Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0007107

Physical Location & Seq

Genomic Coordinates Reverse (-)

42621821 .. 42627394

Gene Structure 5574 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG325500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGAGAGGCAGTCGGCGACCCAAGCCGTCGATGAACCCACGGCCACCGCCACCATCAACGCCGCTCGAGCACTTCCGCCACCGCGACTCCGACGCAAGCTTCGCAAGCAGCCGCCCCTCCTCGATCGGAATCGGCGGCGGTCCCGGCGGCTCCATCGCAAACGTCGACCTATACAAAGACCGCTCCTACCAGCAATCCGCGCTCTCCGCCATCAATTCCTACCTTTCCTCTCACTCCGTCCAAGTCTTCCTCAAATTCCCGATCCCTCCCGCCAGAGAGATCACCGAAGCCCTGAAATTCCTCGTCGCCCGGCTCGATTGGCCGTCGCCGAAGCTCGAAGACGACCTTCCGGTGATTCTGAAATCCCTGAAATGCCCTTTCAAGCTCAACAAGTCCATGATTCGAAACCCTACGGTGAATTCGCACCAGTGGCCGAATCTGCTCGCTGTGATTCACTGGCTGTTCCAGCTTGTTCGTTATAACGATCACCTGGAGCAGAATTCGGAGGCGTTTCTGGACAACAACCCTGTGGGTCAGTACACGTTGCAGAGCTACTTGCATTATATAAGGGGCCAAGATGATGAAGCTGAGGAGGTGGATCGTGAGTTTGTGGGGAAGTTCGAGAGGCAGAGGGACGAATCGGAGGAGCAATTGAAGGTTCTGCAGCAGCATGCGACGGAGCTGGAGGCGGAAGTGGAGGCCTTGAGGTCGGAGCCGTCGCCTAAGGAGGCATTGGAGAGGGAGAAGAGTATGCTGGAAGAGGATGTGAGCAAGTTCCATGAGATGATTGAGAATCTCGACAAGAATGTGAAGAAACTGCAGAAAGTTTTGGAGGAGAAAGAGAAGGCATTGGAGGCCAAGAGGGAAGAGAAGAAGAGGATTTTACAGGAGAATGAGGAGCTGAAGAAGAGAGTCGAATCGCAGAGTTTTAATGAGAGGGATGTGGAGAGAATGAAGAGGGAATTGCAGGCTGTGGAGAGGGACATTGGGGAAGCCGAGCTGGCTAGGAATGTGTGGGAGGAGAAGGTTTGGGAATTGGATAACACGCTCAGCCCAAAGGTTAAGGAGTTGGAGGCTTTGGCAATGGAGTGCAACCAAGTCATGAGGAGGTTGAAACTTTGTAATGGCTTTCAGTATGTATTGAATCCTAAGGGATCAACACCTGCTGAGGTGATGGGAGTTGACTATAAATCAACTTTAAAGCCTGCACTTGACTCATACTCTCAAAAAATAAAGAAGGATTCTGTGGAAACACTGGATGGGTTGATTTTGCTTCAGCATCAGTCGAGTGCACTTTCTGCTGATATTGAGGAAAAAAGAAATGATATATCAACACTTCAGTCGCGTCTTGATGAAGTAAGTGGATCAAAGCTAAGTCTTCTAGACAGATTATTGTTTCTGCATGGGAAACAAATGAGTTCGTTTATTACAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0003674 GO:0005198 GO:0005200 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006996 GO:0007010 GO:0007049 GO:0007059 GO:0007080 GO:0008150 GO:0008608 GO:0009987 GO:0016043 GO:0022402 GO:0031262 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070013 GO:0071840 GO:0098687 GO:0098813 GO:0140014 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ndc80_HEC

Protein Analysis

478

Amino Acids

54.92

Weight (kDa)

5.75

Isoelectric Point (pI)

