Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0006784

Physical Location & Seq

Genomic Coordinates Forward (+)

68539774 .. 68542984

Gene Structure 3211 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG452300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGGTATTCATTGATGAGTTGGATGCAATTGCACCTGCAAGGAAAGAGGGAGGTGAAGAGCTATCTCTGAGAATGGTTGCTACACTGCTGAATTTGATGGATGGGATTAGTACAACTGAAAGAGTACTTGTAATTGCTGCTACCAACAGGCCTGATAGTATTGAGCCTGCACTCAGACGACCTGGAAGACTTGACAGGGAAATTGAAATAGGAGTGCCGTCTCCCAAGCAACGGCTTGAGATTCTAGATGTTCTTGTTGGTGAAATGGAGCACTGTCTTTCAGATGTGCAAGTCCAACAACTTGCTAATGCTACACATGGTTTCATAGGCTCTGATCTAGCTGCCCTTTGCAACGAGGCAGCCTTCAGTTCTCTTAGGCGTTATGTCAATTCTAGATATCCTCATGATTATTTGCATAGAACATCTAGTACTTATGAAGATTGTTCCAACAGTCTAATGGTACCTGATTGCTTAGAAGATACAACAGACATGTCAAGGGATTACTCAGATACTGCATCTTCATCTATCACACATTTGGCGTTTTCTTCAGAGAATTGTTTGTCTGTGCATTTGAAGGGAACAAATCAAGATGATGATATTGAAGAAGAATTAAAAGTGGCTTTTAAAGATTTTGAAAGTGCCAGGATGAAAGTGAGGCCCAGTGCTATGCGAGAGGTAATCGTTGAGGTCCCGAAGGTTAATTGGGAAGATGTTGGTGGTCAGACGGAGGTGAAGAATCAATTGATAGAAGCTGTAATGTGGCCCCAAAAGCACCAGGACGAATTCAAGCGTATAGGGATTTCTGCCCCAACAGGGGTCCTCATGTTTGGTCCTCCTGGTTGCAGCAAAACCCTCATGGCTCGTGCTGTAGCTTCTGAGGCACGGCTGAATTTCCTTTCTGTGAAGGGTCCAGAACTTTATAGCAAATGGGTTGGTGAATCTGAGAAGGCTGTGAGATCAGTGTTCGCAAAGGCAAGGGCTAATGCTCCAGCAATCATTTTCTTTGATGAAATTGACGGTCTTGCTGCCATTCGTGGGAAGGAAAATGATGGAGTTTCTGTTTCAGATAGGGTCATAAGTCAACTTCTTGTCGAAATGGATGGTTTGCCAGAAAGAGTTGATGTCACTGTTATTGCTGCTACAAATCGGCCGGACAAGATTGATAGTGCGCTTCTAAGACCAGGGCGCTTTGATCGCTTGCTATATGTGGGACCTCCAGATGAGACTGATCGTGAAGAGATATTCCGTATCCATTTGAACAATATGAAATGCAGCTATATCAACAGACGTGATCTTGCTCGTCAGACCGCAGGCTATACAGGTGCTGATATTAGATTAATCTGTCGGGAAGCAGGTCTTGCAGCTATTGAGGAGAGCTTATGCCGTAAGGAGAGCCTTGATGGCTTAGAAATCAAAATGCAACATTTAGAGACTGCGATTAGACAAGTGAAGCCAACAAAAACTCAATTTTATCAAGAGCTATCAGGAAAGTTTCAAAGACTCGTTATTTCTAATATAAACCCAGGGAATTCATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

AAA

Protein Analysis

512

Amino Acids

57.0

Weight (kDa)

5.23

Isoelectric Point (pI)

