Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006784

Physical Location & Seq

Genomic Coordinates Reverse (-)

20993649 .. 20998695

Gene Structure 5047 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G56690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3069 bp

ATGCCTTCGAAGAAGAAGCAGTCGAGGACGCCATCACGGCTATCCAATTCGGAACCGCCTGCATCTCCAAGAACTCCGGCGTCTTCAACAACTAGTCGAGATACAGATTCTATCAACGAAGAAGAGCTTAGGCGCAGTATTGAAGAAGCGTCTGCTGCGTTTCCTTGTCTTCTCGGAAAATCTGCAATCATCGCAAGAGTAGCCGATGTTGCATCAGAATCTATCAGAGGCTCTAAGATTTGGCTATCGGAAACTTCTATGGTCGCTGCTTCTCTCAGCCCTGGCTCCACTGTATCGGTATCACTAGCTTCTCCGGAGAGTAGATTTTCGAGAAGCTTCCCACTCAGCTCGATTAAAGCTGAATATGGAGATGACAGTGAGAGTATCATTGCTGATGAACCAGGAAACTATTTTGTGCTTACCACCGTTTTCTCTTCTTCAAAGGTTTTCAAAGATGCTGTTCGAATTTCATTGAATCTTTGCTATGGGCTTGGTTGTCCTGTTTCAGGCAGGACTGTTTTTGTTTATCCTGTTAGCGGACCTTCTTTAAGTGATCAATTCAACGGGAATGGTAGATCTCGCTATGATGATGTTAACCATCTATCGCTGCTTGCCTGCAAAGAGTTGTGTTTAGAGTTGACTCCCTTCAGGAATATGTTACAAGCTAAGAATGCTTTTGAAAGTTCTTACGAGCAGAACGGAAATGGGAATTCAACTCCTAAGACACCAGCAAACTTGCAAAAGTTTAGTTCTCCTCGCCCCAAATCTCCGGTTTCACCAATCATAGAGGACTCTGTTTTCAGTTGCAAGCAGCGGTTTTCATCTGAAAGCTCGATTGATCTACGAGAGGTGTTGAGCAATGAAAGTTCGAAAAAACTTTTGCAGATTTGTGCAAGTTCGTGGCTTTACCCTTGTAGCCTGCTATATGGGAATTTTGTGTCTGTGCCAATTCTCTCAGAAATCTGTATATTCTGCGTCAAAAGAGCTGATAAAAGGCCATCTGACACATCCAACAGAAATCATGCTTTTATGATCAATCAGGAAACTAAAGTCTACCTCCATCATACATTAGACTTAGCATCTGAAATTCAAGGGAGAACATTTGTACAAGGTCTGCAATTTGATGAAGGAGAAAATGTGGGATGTGAAATCTCAAAGTTAGGTGGTCTCTCTAAAGAATATGCAATTTTAAGGGACATCATTGATTCTTCGTCCATAAAGAATTCCTTATCAAGTCTTGGTTTGCGACCTACCAAGGGAGTGCTTATTCATGGACCTCCAGGCACAGGAAAAACATCTTTGGCTCGAACCTTTGCCCGCCATTCTGGTGTCAACTTTTTCTCTGTGAATGGACCAGAGATTATAAGCCAGTATTTGGGTGAAAGCGAGAAAGCTCTAGATGAGGTTTTCAGATCTGCTAGCAATGCTACACCAGCTGTGGTGTTCATTGATGACTTGGATGCCATTGCTCCTGCTCGGAAAGAAGGAGGCGAAGAATTGTCTCAGAGGATGGTAGCTACATTACTGAATTTAATGGATGGAATAAGTAGGACGGATGGCGTTGTTGTAATTGCTGCAACCAATAGGCCTGATAGCATTGAGCCCGCCCTTAGACGGCCAGGAAGACTTGACAGGGAAATTGAAATTGGTGTACCATCTTCTACACAACGGTCCGATATACTTCACATAATTCTCCGTGGGATGCGGCATTCACTTTCAAACATCCAGGTTGAACAGCTTGCTATGGCAACCCATGGTTTTGTTGGTGCAGATCTGTCTGCACTGTGTTGTGAGGCAGCCTTTGTCTGCTTAAGGCGGCATCTTGATCAGAGTTCCTCTTCTAGCAATTTGCCCCTTGAAGAAGCACCTATTGCTGAGTCCTCGTCAAATATGTCAGACATATCATCTGATAGTTCGGATTCTGCATCGTCATGTATCACAATTTCAGCCACAACTTCAGGGGCTCAGCGTTCATTTAGTTTGGATGAGACAGTTTCCCTAGTAGCGGATGATATTCAAAACAATGGCAACTCTTGTTCTGAACAGATGCTTAGAAAACAAGGAGAACATACCTTAAGTGTTGGATTTGAAGATTTTGAAAATGCTAAGACCAAAATCAGACCTAGTGCCATGCGAGAGGTGATATTAGAGGTTCCTAAAGTTAACTGGGAAGATGTTGGTGGCCAAAATGAGGTGAAAAATCAGCTAATGGAAGCAGTAGAATGGCCTCAAAAACATCAGGACGCATTCAAGAGAATAGGTACAAGGCCACCAAGTGGGATACTGATGTTTGGTCCTCCTGGATGTAGCAAGACCCTTATGGCACGTGCAGTAGCTTCTGAAGCCAAGCTGAATTTTCTTGCTGTCAAAGGTCCAGAACTATTCAGCAAATGGGTTGGTGAATCCGAAAAGGCTGTTAGGTCCCTATTCGCAAAGGCAAGAGCAAATGCCCCCTCCATTATCTTTTTCGATGAGATAGATAGTCTTGCCTCCATTAGGGGGAAAGAAAATGATGGGGTGTCAGTTTCAGACAGAGTTATGAGCCAACTTCTTGTGGAGCTCGATGGTTTGCATCAAAGAGTTGGTGTTACCGTCATTGCTGCTACAAACCGGCCAGACAAGATCGATTCTGCCCTACTAAGACCTGGGCGCTTTGATCGCTTGCTATATGTCGGACCTCCTAATGAAACTGATCGCGAAGCAATACTCAAAATCCATTTGCGTAAAATCCCATGCAGCTCTGATATTTGTTTAAAGGAATTGGCTTCCATTACCAAAGGCTATACAGGAGCTGACATATCATTGATATGCAGAGAAGCAGCTATTGCTGCACTTGAGGAGAGTCTTGAAATGGAGGAAATAAGCATGCGACATTTAAAAGCTGCGATTAGCCAAATCGAACCAACAGAGATTCTGTCTTACAAAGCACTGTCTGAAAAATTCCAAAGACTTGTCCATACAGACCCACAAAGAGAAGAGGAGGTTACACAACCAGGAAACAAAAGCCGATCTCTATGGACACCATTGAGATCAGTTGCCATGTTTCTTCGCCGCCACATTGCTTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

AAA

Protein Analysis

1022

Amino Acids

111.52

Weight (kDa)

6.05

Isoelectric Point (pI)

54.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DPBB_CI111	PF26429	46 - 178	2.1e-47	CI111 double-psi beta barrel domain
AAA_16	PF13191	419 - 523	1.4e-07	AAA ATPase domain
AAA	PF00004	421 - 550	1.7e-42	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	575 - 613	2.5e-12	AAA+ lid domain
AAA	PF00004	761 - 892	1.9e-42	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	915 - 960	3.4e-13	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56690
fragaria_vesca	FvH4_6g32040 FvH4_6g32040 FvH4_6g32040 FvH4_6g32040 FvH4_6g32040
malus_domestica	MD09G1206200.v1.1
prunus_persica	Prupe.3G062600_v2.0.a1 Prupe.3G062600_v2.0.a1 Prupe.3G062600_v2.0.a1 Prupe.3G062600_v2.0.a1 Prupe.3G062600_v2.0.a1
pyrus_communis	pycom09g12300