55.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ndc80_HEC	PF03801	59 - 163	6.8e-16	HEC/Ndc80p family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007107)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54630
fragaria_vesca	FvH4_5g35831
malus_domestica	MD08G1226900.v1.1 MD15G1419200.v1.1
prunus_persica	Prupe.1G564000_v2.0.a1
pyrus_communis	pycom08g19790 pycom15g37210
rosa_chinensis	RchiOBHm_Chr5g0046031
rosa_laevigata	RLG00000034393
rosa_multiflora	Rmu_co8491665.1_g000002 Rmu_sc0001035.1_g000029 Rmu_sc0001212.1_g000011
rosa_roxburghii	Rroxscaffold_1G00035270 Rroxscaffold_1G00035320 Rroxscaffold_3G00224020
rosa_rugosa	Rorug05G0226200 Rorug07G0304000
rosa_samantha	Rh5AG306800 Rh5BG315500 Rh5CG341700 Rh5CG342000 Rh5DG325500
rosa_wichuraiana	Rw0G011960 Rw5G028710 Rw7G038200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	480
AarI	CACCTGC	1 cut(s)	1171
Acc36I	ACCTGC	1 cut(s)	1171
AccBSI	CCGCTC	2 cut(s)	64, 183
AccI	GTMKAC	1 cut(s)	165
AccII	CGCG	3 cut(s)	84, 200, 1345
AclWI	GGATC	4 cut(s)	256, 606, 1162, 1372
AcoI	YGGCCR	3 cut(s)	41, 320, 431
AcsI	RAATTY	4 cut(s)	254, 296, 418, 499
AcuI	CTGAAG	3 cut(s)	923, 1259, 1322
AfaI	GTAC	1 cut(s)	539
AflIII	ACRYGT	1 cut(s)	540
AgsI	TTSAA	4 cut(s)	382, 655, 1114, 1144
AjnI	CCWGG	1 cut(s)	489
Alw21I	GWGCWC	2 cut(s)	72, 1294
Alw44I	GTGCAC	1 cut(s)	1290
AlwI	GGATC	4 cut(s)	256, 606, 1162, 1372
Ama87I	CYCGRG	1 cut(s)	65
AoxI	GGCC	6 cut(s)	41, 320, 431, 571, 699, 855
ApaLI	GTGCAC	1 cut(s)	1290
ApeKI	GCWGC	3 cut(s)	108, 664, 667
ApoI	RAATTY	4 cut(s)	254, 296, 418, 499
ArsI	GACNNNNNNTTYG	2 cut(s)	83, 115
AspLEI	GCGC	1 cut(s)	202
AspS9I	GGNCC	2 cut(s)	140, 571
AsuC2I	CCSGG	2 cut(s)	144, 310
AsuHPI	GGTGA	5 cut(s)	274, 364, 427, 479, 1183
AsuII	TTCGAA	1 cut(s)	403
AvaI	CYCGRG	1 cut(s)	65
AvaII	GGWCC	1 cut(s)	140
AxyI	CCTNAGG	2 cut(s)	723, 1149
BaeGI	GKGCMC	1 cut(s)	1294
BbsI	GAAGAC	3 cut(s)	238, 345, 1370
Bbv12I	GWGCWC	2 cut(s)	72, 1294
BbvCI	CCTCAGC	2 cut(s)	588, 1167
BbvI	GCAGC	3 cut(s)	120, 676, 679
BccI	CCATC	5 cut(s)	61, 161, 218, 1168, 1253
BceAI	ACGGC	4 cut(s)	10, 56, 307, 700
BciT130I	CCWGG	1 cut(s)	491
BcnI	CCSGG	2 cut(s)	144, 310
BfaI	CTAG	2 cut(s)	1005, 1382
