Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0007107

Physical Location & Seq

Genomic Coordinates Forward (+)

52047365 .. 52057478

Gene Structure 10114 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1419200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGAGAGGCACAAGCCGTGGGCGAGTCAGGGAGTCGTTCAACCCACGCCCACCACCGGCAACGCCGCTGGACCACTTCCGCCACCAACGGGACTCCGATGCCAGCTTCGCAAGCAGCCGCCCTTCCTCGGTGGGCATGGGTCCCACCACCACCGCCCTCGACCTGTACAAAGACCGCTCCTTCCAGCAGTCCACCGTCTCCGCCATCAATTCCTACCTGTCCTCCCACTCCCTCCAATTCTCCCTCAAATTCCCGATCCCCTCCGCCAGGGAAATCACCGAAACCCTAAAATTCCTCCTCGCCCGCCTCGACTACCCTTCCCCCAAGCTGGAGGACGACCTCCCCCTCCTCCTCAAATTCCTGAAATGCCCCTTCAAGCCCAACAAGGCCATGCTCCGAAACCCCACCGTCAACGCCCACCAGTGGCCCACTCTGCTCGCTGTCATCCACTGGGTCTTCCAGATTGTGCTCTACACCGACCATCTCGCCACCGATTCCCGGGCCTTCGTCGAGAACAATGCCATGTCTGAGTACGCCCTGGAGAGTTACTTGCATTATATACACGGGGACGATGACGCCGTGGAGGCCTTGGACCGAGATTTCTTGGACAAGTTGGATAGGGAGAAAGAGAATGCGGAGGAGAATGTTAGGGTATTGGAGGCAACCGCCACGGAGCTGCAGGGAAGGGTGGAGATGATGCGGTCGGAGCCCTCCAGGAGGGAGGCGCTGGAGAAGGAGAGGGGTTTGTTGGAGGGGGATGTGGTCAAGTTCAATGAAATCATAGGGAATCTGGAGAAGAGTATCGCAAATTTGGAGGCGGTGATGGAGGGGAGAGAGAAGGAATTGGAGGCCAAAGTGGTGGATAATAAGAGGATTTGCCAAGAGAATGCGGAGTTGAAGAATAGGGTGGAATTGCAGACCTTCAATGCCAGGGATGTGGATAGAATGAAGAGGGAATTGCAGGCAGTAGAGAGGGATATTGGGGAAGCCGAGCTCGAAAGGAATGCGTGGGAGGAGAAGGCTTGGGAACTTGATACCATGCTTAACCATAAGTTTAAGGACCTTGAGGCTGTGGCCATGGACTGCAACCAGGCTATGAGGAGGTTGAAACTTGGTAATGGATTTCAGTATGGATTGAATGCTAAGGGATCAACACCAGCTGAGGTTATGGGGATTGACTACAAATCAACATTAAAGCCTTCACTTGACTCCTACTTAGACGATATAAAGAAAAGCTCTGTGGATAAACTGGAAGAGTTGATATCCCTTCAGAAACAGTCAAGTGAACTTTCTGCTCAGATTGAGGGCAAACGCAATTATATAGCGACGCTTCAATCTCATATCGATGAAGTTGAAGCTCAACTGAACTTGTTGAAGAAAGAGACACAGGAATACACTTCTAGATGTGCAGCCGAAGCTAGAAACTTGATGGAAGATGTTCAGAGGGAGACTCATAACTTGAATACTGTGGAAAGAGAAGCAGACGAGATTCTGAAGACCTCCAAACTGAAACTGCAGGATGCAATCAAACAAACTGAAGAAGAAACCCAAAAGTGCGCTTATGAACTCATGGCAGTAGCTGACTCAGTCTCGAAGTACAAAGAATATGTGCAGTCTAAGATTTTTGAAATGAAGAGAGATGTCTCGGAAACAGCTGTTGCTGTATCAGACACTCACAAAAGTTGCTTGGAATCACAATTTGGTTTTCTGTACGGTGCAAACCAGCAATCAGAAACAGCACTCCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0003674 GO:0005198 GO:0005200 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006996 GO:0007010 GO:0007049 GO:0007059 GO:0007080 GO:0008150 GO:0008608 GO:0009987 GO:0016043 GO:0022402 GO:0031262 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070013 GO:0071840 GO:0098687 GO:0098813 GO:0140014 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ndc80_HEC

