Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0007107

Physical Location & Seq

Genomic Coordinates Forward (+)

29315689 .. 29318583

Gene Structure 2895 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1226900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGAGAGGCAGAAGCCGCGGCCGAGCAAGGGAGTCGTTCAACCCACGGCCACCACCAGCGACGCCGCTGGGCCACTTCCGCCTCCAACGAGACTCCGATGCCAGCTTCGCAAGCAGCCGCCCTTCCTCGGTGGGCATGGGTCCCACCACCGCAGCCCTCGACCTGTACAAAGACCGCTCTTTCCAGCAGTCCACCGTCTCCGCCATCAATTCCTACCTTTCCTCCCACTCCCTCCAATTCTCCCTCAAATTCCCGATCCCCTCCGCCCGGGAAATCACCGAAACCCTGAAATTCCTCCTCGCCCGCCTCGACTACCCTTCGCCCAAGCTCGAGGACGACCTCCCCCTCCTCCTCAAGTTCCTGAAATGCCCCTTCAAGCCCAACAAGTCCTTGCTCCGAAACCCCACCGTCAACGCCCACCAGTGGCCCACTCTGCTCGCCGTCATCCACTGGGTCTTCCAGGTTGTGCTCTACACCGACCATCTCGCCGCCGATTCCCGGGCCTTCGTCGAGAACAATGCCATGTCCGAGTACGCCCTGGAGAGCTACTTGCATTATATACATGGCAATGACGACGCGGTGGAGGCCTTGGACCGGGATTTCTTGGACAAGTTGGACAGGGAGAAGGAGAATGCGGAGGAAAATGTCAGGGTTTTGGAGGCAACTGCCACGGAGCTGCAGGGGAGGGTGGAAACAATGCGGTCGGAGCCGTCCAGGAGGGAAGCGCTGGAGAAGGAGAGGGGTTTGTTGGAGGGGGATGTGGTCAAGTTTAATGAAATCATAGGGAATCTGGAGAAAAGTATCGCGAATTTGGAGGCGGTGTTGGAGGGGAGAGAGAAGGAATTGGAGGCCAAAGTGGTGGATAATAAGAGGATTTGCCAAGAGAATGCGGAGTTGAATAAGAGGGTGGAGTTGCAGACCTTCAATGCCAGGGATGTGGATAGAATGAAGAGGGAGTTGCAGGCTGTGGAGAGGGATATTGGGGAAGCCGAGCTCGAAAGGAATGCTTGGGAGGAGAAGGCTTGGGAAATTGATAACATGCTTAGCCATAAGTTTAAGGACCTTGAGGCTGTGGCCATGGACTGCAACCAGGCCATGAGGAGGTTGAAACTTGGTAATGGATTTCAGTATTTATTGAATGCTAAGGGATCGACGCCAGCTGAGATTATGGGGATTGACTACAAATCAACTTTAAAGCCTGCGCTTGACGCCTACTCAGAAGACATAAAGAAAAGCTCTGTGGAAAAACTGGAAGAGTTGATTTCCCTTCAGAAACAGTCAAGTGAACTTTCTGCTCAGATTGAGGGCAAACGAAATTTTATAGCAACGCTTCAATCTCATATCAACGAAGTAAGTGGATCAAGATTAAGTCTTAGACATATTACTTTCTTTGTTGTGCATAGGAAGGGAATGAGGGGGTTGATGCTGCTCATGTGGGTTCGTAGGATGCTGCTTGCAGACGAGGGAGACGGGACTAGCAATCCCGTTGTTTTTGGGGGGCCTCGCAAAGACCTCCTAGTGAGGGATTTAGTCGAGGCAAGTCCTCCTTTGTCCTATTTAACTTGGTCCCGCCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0003674 GO:0005198 GO:0005200 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006996 GO:0007010 GO:0007049 GO:0007059 GO:0007080 GO:0008150 GO:0008608 GO:0009987 GO:0016043 GO:0022402 GO:0031262 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070013 GO:0071840 GO:0098687 GO:0098813 GO:0140014 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ndc80_HEC

