Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0007107

Physical Location & Seq

Genomic Coordinates Reverse (-)

30395933 .. 30399710

Gene Structure 3778 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0304000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 996 bp

ATGGCTTCTTCGTCATCGGAGGCGGTGTGCGTGACCGGAGGCAACGGCTTCATCGGCTCGTGGCTCGTCAAGACCCTACTGGAGCGCGGCTACACTCGCGTCCACGTCTCCGTCTACCCCGGCTCCGACGCCTCCCACCTCTTCTCCCTCCCCGGCGCCTCCTCCGCCACCCTCGCCGTCTTCGAGGCCGACATCCTCGACGCCGGCGCCGTCGCCAGGGCCGTCGAGAACTGCAAGGGCGTGTTCCACGTGGCGTCGCCGTGCACCCTCGAGGACCCCAAAGACCCCCAGGCGGAGCTGGTCTTGCCCGCCGTGCAGGGCACCCTCAATGTGCTCCAGGCCGCGGCGAGGTCCGGCGTGAGGCGCGTGGTGCTCACGTCCTCCATCTCGGCCATGGTCCCCAACCCCGGTTGGCCCTCCCACAAGGTCTTCGACGAGACGTCCTGGACCGACCTCGATTACTGCAAATCCCGCCAGAAATGGTATCCCGTGTCAAAGACACTAGCAGAGAAAGCAGCATGGGATTTCGCAGAGAAGAATGGATTGGATGTGGTAGCAATCCATCCAGCCACATGTCTTGGACCTCTTCTGCAGCCTGGTTTGAATGCAAGCTGTGCCGTTCTGCTCAACTTGCTGCAGGGATCCAAAGACACACAAGAGTATCACTGGTTGGGGGCTGTGCATGTCAAAGATGTCGCCAAGGCACAAGTTTTGCTGTTTGAGGCTCCTGCGGCTTCTGGAAGGTACCTTTGTACCAATGGTATCTACCAATTCAGTGACTTTGCTGATAGAATCTCCAAGCTCTTCCCTCACTTTCCAGTTCACAGGTTTAGCGGGGAAACCCAACCAGGCCTAAAGGATTGCAAGGATGCTGCAAAGAGATTAATCGACCTGGGTCTGGTTTTCGTACCAGTTGAAGATGCTGTTCGGGAAACAGTGGAGAGCCTCAAAGCTAGAGGCTTTTTGAAGCAGGAAGAGACGTCGCAATCTAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0003674 GO:0005198 GO:0005200 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006996 GO:0007010 GO:0007049 GO:0007059 GO:0007080 GO:0008150 GO:0008608 GO:0009987 GO:0016043 GO:0022402 GO:0031262 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070013 GO:0071840 GO:0098687 GO:0098813 GO:0140014 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ndc80_HEC

Protein Analysis

331

Amino Acids

35.66

Weight (kDa)

6.15

Isoelectric Point (pI)