Protein Analysis

583

Amino Acids

66.44

Weight (kDa)

5.25

Isoelectric Point (pI)

43.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ndc80_HEC	PF03801	56 - 161	6e-15	HEC/Ndc80p family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007107)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54630
fragaria_vesca	FvH4_5g35831
malus_domestica	MD08G1226900.v1.1 MD15G1419200.v1.1
prunus_persica	Prupe.1G564000_v2.0.a1
pyrus_communis	pycom08g19790 pycom15g37210
rosa_chinensis	RchiOBHm_Chr5g0046031
rosa_laevigata	RLG00000034393
rosa_multiflora	Rmu_co8491665.1_g000002 Rmu_sc0001035.1_g000029 Rmu_sc0001212.1_g000011
rosa_roxburghii	Rroxscaffold_1G00035270 Rroxscaffold_1G00035320 Rroxscaffold_3G00224020
rosa_rugosa	Rorug05G0226200 Rorug07G0304000
rosa_samantha	Rh5AG306800 Rh5BG315500 Rh5CG341700 Rh5CG342000 Rh5DG325500
rosa_wichuraiana	Rw0G011960 Rw5G028710 Rw7G038200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	177
AclWI	GGATC	2 cut(s)	250, 1156
AcoI	YGGCCR	1 cut(s)	1074
AcsI	RAATTY	4 cut(s)	248, 290, 356, 808
AcuI	CTGAAG	3 cut(s)	1253, 1514, 1557
AcyI	GRCGYC	1 cut(s)	576
AfaI	GTAC	4 cut(s)	167, 533, 1598, 1712
AfiI	CCNNNNNNNGG	8 cut(s)	55, 88, 127, 267, 328, 423, 498, 717
AjnI	CCWGG	5 cut(s)	266, 537, 713, 929, 1089
AjuI	GAANNNNNNNTTGG	2 cut(s)	1683, 1715
Alw21I	GWGCWC	2 cut(s)	471, 996
Alw26I	GTCTC	5 cut(s)	202, 1376, 1442, 1594, 1648
AlwI	GGATC	2 cut(s)	250, 1156
AlwNI	CAGNNNCTG	1 cut(s)	1580
Ama87I	CYCGRG	1 cut(s)	498
AoxI	GGCC	6 cut(s)	387, 425, 501, 585, 849, 1074
ApeKI	GCWGC	3 cut(s)	114, 676, 1409
ApoI	RAATTY	4 cut(s)	248, 290, 356, 808
Asp700I	GAANNNNTTC	1 cut(s)	1437
AspLEI	GCGC	2 cut(s)	727, 1559
AspS9I	GGNCC	6 cut(s)	70, 140, 426, 501, 592, 1060
AsuC2I	CCSGG	2 cut(s)	499, 500
AsuHPI	GGTGA	2 cut(s)	268, 832
AvaI	CYCGRG	1 cut(s)	498
AvaII	GGWCC	4 cut(s)	70, 140, 592, 1060
BalI	TGGCCA	1 cut(s)	1076
BanII	GRGCYC	2 cut(s)	711, 996
BbsI	GAAGAC	2 cut(s)	448, 1502
Bbv12I	GWGCWC	2 cut(s)	471, 996
BbvCI	CCTCAGC	1 cut(s)	1161
BbvI	GCAGC	3 cut(s)	126, 663, 1421