Protein Analysis

526

Amino Acids

59.71

Weight (kDa)

6.21

Isoelectric Point (pI)

45.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ndc80_HEC	PF03801	56 - 161	1.7e-15	HEC/Ndc80p family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007107)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54630
fragaria_vesca	FvH4_5g35831
malus_domestica	MD08G1226900.v1.1 MD15G1419200.v1.1
prunus_persica	Prupe.1G564000_v2.0.a1
pyrus_communis	pycom08g19790 pycom15g37210
rosa_chinensis	RchiOBHm_Chr5g0046031
rosa_laevigata	RLG00000034393
rosa_multiflora	Rmu_co8491665.1_g000002 Rmu_sc0001035.1_g000029 Rmu_sc0001212.1_g000011
rosa_roxburghii	Rroxscaffold_1G00035270 Rroxscaffold_1G00035320 Rroxscaffold_3G00224020
rosa_rugosa	Rorug05G0226200 Rorug07G0304000
rosa_samantha	Rh5AG306800 Rh5BG315500 Rh5CG341700 Rh5CG342000 Rh5DG325500
rosa_wichuraiana	Rw0G011960 Rw5G028710 Rw7G038200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	177
AccII	CGCG	3 cut(s)	18, 578, 806
AclWI	GGATC	3 cut(s)	250, 1156, 1366
AcoI	YGGCCR	3 cut(s)	19, 47, 1074
AcsI	RAATTY	4 cut(s)	248, 290, 808, 1315
AcuI	CTGAAG	1 cut(s)	1253
AcyI	GRCGYC	3 cut(s)	62, 1154, 1209
AfaI	GTAC	2 cut(s)	167, 533
AfeI	AGCGCT	1 cut(s)	726
AfiI	CCNNNNNNNGG	8 cut(s)	28, 127, 267, 423, 498, 594, 1101, 1522
AgsI	TTSAA	7 cut(s)	40, 376, 898, 925, 1108, 1138, 1334
AjnI	CCWGG	5 cut(s)	459, 537, 713, 929, 1089
AluBI	AGCT	7 cut(s)	105, 328, 546, 676, 994, 1160, 1236
AluI	AGCT	7 cut(s)	105, 328, 546, 676, 994, 1160, 1236
Alw21I	GWGCWC	2 cut(s)	471, 996
Alw26I	GTCTC	3 cut(s)	84, 202, 1461
AlwI	GGATC	3 cut(s)	250, 1156, 1366
Ama87I	CYCGRG	3 cut(s)	267, 329, 498
Aor51HI	AGCGCT	1 cut(s)	726
ApeKI	GCWGC	5 cut(s)	114, 152, 676, 1426, 1450
ApoI	RAATTY	4 cut(s)	248, 290, 808, 1315
AspLEI	GCGC	2 cut(s)	727, 1204
AspS9I	GGNCC	8 cut(s)	70, 140, 426, 501, 592, 1060, 1499, 1566
