Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007107

Physical Location & Seq

Genomic Coordinates Reverse (-)

20221097 .. 20223028

Gene Structure 1932 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G54630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGAGAGGCGGAGCCGCGGGAAAGAGAAGAACGACGGTGGGTTTCGGCGGAGCGCCGCCGCCACCTCCACCATCAATCGAGCAACAACGTCACCTCTTTAACTCAAGAGACTCCGACGCCAGTTTCGCCAGCAGCCGTCCTTCATCAATCGGTTTAGGCGGCCGAGGAGCCTCCGATGACAGATCTTCGATGATTCGATTCATTAACGCCTTCCTCTCCACACATAACTTCCCGATCTCTATCCGCGGTAATCCTGTTCCTTCTGTCAAAGACATCTCCGAAACCCTAAAATTCTTGCTCTCAGCTTTAGATTACCCTTGCGATTCCATCAAATGGGACGAGGATCTCGTCTTCTTTCTCAAATCGCAGAAATGTCCTTTTAAGATCACCAAATCTAGCCTCAAAGCTCCAAATACGCCTCACAATTGGCCTACTGTTCTCGCCGTTGTTCACTGGTTAGCTGAGCTTGCTCGTTTCCATCAACATCTAGTATCTAATTCCACCTCCGTACCCGAAGATAACTCCATGAATTTCTTCGCGATTCAAAGCTTTGGTCACTTCATTCGCGGCGAGGATGATAAGGTTAACGATTTAGATTCTCAATTTTTGGGTAAATTGGAAGCGGAGAAGACTAGCGTCGCTGAAACTATCTCTGGTTGTGAGAAAATCTCCGGTGAATTGGAGGCTAAACTTGAGTCACTGAGGAAAGGTCCTTCGAAGAAAGAGTCTCTGGAGAAAGTTAAAGCCGATTTGGAGAATGACGTAAACAAGTTCCGAACTATTGTTGTGGAGTATACTGATAGGAATCCAGCGATGGAGAAAGTTGTGGAGGAGAAAGCTAAGGAGCTCAAAGCTAAGGAAGAAGAGAGAGAGCGAATCTCTGTAGAGAATAAGGAGTTGAAGAAGAGTGTGGAGCTTCAGAACTTTAGCGCGGCGGATGTAAATAGGATGAGAAGAGAGTTACAAGCTGTGGAAAGAGATGTTGCGGATGCTGAGGTTGCTAGAGATGGTTGGGATCAGAAAGCTTGGGAACTCAATTCACAGATTAGGAATCAGTTTCATCAGATTCAGACACTTGCCATTGACTGCAACCAAGCTCTCAGGAGATTGAAGCTTGATATTCAGTTCGCTGTTAACGAGAGAGGGGAAACACCTGCAGCGGTGATGGGTGTGGATTATAAATCGGTGGTGAAGCCAGCTCTGTGTTCGTTGTGCGATGGGATCAAAGGAAGCTCGGCGGAGAAAGTGGAGGAATTGGTCACTTTACAGCACCATAAGTCTGAAATGGCTTCGAAGATCGAATCCAAAAGGAGTCTTCTTGGGTCAATTCAGTTGCAGATCAATGACCTCGAAGAAAAGATGAAGTTGGTGAAGAAGGAAACTCAGGAGTTGAGTACAAAATGTGATTTGGAGGCGAAAACATTGGTTGAGAGTGTGAAAGCTGAGGCTTTGAATCTGGAGGTTGTGGAGAAAGAAGCTGCTGAGTTTGTAAAAGCTTCGGAGCTTAGATTGCAAGAAGCAGTGAAGGAGAGTGAAGAGGAGGTCCAAGCATGTGCTGCACAACTCTTTGCACTTATCGATTCGATATCGAAACAGAAAGAGTACATGGATTCGAAGATATCGGAGATCAAAACCGGTGTTGCTGATACTGCCAGTGCTGTTTCAGAGATATACAAAGCCAACTTCAAGAAGAACCTTGGTATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0003674 GO:0005198 GO:0005200 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006996 GO:0007010 GO:0007049 GO:0007059 GO:0007080 GO:0008150 GO:0008608 GO:0009987 GO:0016043 GO:0022402 GO:0031262 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070013 GO:0071840 GO:0098687 GO:0098813 GO:0140014 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ndc80_HEC