BccI	CCATC	4 cut(s)	212, 489, 817, 1423
BceAI	ACGGC	1 cut(s)	563
BcgI	CGANNNNNNTGC	4 cut(s)	500, 534, 986, 1020
BciT130I	CCWGG	5 cut(s)	268, 539, 715, 931, 1091
BcnI	CCSGG	2 cut(s)	499, 500
BcoDI	GTCTC	5 cut(s)	202, 1376, 1442, 1594, 1648
BfaI	CTAG	2 cut(s)	1401, 1419
BfmI	CTRYAG	2 cut(s)	677, 1514
BfoI	RGCGCY	1 cut(s)	728
BglI	GCCNNNNNGGC	1 cut(s)	584
BisI	GCNGC	5 cut(s)	65, 115, 118, 677, 1410
BlsI	GCNGC	5 cut(s)	66, 116, 119, 678, 1411
Bme1390I	CCNGG	7 cut(s)	268, 499, 500, 539, 715, 931, 1091
Bme18I	GGWCC	4 cut(s)	70, 140, 592, 1060
BmeT110I	CYCGRG	1 cut(s)	498
BmgT120I	GGNCC	6 cut(s)	70, 140, 426, 501, 592, 1060
BmiI	GGNNCC	3 cut(s)	141, 142, 708
BmrFI	CCNGG	7 cut(s)	268, 499, 500, 539, 715, 931, 1091
BmrI	ACTGGG	1 cut(s)	460
BmsI	GCATC	3 cut(s)	88, 687, 1510
BmuI	ACTGGG	1 cut(s)	460
BpiI	GAAGAC	2 cut(s)	448, 1502
BplI	GAGNNNNNCTC	2 cut(s)	1435, 1467
BpmI	CTGGAG	5 cut(s)	350, 560, 697, 749, 812
Bpu10I	CCTNAGC	2 cut(s)	1143, 1161
BpuEI	CTTGAG	1 cut(s)	1085
BpuMI	CCSGG	2 cut(s)	499, 500
Bsa29I	ATCGAT	1 cut(s)	1344
BsaHI	GRCGYC	1 cut(s)	576
BsaXI	ACNNNNNCTCC	2 cut(s)	206, 236
Bsc4I	CCNNNNNNNGG	8 cut(s)	55, 88, 127, 267, 328, 423, 498, 717
Bse118I	RCCGGY	1 cut(s)	55
Bse1I	ACTGG	3 cut(s)	421, 455, 1254
BseBI	CCWGG	5 cut(s)	268, 539, 715, 931, 1091
BseCI	ATCGAT	1 cut(s)	1344
BseGI	GGATG	4 cut(s)	444, 763, 940, 1525
BseLI	CCNNNNNNNGG	8 cut(s)	55, 88, 127, 267, 328, 423, 498, 717
BseMII	CTCAG	4 cut(s)	519, 1152, 1310, 1599
BseNI	ACTGG	3 cut(s)	421, 455, 1254
BseRI	GAGGAG	6 cut(s)	287, 338, 341, 653, 1028, 1114
BseXI	GCAGC	3 cut(s)	126, 663, 1421
BsgI	GTGCAG	2 cut(s)	1428, 1631
Bsh1285I	CGRYCG	1 cut(s)	704
BshFI	GGCC	6 cut(s)	389, 427, 503, 587, 851, 1076
BshVI	ATCGAT	1 cut(s)	1344
BsiEI	CGRYCG	1 cut(s)	704
BsiHKAI	GWGCWC	2 cut(s)	471, 996
BsiHKCI	CYCGRG	1 cut(s)	498
BsiSI	CCGG	2 cut(s)	56, 499
BslFI	GGGAC	3 cut(s)	104, 126, 581
BslI	CCNNNNNNNGG	8 cut(s)	55, 88, 127, 267, 328, 423, 498, 717
BsmAI	GTCTC	5 cut(s)	202, 1376, 1442, 1594, 1648
BsmBI	CGTCTC	1 cut(s)	202