37.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Epimerase	PF01370	9 - 246	1.1e-26	NAD dependent epimerase/dehydratase family
Polysacc_synt_2	PF02719	9 - 136	2e-07	Polysaccharide biosynthesis protein
KR	PF08659	10 - 137	2.2e-08	KR domain
3Beta_HSD	PF01073	11 - 238	1.3e-21	3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd	PF16363	11 - 263	1.7e-13	GDP-mannose 4,6 dehydratase
NAD_binding_10	PF13460	13 - 143	4.4e-12	NAD(P)H-binding
NAD_binding_4	PF07993	67 - 194	7.8e-07	Male sterility protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007107)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54630
fragaria_vesca	FvH4_5g35831
malus_domestica	MD08G1226900.v1.1 MD15G1419200.v1.1
prunus_persica	Prupe.1G564000_v2.0.a1
pyrus_communis	pycom08g19790 pycom15g37210
rosa_chinensis	RchiOBHm_Chr5g0046031
rosa_laevigata	RLG00000034393
rosa_multiflora	Rmu_co8491665.1_g000002 Rmu_sc0001035.1_g000029 Rmu_sc0001212.1_g000011
rosa_roxburghii	Rroxscaffold_1G00035270 Rroxscaffold_1G00035320 Rroxscaffold_3G00224020
rosa_rugosa	Rorug05G0226200 Rorug07G0304000
rosa_samantha	Rh5AG306800 Rh5BG315500 Rh5CG341700 Rh5CG342000 Rh5DG325500
rosa_wichuraiana	Rw0G011960 Rw5G028710 Rw7G038200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	443, 983
AbsI	CCTCGAGG	1 cut(s)	269
Acc65I	GGTACC	1 cut(s)	744
AccB1I	GGYRCC	4 cut(s)	155, 206, 320, 744
AccI	GTMKAC	1 cut(s)	114
AccII	CGCG	4 cut(s)	87, 99, 344, 366
AclWI	GGATC	2 cut(s)	636, 649
AcoI	YGGCCR	1 cut(s)	390
AcvI	CACGTG	1 cut(s)	250
AcyI	GRCGYC	7 cut(s)	129, 156, 201, 207, 254, 440, 980
AfaI	GTAC	3 cut(s)	746, 754, 909
AfiI	CCNNNNNNNGG	7 cut(s)	216, 292, 343, 348, 360, 407, 898
AflIII	ACRYGT	1 cut(s)	572
AgsI	TTSAA	3 cut(s)	604, 917, 967
AhdI	GACNNNNNGTC	1 cut(s)	439
AjiI	CACGTC	2 cut(s)	106, 378
AjnI	CCWGG	7 cut(s)	215, 288, 336, 443, 595, 847, 891
AjuI	GAANNNNNNNTTGG	2 cut(s)	527, 559
AluBI	AGCT	5 cut(s)	298, 612, 802, 953, 993
AluI	AGCT	5 cut(s)	298, 612, 802, 953, 993
Alw21I	GWGCWC	3 cut(s)	266, 336, 375
Alw26I	GTCTC	3 cut(s)	112, 431, 971
Alw44I	GTGCAC	1 cut(s)	262
AlwI	GGATC	2 cut(s)	636, 649
Ama87I	CYCGRG	1 cut(s)	269
AoxI	GGCC	6 cut(s)	186, 219, 339, 390, 413, 850
ApaLI	GTGCAC	1 cut(s)	262