BfmI	CTRYAG	2 cut(s)	662, 818
BfuAI	ACCTGC	1 cut(s)	1171
BglI	GCCNNNNNGGC	1 cut(s)	1001
BisI	GCNGC	7 cut(s)	62, 109, 112, 136, 148, 665, 668
BlpI	GCTNAGC	1 cut(s)	1049
BlsI	GCNGC	7 cut(s)	63, 110, 113, 137, 149, 666, 669
Bme1390I	CCNGG	3 cut(s)	144, 310, 491
Bme18I	GGWCC	1 cut(s)	140
BmeT110I	CYCGRG	1 cut(s)	65
BmgT120I	GGNCC	2 cut(s)	140, 571
BmiI	GGNNCC	4 cut(s)	142, 151, 572, 714
BmrFI	CCNGG	3 cut(s)	144, 310, 491
BmsI	GCATC	1 cut(s)	1288
BpiI	GAAGAC	3 cut(s)	238, 345, 1370
BpmI	CTGGAG	2 cut(s)	512, 704
Bpu10I	CCTNAGC	2 cut(s)	588, 1167
Bpu1102I	GCTNAGC	1 cut(s)	1049
Bpu14I	TTCGAA	1 cut(s)	403
BpuEI	CTTGAG	1 cut(s)	724
BpuMI	CCSGG	2 cut(s)	144, 310
BsaBI	GATNNNNATC	1 cut(s)	128
BsaJI	CCNNGG	1 cut(s)	38
BsaWI	WCCGGW	1 cut(s)	349
BsaXI	ACNNNNNCTCC	2 cut(s)	71, 101
Bse1I	ACTGG	3 cut(s)	427, 461, 1260
Bse21I	CCTNAGG	2 cut(s)	723, 1149
Bse3DI	GCAATG	1 cut(s)	1089
Bse8I	GATNNNNATC	1 cut(s)	128
BseBI	CCWGG	1 cut(s)	491
BseDI	CCNNGG	1 cut(s)	38
BseGI	GGATG	3 cut(s)	769, 946, 1264
BseJI	GATNNNNATC	1 cut(s)	128
BseMI	GCAATG	1 cut(s)	1089
BseMII	CTCAG	3 cut(s)	579, 1063, 1158
BseNI	ACTGG	3 cut(s)	427, 461, 1260
BseRI	GAGGAG	7 cut(s)	109, 605, 659, 848, 911, 1034, 1120
BseSI	GKGCMC	1 cut(s)	1294
BseXI	GCAGC	3 cut(s)	120, 676, 679
BsgI	GTGCAG	1 cut(s)	1191
Bsh1236I	CGCG	3 cut(s)	84, 200, 1345
Bsh1285I	CGRYCG	1 cut(s)	126
BshFI	GGCC	6 cut(s)	43, 322, 433, 573, 701, 857
BsiEI	CGRYCG	1 cut(s)	126
BsiHKAI	GWGCWC	2 cut(s)	72, 1294
BsiHKCI	CYCGRG	1 cut(s)	65
BsiSI	CCGG	3 cut(s)	144, 310, 350
BslFI	GGGAC	3 cut(s)	126, 647, 995
BsmFI	GGGAC	3 cut(s)	126, 647, 995
BsnI	GGCC	6 cut(s)	43, 322, 433, 573, 701, 857
BsoBI	CYCGRG	1 cut(s)	65
Bsp119I	TTCGAA	1 cut(s)	403
Bsp1286I	GDGCHC	2 cut(s)	72, 1294
Bsp143I	GATC	7 cut(s)	123, 261, 279, 484, 598, 1154, 1364
Bsp1720I	GCTNAGC	1 cut(s)	1049
BspANI	GGCC	6 cut(s)	43, 322, 433, 573, 701, 857
BspCNI	CTCAG	3 cut(s)	580, 1062, 1159
BspFNI	CGCG	3 cut(s)	84, 200, 1345
BspHI	TCATGA	1 cut(s)	1101
BspLI	GGNNCC	4 cut(s)	142, 151, 572, 714
BspMAI	CTGCAG	2 cut(s)	666, 822
BspMI	ACCTGC	1 cut(s)	1171
BspPI	GGATC	4 cut(s)	256, 606, 1162, 1372
BspT104I	TTCGAA	1 cut(s)	403
BsrBI	CCGCTC	2 cut(s)	64, 183
BsrDI	GCAATG	1 cut(s)	1089