BsmFI	GGGAC	3 cut(s)	104, 126, 581
BsmI	GAATGC	4 cut(s)	637, 892, 1009, 1144
BsnI	GGCC	6 cut(s)	389, 427, 503, 587, 851, 1076
BsoBI	CYCGRG	1 cut(s)	498
Bsp1286I	GDGCHC	3 cut(s)	471, 711, 996
Bsp1407I	TGTACA	1 cut(s)	165
Bsp143I	GATC	2 cut(s)	255, 1148
Bsp19I	CCATGG	1 cut(s)	1077
BspANI	GGCC	6 cut(s)	389, 427, 503, 587, 851, 1076
BspCNI	CTCAG	4 cut(s)	520, 1153, 1309, 1598
BspDI	ATCGAT	1 cut(s)	1344
BspLI	GGNNCC	3 cut(s)	141, 142, 708
BspMAI	CTGCAG	2 cut(s)	681, 1518
BspPI	GGATC	2 cut(s)	250, 1156
BsrBI	CCGCTC	1 cut(s)	177
BsrFI	RCCGGY	1 cut(s)	55
BsrGI	TGTACA	1 cut(s)	165
BsrI	ACTGG	3 cut(s)	421, 455, 1254
BssAI	RCCGGY	1 cut(s)	55
BssMI	GATC	2 cut(s)	255, 1148
BssNI	GRCGYC	1 cut(s)	576
BssT1I	CCWWGG	2 cut(s)	588, 1077
Bst2UI	CCWGG	5 cut(s)	268, 539, 715, 931, 1091
Bst4CI	ACNGT	5 cut(s)	196, 409, 1278, 1468, 1715
Bst6I	CTCTTC	4 cut(s)	791, 944, 1248, 1628
BstACI	GRCGYC	1 cut(s)	576
BstAUI	TGTACA	1 cut(s)	165
BstC8I	GCNNGC	5 cut(s)	103, 112, 304, 438, 963
BstDEI	CTNAG	7 cut(s)	528, 1143, 1161, 1216, 1296, 1585, 1617
BstDSI	CCRYGG	4 cut(s)	16, 579, 669, 1077
BstENI	CCTNNNNNAGG	2 cut(s)	265, 715
BstF5I	GGATG	4 cut(s)	444, 763, 940, 1525
BstH2I	RGCGCY	1 cut(s)	728
BstHHI	GCGC	2 cut(s)	727, 1559
BstKTI	GATC	2 cut(s)	258, 1151
BstMAI	GTCTC	5 cut(s)	202, 1376, 1442, 1594, 1648
BstMBI	GATC	2 cut(s)	255, 1148
BstMCI	CGRYCG	1 cut(s)	704
BstMWI	GCNNNNNNNGC	6 cut(s)	107, 111, 433, 584, 706, 1415
BstNI	CCWGG	5 cut(s)	268, 539, 715, 931, 1091
BstSCI	CCNGG	7 cut(s)	266, 497, 498, 537, 713, 929, 1089
BstSFI	CTRYAG	2 cut(s)	677, 1514
BstV1I	GCAGC	3 cut(s)	126, 663, 1421
BstV2I	GAAGAC	2 cut(s)	448, 1502
BstXI	CCANNNNNNTGG	2 cut(s)	859, 937
Bsu15I	ATCGAT	1 cut(s)	1344
BsuRI	GGCC	6 cut(s)	389, 427, 503, 587, 851, 1076
BsuTUI	ATCGAT	1 cut(s)	1344
BtgI	CCRYGG	4 cut(s)	16, 579, 669, 1077
BtsCI	GGATG	4 cut(s)	444, 763, 940, 1525
BtsIMutI	CAGTG	2 cut(s)	428, 448
Cac8I	GCNNGC	5 cut(s)	103, 112, 304, 438, 963
CaiI	CAGNNNCTG	1 cut(s)	1580
CfoI	GCGC	2 cut(s)	727, 1559
Cfr10I	RCCGGY	1 cut(s)	55
Cfr13I	GGNCC	6 cut(s)	70, 140, 426, 501, 592, 1060