ApeKI	GCWGC	4 cut(s)	515, 592, 634, 872
AseI	ATTAAT	1 cut(s)	884
Asp718I	GGTACC	1 cut(s)	744
AspLEI	GCGC	4 cut(s)	87, 158, 209, 366
AspS9I	GGNCC	7 cut(s)	219, 274, 351, 397, 414, 447, 581
AsuC2I	CCSGG	3 cut(s)	120, 153, 408
AvaI	CYCGRG	1 cut(s)	269
AvaII	GGWCC	5 cut(s)	274, 351, 397, 447, 581
BaeGI	GKGCMC	2 cut(s)	266, 323
BaeI	ACNNNNGTAYC	6 cut(s)	644, 677, 736, 736, 769, 769
BamHI	GGATCC	1 cut(s)	641
BanI	GGYRCC	4 cut(s)	155, 206, 320, 744
BauI	CACGAG	1 cut(s)	58
BbrPI	CACGTG	1 cut(s)	250
BbsI	GAAGAC	2 cut(s)	172, 421
Bbv12I	GWGCWC	3 cut(s)	266, 336, 375
BbvI	GCAGC	4 cut(s)	527, 604, 621, 859
BccI	CCATC	2 cut(s)	392, 570
BceAI	ACGGC	7 cut(s)	61, 161, 194, 206, 244, 296, 602
BciT130I	CCWGG	7 cut(s)	217, 290, 338, 445, 597, 849, 893
BciVI	GTATCC	1 cut(s)	495
BcnI	CCSGG	3 cut(s)	120, 153, 408
BcoDI	GTCTC	3 cut(s)	112, 431, 971
BfaI	CTAG	4 cut(s)	503, 954, 990, 994
BfmI	CTRYAG	2 cut(s)	590, 635
BfoI	RGCGCY	2 cut(s)	159, 210
BfuI	GTATCC	1 cut(s)	495
BisI	GCNGC	8 cut(s)	88, 342, 345, 516, 593, 635, 732, 873
BlsI	GCNGC	8 cut(s)	89, 343, 346, 517, 594, 636, 733, 874
Bme18I	GGWCC	5 cut(s)	274, 351, 397, 447, 581
BmeRI	GACNNNNNGTC	1 cut(s)	439
BmeT110I	CYCGRG	1 cut(s)	269
BmgBI	CACGTC	2 cut(s)	106, 378
BmgT120I	GGNCC	7 cut(s)	219, 274, 351, 397, 414, 447, 581
BmiI	GGNNCC	9 cut(s)	124, 157, 208, 276, 322, 399, 643, 726, 746
BmsI	GCATC	2 cut(s)	859, 910
BoxI	GACNNNNGTC	1 cut(s)	894
BpiI	GAAGAC	2 cut(s)	172, 421
BpmI	CTGGAG	2 cut(s)	101, 320
BpuMI	CCSGG	3 cut(s)	120, 153, 408
BsaAI	YACGTR	1 cut(s)	250
BsaHI	GRCGYC	7 cut(s)	129, 156, 201, 207, 254, 440, 980
BsaJI	CCNNGG	9 cut(s)	118, 151, 216, 288, 342, 393, 406, 699, 892
BsaWI	WCCGGW	1 cut(s)	35
BsaXI	ACNNNNNCTCC	6 cut(s)	11, 41, 107, 128, 137, 158
Bsc4I	CCNNNNNNNGG	7 cut(s)	216, 292, 343, 348, 360, 407, 898
Bse118I	RCCGGY	1 cut(s)	203
Bse1I	ACTGG	4 cut(s)	84, 671, 818, 911
BseBI	CCWGG	7 cut(s)	217, 290, 338, 445, 597, 849, 893
BseDI	CCNNGG	9 cut(s)	118, 151, 216, 288, 342, 393, 406, 699, 892
BseGI	GGATG	4 cut(s)	192, 553, 562, 874
BseLI	CCNNNNNNNGG	7 cut(s)	216, 292, 343, 348, 360, 407, 898
BseNI	ACTGG	4 cut(s)	84, 671, 818, 911
BseRI	GAGGAG	1 cut(s)	151
BseSI	GKGCMC	2 cut(s)	266, 323
BseXI	GCAGC	4 cut(s)	527, 604, 621, 859