AsuC2I	CCSGG	5 cut(s)	268, 269, 499, 500, 596
AsuHPI	GGTGA	1 cut(s)	268
AvaI	CYCGRG	3 cut(s)	267, 329, 498
AvaII	GGWCC	4 cut(s)	140, 592, 1060, 1566
BalI	TGGCCA	1 cut(s)	1076
BanII	GRGCYC	1 cut(s)	996
BbsI	GAAGAC	2 cut(s)	448, 1227
Bbv12I	GWGCWC	2 cut(s)	471, 996
BbvI	GCAGC	5 cut(s)	126, 164, 663, 1413, 1437
BccI	CCATC	2 cut(s)	212, 489
BceAI	ACGGC	3 cut(s)	62, 425, 694
BcgI	CGANNNNNNTGC	6 cut(s)	15, 49, 500, 534, 986, 1020
BciT130I	CCWGG	5 cut(s)	461, 539, 715, 931, 1091
BcnI	CCSGG	5 cut(s)	268, 269, 499, 500, 596
BcoDI	GTCTC	3 cut(s)	84, 202, 1461
BfaI	CTAG	2 cut(s)	1476, 1517
BfmI	CTRYAG	1 cut(s)	677
BfoI	RGCGCY	1 cut(s)	728
BlpI	GCTNAGC	1 cut(s)	1043
Bme18I	GGWCC	4 cut(s)	140, 592, 1060, 1566
BmeT110I	CYCGRG	3 cut(s)	267, 329, 498
BmgT120I	GGNCC	8 cut(s)	70, 140, 426, 501, 592, 1060, 1499, 1566
BmiI	GGNNCC	5 cut(s)	141, 142, 708, 1500, 1568
BmrI	ACTGGG	1 cut(s)	460
BmsI	GCATC	3 cut(s)	88, 1413, 1437
BmuI	ACTGGG	1 cut(s)	460
BpiI	GAAGAC	2 cut(s)	448, 1227
BpmI	CTGGAG	3 cut(s)	560, 749, 812
Bpu10I	CCTNAGC	1 cut(s)	1143
Bpu1102I	GCTNAGC	1 cut(s)	1043
BpuEI	CTTGAG	2 cut(s)	338, 1085
BpuMI	CCSGG	5 cut(s)	268, 269, 499, 500, 596
BsaHI	GRCGYC	3 cut(s)	62, 1154, 1209
BsaXI	ACNNNNNCTCC	4 cut(s)	206, 236, 806, 836
Bsc4I	CCNNNNNNNGG	8 cut(s)	28, 127, 267, 423, 498, 594, 1101, 1522
Bse1I	ACTGG	4 cut(s)	421, 455, 1254, 1573
Bse3DI	GCAATG	1 cut(s)	574
BseBI	CCWGG	5 cut(s)	461, 539, 715, 931, 1091
BseGI	GGATG	4 cut(s)	444, 763, 940, 1452
BseLI	CCNNNNNNNGG	8 cut(s)	28, 127, 267, 423, 498, 594, 1101, 1522
BseMI	GCAATG	1 cut(s)	574
BseMII	CTCAG	3 cut(s)	1152, 1230, 1310
BseNI	ACTGG	4 cut(s)	421, 455, 1254, 1573
BseRI	GAGGAG	5 cut(s)	287, 338, 341, 1028, 1114
BseX3I	CGGCCG	1 cut(s)	19
BseXI	GCAGC	5 cut(s)	126, 164, 663, 1413, 1437
BseYI	CCCAGC	1 cut(s)	67
Bsh1236I	CGCG	3 cut(s)	18, 578, 806
Bsh1285I	CGRYCG	2 cut(s)	22, 704
BsiEI	CGRYCG	2 cut(s)	22, 704
BsiHKAI	GWGCWC	2 cut(s)	471, 996
BsiHKCI	CYCGRG	3 cut(s)	267, 329, 498
BsiSI	CCGG	3 cut(s)	268, 499, 595
BslFI	GGGAC	3 cut(s)	126, 1486, 1552
BslI	CCNNNNNNNGG	8 cut(s)	28, 127, 267, 423, 498, 594, 1101, 1522