rosa_chinensis	RchiOBHm_Chr2g0139701
rosa_laevigata	RLG00000019827
rosa_multiflora	Rmu_co8172878.1_g000001 Rmu_sc0009714.1_g000008
rosa_roxburghii	Rroxscaffold_2G00105270
rosa_rugosa	Rorug02G0359300 Rorug04G0364300 Rorug04G0364400
rosa_samantha	Rh2AG397600 Rh2AG409100 Rh2BG419400 Rh4CG452300
rosa_wichuraiana	Rw2G033460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1364
AccB7I	CCANNNNNTGG	2 cut(s)	1375, 2276
AccI	GTMKAC	1 cut(s)	1053
AccII	CGCG	1 cut(s)	2697
AccIII	TCCGGA	1 cut(s)	313
AciI	CCGC	9 cut(s)	56, 537, 814, 1318, 1605, 1705, 1816, 2006, 3052
AcoI	YGGCCR	3 cut(s)	1616, 2182, 2612
AcsI	RAATTY	8 cut(s)	465, 709, 931, 1086, 1222, 1528, 2353, 2939
AcuI	CTGAAG	3 cut(s)	631, 1941, 2361
AcvI	CACGTG	1 cut(s)	2327
AcyI	GRCGYC	2 cut(s)	29, 80
AdeI	CACNNNGTG	1 cut(s)	2276
AfaI	GTAC	3 cut(s)	1107, 1653, 2263
AflII	CTTAAG	2 cut(s)	1810, 2074
AhlI	ACTAGT	1 cut(s)	92
AjnI	CCWGG	8 cut(s)	280, 400, 1279, 1618, 1725, 2299, 2644, 2992
AjuI	GAANNNNNNNTTGG	2 cut(s)	1629, 1661
Alw21I	GWGCWC	1 cut(s)	2562
Alw26I	GTCTC	3 cut(s)	1172, 1506, 1982
AlwNI	CAGNNNCTG	1 cut(s)	2792
Aor13HI	TCCGGA	1 cut(s)	313
AoxI	GGCC	7 cut(s)	995, 1586, 1616, 2182, 2225, 2267, 2612
ApoI	RAATTY	8 cut(s)	465, 709, 931, 1086, 1222, 1528, 2353, 2939
AspLEI	GCGC	2 cut(s)	135, 2652
AspS9I	GGNCC	8 cut(s)	539, 1274, 1352, 1671, 2294, 2372, 2421, 2675
AsuHPI	GGTGA	5 cut(s)	768, 1391, 2152, 2206, 2411
AsuII	TTCGAA	3 cut(s)	8, 463, 869
AsuNHI	GCTAGC	1 cut(s)	1418
AvaII	GGWCC	8 cut(s)	539, 1274, 1352, 1671, 2294, 2372, 2421, 2675
BaeI	ACNNNNGTAYC	2 cut(s)	2273, 2306
BalI	TGGCCA	1 cut(s)	2184
BanII	GRGCYC	3 cut(s)	1605, 1966, 2562
BbrPI	CACGTG	1 cut(s)	2327
BbsI	GAAGAC	3 cut(s)	75, 161, 1630
Bbv12I	GWGCWC	1 cut(s)	2562
BceAI	ACGGC	2 cut(s)	53, 1631
BciT130I	CCWGG	8 cut(s)	282, 402, 1281, 1620, 1727, 2301, 2646, 2994
BciVI	GTATCC	1 cut(s)	2274
BclI	TGATCA	3 cut(s)	553, 1032, 1825
BcoDI	GTCTC	3 cut(s)	1172, 1506, 1982
BcuI	ACTAGT	1 cut(s)	92
BfaI	CTAG	7 cut(s)	93, 305, 1397, 1419, 1842, 2000, 2124
BfoI	RGCGCY	1 cut(s)	2653
BfrI	CTTAAG	2 cut(s)	1810, 2074
BfuI	GTATCC	1 cut(s)	2274
BglI	GCCNNNNNGGC	1 cut(s)	37
BglII	AGATCT	3 cut(s)	575, 1412, 1771