BsrI	ACTGG	3 cut(s)	427, 461, 1260
BssECI	CCNNGG	1 cut(s)	38
BssMI	GATC	7 cut(s)	123, 261, 279, 484, 598, 1154, 1364
Bst2UI	CCWGG	1 cut(s)	491
Bst4CI	ACNGT	1 cut(s)	415
Bst6I	CTCTTC	6 cut(s)	740, 753, 861, 869, 902, 950
BstAPI	GCANNNNNTGC	1 cut(s)	1298
BstBI	TTCGAA	1 cut(s)	403
BstC8I	GCNNGC	7 cut(s)	97, 106, 444, 672, 969, 1002, 1206
BstDEI	CTNAG	6 cut(s)	588, 723, 1049, 1149, 1167, 1373
BstDSI	CCRYGG	1 cut(s)	38
BstF5I	GGATG	3 cut(s)	769, 946, 1264
BstFNI	CGCG	3 cut(s)	84, 200, 1345
BstHHI	GCGC	1 cut(s)	202
BstKTI	GATC	7 cut(s)	126, 264, 282, 487, 601, 1157, 1367
BstMBI	GATC	7 cut(s)	123, 261, 279, 484, 598, 1154, 1364
BstMCI	CGRYCG	1 cut(s)	126
BstNI	CCWGG	1 cut(s)	491
BstNSI	RCATGY	1 cut(s)	674
BstSCI	CCNGG	3 cut(s)	142, 308, 489
BstSFI	CTRYAG	2 cut(s)	662, 818
BstSLI	GKGCMC	1 cut(s)	1294
BstUI	CGCG	3 cut(s)	84, 200, 1345
BstV1I	GCAGC	3 cut(s)	120, 676, 679
BstV2I	GAAGAC	3 cut(s)	238, 345, 1370
Bsu36I	CCTNAGG	2 cut(s)	723, 1149
BsuRI	GGCC	6 cut(s)	43, 322, 433, 573, 701, 857
BtgI	CCRYGG	1 cut(s)	38
BtgZI	GCGATG	1 cut(s)	139
BtsCI	GGATG	3 cut(s)	769, 946, 1264
BtsIMutI	CAGTG	3 cut(s)	434, 454, 1253
BveI	ACCTGC	1 cut(s)	1171
Cac8I	GCNNGC	7 cut(s)	97, 106, 444, 672, 969, 1002, 1206
CciI	TCATGA	1 cut(s)	1101
CfoI	GCGC	1 cut(s)	202
Cfr13I	GGNCC	2 cut(s)	140, 571
CseI	GACGC	2 cut(s)	101, 1334
Csp6I	GTAC	1 cut(s)	538
CviAII	CATG	5 cut(s)	397, 671, 779, 1102, 1403
CviQI	GTAC	1 cut(s)	538
DdeI	CTNAG	6 cut(s)	588, 723, 1049, 1149, 1167, 1373
DpnI	GATC	7 cut(s)	125, 263, 281, 486, 600, 1156, 1366
DpnII	GATC	7 cut(s)	123, 261, 279, 484, 598, 1154, 1364
DraI	TTTAAA	1 cut(s)	1200
EaeI	YGGCCR	3 cut(s)	41, 320, 431
Eam1104I	CTCTTC	6 cut(s)	740, 753, 861, 869, 902, 950
EarI	CTCTTC	6 cut(s)	740, 753, 861, 869, 902, 950
EciI	GGCGGA	3 cut(s)	65, 196, 704
Eco147I	AGGCCT	1 cut(s)	701
Eco47I	GGWCC	1 cut(s)	140
Eco57I	CTGAAG	3 cut(s)	923, 1259, 1322
Eco81I	CCTNAGG	2 cut(s)	723, 1149
Eco88I	CYCGRG	1 cut(s)	65
EcoRI	GAATTC	2 cut(s)	418, 499
EcoRII	CCWGG	1 cut(s)	489
FaeI	CATG	5 cut(s)	400, 674, 782, 1105, 1406
FalI	AAGNNNNNCTT	2 cut(s)	330, 362
FaqI	GGGAC	3 cut(s)	126, 647, 995
FatI	CATG	5 cut(s)	396, 670, 778, 1101, 1402
FauI	CCCGC	1 cut(s)	277