Cfr9I	CCCGGG	1 cut(s)	498
ClaI	ATCGAT	1 cut(s)	1344
CseI	GACGC	2 cut(s)	584, 1336
Csp6I	GTAC	4 cut(s)	166, 532, 1597, 1711
CviAII	CATG	6 cut(s)	136, 391, 523, 1039, 1078, 1570
CviQI	GTAC	4 cut(s)	166, 532, 1597, 1711
DdeI	CTNAG	7 cut(s)	528, 1143, 1161, 1216, 1296, 1585, 1617
DpnI	GATC	2 cut(s)	257, 1150
DpnII	GATC	2 cut(s)	255, 1148
EaeI	YGGCCR	1 cut(s)	1074
Eam1104I	CTCTTC	4 cut(s)	791, 944, 1248, 1628
EarI	CTCTTC	4 cut(s)	791, 944, 1248, 1628
EciI	GGCGGA	3 cut(s)	68, 190, 253
Ecl136II	GAGCTC	1 cut(s)	994
Eco130I	CCWWGG	2 cut(s)	588, 1077
Eco147I	AGGCCT	1 cut(s)	587
Eco24I	GRGCYC	2 cut(s)	711, 996
Eco32I	GATATC	1 cut(s)	1263
Eco47I	GGWCC	4 cut(s)	70, 140, 592, 1060
Eco53kI	GAGCTC	1 cut(s)	994
Eco57I	CTGAAG	3 cut(s)	1253, 1514, 1557
Eco88I	CYCGRG	1 cut(s)	498
EcoICRI	GAGCTC	1 cut(s)	994
EcoNI	CCTNNNNNAGG	2 cut(s)	265, 715
EcoO109I	RGGNCCY	2 cut(s)	140, 1060
EcoRII	CCWGG	5 cut(s)	266, 537, 713, 929, 1089
EcoRV	GATATC	1 cut(s)	1263
EcoT14I	CCWWGG	2 cut(s)	588, 1077
EcoT38I	GRGCYC	2 cut(s)	711, 996
ErhI	CCWWGG	2 cut(s)	588, 1077
Esp3I	CGTCTC	1 cut(s)	202
FaeI	CATG	6 cut(s)	139, 394, 526, 1042, 1081, 1573
FaqI	GGGAC	3 cut(s)	104, 126, 581
FatI	CATG	6 cut(s)	135, 390, 522, 1038, 1077, 1569
FauI	CCCGC	1 cut(s)	311
Fnu4HI	GCNGC	5 cut(s)	65, 115, 118, 677, 1410
FokI	GGATG	4 cut(s)	431, 770, 947, 1532
FriOI	GRGCYC	2 cut(s)	711, 996
Fsp4HI	GCNGC	5 cut(s)	65, 115, 118, 677, 1410
FspBI	CTAG	2 cut(s)	1401, 1419
GlaI	GCGC	2 cut(s)	726, 1558
GluI	GCNGC	5 cut(s)	65, 115, 118, 677, 1410
GsuI	CTGGAG	5 cut(s)	350, 560, 697, 749, 812
HaeII	RGCGCY	1 cut(s)	728
HaeIII	GGCC	6 cut(s)	389, 427, 503, 587, 851, 1076
HapII	CCGG	2 cut(s)	56, 499
HgaI	GACGC	2 cut(s)	584, 1336
HhaI	GCGC	2 cut(s)	727, 1559
Hin1I	GRCGYC	1 cut(s)	576
Hin1II	CATG	6 cut(s)	139, 394, 526, 1042, 1081, 1573
Hin6I	GCGC	2 cut(s)	725, 1557
HinP1I	GCGC	2 cut(s)	725, 1557
HincII	GTYRAC	1 cut(s)	412
HindII	GTYRAC	1 cut(s)	412
HpaII	CCGG	2 cut(s)	56, 499
HphI	GGTGA	2 cut(s)	268, 832
Hpy166II	GTNNAC	3 cut(s)	192, 412, 1286