BlpI	GCTNAGC	1 cut(s)	1965
Bme1390I	CCNGG	8 cut(s)	282, 402, 1281, 1620, 1727, 2301, 2646, 2994
Bme18I	GGWCC	8 cut(s)	539, 1274, 1352, 1671, 2294, 2372, 2421, 2675
BmgT120I	GGNCC	8 cut(s)	539, 1274, 1352, 1671, 2294, 2372, 2421, 2675
BmiI	GGNNCC	4 cut(s)	54, 286, 2154, 2423
BmrFI	CCNGG	8 cut(s)	282, 402, 1281, 1620, 1727, 2301, 2646, 2994
BmrI	ACTGGG	1 cut(s)	2176
BmtI	GCTAGC	1 cut(s)	1422
BmuI	ACTGGG	1 cut(s)	2176
BpiI	GAAGAC	3 cut(s)	75, 161, 1630
BpmI	CTGGAG	1 cut(s)	1263
Bpu10I	CCTNAGC	1 cut(s)	128
Bpu1102I	GCTNAGC	1 cut(s)	1965
Bpu14I	TTCGAA	3 cut(s)	8, 463, 869
BpuEI	CTTGAG	1 cut(s)	2855
Bsa29I	ATCGAT	1 cut(s)	2625
BsaAI	YACGTR	1 cut(s)	2327
BsaHI	GRCGYC	2 cut(s)	29, 80
BsaI	GGTCTC	1 cut(s)	1172
BsaJI	CCNNGG	5 cut(s)	280, 1254, 1696, 1753, 2645
BsaWI	WCCGGW	2 cut(s)	313, 769
BsaXI	ACNNNNNCTCC	2 cut(s)	1122, 1152
Bse118I	RCCGGY	1 cut(s)	2610
Bse1I	ACTGG	2 cut(s)	1369, 2171
Bse3DI	GCAATG	6 cut(s)	387, 865, 1429, 1464, 2595, 3057
BseAI	TCCGGA	1 cut(s)	313
BseBI	CCWGG	8 cut(s)	282, 402, 1281, 1620, 1727, 2301, 2646, 2994
BseCI	ATCGAT	1 cut(s)	2625
BseDI	CCNNGG	5 cut(s)	280, 1254, 1696, 1753, 2645
BseMI	GCAATG	6 cut(s)	387, 865, 1429, 1464, 2595, 3057
BseMII	CTCAG	6 cut(s)	289, 358, 969, 1517, 1866, 1979
BseNI	ACTGG	2 cut(s)	1369, 2171
BseRI	GAGGAG	3 cut(s)	744, 2852, 2993
BsgI	GTGCAG	4 cut(s)	1764, 1788, 2349, 2814
Bsh1236I	CGCG	1 cut(s)	2697
BshFI	GGCC	7 cut(s)	997, 1588, 1618, 2184, 2227, 2269, 2614
BshVI	ATCGAT	1 cut(s)	2625
BsiHKAI	GWGCWC	1 cut(s)	2562
BsiSI	CCGG	4 cut(s)	77, 314, 770, 2611
BslFI	GGGAC	2 cut(s)	1208, 2407
BsmAI	GTCTC	3 cut(s)	1172, 1506, 1982
BsmFI	GGGAC	2 cut(s)	1208, 2407
BsmI	GAATGC	3 cut(s)	676, 1708, 2246
BsnI	GGCC	7 cut(s)	997, 1588, 1618, 2184, 2227, 2269, 2614
Bso31I	GGTCTC	1 cut(s)	1172
Bsp119I	TTCGAA	3 cut(s)	8, 463, 869
Bsp1286I	GDGCHC	3 cut(s)	1605, 1966, 2562
Bsp13I	TCCGGA	1 cut(s)	313
Bsp1407I	TGTACA	1 cut(s)	1105
Bsp1720I	GCTNAGC	1 cut(s)	1965
Bsp19I	CCATGG	1 cut(s)	1753
Bsp68I	TCGCGA	1 cut(s)	2697
BspACI	CCGC	9 cut(s)	56, 537, 814, 1318, 1605, 1705, 1816, 2006, 3052
BspANI	GGCC	7 cut(s)	997, 1588, 1618, 2184, 2227, 2269, 2614