41.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	2 - 71	3.4e-18	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	95 - 131	5.8e-11	AAA+ lid domain
AAA	PF00004	273 - 404	1e-41	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	430 - 460	3.3e-11	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56690
fragaria_vesca	FvH4_6g32040 FvH4_6g32040 FvH4_6g32040 FvH4_6g32040 FvH4_6g32040
malus_domestica	MD09G1206200.v1.1
prunus_persica	Prupe.3G062600_v2.0.a1 Prupe.3G062600_v2.0.a1 Prupe.3G062600_v2.0.a1 Prupe.3G062600_v2.0.a1 Prupe.3G062600_v2.0.a1
pyrus_communis	pycom09g12300
rosa_chinensis	RchiOBHm_Chr2g0139701
rosa_laevigata	RLG00000019827
rosa_multiflora	Rmu_co8172878.1_g000001 Rmu_sc0009714.1_g000008
rosa_roxburghii	Rroxscaffold_2G00105270
rosa_rugosa	Rorug02G0359300 Rorug04G0364300 Rorug04G0364400
rosa_samantha	Rh2AG397600 Rh2AG409100 Rh2BG419400 Rh4CG452300
rosa_wichuraiana	Rw2G033460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	43
Acc36I	ACCTGC	2 cut(s)	43, 1343
Acc65I	GGTACC	1 cut(s)	460
AccB1I	GGYRCC	1 cut(s)	460
AciI	CCGC	1 cut(s)	1308
AcoI	YGGCCR	1 cut(s)	1148
AcsI	RAATTY	4 cut(s)	91, 782, 889, 1528
AcuI	CTGAAG	2 cut(s)	349, 531
AfaI	GTAC	4 cut(s)	112, 126, 430, 462
AfiI	CCNNNNNNNGG	4 cut(s)	231, 813, 814, 1035
AflIII	ACRYGT	1 cut(s)	489
AgsI	TTSAA	7 cut(s)	206, 574, 602, 635, 787, 1258, 1496
AjiI	CACGTC	1 cut(s)	1289
AjnI	CCWGG	6 cut(s)	181, 641, 774, 835, 1180, 1522
AluBI	AGCT	8 cut(s)	61, 341, 752, 872, 1275, 1364, 1377, 1480
AluI	AGCT	8 cut(s)	61, 341, 752, 872, 1275, 1364, 1377, 1480
Alw21I	GWGCWC	1 cut(s)	273
Alw26I	GTCTC	3 cut(s)	225, 1217, 1424
AlwNI	CAGNNNCTG	2 cut(s)	512, 1325
AoxI	GGCC	4 cut(s)	149, 656, 761, 1148
ApeKI	GCWGC	8 cut(s)	137, 341, 359, 843, 1025, 1136, 1272, 1361
ApoI	RAATTY	4 cut(s)	91, 782, 889, 1528
AseI	ATTAAT	1 cut(s)	1337
Asp718I	GGTACC	1 cut(s)	460
AspLEI	GCGC	2 cut(s)	1171, 1188
AspS9I	GGNCC	7 cut(s)	657, 688, 762, 817, 830, 908, 1211
AsuHPI	GGTGA	4 cut(s)	65, 272, 742, 947
AvaII	GGWCC	5 cut(s)	688, 817, 830, 908, 1211
BanI	GGYRCC	1 cut(s)	460
BauI	CACGAG	1 cut(s)	861
BbsI	GAAGAC	1 cut(s)	193
Bbv12I	GWGCWC	1 cut(s)	273
BbvI	GCAGC	8 cut(s)	124, 328, 371, 855, 1012, 1123, 1284, 1373
BccI	CCATC	5 cut(s)	91, 95, 1043, 1094, 1394
BceAI	ACGGC	4 cut(s)	202, 248, 899, 1368