BsgI	GTGCAG	1 cut(s)	335
Bsh1236I	CGCG	4 cut(s)	87, 99, 344, 366
BshFI	GGCC	6 cut(s)	188, 221, 341, 392, 415, 852
BshNI	GGYRCC	4 cut(s)	155, 206, 320, 744
BsiHKAI	GWGCWC	3 cut(s)	266, 336, 375
BsiHKCI	CYCGRG	1 cut(s)	269
BsiSI	CCGG	6 cut(s)	36, 120, 153, 204, 354, 408
BslFI	GGGAC	1 cut(s)	383
BslI	CCNNNNNNNGG	7 cut(s)	216, 292, 343, 348, 360, 407, 898
BsmAI	GTCTC	3 cut(s)	112, 431, 971
BsmBI	CGTCTC	3 cut(s)	112, 431, 971
BsmFI	GGGAC	1 cut(s)	383
BsmI	GAATGC	1 cut(s)	610
BsnI	GGCC	6 cut(s)	188, 221, 341, 392, 415, 852
BsoBI	CYCGRG	1 cut(s)	269
Bsp1286I	GDGCHC	4 cut(s)	266, 323, 336, 375
Bsp143I	GATC	1 cut(s)	641
Bsp19I	CCATGG	1 cut(s)	393
BspANI	GGCC	6 cut(s)	188, 221, 341, 392, 415, 852
BspFNI	CGCG	4 cut(s)	87, 99, 344, 366
BspLI	GGNNCC	9 cut(s)	124, 157, 208, 276, 322, 399, 643, 726, 746
BspMAI	CTGCAG	2 cut(s)	594, 639
BspPI	GGATC	2 cut(s)	636, 649
BspQI	GCTCTTC	1 cut(s)	809
BspT107I	GGYRCC	4 cut(s)	155, 206, 320, 744
BsrFI	RCCGGY	1 cut(s)	203
BsrI	ACTGG	4 cut(s)	84, 671, 818, 911
BssAI	RCCGGY	1 cut(s)	203
BssECI	CCNNGG	9 cut(s)	118, 151, 216, 288, 342, 393, 406, 699, 892
BssMI	GATC	1 cut(s)	641
BssNI	GRCGYC	7 cut(s)	129, 156, 201, 207, 254, 440, 980
BssSI	CACGAG	1 cut(s)	58
BssT1I	CCWWGG	2 cut(s)	393, 699
Bst2BI	CACGAG	1 cut(s)	58
Bst2UI	CCWGG	7 cut(s)	217, 290, 338, 445, 597, 849, 893
Bst4CI	ACNGT	1 cut(s)	937
Bst6I	CTCTTC	4 cut(s)	146, 591, 809, 969
BstACI	GRCGYC	7 cut(s)	129, 156, 201, 207, 254, 440, 980
BstAPI	GCANNNNNTGC	1 cut(s)	614
BstBAI	YACGTR	1 cut(s)	250
BstC8I	GCNNGC	3 cut(s)	205, 309, 610
BstDSI	CCRYGG	2 cut(s)	342, 393
BstF5I	GGATG	4 cut(s)	192, 553, 562, 874
BstFNI	CGCG	4 cut(s)	87, 99, 344, 366
BstH2I	RGCGCY	2 cut(s)	159, 210
BstHHI	GCGC	4 cut(s)	87, 158, 209, 366
BstKTI	GATC	1 cut(s)	644
BstMAI	GTCTC	3 cut(s)	112, 431, 971
BstMBI	GATC	1 cut(s)	641
BstNI	CCWGG	7 cut(s)	217, 290, 338, 445, 597, 849, 893
BstNSI	RCATGY	2 cut(s)	576, 686
BstPAI	GACNNNNGTC	1 cut(s)	894
BstSFI	CTRYAG	2 cut(s)	590, 635
BstSLI	GKGCMC	2 cut(s)	266, 323
BstUI	CGCG	4 cut(s)	87, 99, 344, 366
BstV1I	GCAGC	4 cut(s)	527, 604, 621, 859
BstV2I	GAAGAC	2 cut(s)	172, 421
BstX2I	RGATCY	1 cut(s)	641
BstYI	RGATCY	1 cut(s)	641
BsuI	GTATCC	1 cut(s)	495