Protein Analysis

568

Amino Acids

63.33

Weight (kDa)

5.89

Isoelectric Point (pI)

41.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ndc80_HEC	PF03801	37 - 162	2.2e-24	HEC/Ndc80p family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007107)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54630
fragaria_vesca	FvH4_5g35831
malus_domestica	MD08G1226900.v1.1 MD15G1419200.v1.1
prunus_persica	Prupe.1G564000_v2.0.a1
pyrus_communis	pycom08g19790 pycom15g37210
rosa_chinensis	RchiOBHm_Chr5g0046031
rosa_laevigata	RLG00000034393
rosa_multiflora	Rmu_co8491665.1_g000002 Rmu_sc0001035.1_g000029 Rmu_sc0001212.1_g000011
rosa_roxburghii	Rroxscaffold_1G00035270 Rroxscaffold_1G00035320 Rroxscaffold_3G00224020
rosa_rugosa	Rorug05G0226200 Rorug07G0304000
rosa_samantha	Rh5AG306800 Rh5BG315500 Rh5CG341700 Rh5CG342000 Rh5DG325500
rosa_wichuraiana	Rw0G011960 Rw5G028710 Rw7G038200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1179
AarI	CACCTGC	1 cut(s)	1162
Acc36I	ACCTGC	1 cut(s)	1162
AccB7I	CCANNNNNTGG	1 cut(s)	333
AccI	GTMKAC	1 cut(s)	794
AccII	CGCG	5 cut(s)	17, 246, 539, 567, 932
AclWI	GGATC	3 cut(s)	351, 1023, 1229
AcoI	YGGCCR	1 cut(s)	160
AcsI	RAATTY	2 cut(s)	290, 529
AcuI	CTGAAG	1 cut(s)	902
AcyI	GRCGYC	1 cut(s)	117
AfaI	GTAC	3 cut(s)	510, 1396, 1604
AfiI	CCNNNNNNNGG	1 cut(s)	333
AgeI	ACCGGT	1 cut(s)	1634
AgsI	TTSAA	5 cut(s)	545, 901, 1111, 1453, 1687
Alw21I	GWGCWC	1 cut(s)	849
Alw26I	GTCTC	2 cut(s)	102, 732
AlwI	GGATC	3 cut(s)	351, 1023, 1229
AoxI	GGCC	2 cut(s)	160, 428
ApeKI	GCWGC	4 cut(s)	132, 1157, 1478, 1556
ApoI	RAATTY	2 cut(s)	290, 529
ArsI	GACNNNNNNTTYG	6 cut(s)	107, 139, 538, 570, 710, 742
AsiGI	ACCGGT	1 cut(s)	1634
Asp700I	GAANNNNTTC	1 cut(s)	533
AspLEI	GCGC	2 cut(s)	55, 932
AspS9I	GGNCC	2 cut(s)	710, 1543
AsuHPI	GGTGA	6 cut(s)	83, 379, 686, 1174, 1201, 1381
AsuII	TTCGAA	3 cut(s)	716, 1292, 1613
AvaII	GGWCC	2 cut(s)	710, 1543
BaeI	ACNNNNGTAYC	3 cut(s)	492, 525, 1684
BanII	GRGCYC	1 cut(s)	849
