AAGCTT | 2 cut(s) | 125, 210 |
| Hpy166II | GTNNAC | 1 cut(s) | 892 |
| Hpy188I | TCNGA | 9 cut(s) | 43, 117, 288, 476, 483, 533, 565, 596, 976 |
| Hpy188III | TCNNGA | 6 cut(s) | 222, 504, 698, 854, 935, 989 |
| Hpy8I | GTNNAC | 1 cut(s) | 892 |
| Hpy99I | CGWCG | 1 cut(s) | 813 |
| HpyAV | CCTTC | 3 cut(s) | 170, 305, 932 |
| HpyCH4III | ACNGT | 1 cut(s) | 236 |
| HpyCH4IV | ACGT | 5 cut(s) | 423, 560, 811, 888, 965 |
| HpyCH4V | TGCA | 8 cut(s) | 207, 320, 454, 521, 612, 875, 884, 920 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 43, 74, 138, 467, 476, 638, 881, 1000, 1009 |
| HpyF3I | CTNAG | 6 cut(s) | 64, 114, 137, 480, 509, 576 |
| HpySE526I | ACGT | 5 cut(s) | 423, 560, 811, 888, 965 |
| Hsp92II | CATG | 2 cut(s) | 320, 466 |
| HspAI | GCGC | 1 cut(s) | 776 |
| Kzo9I | GATC | 6 cut(s) | 264, 298, 694, 742, 829, 856 |
| LmnI | GCTCC | 2 cut(s) | 248, 584 |
| Lsp1109I | GCAGC | 3 cut(s) | 466, 760, 1006 |
| LweI | GCATC | 2 cut(s) | 619, 805 |
| MaeI | CTAG | 2 cut(s) | 860, 902 |
| MaeII | ACGT | 5 cut(s) | 423, 560, 811, 888, 965 |
| MaeIII | GTNAC | 3 cut(s) | 104, 554, 647 |
| MalI | GATC | 6 cut(s) | 266, 300, 696, 744, 831, 858 |
| MbiI | CCGCTC | 2 cut(s) | 32, 587 |
| MboI | GATC | 6 cut(s) | 264, 298, 694, 742, 829, 856 |
| MboII | GAAGA | 6 cut(s) | 274, 275, 431, 536, 668, 989 |
| MfeI | CAATTG | 1 cut(s) | 921 |
| MflI | RGATCY | 2 cut(s) | 742, 856 |
| MhlI | GDGCHC | 1 cut(s) | 481 |
| MluCI | AATT | 8 cut(s) | 81, 289, 720, 735, 921, 929, 947, 1032 |
| MlyI | GAGTC | 3 cut(s) | 68, 164, 1036 |
| MmeI | TCCRAC | 1 cut(s) | 933 |
| MnlI | CCTC | 7 cut(s) | 73, 144, 340, 431, 459, 527, 904 |
| MseI | TTAA | 4 cut(s) | 729, 747, 968, 1023 |
| MspA1I | CMGCKG | 3 cut(s) | 68, 141, 997 |
| MspCI | CTTAAG | 1 cut(s) | 1022 |
| MunI | CAATTG | 1 cut(s) | 921 |
| Mva1269I | GAATGC | 2 cut(s) | 470, 603 |
| MvnI | CGCG | 1 cut(s) | 778 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 43, 74, 138, 467, 476, 638, 881, 1000, 1009 |
| NdeII | GATC | 6 cut(s) | 264, 298, 694, 742, 829, 856 |
| NlaIII | CATG | 2 cut(s) | 320, 466 |
| NmeAIII | GCCGAG | 1 cut(s) | 13 |
| PctI | GAATGC | 2 cut(s) | 470, 603 |
| PfeI | GAWTC | 7 cut(s) | 110, 225, 324, 359, 850, 898, 956 |
| PflFI | GACNNNGTC | 1 cut(s) | 510 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 853 |
| PkrI | GCNGC | 6 cut(s) | 31, 456, 775, 996, 999, 1002 |
| PleI | GAGTC | 3 cut(s) | 67, 164, 1035 |
| PpsI | GAGTC | 3 cut(s) | 67, 164, 1035 |
| PshAI | GACNNNNGTC | 2 cut(s) | 612, 984 |
| Psp124BI | GAGCTC | 1 cut(s) | 481 |
| PspPI | GGNCC | 1 cut(s) | 131 |
| PstI | CTGCAG | 1 cut(s) | 614 |
| PstNI | CAGNNNCTG | 1 cut(s) | 853 |
| PsuI | RGATCY | 2 cut(s) | 742, 856 |
| PsyI | GACNNNGTC | 1 cut(s) | 510 |
| PvuII | CAGCTG | 2 cut(s) | 68, 141 |
| SacI | GAGCTC | 1 cut(s) | 481 |
| SaqAI | TTAA | 4 cut(s) | 729, 747, 968, 1023 |
| SatI | GCNGC | 6 cut(s) | 30, 455, 774, 995, 998, 1001 |
| Sau3AI | GATC | 6 cut(s) | 264, 298, 694, 742, 829, 856 |
| Sau96I | GGNCC | 1 cut(s) | 131 |
| SchI | GAGTC | 3 cut(s) | 68, 164, 1036 |
| SduI | GDGCHC | 1 cut(s) | 481 |
| SfaNI | GCATC | 2 cut(s) | 619, 805 |
| SfcI | CTRYAG | 1 cut(s) | 610 |
| SmlI | CTYRAG | 2 cut(s) | 989, 1022 |
| SmoI | CTYRAG | 2 cut(s) | 989, 1022 |
| Sse9I | AATT | 8 cut(s) | 81, 289, 720, 735, 921, 929, 947, 1032 |
| SsiI | CCGC | 7 cut(s) | 30, 331, 344, 587, 778, 997, 1000 |
| SspMI | CTAG | 2 cut(s) | 860, 902 |
| SstI | GAGCTC | 1 cut(s) | 481 |
| StyI | CCWWGG | 1 cut(s) | 99 |
| TaaI | ACNGT | 1 cut(s) | 236 |
| TaiI | ACGT | 5 cut(s) | 426, 563, 814, 891, 968 |
| TaqI | TCGA | 4 cut(s) | 168, 267, 309, 808 |
| TasI | AATT | 8 cut(s) | 81, 289, 720, 735, 921, 929, 947, 1032 |
| TauI | GCSGC | 3 cut(s) | 32, 1000, 1003 |
| TfiI | GAWTC | 7 cut(s) | 110, 225, 324, 359, 850, 898, 956 |
| Tru1I | TTAA | 4 cut(s) | 729, 747, 968, 1023 |
| Tru9I | TTAA | 4 cut(s) | 729, 747, 968, 1023 |
| TscAI | CASTG | 2 cut(s) | 988, 1014 |
| TseI | GCWGC | 3 cut(s) | 454, 773, 994 |
| TspDTI | ATGAA | 2 cut(s) | 432, 942 |
| TspGWI | ACGGA | 1 cut(s) | 172 |
| TspRI | CASTG | 2 cut(s) | 988, 1014 |
| Tth111I | GACNNNGTC | 1 cut(s) | 510 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 853 |
| Vha464I | CTTAAG | 1 cut(s) | 1022 |
| XapI | RAATTY | 2 cut(s) | 289, 929 |
| XspI | CTAG | 2 cut(s) | 860, 902 |