BsuRI	GGCC	6 cut(s)	188, 221, 341, 392, 415, 852
BtgI	CCRYGG	2 cut(s)	342, 393
BtrI	CACGTC	2 cut(s)	106, 378
BtsCI	GGATG	4 cut(s)	192, 553, 562, 874
BtsIMutI	CAGTG	3 cut(s)	664, 781, 942
Cac8I	GCNNGC	3 cut(s)	205, 309, 610
CfoI	GCGC	4 cut(s)	87, 158, 209, 366
Cfr10I	RCCGGY	1 cut(s)	203
Cfr13I	GGNCC	7 cut(s)	219, 274, 351, 397, 414, 447, 581
Cfr42I	CCGCGG	1 cut(s)	345
CseI	GACGC	4 cut(s)	88, 137, 209, 243
Csp6I	GTAC	3 cut(s)	745, 753, 908
CspCI	CAANNNNNGTGG	2 cut(s)	559, 594
CviAII	CATG	4 cut(s)	394, 519, 573, 683
CviQI	GTAC	3 cut(s)	745, 753, 908
DinI	GGCGCC	2 cut(s)	157, 208
DpnI	GATC	1 cut(s)	643
DpnII	GATC	1 cut(s)	641
DriI	GACNNNNNGTC	1 cut(s)	439
EaeI	YGGCCR	1 cut(s)	390
Eam1104I	CTCTTC	4 cut(s)	146, 591, 809, 969
Eam1105I	GACNNNNNGTC	1 cut(s)	439
EarI	CTCTTC	4 cut(s)	146, 591, 809, 969
EciI	GGCGGA	2 cut(s)	154, 308
Eco130I	CCWWGG	2 cut(s)	393, 699
Eco147I	AGGCCT	1 cut(s)	852
Eco47I	GGWCC	5 cut(s)	274, 351, 397, 447, 581
Eco72I	CACGTG	1 cut(s)	250
Eco88I	CYCGRG	1 cut(s)	269
EcoO109I	RGGNCCY	1 cut(s)	274
EcoRII	CCWGG	7 cut(s)	215, 288, 336, 443, 595, 847, 891
EcoT14I	CCWWGG	2 cut(s)	393, 699
EgeI	GGCGCC	2 cut(s)	157, 208
EheI	GGCGCC	2 cut(s)	157, 208
ErhI	CCWWGG	2 cut(s)	393, 699
Esp3I	CGTCTC	3 cut(s)	112, 431, 971
FaeI	CATG	4 cut(s)	397, 522, 576, 686
FaiI	YATR	4 cut(s)	395, 520, 574, 684
FaqI	GGGAC	1 cut(s)	383
FatI	CATG	4 cut(s)	393, 518, 572, 682
FauI	CCCGC	3 cut(s)	316, 479, 827
FblI	GTMKAC	1 cut(s)	114
Fnu4HI	GCNGC	8 cut(s)	88, 342, 345, 516, 593, 635, 732, 873
FokI	GGATG	4 cut(s)	179, 549, 560, 881
Fsp4HI	GCNGC	8 cut(s)	88, 342, 345, 516, 593, 635, 732, 873
FspBI	CTAG	4 cut(s)	503, 954, 990, 994
GlaI	GCGC	4 cut(s)	86, 157, 208, 365
GluI	GCNGC	8 cut(s)	88, 342, 345, 516, 593, 635, 732, 873
GsuI	CTGGAG	2 cut(s)	101, 320
HaeII	RGCGCY	2 cut(s)	159, 210
HaeIII	GGCC	6 cut(s)	188, 221, 341, 392, 415, 852
HapII	CCGG	6 cut(s)	36, 120, 153, 204, 354, 408
HgaI	GACGC	4 cut(s)	88, 137, 209, 243
HhaI	GCGC	4 cut(s)	87, 158, 209, 366
Hin1I	GRCGYC	7 cut(s)	129, 156, 201, 207, 254, 440, 980
Hin1II	CATG	4 cut(s)	397, 522, 576, 686
Hin6I	GCGC	4 cut(s)	85, 156, 207, 364
HinP1I	GCGC	4 cut(s)	85, 156, 207, 364
HinfI	GANTC	1 cut(s)	792
HpaII	CCGG	6 cut(s)	36, 120, 153, 204, 354, 408