BbsI	GAAGAC	3 cut(s)	343, 635, 1307
Bbv12I	GWGCWC	1 cut(s)	849
BbvCI	CCTCAGC	2 cut(s)	993, 1443
BbvI	GCAGC	4 cut(s)	144, 1169, 1465, 1543
BccI	CCATC	7 cut(s)	79, 335, 486, 808, 1001, 1159, 1211
BceAI	ACGGC	2 cut(s)	120, 428
BcoDI	GTCTC	2 cut(s)	102, 732
BfaI	CTAG	5 cut(s)	396, 488, 633, 1002, 1705
BfmI	CTRYAG	2 cut(s)	882, 1155
BfoI	RGCGCY	1 cut(s)	56
BfuAI	ACCTGC	1 cut(s)	1162
BglII	AGATCT	1 cut(s)	182
BlpI	GCTNAGC	1 cut(s)	462
Bme18I	GGWCC	2 cut(s)	710, 1543
BmgT120I	GGNCC	2 cut(s)	710, 1543
BmiI	GGNNCC	2 cut(s)	13, 169
BmsI	GCATC	1 cut(s)	979
BoxI	GACNNNNGTC	1 cut(s)	635
BpiI	GAAGAC	3 cut(s)	343, 635, 1307
BplI	GAGNNNNNCTC	4 cut(s)	653, 685, 863, 895
BpmI	CTGGAG	2 cut(s)	752, 1478
Bpu10I	CCTNAGC	4 cut(s)	840, 855, 993, 1443
Bpu1102I	GCTNAGC	1 cut(s)	462
Bpu14I	TTCGAA	3 cut(s)	716, 1292, 1613
BpuEI	CTTGAG	2 cut(s)	88, 713
Bsa29I	ATCGAT	1 cut(s)	1578
BsaBI	GATNNNNATC	2 cut(s)	239, 804
BsaHI	GRCGYC	1 cut(s)	117
BsaJI	CCNNGG	4 cut(s)	15, 163, 244, 1696
BsaWI	WCCGGW	2 cut(s)	671, 1634
Bsc4I	CCNNNNNNNGG	1 cut(s)	333
Bse118I	RCCGGY	1 cut(s)	1634
Bse1I	ACTGG	3 cut(s)	120, 458, 1653
Bse8I	GATNNNNATC	2 cut(s)	239, 804
BseCI	ATCGAT	1 cut(s)	1578
BseDI	CCNNGG	4 cut(s)	15, 163, 244, 1696
BseGI	GGATG	4 cut(s)	580, 943, 954, 994
BseJI	GATNNNNATC	2 cut(s)	239, 804
BseLI	CCNNNNNNNGG	1 cut(s)	333
BseMII	CTCAG	8 cut(s)	315, 453, 692, 984, 1114, 1397, 1434, 1473
BseNI	ACTGG	3 cut(s)	120, 458, 1653
BseRI	GAGGAG	3 cut(s)	180, 845, 1553
BseX3I	CGGCCG	1 cut(s)	160
BseXI	GCAGC	4 cut(s)	144, 1169, 1465, 1543
BsgI	GTGCAG	1 cut(s)	1542
Bsh1236I	CGCG	5 cut(s)	17, 246, 539, 567, 932
Bsh1285I	CGRYCG	1 cut(s)	163
BshFI	GGCC	2 cut(s)	162, 430
BshTI	ACCGGT	1 cut(s)	1634
BshVI	ATCGAT	1 cut(s)	1578
BsiEI	CGRYCG	1 cut(s)	163
BsiHKAI	GWGCWC	1 cut(s)	849
BsiSI	CCGG	2 cut(s)	672, 1635
BslFI	GGGAC	1 cut(s)	350
BslI	CCNNNNNNNGG	1 cut(s)	333
BsmAI	GTCTC	2 cut(s)	102, 732
BsmFI	GGGAC	1 cut(s)	350
BsnI	GGCC	2 cut(s)	162, 430
Bsp119I	TTCGAA	3 cut(s)	716, 1292, 1613