BspCNI	CTCAG	6 cut(s)	288, 357, 968, 1516, 1867, 1978
BspDI	ATCGAT	1 cut(s)	2625
BspEI	TCCGGA	1 cut(s)	313
BspFNI	CGCG	1 cut(s)	2697
BspLI	GGNNCC	4 cut(s)	54, 286, 2154, 2423
BspOI	GCTAGC	1 cut(s)	1422
BspQI	GCTCTTC	1 cut(s)	117
BspT104I	TTCGAA	3 cut(s)	8, 463, 869
BspTI	CTTAAG	2 cut(s)	1810, 2074
BspTNI	GGTCTC	1 cut(s)	1172
BsrDI	GCAATG	6 cut(s)	387, 865, 1429, 1464, 2595, 3057
BsrFI	RCCGGY	1 cut(s)	2610
BsrGI	TGTACA	1 cut(s)	1105
BsrI	ACTGG	2 cut(s)	1369, 2171
BssAI	RCCGGY	1 cut(s)	2610
BssECI	CCNNGG	5 cut(s)	280, 1254, 1696, 1753, 2645
BssNI	GRCGYC	2 cut(s)	29, 80
BssT1I	CCWWGG	2 cut(s)	1254, 1753
Bst2UI	CCWGG	8 cut(s)	282, 402, 1281, 1620, 1727, 2301, 2646, 2994
Bst4CI	ACNGT	9 cut(s)	292, 377, 427, 517, 1671, 1785, 1993, 2593, 2931
Bst6I	CTCTTC	4 cut(s)	117, 439, 1843, 2970
BstACI	GRCGYC	2 cut(s)	29, 80
BstAFI	CTTAAG	2 cut(s)	1810, 2074
BstAPI	GCANNNNNTGC	2 cut(s)	1871, 2825
BstAUI	TGTACA	1 cut(s)	1105
BstBAI	YACGTR	1 cut(s)	2327
BstBI	TTCGAA	3 cut(s)	8, 463, 869
BstDSI	CCRYGG	2 cut(s)	1696, 1753
BstENI	CCTNNNNNAGG	2 cut(s)	504, 2494
BstFNI	CGCG	1 cut(s)	2697
BstH2I	RGCGCY	1 cut(s)	2653
BstHHI	GCGC	2 cut(s)	135, 2652
BstMAI	GTCTC	3 cut(s)	1172, 1506, 1982
BstNI	CCWGG	8 cut(s)	282, 402, 1281, 1620, 1727, 2301, 2646, 2994
BstNSI	RCATGY	1 cut(s)	2869
BstSCI	CCNGG	8 cut(s)	280, 400, 1279, 1618, 1725, 2299, 2644, 2992
BstUI	CGCG	1 cut(s)	2697
BstV2I	GAAGAC	3 cut(s)	75, 161, 1630
BstX2I	RGATCY	3 cut(s)	575, 1412, 1771
BstYI	RGATCY	3 cut(s)	575, 1412, 1771
Bsu15I	ATCGAT	1 cut(s)	2625
BsuI	GTATCC	1 cut(s)	2274
BsuRI	GGCC	7 cut(s)	997, 1588, 1618, 2184, 2227, 2269, 2614
BsuTUI	ATCGAT	1 cut(s)	2625
BtgI	CCRYGG	2 cut(s)	1696, 1753
BtgZI	GCGATG	1 cut(s)	175
BtsIMutI	CAGTG	4 cut(s)	288, 382, 1781, 2927
BtuMI	TCGCGA	1 cut(s)	2697
CaiI	CAGNNNCTG	1 cut(s)	2792
CfoI	GCGC	2 cut(s)	135, 2652
Cfr10I	RCCGGY	1 cut(s)	2610
Cfr13I	GGNCC	8 cut(s)	539, 1274, 1352, 1671, 2294, 2372, 2421, 2675
ClaI	ATCGAT	1 cut(s)	2625
CpoI	CGGWCCG	1 cut(s)	1671
CseI	GACGC	5 cut(s)	37, 69, 138, 964, 2252
Csp6I	GTAC	3 cut(s)	1106, 1652, 2262
CspI	CGGWCCG	1 cut(s)	1671
CviAII	CATG	8 cut(s)	1022, 1271, 1754, 1932, 2131, 2733, 2866, 3040