BciT130I	CCWGG	6 cut(s)	183, 643, 776, 837, 1182, 1524
BciVI	GTATCC	1 cut(s)	1259
BcoDI	GTCTC	3 cut(s)	225, 1217, 1424
BfaI	CTAG	4 cut(s)	245, 338, 393, 426
BfmI	CTRYAG	1 cut(s)	867
BfoI	RGCGCY	1 cut(s)	1189
BfuAI	ACCTGC	2 cut(s)	43, 1343
BfuI	GTATCC	1 cut(s)	1259
BglI	GCCNNNNNGGC	1 cut(s)	1401
BisI	GCNGC	8 cut(s)	138, 342, 360, 844, 1026, 1137, 1273, 1362
BlsI	GCNGC	8 cut(s)	139, 343, 361, 845, 1027, 1138, 1274, 1363
BmcAI	AGTACT	2 cut(s)	126, 430
Bme1390I	CCNGG	6 cut(s)	183, 643, 776, 837, 1182, 1524
Bme18I	GGWCC	5 cut(s)	688, 817, 830, 908, 1211
BmgBI	CACGTC	1 cut(s)	1289
BmgT120I	GGNCC	7 cut(s)	657, 688, 762, 817, 830, 908, 1211
BmiI	GGNNCC	6 cut(s)	462, 690, 764, 818, 909, 1212
BmrFI	CCNGG	6 cut(s)	183, 643, 776, 837, 1182, 1524
BmrI	ACTGGG	1 cut(s)	654
BmsI	GCATC	2 cut(s)	13, 524
BmuI	ACTGGG	1 cut(s)	654
BpiI	GAAGAC	1 cut(s)	193
BpmI	CTGGAG	2 cut(s)	972, 1200
BpuEI	CTTGAG	1 cut(s)	257
BsaJI	CCNNGG	3 cut(s)	1181, 1522, 1523
BsaXI	ACNNNNNCTCC	2 cut(s)	1044, 1074
Bsc4I	CCNNNNNNNGG	4 cut(s)	231, 813, 814, 1035
Bse1I	ACTGG	1 cut(s)	660
BseBI	CCWGG	6 cut(s)	183, 643, 776, 837, 1182, 1524
BseDI	CCNNGG	3 cut(s)	1181, 1522, 1523
BseGI	GGATG	4 cut(s)	28, 106, 651, 1105
BseLI	CCNNNNNNNGG	4 cut(s)	231, 813, 814, 1035
BseMII	CTCAG	5 cut(s)	59, 187, 519, 867, 933
BseNI	ACTGG	1 cut(s)	660
BseRI	GAGGAG	1 cut(s)	1385
BseX3I	CGGCCG	1 cut(s)	1148
BseXI	GCAGC	8 cut(s)	124, 328, 371, 855, 1012, 1123, 1284, 1373
BsgI	GTGCAG	1 cut(s)	153
Bsh1285I	CGRYCG	1 cut(s)	1151
BshFI	GGCC	4 cut(s)	151, 658, 763, 1150
BshNI	GGYRCC	1 cut(s)	460
BsiEI	CGRYCG	1 cut(s)	1151
BsiHKAI	GWGCWC	1 cut(s)	273
BsiSI	CCGG	1 cut(s)	1151
BslFI	GGGAC	2 cut(s)	674, 1224
BslI	CCNNNNNNNGG	4 cut(s)	231, 813, 814, 1035
BsmAI	GTCTC	3 cut(s)	225, 1217, 1424
BsmBI	CGTCTC	1 cut(s)	225
BsmFI	GGGAC	2 cut(s)	674, 1224
BsnI	GGCC	4 cut(s)	151, 658, 763, 1150
Bsp1286I	GDGCHC	1 cut(s)	273
Bsp143I	GATC	5 cut(s)	334, 956, 1192, 1228, 1291
BspACI	CCGC	1 cut(s)	1308
BspANI	GGCC	4 cut(s)	151, 658, 763, 1150
BspCNI	CTCAG	5 cut(s)	60, 186, 518, 868, 934
BspHI	TCATGA	1 cut(s)	403
BspLI	GGNNCC	6 cut(s)	462, 690, 764, 818, 909, 1212
BspMI	ACCTGC	2 cut(s)	43, 1343
BspQI	GCTCTTC	1 cut(s)	51
BspT107I	GGYRCC	1 cut(s)	460
BsrI	ACTGG	1 cut(s)	660
BssECI	CCNNGG	3 cut(s)	1181, 1522, 1523