BsmAI	GTCTC	3 cut(s)	84, 202, 1461
BsmBI	CGTCTC	2 cut(s)	202, 1461
BsmFI	GGGAC	3 cut(s)	126, 1486, 1552
BsmI	GAATGC	4 cut(s)	637, 892, 1009, 1144
BsoBI	CYCGRG	3 cut(s)	267, 329, 498
Bsp1286I	GDGCHC	2 cut(s)	471, 996
Bsp1407I	TGTACA	1 cut(s)	165
Bsp143I	GATC	3 cut(s)	255, 1148, 1358
Bsp1720I	GCTNAGC	1 cut(s)	1043
Bsp19I	CCATGG	1 cut(s)	1077
Bsp68I	TCGCGA	1 cut(s)	806
BspCNI	CTCAG	3 cut(s)	1153, 1229, 1309
BspFNI	CGCG	3 cut(s)	18, 578, 806
BspLI	GGNNCC	5 cut(s)	141, 142, 708, 1500, 1568
BspMAI	CTGCAG	1 cut(s)	681
BspPI	GGATC	3 cut(s)	250, 1156, 1366
BsrBI	CCGCTC	1 cut(s)	177
BsrDI	GCAATG	1 cut(s)	574
BsrGI	TGTACA	1 cut(s)	165
BsrI	ACTGG	4 cut(s)	421, 455, 1254, 1573
BssMI	GATC	3 cut(s)	255, 1148, 1358
BssNI	GRCGYC	3 cut(s)	62, 1154, 1209
BssT1I	CCWWGG	2 cut(s)	588, 1077
Bst2UI	CCWGG	5 cut(s)	461, 539, 715, 931, 1091
Bst4CI	ACNGT	3 cut(s)	196, 409, 1278
Bst6I	CTCTTC	2 cut(s)	944, 1248
BstACI	GRCGYC	3 cut(s)	62, 1154, 1209
BstAUI	TGTACA	1 cut(s)	165
BstC8I	GCNNGC	8 cut(s)	103, 112, 304, 438, 963, 1158, 1200, 1455
BstDEI	CTNAG	6 cut(s)	1043, 1143, 1161, 1216, 1296, 1373
BstDSI	CCRYGG	4 cut(s)	16, 44, 669, 1077
BstF5I	GGATG	4 cut(s)	444, 763, 940, 1452
BstFNI	CGCG	3 cut(s)	18, 578, 806
BstH2I	RGCGCY	1 cut(s)	728
BstHHI	GCGC	2 cut(s)	727, 1204
BstKTI	GATC	3 cut(s)	258, 1151, 1361
BstMAI	GTCTC	3 cut(s)	84, 202, 1461
BstMBI	GATC	3 cut(s)	255, 1148, 1358
BstMCI	CGRYCG	2 cut(s)	22, 704
BstMWI	GCNNNNNNNGC	8 cut(s)	15, 78, 107, 111, 433, 584, 706, 1208
BstNI	CCWGG	5 cut(s)	461, 539, 715, 931, 1091
BstNSI	RCATGY	1 cut(s)	1042
BstSFI	CTRYAG	1 cut(s)	677
BstUI	CGCG	3 cut(s)	18, 578, 806
BstV1I	GCAGC	5 cut(s)	126, 164, 663, 1413, 1437
BstV2I	GAAGAC	2 cut(s)	448, 1227
BstXI	CCANNNNNNTGG	2 cut(s)	859, 937
BstZI	CGGCCG	1 cut(s)	19
BtgI	CCRYGG	4 cut(s)	16, 44, 669, 1077
BtsCI	GGATG	4 cut(s)	444, 763, 940, 1452
BtsIMutI	CAGTG	2 cut(s)	428, 448
BtuMI	TCGCGA	1 cut(s)	806
Cac8I	GCNNGC	8 cut(s)	103, 112, 304, 438, 963, 1158, 1200, 1455
CfoI	GCGC	2 cut(s)	727, 1204
Cfr13I	GGNCC	8 cut(s)	70, 140, 426, 501, 592, 1060, 1499, 1566
Cfr42I	CCGCGG	1 cut(s)	19