FblI	GTMKAC	1 cut(s)	165
Fnu4HI	GCNGC	7 cut(s)	62, 109, 112, 136, 148, 665, 668
FokI	GGATG	3 cut(s)	776, 953, 1271
Fsp4HI	GCNGC	7 cut(s)	62, 109, 112, 136, 148, 665, 668
FspBI	CTAG	2 cut(s)	1005, 1382
GlaI	GCGC	1 cut(s)	201
GluI	GCNGC	7 cut(s)	62, 109, 112, 136, 148, 665, 668
GsuI	CTGGAG	2 cut(s)	512, 704
HaeIII	GGCC	6 cut(s)	43, 322, 433, 573, 701, 857
HapII	CCGG	3 cut(s)	144, 310, 350
HgaI	GACGC	2 cut(s)	101, 1334
HhaI	GCGC	1 cut(s)	202
Hin1II	CATG	5 cut(s)	400, 674, 782, 1105, 1406
Hin6I	GCGC	1 cut(s)	200
HinP1I	GCGC	1 cut(s)	200
HincII	GTYRAC	2 cut(s)	166, 1183
HindII	GTYRAC	2 cut(s)	166, 1183
HindIII	AAGCTT	1 cut(s)	97
HpaII	CCGG	3 cut(s)	144, 310, 350
HphI	GGTGA	5 cut(s)	274, 364, 427, 479, 1183
Hpy166II	GTNNAC	4 cut(s)	166, 540, 1183, 1292
Hpy188I	TCNGA	6 cut(s)	91, 128, 360, 505, 643, 712
Hpy188III	TCNNGA	8 cut(s)	259, 515, 602, 622, 797, 1102, 1349, 1382
Hpy8I	GTNNAC	4 cut(s)	166, 540, 1183, 1292
Hpy99I	CGWCG	7 cut(s)	31, 95, 167, 308, 328, 679, 721
HpyAV	CCTTC	5 cut(s)	356, 649, 838, 1018, 1231
HpyCH4III	ACNGT	1 cut(s)	415
HpyCH4IV	ACGT	2 cut(s)	162, 542
HpyCH4V	TGCA	9 cut(s)	547, 559, 664, 820, 967, 1092, 1208, 1292, 1402
HpyF3I	CTNAG	6 cut(s)	588, 723, 1049, 1149, 1167, 1373
HpySE526I	ACGT	2 cut(s)	162, 542
Hsp92II	CATG	5 cut(s)	400, 674, 782, 1105, 1406
HspAI	GCGC	1 cut(s)	200
Kzo9I	GATC	7 cut(s)	123, 261, 279, 484, 598, 1154, 1364
LmnI	GCTCC	7 cut(s)	155, 188, 493, 646, 679, 712, 898
Lsp1109I	GCAGC	3 cut(s)	120, 676, 679
LweI	GCATC	1 cut(s)	1288
MaeI	CTAG	2 cut(s)	1005, 1382
MaeII	ACGT	2 cut(s)	162, 542
MalI	GATC	7 cut(s)	125, 263, 281, 486, 600, 1156, 1366
MbiI	CCGCTC	2 cut(s)	64, 183
MboI	GATC	7 cut(s)	123, 261, 279, 484, 598, 1154, 1364
MfeI	CAATTG	1 cut(s)	650
MhlI	GDGCHC	2 cut(s)	72, 1294
MluCI	AATT	8 cut(s)	214, 254, 296, 418, 499, 650, 962, 1034
MlyI	GAGTC	3 cut(s)	80, 921, 1208
MmeI	TCCRAC	3 cut(s)	114, 690, 1050
MseI	TTAA	3 cut(s)	930, 1062, 1199
MspI	CCGG	3 cut(s)	144, 310, 350
MspR9I	CCNGG	3 cut(s)	144, 310, 491
MunI	CAATTG	1 cut(s)	650
MvaI	CCWGG	1 cut(s)	491
MvnI	CGCG	3 cut(s)	84, 200, 1345
NciI	CCSGG	2 cut(s)	144, 310
NdeII	GATC	7 cut(s)	123, 261, 279, 484, 598, 1154, 1364