Bsp1286I	GDGCHC	1 cut(s)	849
Bsp143I	GATC	9 cut(s)	182, 234, 343, 384, 1015, 1221, 1296, 1338, 1626
Bsp1720I	GCTNAGC	1 cut(s)	462
Bsp68I	TCGCGA	1 cut(s)	539
BspANI	GGCC	2 cut(s)	162, 430
BspCNI	CTCAG	8 cut(s)	314, 454, 693, 985, 1113, 1396, 1435, 1474
BspDI	ATCGAT	1 cut(s)	1578
BspFNI	CGCG	5 cut(s)	17, 246, 539, 567, 932
BspLI	GGNNCC	2 cut(s)	13, 169
BspMAI	CTGCAG	1 cut(s)	1159
BspMI	ACCTGC	1 cut(s)	1162
BspPI	GGATC	3 cut(s)	351, 1023, 1229
BspT104I	TTCGAA	3 cut(s)	716, 1292, 1613
BsrFI	RCCGGY	1 cut(s)	1634
BsrI	ACTGG	3 cut(s)	120, 458, 1653
BssAI	RCCGGY	1 cut(s)	1634
BssECI	CCNNGG	4 cut(s)	15, 163, 244, 1696
BssMI	GATC	9 cut(s)	182, 234, 343, 384, 1015, 1221, 1296, 1338, 1626
BssNAI	GTATAC	1 cut(s)	795
BssNI	GRCGYC	1 cut(s)	117
BssT1I	CCWWGG	1 cut(s)	1696
Bst1107I	GTATAC	1 cut(s)	795
Bst4CI	ACNGT	2 cut(s)	37, 436
Bst6I	CTCTTC	4 cut(s)	858, 899, 949, 1530
BstACI	GRCGYC	1 cut(s)	117
BstAPI	GCANNNNNTGC	1 cut(s)	1556
BstBI	TTCGAA	3 cut(s)	716, 1292, 1613
BstC8I	GCNNGC	3 cut(s)	130, 468, 1197
BstDSI	CCRYGG	2 cut(s)	15, 244
BstF5I	GGATG	4 cut(s)	580, 943, 954, 994
BstFNI	CGCG	5 cut(s)	17, 246, 539, 567, 932
BstH2I	RGCGCY	1 cut(s)	56
BstHHI	GCGC	2 cut(s)	55, 932
BstKTI	GATC	9 cut(s)	185, 237, 346, 387, 1018, 1224, 1299, 1341, 1629
BstMAI	GTCTC	2 cut(s)	102, 732
BstMBI	GATC	9 cut(s)	182, 234, 343, 384, 1015, 1221, 1296, 1338, 1626
BstMCI	CGRYCG	1 cut(s)	163
BstMWI	GCNNNNNNNGC	6 cut(s)	125, 467, 998, 1510, 1556, 1649
BstNSI	RCATGY	1 cut(s)	1554
BstPAI	GACNNNNGTC	1 cut(s)	635
BstSFI	CTRYAG	2 cut(s)	882, 1155
BstUI	CGCG	5 cut(s)	17, 246, 539, 567, 932
BstV1I	GCAGC	4 cut(s)	144, 1169, 1465, 1543
BstV2I	GAAGAC	3 cut(s)	343, 635, 1307
BstX2I	RGATCY	2 cut(s)	182, 343
BstYI	RGATCY	2 cut(s)	182, 343
BstZ17I	GTATAC	1 cut(s)	795
BstZI	CGGCCG	1 cut(s)	160
Bsu15I	ATCGAT	1 cut(s)	1578
BsuRI	GGCC	2 cut(s)	162, 430
BsuTUI	ATCGAT	1 cut(s)	1578
BtgI	CCRYGG	2 cut(s)	15, 244
BtgZI	GCGATG	2 cut(s)	827, 1230
BtsCI	GGATG	4 cut(s)	580, 943, 954, 994
BtsI	GCAGTG	1 cut(s)	1527
