Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006784

Physical Location & Seq

Genomic Coordinates Reverse (-)

25145348 .. 25152208

Gene Structure 6861 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g32040.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3012 bp

ATGCCTTCAAAGGGCAAGAAGAACTCAAAGCCCCAATCGAGGCTGTCCAACTCTGACAGCTTTGCTTCTTCTGGGTCTCTCGATTTCGAACCCAATGAAGTCAATTTTGCCTCCTGTCTTGAACAAGCTTCCACCAAATACCCATCTCTCATTGCCAAATCTGCCTTCATTGCCCAACTCACCGATGTCGATGACTCCCCCAAAGGCTGTAAAGTTTGGCTTTCTGAGCCTTCCATGGTTTCCCATTCCTTCACTCCTGGCTCCATTGTTTCGGTTTCGCTACCGTGTTTGAAGAGTAGATATTCGGAGAGTTTTCCTCTCAGCACATTAGCAGATGAATGTGCTAGACGTTTCGGGGTTGGGGCTTGCCAACAGTTGGATCACGATGAACCAGGGAACTACTTTGCTCTTGCAACTATATTTCCGTCTGCTAAGGTTTTAAAGAATGGGGTACGGTTGTCATCAAATCTTTCAAACACCATGGGTTGTCTTGCATCAGGCAGGACCATATTTATCCATTCCATACAAAATACAGTCCGAGCTGGTCTTTTCAGTGGTACAGAAAAACCACGAAGTACCAAAGATTGCCTCTTAGTGTCCGATTGTAAAGAGTTAAATTTGGAGCTAGTCCATTCCAACCGTAGATTGACTATGAACAGTACCTCTACAAACCTATCTGCTGAAAAATCATTATACCAGCCTGAGAATGGAGTGCTTGCGTCCCCTAAGACACCATTGAATCGATCGAAACTTAGCTATTCTAATAGCAGCCCATTAGCTTCAGCTCGACGTGAGGAGTCAGCATCAAGTGTAATCACTCCGGATGAGTCATTTGTTGAACCTTTTGATGTTGAAGAGGTGTTTGGGGATGACACGTCAAAAAGACTTCTTCAGACGTGTGCTACTACATGGTTGTATTCTCGTTGTTTACTTCGTGGAAATCTGGTGACTATTCCTGTACTTTCACAGCATTGTTTACTTCGAGTCATTGGTGCTAAGAAGTTATCAGATGATAAAGCTAATCGTGATTTGCTTCATGAGTCCTCTGAGTTAGTGGACGAAGTAAATGATGCTTTTCTAGTGAAGCGGGAGACAAAAGTGTGCTTTCATTTGCCATCAAACCTGGAATCTAAAAGAAGAGATCTTTCTACAGTGCAATACAAGGATGCTATAGCTAATACAGGAGATGAATTATCAGGATTGGGTGGTCTGTCAAAAGAATATGCAGTTTTGAAGGACATCATAATATCATCATCTATGGACACCTTGTCACGTCTTGGTTTACGACCTACAAAGGGAGTGCTTCTTCATGGTCCACCTGGTACGGGAAAGACTTCTTTGGCTCGATTATGTGCCCGTGATGCTGGTGTCAACTTTTTCTCTGTCAATGGACCTGAAGTTGTGAGTCAGTACTATGGAAAAAGTGAGCAAGCTCTACGTGAAGTTTTTGACTCAGCTAGCCAAGCTGCACCTTCTGTGGTATTCATTGATGAGTTGGATGCAATTGCACCTGCAAGGAAAGAGGGAGGTGAAGAGCTATCCCTGAGAATGGTTGCTACACTGCTGAATTTGATGGATGGGATTACTACAACTGAAAGAGTACTTGTAATTGCTGCTACCAACAAGCCTGATAGTATTGAACCTGCACTCAGACGACCTGGAAGACTTGACAGGGAAATTGAACTAGGGGTGCCATCTCCCAAGCAACGGCTTGAGATTCTACATGTTCTTGTCGGTGAAATGGAGCACTTTCTTTCAGATGTGCAAGTCCAACAACTTGCTAATGCTACACATGGTTTTGTAGGCTCTGATCTAGCTGCCCTTTGCAACGAGGCAGCTTTCAGTTCTCTTAGGCGTTATGTCAGTTGTAGATACCCACATGATTATTTGCACAGAGCATCCAGTACTTATGAAGATTGTTCTAACAGTCTAATGACTTCTGATTGCTTAGAAGCTTCAACAGACATGTCAAAGGATTACTCAGATACCACATCTTCATCTATCACACACTTAGCGTTTACTTTAGAGAATTGTTTGTCTCTGCATTCTAAAGGAACAAATCAAGATGATGATGAAGAAGAATTAAAAGTGGCCTTTGAAGATTTTGAAAGTGCCAGGATGAAAGTGAGACCTAGTGCTATGCGAGAGGTAATCGTTGAAGTCCCAAAGGTTAATTGGGAAGATGTTGGTGGTCAAACGGAGGTGAAGAATCAATTGATAGAAGCTGTAATGTGGCCCCAAATGCACCAAGACGAATTCAAGCGTATAGGGATTTCTCCCCCCACAGGGGTCCTTATGTTTGGTCCTCCTGGTTGCAGCAAAACCCTCATGGCTCGGGCAGTAGCTTCTGAGGCACACCTCAATTTCCTTTCTGTGAAGGGTCCAGAACTTTATAGCAAATGGGTTGGCGAATCTGAGAAGGCTGTGAGATCAGTGTTCGCAAAGGCAAGGGCTAATGCCCCAGCAATCATATTCTTTGATGAAATTGACGGTCTTGCTGCCATTCGTGGGAAGGAAAATGATGGAGTTTCTGTTTCAGATAGGGTCATAAGTCAACTTCTTGTCGAAATGGATGGTTTGCAAGAAAGAGTTGATGTCACTGTTATTGCGGCTACAAATAGGCCCGACAAGATTGATAGTGCGCTTCTAAGACCAGGACGCTTTGATCGGTTGCTATATGTGGGACCCCCGGATGAGACTGATCGAGAAGAGATATTTCGTATCCATTTGAACAATATGAAATGCAGCTATATCAACAGACGTGATCTTGCTCGTCAGACAGGAGGCTACACAGGTGCTGATATAAGATTAATCTGTCGGGAAGCAGGTCTTGCAGCTATTGAGGAGAGTTTATGCCGTAAGGAGAGCCTTGATGCCCTAGAAATTAAAATACAACATTTAGAGACTGCGATTAGACAAGTCAAGCCAACAAAAACTCAGTTTTATCAAGAGCTATCTGGAAAATTTCAAAGACTCGTTATTTCTAATATAAACCAAGGAAATTCTTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