Cfr9I	CCCGGG	2 cut(s)	267, 498
CseI	GACGC	4 cut(s)	70, 584, 1162, 1217
Csp6I	GTAC	2 cut(s)	166, 532
CviAII	CATG	7 cut(s)	136, 523, 563, 1039, 1078, 1096, 1432
CviQI	GTAC	2 cut(s)	166, 532
DdeI	CTNAG	6 cut(s)	1043, 1143, 1161, 1216, 1296, 1373
DpnI	GATC	3 cut(s)	257, 1150, 1360
DpnII	GATC	3 cut(s)	255, 1148, 1358
DraI	TTTAAA	1 cut(s)	1194
EaeI	YGGCCR	3 cut(s)	19, 47, 1074
EagI	CGGCCG	1 cut(s)	19
Eam1104I	CTCTTC	2 cut(s)	944, 1248
EarI	CTCTTC	2 cut(s)	944, 1248
EciI	GGCGGA	3 cut(s)	68, 190, 253
Ecl136II	GAGCTC	1 cut(s)	994
EclXI	CGGCCG	1 cut(s)	19
Eco130I	CCWWGG	2 cut(s)	588, 1077
Eco147I	AGGCCT	1 cut(s)	587
Eco24I	GRGCYC	1 cut(s)	996
Eco47I	GGWCC	4 cut(s)	140, 592, 1060, 1566
Eco47III	AGCGCT	1 cut(s)	726
Eco52I	CGGCCG	1 cut(s)	19
Eco53kI	GAGCTC	1 cut(s)	994
Eco57I	CTGAAG	1 cut(s)	1253
Eco88I	CYCGRG	3 cut(s)	267, 329, 498
EcoICRI	GAGCTC	1 cut(s)	994
EcoO109I	RGGNCCY	3 cut(s)	140, 1060, 1499
EcoRII	CCWGG	5 cut(s)	459, 537, 713, 929, 1089
EcoT14I	CCWWGG	2 cut(s)	588, 1077
EcoT38I	GRGCYC	1 cut(s)	996
ErhI	CCWWGG	2 cut(s)	588, 1077
Esp3I	CGTCTC	2 cut(s)	202, 1461
FaeI	CATG	7 cut(s)	139, 526, 566, 1042, 1081, 1099, 1435
FalI	AAGNNNNNCTT	4 cut(s)	991, 1023, 1531, 1563
FaqI	GGGAC	3 cut(s)	126, 1486, 1552
FatI	CATG	7 cut(s)	135, 522, 562, 1038, 1077, 1095, 1431
FauI	CCCGC	1 cut(s)	311
FokI	GGATG	4 cut(s)	431, 770, 947, 1459
FriOI	GRGCYC	1 cut(s)	996
FspBI	CTAG	2 cut(s)	1476, 1517
GlaI	GCGC	2 cut(s)	726, 1203
GsaI	CCCAGC	1 cut(s)	71
GsuI	CTGGAG	3 cut(s)	560, 749, 812
HaeII	RGCGCY	1 cut(s)	728
HapII	CCGG	3 cut(s)	268, 499, 595
HgaI	GACGC	4 cut(s)	70, 584, 1162, 1217
HhaI	GCGC	2 cut(s)	727, 1204
Hin1I	GRCGYC	3 cut(s)	62, 1154, 1209
Hin1II	CATG	7 cut(s)	139, 526, 566, 1042, 1081, 1099, 1435
Hin6I	GCGC	2 cut(s)	725, 1202
HinP1I	GCGC	2 cut(s)	725, 1202
HincII	GTYRAC	1 cut(s)	412
HindII	GTYRAC	1 cut(s)	412
HinfI	GANTC	4 cut(s)	32, 92, 494, 787
HpaII	CCGG	3 cut(s)	268, 499, 595
HphI	GGTGA	1 cut(s)	268
Hpy166II	GTNNAC	3 cut(s)	192, 412, 1286
Hpy188I	TCNGA	7 cut(s)	97, 398, 529, 706, 1219, 1272, 1299
Hpy188III	TCNNGA	6 cut(s)	253, 361, 511, 791, 805, 1362