BtsIMutI	CAGTG	4 cut(s)	451, 698, 1527, 1660
BtuMI	TCGCGA	1 cut(s)	539
BveI	ACCTGC	1 cut(s)	1162
Cac8I	GCNNGC	3 cut(s)	130, 468, 1197
CfoI	GCGC	2 cut(s)	55, 932
Cfr10I	RCCGGY	1 cut(s)	1634
Cfr13I	GGNCC	2 cut(s)	710, 1543
Cfr42I	CCGCGG	2 cut(s)	18, 247
ClaI	ATCGAT	1 cut(s)	1578
CseI	GACGC	2 cut(s)	125, 625
Csp6I	GTAC	3 cut(s)	509, 1395, 1603
CspAI	ACCGGT	1 cut(s)	1634
CviAII	CATG	3 cut(s)	526, 1551, 1606
CviQI	GTAC	3 cut(s)	509, 1395, 1603
DpnI	GATC	9 cut(s)	184, 236, 345, 386, 1017, 1223, 1298, 1340, 1628
DpnII	GATC	9 cut(s)	182, 234, 343, 384, 1015, 1221, 1296, 1338, 1626
EaeI	YGGCCR	1 cut(s)	160
EagI	CGGCCG	1 cut(s)	160
Eam1104I	CTCTTC	4 cut(s)	858, 899, 949, 1530
EarI	CTCTTC	4 cut(s)	858, 899, 949, 1530
EciI	GGCGGA	4 cut(s)	24, 63, 950, 1253
Ecl136II	GAGCTC	1 cut(s)	847
EclXI	CGGCCG	1 cut(s)	160
Eco130I	CCWWGG	1 cut(s)	1696
Eco24I	GRGCYC	1 cut(s)	849
Eco32I	GATATC	2 cut(s)	1587, 1620
Eco47I	GGWCC	2 cut(s)	710, 1543
Eco52I	CGGCCG	1 cut(s)	160
Eco53kI	GAGCTC	1 cut(s)	847
Eco57I	CTGAAG	1 cut(s)	902
EcoICRI	GAGCTC	1 cut(s)	847
EcoO109I	RGGNCCY	1 cut(s)	710
EcoRV	GATATC	2 cut(s)	1587, 1620
EcoT14I	CCWWGG	1 cut(s)	1696
EcoT38I	GRGCYC	1 cut(s)	849
ErhI	CCWWGG	1 cut(s)	1696
FaeI	CATG	3 cut(s)	529, 1554, 1609
FaiI	YATR	8 cut(s)	225, 527, 795, 1179, 1275, 1552, 1607, 1672
FaqI	GGGAC	1 cut(s)	350
FatI	CATG	3 cut(s)	525, 1550, 1605
FauI	CCCGC	1 cut(s)	10
FblI	GTMKAC	1 cut(s)	794
FokI	GGATG	4 cut(s)	587, 950, 961, 1001
FriOI	GRGCYC	1 cut(s)	849
FspBI	CTAG	5 cut(s)	396, 488, 633, 1002, 1705
GlaI	GCGC	2 cut(s)	54, 931
GsuI	CTGGAG	2 cut(s)	752, 1478
HaeII	RGCGCY	1 cut(s)	56
HaeIII	GGCC	2 cut(s)	162, 430
HapII	CCGG	2 cut(s)	672, 1635
HgaI	GACGC	2 cut(s)	125, 625
HhaI	GCGC	2 cut(s)	55, 932
Hin1I	GRCGYC	1 cut(s)	117
Hin1II	CATG	3 cut(s)	529, 1554, 1609
Hin6I	GCGC	2 cut(s)	53, 930
HinP1I	GCGC	2 cut(s)	53, 930
HincII	GTYRAC	2 cut(s)	586, 1135
HindII	GTYRAC	2 cut(s)	586, 1135
HindIII	AAGCTT	4 cut(s)	547, 1023, 1112, 1494