AAA

Protein Analysis

1004

Amino Acids

110.32

Weight (kDa)

5.77

Isoelectric Point (pI)

41.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DPBB_CI111	PF26429	38 - 175	1.3e-55	CI111 double-psi beta barrel domain
AAA_16	PF13191	432 - 537	2.7e-07	AAA ATPase domain
AAA	PF00004	434 - 563	1.8e-43	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	587 - 622	5.7e-12	AAA+ lid domain
AAA	PF00004	764 - 895	4.4e-42	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	921 - 951	1.4e-09	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56690
fragaria_vesca	FvH4_6g32040 FvH4_6g32040 FvH4_6g32040 FvH4_6g32040 FvH4_6g32040
malus_domestica	MD09G1206200.v1.1
prunus_persica	Prupe.3G062600_v2.0.a1 Prupe.3G062600_v2.0.a1 Prupe.3G062600_v2.0.a1 Prupe.3G062600_v2.0.a1 Prupe.3G062600_v2.0.a1
pyrus_communis	pycom09g12300
rosa_chinensis	RchiOBHm_Chr2g0139701
rosa_laevigata	RLG00000019827
rosa_multiflora	Rmu_co8172878.1_g000001 Rmu_sc0009714.1_g000008
rosa_roxburghii	Rroxscaffold_2G00105270
rosa_rugosa	Rorug02G0359300 Rorug04G0364300 Rorug04G0364400
rosa_samantha	Rh2AG397600 Rh2AG409100 Rh2BG419400 Rh4CG452300
rosa_wichuraiana	Rw2G033460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1519
Acc36I	ACCTGC	3 cut(s)	1519, 1651, 2816
AccB1I	GGYRCC	1 cut(s)	1690
AccB7I	CCANNNNNTGG	1 cut(s)	376
AccIII	TCCGGA	1 cut(s)	820
AciI	CCGC	2 cut(s)	1087, 2609
AclWI	GGATC	1 cut(s)	387
AcsI	RAATTY	5 cut(s)	616, 1567, 2255, 2963, 3001
AcuI	CTGAAG	3 cut(s)	765, 875, 1416
AfaI	GTAC	9 cut(s)	453, 559, 577, 661, 960, 1324, 1412, 1602, 1906
AflIII	ACRYGT	4 cut(s)	873, 896, 1723, 1965
AhdI	GACNNNNNGTC	1 cut(s)	1267
AjiI	CACGTC	5 cut(s)	791, 876, 897, 1274, 2762
AjnI	CCWGG	8 cut(s)	256, 391, 1122, 1318, 1657, 2114, 2308, 2653
AjuI	GAANNNNNNNTTGG	4 cut(s)	149, 181, 846, 878
Alw21I	GWGCWC	1 cut(s)	1749
Alw26I	GTCTC	6 cut(s)	81, 1085, 2043, 2122, 2690, 2897
AlwI	GGATC	1 cut(s)	387
AlwNI	CAGNNNCTG	1 cut(s)	2798
Ama87I	CYCGRG	1 cut(s)	2334
Aor13HI	TCCGGA	1 cut(s)	820
AoxI	GGCC	3 cut(s)	2091, 2234, 2621
ApeKI	GCWGC	9 cut(s)	768, 1466, 1613, 1817, 1835, 2316, 2498, 2745, 2834
ApoI	RAATTY	5 cut(s)	616, 1567, 2255, 2963, 3001
AseI	ATTAAT	1 cut(s)	2810
Asp700I	GAANNNNTTC	1 cut(s)	1333
AspLEI	GCGC	1 cut(s)	2644
AspS9I	GGNCC	9 cut(s)	504, 1313, 1391, 2235, 2290, 2303, 2381, 2622, 2684
AsuC2I	CCSGG	1 cut(s)	2690