Hpy188III	TCNNGA	7 cut(s)	253, 361, 460, 511, 791, 1401, 1591
Hpy8I	GTNNAC	3 cut(s)	192, 412, 1286
Hpy99I	CGWCG	2 cut(s)	512, 1330
HpyCH4III	ACNGT	5 cut(s)	196, 409, 1278, 1468, 1715
HpyF10VI	GCNNNNNNNGC	6 cut(s)	107, 111, 433, 584, 706, 1415
HpyF3I	CTNAG	7 cut(s)	528, 1143, 1161, 1216, 1296, 1585, 1617
Hsp92I	GRCGYC	1 cut(s)	576
Hsp92II	CATG	6 cut(s)	139, 394, 526, 1042, 1081, 1573
HspAI	GCGC	2 cut(s)	725, 1557
KflI	GGGWCCC	1 cut(s)	140
Kzo9I	GATC	2 cut(s)	255, 1148
LmnI	GCTCC	4 cut(s)	182, 399, 673, 706
Lsp1109I	GCAGC	3 cut(s)	126, 663, 1421
LweI	GCATC	3 cut(s)	88, 687, 1510
MaeI	CTAG	2 cut(s)	1401, 1419
MaeIII	GTNAC	1 cut(s)	545
MalI	GATC	2 cut(s)	257, 1150
MbiI	CCGCTC	1 cut(s)	177
MboI	GATC	2 cut(s)	255, 1148
MhlI	GDGCHC	3 cut(s)	471, 711, 996
MlsI	TGGCCA	1 cut(s)	1076
MluNI	TGGCCA	1 cut(s)	1076
MlyI	GAGTC	6 cut(s)	33, 41, 86, 1202, 1444, 1577
MmeI	TCCRAC	3 cut(s)	594, 684, 729
Mox20I	TGGCCA	1 cut(s)	1076
MroXI	GAANNNNTTC	1 cut(s)	1437
MscI	TGGCCA	1 cut(s)	1076
MseI	TTAA	3 cut(s)	1044, 1056, 1193
MslI	CAYNNNNRTG	1 cut(s)	1344
Msp20I	TGGCCA	1 cut(s)	1076
MspA1I	CMGCKG	3 cut(s)	67, 1160, 1655
MspI	CCGG	2 cut(s)	56, 499
MspR9I	CCNGG	7 cut(s)	268, 499, 500, 539, 715, 931, 1091
Mva1269I	GAATGC	4 cut(s)	637, 892, 1009, 1144
MvaI	CCWGG	5 cut(s)	268, 539, 715, 931, 1091
MwoI	GCNNNNNNNGC	6 cut(s)	107, 111, 433, 584, 706, 1415
NciI	CCSGG	2 cut(s)	499, 500
NcoI	CCATGG	1 cut(s)	1077
NdeII	GATC	2 cut(s)	255, 1148
NlaIII	CATG	6 cut(s)	139, 394, 526, 1042, 1081, 1573
NlaIV	GGNNCC	3 cut(s)	141, 142, 708
NmeAIII	GCCGAG	1 cut(s)	1015
PceI	AGGCCT	1 cut(s)	587
PcsI	WCGNNNNNNNCGW	2 cut(s)	306, 576
PctI	GAATGC	4 cut(s)	637, 892, 1009, 1144
PdmI	GAANNNNTTC	1 cut(s)	1437
PfeI	GAWTC	4 cut(s)	494, 787, 1489, 1691
PflFI	GACNNNGTC	1 cut(s)	1586
PfoI	TCCNGGA	1 cut(s)	713
PkrI	GCNGC	5 cut(s)	66, 116, 119, 678, 1411
PleI	GAGTC	6 cut(s)	32, 40, 86, 1202, 1444, 1577
PpsI	GAGTC	6 cut(s)	32, 40, 86, 1202, 1444, 1577
PpuMI	RGGWCCY	2 cut(s)	140, 1060
Psp124BI	GAGCTC	1 cut(s)	996