HpaI	GTTAAC	2 cut(s)	586, 1135
HpaII	CCGG	2 cut(s)	672, 1635
HphI	GGTGA	6 cut(s)	83, 379, 686, 1174, 1201, 1381
Hpy166II	GTNNAC	5 cut(s)	451, 586, 766, 795, 1135
Hpy188III	TCNNGA	8 cut(s)	105, 232, 538, 731, 1102, 1385, 1457, 1687
Hpy8I	GTNNAC	5 cut(s)	451, 586, 766, 795, 1135
Hpy99I	CGWCG	3 cut(s)	37, 119, 641
HpyAV	CCTTC	6 cut(s)	150, 220, 270, 723, 1369, 1519
HpyCH4III	ACNGT	2 cut(s)	37, 436
HpyCH4IV	ACGT	2 cut(s)	88, 762
HpyCH4V	TGCA	6 cut(s)	1089, 1157, 1336, 1513, 1559, 1571
HpyF10VI	GCNNNNNNNGC	6 cut(s)	125, 467, 998, 1510, 1556, 1649
HpySE526I	ACGT	2 cut(s)	88, 762
Hsp92I	GRCGYC	1 cut(s)	117
Hsp92II	CATG	3 cut(s)	529, 1554, 1609
HspAI	GCGC	2 cut(s)	53, 930
KspAI	GTTAAC	2 cut(s)	586, 1135
KspI	CCGCGG	2 cut(s)	18, 247
Kzo9I	GATC	9 cut(s)	182, 234, 343, 384, 1015, 1221, 1296, 1338, 1626
LmnI	GCTCC	7 cut(s)	11, 50, 167, 412, 844, 913, 1501
Lsp1109I	GCAGC	4 cut(s)	144, 1169, 1465, 1543
LweI	GCATC	1 cut(s)	979
MaeI	CTAG	5 cut(s)	396, 488, 633, 1002, 1705
MaeII	ACGT	2 cut(s)	88, 762
MaeIII	GTNAC	5 cut(s)	89, 554, 696, 960, 1258
MalI	GATC	9 cut(s)	184, 236, 345, 386, 1017, 1223, 1298, 1340, 1628
MboI	GATC	9 cut(s)	182, 234, 343, 384, 1015, 1221, 1296, 1338, 1626
MfeI	CAATTG	1 cut(s)	424
MflI	RGATCY	2 cut(s)	182, 343
MhlI	GDGCHC	1 cut(s)	849
MlyI	GAGTC	4 cut(s)	104, 704, 734, 1321
MmeI	TCCRAC	1 cut(s)	138
MroXI	GAANNNNTTC	1 cut(s)	533
MseI	TTAA	6 cut(s)	99, 204, 381, 585, 741, 1134
MspA1I	CMGCKG	3 cut(s)	17, 246, 1160
MspI	CCGG	2 cut(s)	672, 1635
MunI	CAATTG	1 cut(s)	424
MvnI	CGCG	5 cut(s)	17, 246, 539, 567, 932
MwoI	GCNNNNNNNGC	6 cut(s)	125, 467, 998, 1510, 1556, 1649
NdeII	GATC	9 cut(s)	182, 234, 343, 384, 1015, 1221, 1296, 1338, 1626
NlaIII	CATG	3 cut(s)	529, 1554, 1609
NlaIV	GGNNCC	2 cut(s)	13, 169
NmeAIII	GCCGAG	2 cut(s)	188, 1214
NmuCI	GTSAC	4 cut(s)	89, 554, 696, 1258
NruI	TCGCGA	1 cut(s)	539
NspI	RCATGY	1 cut(s)	1554
NspV	TTCGAA	3 cut(s)	716, 1292, 1613
PaqCI	CACCTGC	1 cut(s)	1162
PcsI	WCGNNNNNNNCGW	2 cut(s)	345, 1134