CviQI	GTAC	3 cut(s)	1106, 1652, 2262
DraI	TTTAAA	2 cut(s)	2754, 2877
DraIII	CACNNNGTG	1 cut(s)	2276
EaeI	YGGCCR	3 cut(s)	1616, 2182, 2612
Eam1104I	CTCTTC	4 cut(s)	117, 439, 1843, 2970
EarI	CTCTTC	4 cut(s)	117, 439, 1843, 2970
Ecl136II	GAGCTC	1 cut(s)	2560
Eco130I	CCWWGG	2 cut(s)	1254, 1753
Eco147I	AGGCCT	1 cut(s)	1588
Eco24I	GRGCYC	3 cut(s)	1605, 1966, 2562
Eco31I	GGTCTC	1 cut(s)	1172
Eco47I	GGWCC	8 cut(s)	539, 1274, 1352, 1671, 2294, 2372, 2421, 2675
Eco53kI	GAGCTC	1 cut(s)	2560
Eco57I	CTGAAG	3 cut(s)	631, 1941, 2361
Eco72I	CACGTG	1 cut(s)	2327
EcoICRI	GAGCTC	1 cut(s)	2560
EcoNI	CCTNNNNNAGG	2 cut(s)	504, 2494
EcoO109I	RGGNCCY	1 cut(s)	2421
EcoRI	GAATTC	2 cut(s)	709, 1222
EcoRII	CCWGG	8 cut(s)	280, 400, 1279, 1618, 1725, 2299, 2644, 2992
EcoT14I	CCWWGG	2 cut(s)	1254, 1753
EcoT38I	GRGCYC	3 cut(s)	1605, 1966, 2562
ErhI	CCWWGG	2 cut(s)	1254, 1753
FaeI	CATG	8 cut(s)	1025, 1274, 1757, 1935, 2134, 2736, 2869, 3043
FalI	AAGNNNNNCTT	4 cut(s)	111, 143, 1211, 1243
FaqI	GGGAC	2 cut(s)	1208, 2407
FatI	CATG	8 cut(s)	1021, 1270, 1753, 1931, 2130, 2732, 2865, 3039
FauI	CCCGC	2 cut(s)	1325, 1612
FbaI	TGATCA	3 cut(s)	553, 1032, 1825
FblI	GTMKAC	1 cut(s)	1053
FriOI	GRGCYC	3 cut(s)	1605, 1966, 2562
FspBI	CTAG	7 cut(s)	93, 305, 1397, 1419, 1842, 2000, 2124
GlaI	GCGC	2 cut(s)	134, 2651
GsuI	CTGGAG	1 cut(s)	1263
HaeII	RGCGCY	1 cut(s)	2653
HaeIII	GGCC	7 cut(s)	997, 1588, 1618, 2184, 2227, 2269, 2614
HapII	CCGG	4 cut(s)	77, 314, 770, 2611
HgaI	GACGC	5 cut(s)	37, 69, 138, 964, 2252
HhaI	GCGC	2 cut(s)	135, 2652
Hin1I	GRCGYC	2 cut(s)	29, 80
Hin1II	CATG	8 cut(s)	1025, 1274, 1757, 1935, 2134, 2736, 2869, 3043
Hin6I	GCGC	2 cut(s)	133, 2650
HinP1I	GCGC	2 cut(s)	133, 2650
HincII	GTYRAC	4 cut(s)	595, 639, 1333, 2164
HindII	GTYRAC	4 cut(s)	595, 639, 1333, 2164
HindIII	AAGCTT	1 cut(s)	334
HpaI	GTTAAC	2 cut(s)	595, 2164
HpaII	CCGG	4 cut(s)	77, 314, 770, 2611
HphI	GGTGA	5 cut(s)	768, 1391, 2152, 2206, 2411
Hpy166II	GTNNAC	6 cut(s)	595, 639, 1054, 1333, 1652, 2164
Hpy8I	GTNNAC	6 cut(s)	595, 639, 1054, 1333, 1652, 2164
HpyAV	CCTTC	5 cut(s)	15, 552, 655, 1121, 1478
HpyCH4III	ACNGT	9 cut(s)	292, 377, 427, 517, 1671, 1785, 1993, 2593, 2931