BssMI	GATC	5 cut(s)	334, 956, 1192, 1228, 1291
BssSI	CACGAG	1 cut(s)	861
Bst2BI	CACGAG	1 cut(s)	861
Bst2UI	CCWGG	6 cut(s)	183, 643, 776, 837, 1182, 1524
Bst4CI	ACNGT	4 cut(s)	275, 452, 1019, 1129
Bst6I	CTCTTC	2 cut(s)	51, 1230
BstAPI	GCANNNNNTGC	1 cut(s)	1358
BstC8I	GCNNGC	3 cut(s)	168, 1199, 1312
BstDEI	CTNAG	9 cut(s)	68, 173, 374, 472, 505, 876, 942, 1175, 1405
BstF5I	GGATG	4 cut(s)	28, 106, 651, 1105
BstH2I	RGCGCY	1 cut(s)	1189
BstHHI	GCGC	2 cut(s)	1171, 1188
BstKTI	GATC	5 cut(s)	337, 959, 1195, 1231, 1294
BstMAI	GTCTC	3 cut(s)	225, 1217, 1424
BstMBI	GATC	5 cut(s)	334, 956, 1192, 1228, 1291
BstMCI	CGRYCG	1 cut(s)	1151
BstMWI	GCNNNNNNNGC	5 cut(s)	769, 878, 1194, 1358, 1401
BstNI	CCWGG	6 cut(s)	183, 643, 776, 837, 1182, 1524
BstNSI	RCATGY	1 cut(s)	493
BstSCI	CCNGG	6 cut(s)	181, 641, 774, 835, 1180, 1522
BstSFI	CTRYAG	1 cut(s)	867
BstV1I	GCAGC	8 cut(s)	124, 328, 371, 855, 1012, 1123, 1284, 1373
BstV2I	GAAGAC	1 cut(s)	193
BstZI	CGGCCG	1 cut(s)	1148
BsuI	GTATCC	1 cut(s)	1259
BsuRI	GGCC	4 cut(s)	151, 658, 763, 1150
BtrI	CACGTC	1 cut(s)	1289
BtsCI	GGATG	4 cut(s)	28, 106, 651, 1105
BtsI	GCAGTG	1 cut(s)	83
BtsIMutI	CAGTG	5 cut(s)	83, 271, 667, 966, 1125
BveI	ACCTGC	2 cut(s)	43, 1343
Cac8I	GCNNGC	3 cut(s)	168, 1199, 1312
CaiI	CAGNNNCTG	2 cut(s)	512, 1325
CciI	TCATGA	1 cut(s)	403
CfoI	GCGC	2 cut(s)	1171, 1188
Cfr13I	GGNCC	7 cut(s)	657, 688, 762, 817, 830, 908, 1211
Csp6I	GTAC	4 cut(s)	111, 125, 429, 461
CviAII	CATG	5 cut(s)	317, 404, 490, 823, 856
CviQI	GTAC	4 cut(s)	111, 125, 429, 461
DdeI	CTNAG	9 cut(s)	68, 173, 374, 472, 505, 876, 942, 1175, 1405
DpnI	GATC	5 cut(s)	336, 958, 1194, 1230, 1293
DpnII	GATC	5 cut(s)	334, 956, 1192, 1228, 1291
DraI	TTTAAA	1 cut(s)	625
EaeI	YGGCCR	1 cut(s)	1148
EagI	CGGCCG	1 cut(s)	1148
Eam1104I	CTCTTC	2 cut(s)	51, 1230
EarI	CTCTTC	2 cut(s)	51, 1230
EclXI	CGGCCG	1 cut(s)	1148
Eco147I	AGGCCT	1 cut(s)	151
Eco32I	GATATC	1 cut(s)	398
Eco47I	GGWCC	5 cut(s)	688, 817, 830, 908, 1211
Eco52I	CGGCCG	1 cut(s)	1148
Eco57I	CTGAAG	2 cut(s)	349, 531
EcoO109I	RGGNCCY	3 cut(s)	688, 817, 1211
EcoRI	GAATTC	2 cut(s)	782, 1528
EcoRII	CCWGG	6 cut(s)	181, 641, 774, 835, 1180, 1522
EcoRV	GATATC	1 cut(s)	398
Esp3I	CGTCTC	1 cut(s)	225
FaeI	CATG	5 cut(s)	320, 407, 493, 826, 859
FalI	AAGNNNNNCTT	2 cut(s)	1341, 1373
FaqI	GGGAC	2 cut(s)	674, 1224