Hpy8I	GTNNAC	3 cut(s)	192, 412, 1286
Hpy99I	CGWCG	4 cut(s)	64, 512, 578, 1156
HpyCH4III	ACNGT	3 cut(s)	196, 409, 1278
HpyCH4V	TGCA	7 cut(s)	553, 679, 916, 961, 1086, 1399, 1457
HpyF10VI	GCNNNNNNNGC	8 cut(s)	15, 78, 107, 111, 433, 584, 706, 1208
HpyF3I	CTNAG	6 cut(s)	1043, 1143, 1161, 1216, 1296, 1373
Hsp92I	GRCGYC	3 cut(s)	62, 1154, 1209
Hsp92II	CATG	7 cut(s)	139, 526, 566, 1042, 1081, 1099, 1435
HspAI	GCGC	2 cut(s)	725, 1202
KflI	GGGWCCC	1 cut(s)	140
KspI	CCGCGG	1 cut(s)	19
Kzo9I	GATC	3 cut(s)	255, 1148, 1358
LmnI	GCTCC	3 cut(s)	399, 673, 706
Lsp1109I	GCAGC	5 cut(s)	126, 164, 663, 1413, 1437
LweI	GCATC	3 cut(s)	88, 1413, 1437
MaeI	CTAG	2 cut(s)	1476, 1517
MalI	GATC	3 cut(s)	257, 1150, 1360
MbiI	CCGCTC	1 cut(s)	177
MboI	GATC	3 cut(s)	255, 1148, 1358
MboII	GAAGA	4 cut(s)	448, 961, 1232, 1265
MhlI	GDGCHC	2 cut(s)	471, 996
MlsI	TGGCCA	1 cut(s)	1076
MluCI	AATT	8 cut(s)	208, 236, 248, 290, 808, 842, 1029, 1315
MluNI	TGGCCA	1 cut(s)	1076
MlyI	GAGTC	2 cut(s)	41, 86
MmeI	TCCRAC	5 cut(s)	109, 594, 684, 729, 804
Mox20I	TGGCCA	1 cut(s)	1076
MscI	TGGCCA	1 cut(s)	1076
MseI	TTAA	5 cut(s)	771, 1056, 1193, 1367, 1559
MslI	CAYNNNNRTG	1 cut(s)	567
Msp20I	TGGCCA	1 cut(s)	1076
MspA1I	CMGCKG	3 cut(s)	18, 67, 1160
MspI	CCGG	3 cut(s)	268, 499, 595
Mva1269I	GAATGC	4 cut(s)	637, 892, 1009, 1144
MvaI	CCWGG	5 cut(s)	461, 539, 715, 931, 1091
MvnI	CGCG	3 cut(s)	18, 578, 806
MwoI	GCNNNNNNNGC	8 cut(s)	15, 78, 107, 111, 433, 584, 706, 1208
NciI	CCSGG	5 cut(s)	268, 269, 499, 500, 596
NcoI	CCATGG	1 cut(s)	1077
NdeII	GATC	3 cut(s)	255, 1148, 1358
NlaIII	CATG	7 cut(s)	139, 526, 566, 1042, 1081, 1099, 1435
NlaIV	GGNNCC	5 cut(s)	141, 142, 708, 1500, 1568
NmeAIII	GCCGAG	2 cut(s)	47, 1015
NruI	TCGCGA	1 cut(s)	806
NspI	RCATGY	1 cut(s)	1042
PaeR7I	CTCGAG	1 cut(s)	329
PceI	AGGCCT	1 cut(s)	587
PcsI	WCGNNNNNNNCGW	1 cut(s)	306
PctI	GAATGC	4 cut(s)	637, 892, 1009, 1144
PfeI	GAWTC	2 cut(s)	494, 787
PfoI	TCCNGGA	1 cut(s)	713
PleI	GAGTC	2 cut(s)	40, 86
PpsI	GAGTC	2 cut(s)	40, 86
PpuMI	RGGWCCY	2 cut(s)	140, 1060
Psp124BI	GAGCTC	1 cut(s)	996