HpyCH4IV	ACGT	1 cut(s)	2326
HpySE526I	ACGT	1 cut(s)	2326
Hsp92I	GRCGYC	2 cut(s)	29, 80
Hsp92II	CATG	8 cut(s)	1025, 1274, 1757, 1935, 2134, 2736, 2869, 3043
HspAI	GCGC	2 cut(s)	133, 2650
Kpn2I	TCCGGA	1 cut(s)	313
Ksp22I	TGATCA	3 cut(s)	553, 1032, 1825
KspAI	GTTAAC	2 cut(s)	595, 2164
LguI	GCTCTTC	1 cut(s)	117
LmnI	GCTCC	4 cut(s)	290, 1474, 2557, 2789
MaeI	CTAG	7 cut(s)	93, 305, 1397, 1419, 1842, 2000, 2124
MaeII	ACGT	1 cut(s)	2326
MaeIII	GTNAC	3 cut(s)	657, 2587, 2983
MflI	RGATCY	3 cut(s)	575, 1412, 1771
MhlI	GDGCHC	3 cut(s)	1605, 1966, 2562
MlsI	TGGCCA	1 cut(s)	2184
MluNI	TGGCCA	1 cut(s)	2184
MlyI	GAGTC	4 cut(s)	634, 785, 1886, 2851
MmeI	TCCRAC	3 cut(s)	1035, 2062, 2653
Mox20I	TGGCCA	1 cut(s)	2184
MroI	TCCGGA	1 cut(s)	313
MscI	TGGCCA	1 cut(s)	2184
MslI	CAYNNNNRTG	3 cut(s)	1326, 1930, 2806
Msp20I	TGGCCA	1 cut(s)	2184
MspA1I	CMGCKG	2 cut(s)	814, 1436
MspCI	CTTAAG	2 cut(s)	1810, 2074
MspI	CCGG	4 cut(s)	77, 314, 770, 2611
MspR9I	CCNGG	8 cut(s)	282, 402, 1281, 1620, 1727, 2301, 2646, 2994
Mva1269I	GAATGC	3 cut(s)	676, 1708, 2246
MvaI	CCWGG	8 cut(s)	282, 402, 1281, 1620, 1727, 2301, 2646, 2994
MvnI	CGCG	1 cut(s)	2697
NcoI	CCATGG	1 cut(s)	1753
NheI	GCTAGC	1 cut(s)	1418
NlaIII	CATG	8 cut(s)	1025, 1274, 1757, 1935, 2134, 2736, 2869, 3043
NlaIV	GGNNCC	4 cut(s)	54, 286, 2154, 2423
NruI	TCGCGA	1 cut(s)	2697
NspI	RCATGY	1 cut(s)	2869
NspV	TTCGAA	3 cut(s)	8, 463, 869
PaeI	GCATGC	1 cut(s)	2869
PceI	AGGCCT	1 cut(s)	1588
PciSI	GCTCTTC	1 cut(s)	117
PctI	GAATGC	3 cut(s)	676, 1708, 2246
PfeI	GAWTC	8 cut(s)	107, 218, 475, 1205, 1919, 2402, 2627, 2911
PflMI	CCANNNNNTGG	2 cut(s)	1375, 2276
PfoI	TCCNGGA	1 cut(s)	2299
PleI	GAGTC	4 cut(s)	634, 785, 1885, 2850
PmaCI	CACGTG	1 cut(s)	2327
PmlI	CACGTG	1 cut(s)	2327
PpsI	GAGTC	4 cut(s)	634, 785, 1885, 2850
Ppu21I	YACGTR	1 cut(s)	2327
PpuMI	RGGWCCY	1 cut(s)	2421
PsiI	TTATAA	1 cut(s)	1364
Psp124BI	GAGCTC	1 cut(s)	2562
Psp5II	RGGWCCY	1 cut(s)	2421
Psp6I	CCWGG	8 cut(s)	280, 400, 1279, 1618, 1725, 2299, 2644, 2992
PspCI	CACGTG	1 cut(s)	2327
PspGI	CCWGG	8 cut(s)	280, 400, 1279, 1618, 1725, 2299, 2644, 2992
PspN4I	GGNNCC	4 cut(s)	54, 286, 2154, 2423