NlaIII	CATG	5 cut(s)	400, 674, 782, 1105, 1406
NlaIV	GGNNCC	4 cut(s)	142, 151, 572, 714
NmeAIII	GCCGAG	1 cut(s)	1021
NspI	RCATGY	1 cut(s)	674
NspV	TTCGAA	1 cut(s)	403
PaeI	GCATGC	1 cut(s)	674
PaeR7I	CTCGAG	1 cut(s)	65
PagI	TCATGA	1 cut(s)	1101
PaqCI	CACCTGC	1 cut(s)	1171
PceI	AGGCCT	1 cut(s)	701
PcsI	WCGNNNNNNNCGW	2 cut(s)	162, 312
PkrI	GCNGC	7 cut(s)	63, 110, 113, 137, 149, 666, 669
Ple19I	CGATCG	1 cut(s)	126
PleI	GAGTC	3 cut(s)	80, 920, 1208
PpsI	GAGTC	3 cut(s)	80, 920, 1208
PsiI	TTATAA	1 cut(s)	480
Psp6I	CCWGG	1 cut(s)	489
PspGI	CCWGG	1 cut(s)	489
PspN4I	GGNNCC	4 cut(s)	142, 151, 572, 714
PspPI	GGNCC	2 cut(s)	140, 571
PspXI	VCTCGAGB	1 cut(s)	65
PstI	CTGCAG	2 cut(s)	666, 822
PvuI	CGATCG	1 cut(s)	126
RsaI	GTAC	1 cut(s)	539
RsaNI	GTAC	1 cut(s)	538
SalI	GTCGAC	1 cut(s)	164
SaqAI	TTAA	3 cut(s)	930, 1062, 1199
SatI	GCNGC	7 cut(s)	62, 109, 112, 136, 148, 665, 668
Sau3AI	GATC	7 cut(s)	123, 261, 279, 484, 598, 1154, 1364
Sau96I	GGNCC	2 cut(s)	140, 571
SchI	GAGTC	3 cut(s)	80, 921, 1208
ScrFI	CCNGG	3 cut(s)	144, 310, 491
SduI	GDGCHC	2 cut(s)	72, 1294
SfaNI	GCATC	1 cut(s)	1288
SfcI	CTRYAG	2 cut(s)	662, 818
Sfr274I	CTCGAG	1 cut(s)	65
SfuI	TTCGAA	1 cut(s)	403
SinI	GGWCC	1 cut(s)	140
SlaI	CTCGAG	1 cut(s)	65
SmlI	CTYRAG	2 cut(s)	65, 703
SmoI	CTYRAG	2 cut(s)	65, 703
SphI	GCATGC	1 cut(s)	674
Sse9I	AATT	8 cut(s)	214, 254, 296, 418, 499, 650, 962, 1034
SseBI	AGGCCT	1 cut(s)	701
SspMI	CTAG	2 cut(s)	1005, 1382
StuI	AGGCCT	1 cut(s)	701
StyD4I	CCNGG	3 cut(s)	142, 308, 489
TaaI	ACNGT	1 cut(s)	415
TaiI	ACGT	2 cut(s)	165, 545
TasI	AATT	8 cut(s)	214, 254, 296, 418, 499, 650, 962, 1034
TatI	WGTACW	1 cut(s)	537
TauI	GCSGC	4 cut(s)	64, 114, 138, 150
Tru1I	TTAA	3 cut(s)	930, 1062, 1199
Tru9I	TTAA	3 cut(s)	930, 1062, 1199
TscAI	CASTG	3 cut(s)	434, 461, 1260
TseI	GCWGC	3 cut(s)	108, 664, 667
TspDTI	ATGAA	4 cut(s)	47, 597, 968, 1368
TspGWI	ACGGA	2 cut(s)	226, 692
TspRI	CASTG	3 cut(s)	434, 461, 1260
VneI	GTGCAC	1 cut(s)	1290
VpaK11BI	GGWCC	1 cut(s)	140
XapI	RAATTY	4 cut(s)	254, 296, 418, 499
XbaI	TCTAGA	1 cut(s)	1381
XceI	RCATGY	1 cut(s)	674
XhoI	CTCGAG	1 cut(s)	65
XmiI	GTMKAC	1 cut(s)	165
XspI	CTAG	2 cut(s)	1005, 1382

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.