Hpy166II	GTNNAC	4 cut(s)	103, 115, 264, 823
Hpy188I	TCNGA	2 cut(s)	19, 127
Hpy188III	TCNNGA	4 cut(s)	70, 226, 738, 929
Hpy8I	GTNNAC	4 cut(s)	103, 115, 264, 823
Hpy99I	CGWCG	7 cut(s)	131, 203, 215, 227, 259, 437, 985
HpyAV	CCTTC	1 cut(s)	735
HpyCH4III	ACNGT	1 cut(s)	937
HpyCH4IV	ACGT	5 cut(s)	105, 249, 377, 440, 980
HpySE526I	ACGT	5 cut(s)	105, 249, 377, 440, 980
Hsp92I	GRCGYC	7 cut(s)	129, 156, 201, 207, 254, 440, 980
Hsp92II	CATG	4 cut(s)	397, 522, 576, 686
HspAI	GCGC	4 cut(s)	85, 156, 207, 364
KasI	GGCGCC	2 cut(s)	155, 206
KpnI	GGTACC	1 cut(s)	748
KroI	GCCGGC	1 cut(s)	203
KroNI	GCCGGC	1 cut(s)	205
KspI	CCGCGG	1 cut(s)	345
Kzo9I	GATC	1 cut(s)	641
LguI	GCTCTTC	1 cut(s)	809
LmnI	GCTCC	5 cut(s)	82, 128, 295, 339, 730
Lsp1109I	GCAGC	4 cut(s)	527, 604, 621, 859
LweI	GCATC	2 cut(s)	859, 910
MaeI	CTAG	4 cut(s)	503, 954, 990, 994
MaeII	ACGT	5 cut(s)	105, 249, 377, 440, 980
MaeIII	GTNAC	2 cut(s)	31, 776
MalI	GATC	1 cut(s)	643
MboI	GATC	1 cut(s)	641
MboII	GAAGA	8 cut(s)	133, 172, 421, 547, 578, 796, 929, 986
MflI	RGATCY	1 cut(s)	641
MhlI	GDGCHC	4 cut(s)	266, 323, 336, 375
MluCI	AATT	1 cut(s)	770
Mly113I	GGCGCC	2 cut(s)	156, 207
MmeI	TCCRAC	1 cut(s)	150
MreI	CGCCGGCG	1 cut(s)	203
MroNI	GCCGGC	1 cut(s)	203
MseI	TTAA	1 cut(s)	884
MspA1I	CMGCKG	1 cut(s)	344
MspI	CCGG	6 cut(s)	36, 120, 153, 204, 354, 408
Mva1269I	GAATGC	1 cut(s)	610
MvaI	CCWGG	7 cut(s)	217, 290, 338, 445, 597, 849, 893
MvnI	CGCG	4 cut(s)	87, 99, 344, 366
NaeI	GCCGGC	1 cut(s)	205
NarI	GGCGCC	2 cut(s)	156, 207
NciI	CCSGG	3 cut(s)	120, 153, 408
NcoI	CCATGG	1 cut(s)	393
NdeII	GATC	1 cut(s)	641
NgoMIV	GCCGGC	1 cut(s)	203
NlaIII	CATG	4 cut(s)	397, 522, 576, 686
NlaIV	GGNNCC	9 cut(s)	124, 157, 208, 276, 322, 399, 643, 726, 746
NmeAIII	GCCGAG	1 cut(s)	368
NmuCI	GTSAC	2 cut(s)	31, 776
NspI	RCATGY	2 cut(s)	576, 686
PaeR7I	CTCGAG	1 cut(s)	269
PceI	AGGCCT	1 cut(s)	852
PciI	ACATGT	1 cut(s)	572
PciSI	GCTCTTC	1 cut(s)	809
PcsI	WCGNNNNNNNCGW	3 cut(s)	180, 207, 219
PctI	GAATGC	1 cut(s)	610
PdiI	GCCGGC	1 cut(s)	205
PfeI	GAWTC	1 cut(s)	792
PfoI	TCCNGGA	1 cut(s)	443
PkrI	GCNGC	8 cut(s)	89, 343, 346, 517, 594, 636, 733, 874
PluTI	GGCGCC	2 cut(s)	159, 210
PmaCI	CACGTG	1 cut(s)	250
PmlI	CACGTG	1 cut(s)	250