PspPI	GGNCC	8 cut(s)	539, 1274, 1352, 1671, 2294, 2372, 2421, 2675
PspPPI	RGGWCCY	1 cut(s)	2421
PstNI	CAGNNNCTG	1 cut(s)	2792
PsuI	RGATCY	3 cut(s)	575, 1412, 1771
PvuII	CAGCTG	1 cut(s)	1436
RruI	TCGCGA	1 cut(s)	2697
RsaI	GTAC	3 cut(s)	1107, 1653, 2263
RsaNI	GTAC	3 cut(s)	1106, 1652, 2262
RseI	CAYNNNNRTG	3 cut(s)	1326, 1930, 2806
Rsr2I	CGGWCCG	1 cut(s)	1671
RsrII	CGGWCCG	1 cut(s)	1671
SacI	GAGCTC	1 cut(s)	2562
SapI	GCTCTTC	1 cut(s)	117
Sau96I	GGNCC	8 cut(s)	539, 1274, 1352, 1671, 2294, 2372, 2421, 2675
SchI	GAGTC	4 cut(s)	634, 785, 1886, 2851
ScrFI	CCNGG	8 cut(s)	282, 402, 1281, 1620, 1727, 2301, 2646, 2994
SduI	GDGCHC	3 cut(s)	1605, 1966, 2562
SfuI	TTCGAA	3 cut(s)	8, 463, 869
SinI	GGWCC	8 cut(s)	539, 1274, 1352, 1671, 2294, 2372, 2421, 2675
SmiMI	CAYNNNNRTG	3 cut(s)	1326, 1930, 2806
SmlI	CTYRAG	3 cut(s)	1810, 2074, 2834
SmoI	CTYRAG	3 cut(s)	1810, 2074, 2834
SpeI	ACTAGT	1 cut(s)	92
SphI	GCATGC	1 cut(s)	2869
SseBI	AGGCCT	1 cut(s)	1588
SsiI	CCGC	9 cut(s)	56, 537, 814, 1318, 1605, 1705, 1816, 2006, 3052
SspMI	CTAG	7 cut(s)	93, 305, 1397, 1419, 1842, 2000, 2124
SstI	GAGCTC	1 cut(s)	2562
StuI	AGGCCT	1 cut(s)	1588
StyD4I	CCNGG	8 cut(s)	280, 400, 1279, 1618, 1725, 2299, 2644, 2992
StyI	CCWWGG	2 cut(s)	1254, 1753
TaaI	ACNGT	9 cut(s)	292, 377, 427, 517, 1671, 1785, 1993, 2593, 2931
TaiI	ACGT	1 cut(s)	2329
TatI	WGTACW	1 cut(s)	1105
TauI	GCSGC	3 cut(s)	1708, 1819, 3054
TfiI	GAWTC	8 cut(s)	107, 218, 475, 1205, 1919, 2402, 2627, 2911
TscAI	CASTG	4 cut(s)	295, 382, 1788, 2934
TspDTI	ATGAA	9 cut(s)	411, 459, 810, 876, 1140, 1259, 1435, 1962, 2700
TspGWI	ACGGA	3 cut(s)	714, 1568, 1685
TspRI	CASTG	4 cut(s)	295, 382, 1788, 2934
Van91I	CCANNNNNTGG	2 cut(s)	1375, 2276
Vha464I	CTTAAG	2 cut(s)	1810, 2074
VpaK11BI	GGWCC	8 cut(s)	539, 1274, 1352, 1671, 2294, 2372, 2421, 2675
XagI	CCTNNNNNAGG	2 cut(s)	504, 2494
XapI	RAATTY	8 cut(s)	465, 709, 931, 1086, 1222, 1528, 2353, 2939
XbaI	TCTAGA	1 cut(s)	1396
XceI	RCATGY	1 cut(s)	2869
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1760
XmiI	GTMKAC	1 cut(s)	1053
XspI	CTAG	7 cut(s)	93, 305, 1397, 1419, 1842, 2000, 2124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.