PdmI	GAANNNNTTC	1 cut(s)	533
PflMI	CCANNNNNTGG	1 cut(s)	333
PinAI	ACCGGT	1 cut(s)	1634
PleI	GAGTC	4 cut(s)	104, 703, 733, 1320
PpsI	GAGTC	4 cut(s)	104, 703, 733, 1320
PpuMI	RGGWCCY	1 cut(s)	710
PshAI	GACNNNNGTC	1 cut(s)	635
PsiI	TTATAA	1 cut(s)	1179
Psp124BI	GAGCTC	1 cut(s)	849
Psp5II	RGGWCCY	1 cut(s)	710
PspN4I	GGNNCC	2 cut(s)	13, 169
PspPI	GGNCC	2 cut(s)	710, 1543
PspPPI	RGGWCCY	1 cut(s)	710
PstI	CTGCAG	1 cut(s)	1159
PsuI	RGATCY	2 cut(s)	182, 343
RruI	TCGCGA	1 cut(s)	539
RsaI	GTAC	3 cut(s)	510, 1396, 1604
RsaNI	GTAC	3 cut(s)	509, 1395, 1603
SacI	GAGCTC	1 cut(s)	849
SacII	CCGCGG	2 cut(s)	18, 247
SaqAI	TTAA	6 cut(s)	99, 204, 381, 585, 741, 1134
Sau3AI	GATC	9 cut(s)	182, 234, 343, 384, 1015, 1221, 1296, 1338, 1626
Sau96I	GGNCC	2 cut(s)	710, 1543
SchI	GAGTC	4 cut(s)	104, 704, 734, 1321
SduI	GDGCHC	1 cut(s)	849
SfaNI	GCATC	1 cut(s)	979
SfcI	CTRYAG	2 cut(s)	882, 1155
Sfr303I	CCGCGG	2 cut(s)	18, 247
SfuI	TTCGAA	3 cut(s)	716, 1292, 1613
SgrBI	CCGCGG	2 cut(s)	18, 247
SinI	GGWCC	2 cut(s)	710, 1543
SmlI	CTYRAG	2 cut(s)	103, 692
SmoI	CTYRAG	2 cut(s)	103, 692
SspMI	CTAG	5 cut(s)	396, 488, 633, 1002, 1705
SstI	GAGCTC	1 cut(s)	849
StyI	CCWWGG	1 cut(s)	1696
TaaI	ACNGT	2 cut(s)	37, 436
TaiI	ACGT	2 cut(s)	91, 765
TatI	WGTACW	2 cut(s)	1394, 1602
TauI	GCSGC	6 cut(s)	17, 58, 61, 162, 570, 935
Tru1I	TTAA	6 cut(s)	99, 204, 381, 585, 741, 1134
Tru9I	TTAA	6 cut(s)	99, 204, 381, 585, 741, 1134
TscAI	CASTG	4 cut(s)	458, 705, 1527, 1660
TseFI	GTSAC	4 cut(s)	89, 554, 696, 1258
TseI	GCWGC	4 cut(s)	132, 1157, 1478, 1556
Tsp45I	GTSAC	4 cut(s)	89, 554, 696, 1258
TspDTI	ATGAA	6 cut(s)	132, 190, 542, 550, 1049, 1376
TspGWI	ACGGA	1 cut(s)	496
TspRI	CASTG	4 cut(s)	458, 705, 1527, 1660
Van91I	CCANNNNNTGG	1 cut(s)	333
VpaK11BI	GGWCC	2 cut(s)	710, 1543
XapI	RAATTY	2 cut(s)	290, 529
XceI	RCATGY	1 cut(s)	1554
XmiI	GTMKAC	1 cut(s)	794
XmnI	GAANNNNTTC	1 cut(s)	533
XspI	CTAG	5 cut(s)	396, 488, 633, 1002, 1705

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.