FatI	CATG	5 cut(s)	316, 403, 489, 822, 855
Fnu4HI	GCNGC	8 cut(s)	138, 342, 360, 844, 1026, 1137, 1273, 1362
FokI	GGATG	4 cut(s)	35, 113, 658, 1112
Fsp4HI	GCNGC	8 cut(s)	138, 342, 360, 844, 1026, 1137, 1273, 1362
FspBI	CTAG	4 cut(s)	245, 338, 393, 426
GlaI	GCGC	2 cut(s)	1170, 1187
GluI	GCNGC	8 cut(s)	138, 342, 360, 844, 1026, 1137, 1273, 1362
GsuI	CTGGAG	2 cut(s)	972, 1200
HaeII	RGCGCY	1 cut(s)	1189
HaeIII	GGCC	4 cut(s)	151, 658, 763, 1150
HapII	CCGG	1 cut(s)	1151
HhaI	GCGC	2 cut(s)	1171, 1188
Hin1II	CATG	5 cut(s)	320, 407, 493, 826, 859
Hin6I	GCGC	2 cut(s)	1169, 1186
HinP1I	GCGC	2 cut(s)	1169, 1186
HincII	GTYRAC	1 cut(s)	1082
HindII	GTYRAC	1 cut(s)	1082
HinfI	GANTC	4 cut(s)	241, 736, 938, 1500
HpaII	CCGG	1 cut(s)	1151
HphI	GGTGA	4 cut(s)	65, 272, 742, 947
Hpy166II	GTNNAC	1 cut(s)	1082
Hpy8I	GTNNAC	1 cut(s)	1082
HpyAV	CCTTC	6 cut(s)	373, 568, 688, 898, 940, 1033
HpyCH4III	ACNGT	4 cut(s)	275, 452, 1019, 1129
HpyCH4IV	ACGT	1 cut(s)	1288
HpyF10VI	GCNNNNNNNGC	5 cut(s)	769, 878, 1194, 1358, 1401
HpyF3I	CTNAG	9 cut(s)	68, 173, 374, 472, 505, 876, 942, 1175, 1405
HpySE526I	ACGT	1 cut(s)	1288
Hsp92II	CATG	5 cut(s)	320, 407, 493, 826, 859
HspAI	GCGC	2 cut(s)	1169, 1186
KpnI	GGTACC	1 cut(s)	464
Kzo9I	GATC	5 cut(s)	334, 956, 1192, 1228, 1291
LguI	GCTCTTC	1 cut(s)	51
LmnI	GCTCC	2 cut(s)	268, 991
Lsp1109I	GCAGC	8 cut(s)	124, 328, 371, 855, 1012, 1123, 1284, 1373
LweI	GCATC	2 cut(s)	13, 524
MaeI	CTAG	4 cut(s)	245, 338, 393, 426
MaeII	ACGT	1 cut(s)	1288
MaeIII	GTNAC	1 cut(s)	1123
MalI	GATC	5 cut(s)	336, 958, 1194, 1230, 1293
MboI	GATC	5 cut(s)	334, 956, 1192, 1228, 1291
MfeI	CAATTG	2 cut(s)	27, 740
MhlI	GDGCHC	1 cut(s)	273
MlyI	GAGTC	1 cut(s)	1494
MmeI	TCCRAC	2 cut(s)	319, 471
MseI	TTAA	4 cut(s)	611, 624, 699, 1337
MspI	CCGG	1 cut(s)	1151
MspR9I	CCNGG	6 cut(s)	183, 643, 776, 837, 1182, 1524
MunI	CAATTG	2 cut(s)	27, 740
MvaI	CCWGG	6 cut(s)	183, 643, 776, 837, 1182, 1524
MwoI	GCNNNNNNNGC	5 cut(s)	769, 878, 1194, 1358, 1401
NdeII	GATC	5 cut(s)	334, 956, 1192, 1228, 1291
NlaIII	CATG	5 cut(s)	320, 407, 493, 826, 859
NlaIV	GGNNCC	6 cut(s)	462, 690, 764, 818, 909, 1212
NmuCI	GTSAC	1 cut(s)	1123
NspI	RCATGY	1 cut(s)	493
PagI	TCATGA	1 cut(s)	403
PaqCI	CACCTGC	1 cut(s)	43
PasI	CCCWGGG	1 cut(s)	1523
PceI	AGGCCT	1 cut(s)	151