Psp5II	RGGWCCY	2 cut(s)	140, 1060
Psp6I	CCWGG	5 cut(s)	266, 537, 713, 929, 1089
PspGI	CCWGG	5 cut(s)	266, 537, 713, 929, 1089
PspN4I	GGNNCC	3 cut(s)	141, 142, 708
PspPI	GGNCC	6 cut(s)	70, 140, 426, 501, 592, 1060
PspPPI	RGGWCCY	2 cut(s)	140, 1060
PstI	CTGCAG	2 cut(s)	681, 1518
PstNI	CAGNNNCTG	1 cut(s)	1580
PsyI	GACNNNGTC	1 cut(s)	1586
PvuII	CAGCTG	2 cut(s)	1160, 1655
RsaI	GTAC	4 cut(s)	167, 533, 1598, 1712
RsaNI	GTAC	4 cut(s)	166, 532, 1597, 1711
RseI	CAYNNNNRTG	1 cut(s)	1344
SacI	GAGCTC	1 cut(s)	996
SaqAI	TTAA	3 cut(s)	1044, 1056, 1193
SatI	GCNGC	5 cut(s)	65, 115, 118, 677, 1410
Sau3AI	GATC	2 cut(s)	255, 1148
Sau96I	GGNCC	6 cut(s)	70, 140, 426, 501, 592, 1060
SchI	GAGTC	6 cut(s)	33, 41, 86, 1202, 1444, 1577
ScrFI	CCNGG	7 cut(s)	268, 499, 500, 539, 715, 931, 1091
SduI	GDGCHC	3 cut(s)	471, 711, 996
SfaNI	GCATC	3 cut(s)	88, 687, 1510
SfcI	CTRYAG	2 cut(s)	677, 1514
SinI	GGWCC	4 cut(s)	70, 140, 592, 1060
SmaI	CCCGGG	1 cut(s)	500
SmiMI	CAYNNNNRTG	1 cut(s)	1344
SmlI	CTYRAG	1 cut(s)	1064
SmoI	CTYRAG	1 cut(s)	1064
SseBI	AGGCCT	1 cut(s)	587
SspMI	CTAG	2 cut(s)	1401, 1419
SstI	GAGCTC	1 cut(s)	996
StuI	AGGCCT	1 cut(s)	587
StyD4I	CCNGG	7 cut(s)	266, 497, 498, 537, 713, 929, 1089
StyI	CCWWGG	2 cut(s)	588, 1077
TaaI	ACNGT	5 cut(s)	196, 409, 1278, 1468, 1715
TaqI	TCGA	6 cut(s)	159, 309, 510, 996, 1344, 1592
TaqII	GACCGA	1 cut(s)	609
TatI	WGTACW	2 cut(s)	165, 1596
TauI	GCSGC	2 cut(s)	67, 120
TfiI	GAWTC	4 cut(s)	494, 787, 1489, 1691
Tru1I	TTAA	3 cut(s)	1044, 1056, 1193
Tru9I	TTAA	3 cut(s)	1044, 1056, 1193
TscAI	CASTG	2 cut(s)	428, 455
TseI	GCWGC	3 cut(s)	114, 676, 1409
TspDTI	ATGAA	5 cut(s)	789, 962, 1362, 1578, 1646
TspGWI	ACGGA	1 cut(s)	686
TspMI	CCCGGG	1 cut(s)	498
TspRI	CASTG	2 cut(s)	428, 455
Tth111I	GACNNNGTC	1 cut(s)	1586
VpaK11BI	GGWCC	4 cut(s)	70, 140, 592, 1060
XagI	CCTNNNNNAGG	2 cut(s)	265, 715
XapI	RAATTY	4 cut(s)	248, 290, 356, 808
XbaI	TCTAGA	1 cut(s)	1400
XmaI	CCCGGG	1 cut(s)	498
XmnI	GAANNNNTTC	1 cut(s)	1437
XspI	CTAG	2 cut(s)	1401, 1419

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.