Ppu21I	YACGTR	1 cut(s)	250
PpuMI	RGGWCCY	1 cut(s)	274
PscI	ACATGT	1 cut(s)	572
PshAI	GACNNNNGTC	1 cut(s)	894
PshBI	ATTAAT	1 cut(s)	884
Psp5II	RGGWCCY	1 cut(s)	274
Psp6I	CCWGG	7 cut(s)	215, 288, 336, 443, 595, 847, 891
PspCI	CACGTG	1 cut(s)	250
PspGI	CCWGG	7 cut(s)	215, 288, 336, 443, 595, 847, 891
PspN4I	GGNNCC	9 cut(s)	124, 157, 208, 276, 322, 399, 643, 726, 746
PspPI	GGNCC	7 cut(s)	219, 274, 351, 397, 414, 447, 581
PspPPI	RGGWCCY	1 cut(s)	274
PspXI	VCTCGAGB	1 cut(s)	269
PstI	CTGCAG	2 cut(s)	594, 639
PsuI	RGATCY	1 cut(s)	641
RsaI	GTAC	3 cut(s)	746, 754, 909
RsaNI	GTAC	3 cut(s)	745, 753, 908
SacII	CCGCGG	1 cut(s)	345
SapI	GCTCTTC	1 cut(s)	809
SaqAI	TTAA	1 cut(s)	884
SatI	GCNGC	8 cut(s)	88, 342, 345, 516, 593, 635, 732, 873
Sau3AI	GATC	1 cut(s)	641
Sau96I	GGNCC	7 cut(s)	219, 274, 351, 397, 414, 447, 581
SduI	GDGCHC	4 cut(s)	266, 323, 336, 375
SfaNI	GCATC	2 cut(s)	859, 910
SfcI	CTRYAG	2 cut(s)	590, 635
SfoI	GGCGCC	2 cut(s)	157, 208
Sfr274I	CTCGAG	1 cut(s)	269
Sfr303I	CCGCGG	1 cut(s)	345
SgrAI	CRCCGGYG	1 cut(s)	203
SgrBI	CCGCGG	1 cut(s)	345
SinI	GGWCC	5 cut(s)	274, 351, 397, 447, 581
SlaI	CTCGAG	1 cut(s)	269
SmlI	CTYRAG	1 cut(s)	269
SmoI	CTYRAG	1 cut(s)	269
Sse9I	AATT	1 cut(s)	770
SseBI	AGGCCT	1 cut(s)	852
SspDI	GGCGCC	2 cut(s)	155, 206
SspMI	CTAG	4 cut(s)	503, 954, 990, 994
StuI	AGGCCT	1 cut(s)	852
StyI	CCWWGG	2 cut(s)	393, 699
TaaI	ACNGT	1 cut(s)	937
TaiI	ACGT	5 cut(s)	108, 252, 380, 443, 983
TaqI	TCGA	7 cut(s)	183, 198, 225, 270, 432, 456, 888
TaqII	GACCGA	1 cut(s)	464
TasI	AATT	1 cut(s)	770
TauI	GCSGC	4 cut(s)	90, 344, 347, 734
TfiI	GAWTC	1 cut(s)	792
Tru1I	TTAA	1 cut(s)	884
Tru9I	TTAA	1 cut(s)	884
TscAI	CASTG	3 cut(s)	671, 781, 942
TseFI	GTSAC	2 cut(s)	31, 776
TseI	GCWGC	4 cut(s)	515, 592, 634, 872
Tsp45I	GTSAC	2 cut(s)	31, 776
TspDTI	ATGAA	1 cut(s)	40
TspGWI	ACGGA	1 cut(s)	100
TspRI	CASTG	3 cut(s)	671, 781, 942
VneI	GTGCAC	1 cut(s)	262
VpaK11BI	GGWCC	5 cut(s)	274, 351, 397, 447, 581
VspI	ATTAAT	1 cut(s)	884
XceI	RCATGY	2 cut(s)	576, 686
XcmI	CCANNNNNNNNNTGG	1 cut(s)	391
XhoI	CTCGAG	1 cut(s)	269
XmiI	GTMKAC	1 cut(s)	114
XspI	CTAG	4 cut(s)	503, 954, 990, 994
ZraI	GACGTC	2 cut(s)	441, 981

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.