PciI	ACATGT	1 cut(s)	489
PciSI	GCTCTTC	1 cut(s)	51
PfeI	GAWTC	3 cut(s)	241, 736, 938
PkrI	GCNGC	8 cut(s)	139, 343, 361, 845, 1027, 1138, 1274, 1363
PleI	GAGTC	1 cut(s)	1494
PpsI	GAGTC	1 cut(s)	1494
PpuMI	RGGWCCY	3 cut(s)	688, 817, 1211
PscI	ACATGT	1 cut(s)	489
PshBI	ATTAAT	1 cut(s)	1337
Psp5II	RGGWCCY	3 cut(s)	688, 817, 1211
Psp6I	CCWGG	6 cut(s)	181, 641, 774, 835, 1180, 1522
PspGI	CCWGG	6 cut(s)	181, 641, 774, 835, 1180, 1522
PspN4I	GGNNCC	6 cut(s)	462, 690, 764, 818, 909, 1212
PspPI	GGNCC	7 cut(s)	657, 688, 762, 817, 830, 908, 1211
PspPPI	RGGWCCY	3 cut(s)	688, 817, 1211
PsrI	GAACNNNNNNTAC	2 cut(s)	412, 444
PstNI	CAGNNNCTG	2 cut(s)	512, 1325
RsaI	GTAC	4 cut(s)	112, 126, 430, 462
RsaNI	GTAC	4 cut(s)	111, 125, 429, 461
SapI	GCTCTTC	1 cut(s)	51
SaqAI	TTAA	4 cut(s)	611, 624, 699, 1337
SatI	GCNGC	8 cut(s)	138, 342, 360, 844, 1026, 1137, 1273, 1362
Sau3AI	GATC	5 cut(s)	334, 956, 1192, 1228, 1291
Sau96I	GGNCC	7 cut(s)	657, 688, 762, 817, 830, 908, 1211
ScaI	AGTACT	2 cut(s)	126, 430
SchI	GAGTC	1 cut(s)	1494
ScrFI	CCNGG	6 cut(s)	183, 643, 776, 837, 1182, 1524
SduI	GDGCHC	1 cut(s)	273
SfaNI	GCATC	2 cut(s)	13, 524
SfcI	CTRYAG	1 cut(s)	867
SinI	GGWCC	5 cut(s)	688, 817, 830, 908, 1211
SmlI	CTYRAG	1 cut(s)	236
SmoI	CTYRAG	1 cut(s)	236
SseBI	AGGCCT	1 cut(s)	151
SsiI	CCGC	1 cut(s)	1308
SspMI	CTAG	4 cut(s)	245, 338, 393, 426
StuI	AGGCCT	1 cut(s)	151
StyD4I	CCNGG	6 cut(s)	181, 641, 774, 835, 1180, 1522
TaaI	ACNGT	4 cut(s)	275, 452, 1019, 1129
TaiI	ACGT	1 cut(s)	1291
TaqI	TCGA	1 cut(s)	1092
TatI	WGTACW	3 cut(s)	110, 124, 428
TfiI	GAWTC	3 cut(s)	241, 736, 938
Tru1I	TTAA	4 cut(s)	611, 624, 699, 1337
Tru9I	TTAA	4 cut(s)	611, 624, 699, 1337
TscAI	CASTG	5 cut(s)	90, 278, 667, 966, 1132
TseFI	GTSAC	1 cut(s)	1123
TseI	GCWGC	8 cut(s)	137, 341, 359, 843, 1025, 1136, 1272, 1361
Tsp45I	GTSAC	1 cut(s)	1123
TspDTI	ATGAA	7 cut(s)	313, 450, 510, 662, 1023, 1280, 1521
TspGWI	ACGGA	2 cut(s)	740, 1235
TspRI	CASTG	5 cut(s)	90, 278, 667, 966, 1132
VpaK11BI	GGWCC	5 cut(s)	688, 817, 830, 908, 1211
VspI	ATTAAT	1 cut(s)	1337
XapI	RAATTY	4 cut(s)	91, 782, 889, 1528
XbaI	TCTAGA	2 cut(s)	244, 392
XceI	RCATGY	1 cut(s)	493
XcmI	CCANNNNNNNNNTGG	1 cut(s)	454
XspI	CTAG	4 cut(s)	245, 338, 393, 426
ZrmI	AGTACT	2 cut(s)	126, 430

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.