Psp5II	RGGWCCY	2 cut(s)	140, 1060
Psp6I	CCWGG	5 cut(s)	459, 537, 713, 929, 1089
PspFI	CCCAGC	1 cut(s)	67
PspGI	CCWGG	5 cut(s)	459, 537, 713, 929, 1089
PspN4I	GGNNCC	5 cut(s)	141, 142, 708, 1500, 1568
PspPI	GGNCC	8 cut(s)	70, 140, 426, 501, 592, 1060, 1499, 1566
PspPPI	RGGWCCY	2 cut(s)	140, 1060
PspXI	VCTCGAGB	1 cut(s)	329
PstI	CTGCAG	1 cut(s)	681
PvuII	CAGCTG	1 cut(s)	1160
RruI	TCGCGA	1 cut(s)	806
RsaI	GTAC	2 cut(s)	167, 533
RsaNI	GTAC	2 cut(s)	166, 532
RseI	CAYNNNNRTG	1 cut(s)	567
SacI	GAGCTC	1 cut(s)	996
SacII	CCGCGG	1 cut(s)	19
SaqAI	TTAA	5 cut(s)	771, 1056, 1193, 1367, 1559
Sau3AI	GATC	3 cut(s)	255, 1148, 1358
Sau96I	GGNCC	8 cut(s)	70, 140, 426, 501, 592, 1060, 1499, 1566
SchI	GAGTC	2 cut(s)	41, 86
SduI	GDGCHC	2 cut(s)	471, 996
SfaNI	GCATC	3 cut(s)	88, 1413, 1437
SfcI	CTRYAG	1 cut(s)	677
Sfr274I	CTCGAG	1 cut(s)	329
Sfr303I	CCGCGG	1 cut(s)	19
SgrBI	CCGCGG	1 cut(s)	19
SinI	GGWCC	4 cut(s)	140, 592, 1060, 1566
SlaI	CTCGAG	1 cut(s)	329
SmaI	CCCGGG	2 cut(s)	269, 500
SmiMI	CAYNNNNRTG	1 cut(s)	567
SmlI	CTYRAG	3 cut(s)	329, 353, 1064
SmoI	CTYRAG	3 cut(s)	329, 353, 1064
Sse9I	AATT	8 cut(s)	208, 236, 248, 290, 808, 842, 1029, 1315
SseBI	AGGCCT	1 cut(s)	587
SspMI	CTAG	2 cut(s)	1476, 1517
SstI	GAGCTC	1 cut(s)	996
StuI	AGGCCT	1 cut(s)	587
StyI	CCWWGG	2 cut(s)	588, 1077
TaaI	ACNGT	3 cut(s)	196, 409, 1278
TaqI	TCGA	7 cut(s)	159, 309, 330, 510, 996, 1151, 1533
TasI	AATT	8 cut(s)	208, 236, 248, 290, 808, 842, 1029, 1315
TatI	WGTACW	1 cut(s)	165
TauI	GCSGC	5 cut(s)	18, 21, 67, 120, 491
TfiI	GAWTC	2 cut(s)	494, 787
Tru1I	TTAA	5 cut(s)	771, 1056, 1193, 1367, 1559
Tru9I	TTAA	5 cut(s)	771, 1056, 1193, 1367, 1559
TscAI	CASTG	2 cut(s)	428, 455
TseI	GCWGC	5 cut(s)	114, 152, 676, 1426, 1450
TspDTI	ATGAA	2 cut(s)	789, 962
TspGWI	ACGGA	1 cut(s)	686
TspMI	CCCGGG	2 cut(s)	267, 498
TspRI	CASTG	2 cut(s)	428, 455
VpaK11BI	GGWCC	4 cut(s)	140, 592, 1060, 1566
XapI	RAATTY	4 cut(s)	248, 290, 808, 1315
XceI	RCATGY	1 cut(s)	1042
XhoI	CTCGAG	1 cut(s)	329
XmaI	CCCGGG	2 cut(s)	267, 498
XspI	CTAG	2 cut(s)	1476, 1517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.