AsuHPI	GGTGA	5 cut(s)	172, 958, 1541, 1748, 2215
AsuII	TTCGAA	1 cut(s)	87
AsuNHI	GCTAGC	1 cut(s)	1457
AvaI	CYCGRG	1 cut(s)	2334
AvaII	GGWCC	7 cut(s)	504, 1313, 1391, 2290, 2303, 2381, 2684
BaeGI	GKGCMC	1 cut(s)	1357
BaeI	ACNNNNGTAYC	2 cut(s)	443, 476
BanI	GGYRCC	1 cut(s)	1690
BbsI	GAAGAC	1 cut(s)	1669
Bbv12I	GWGCWC	1 cut(s)	1749
BbvI	GCAGC	9 cut(s)	780, 1453, 1600, 1804, 1847, 2328, 2485, 2757, 2846
BccI	CCATC	7 cut(s)	151, 1123, 1567, 1571, 1702, 2516, 2567
BceAI	ACGGC	2 cut(s)	1724, 2841
BciT130I	CCWGG	8 cut(s)	258, 393, 1124, 1320, 1659, 2116, 2310, 2655
BciVI	GTATCC	1 cut(s)	2732
BcnI	CCSGG	1 cut(s)	2690
BcoDI	GTCTC	6 cut(s)	81, 1085, 2043, 2122, 2690, 2897
BfaI	CTAG	8 cut(s)	345, 626, 1079, 1458, 1685, 1814, 2133, 2879
BfmI	CTRYAG	2 cut(s)	1149, 1170
BfuAI	ACCTGC	3 cut(s)	1519, 1651, 2816
BfuI	GTATCC	1 cut(s)	2732
BglII	AGATCT	1 cut(s)	1141
BmcAI	AGTACT	3 cut(s)	1412, 1602, 1906
Bme1390I	CCNGG	9 cut(s)	258, 393, 1124, 1320, 1659, 2116, 2310, 2655, 2690
Bme18I	GGWCC	7 cut(s)	504, 1313, 1391, 2290, 2303, 2381, 2684
BmeRI	GACNNNNNGTC	1 cut(s)	1267
BmeT110I	CYCGRG	1 cut(s)	2334
BmgBI	CACGTC	5 cut(s)	791, 876, 897, 1274, 2762
BmgT120I	GGNCC	9 cut(s)	504, 1313, 1391, 2235, 2290, 2303, 2381, 2622, 2684
BmiI	GGNNCC	7 cut(s)	262, 1692, 2237, 2291, 2382, 2685, 2686
BmrFI	CCNGG	9 cut(s)	258, 393, 1124, 1320, 1659, 2116, 2310, 2655, 2690
BmsI	GCATC	8 cut(s)	503, 812, 1060, 1156, 1351, 1489, 1907, 2863
BmtI	GCTAGC	1 cut(s)	1461
BpiI	GAAGAC	1 cut(s)	1669
BplI	GAGNNNNNCTC	2 cut(s)	301, 333
Bpu10I	CCTNAGC	1 cut(s)	432
Bpu14I	TTCGAA	1 cut(s)	87
BpuEI	CTTGAG	1 cut(s)	1733
BpuMI	CCSGG	1 cut(s)	2690
Bsa29I	ATCGAT	1 cut(s)	742
BsaAI	YACGTR	1 cut(s)	1439
BsaI	GGTCTC	2 cut(s)	81, 2122
BsaJI	CCNNGG	5 cut(s)	234, 392, 480, 2688, 2995
BsaWI	WCCGGW	1 cut(s)	820
BsaXI	ACNNNNNCTCC	2 cut(s)	2517, 2547
Bse1I	ACTGG	1 cut(s)	1902
Bse3DI	GCAATG	2 cut(s)	150, 168
BseAI	TCCGGA	1 cut(s)	820
BseBI	CCWGG	8 cut(s)	258, 393, 1124, 1320, 1659, 2116, 2310, 2655
BseCI	ATCGAT	1 cut(s)	742
BseDI	CCNNGG	5 cut(s)	234, 392, 480, 2688, 2995
BseGI	GGATG	9 cut(s)	829, 874, 1171, 1504, 1582, 1898, 2124, 2578, 2698
BseMI	GCAATG	2 cut(s)	150, 168
BseNI	ACTGG	1 cut(s)	1902
BseRI	GAGGAG	2 cut(s)	809, 2858
BseSI	GKGCMC	1 cut(s)	1357
BseXI	GCAGC	9 cut(s)	780, 1453, 1600, 1804, 1847, 2328, 2485, 2757, 2846
BseYI	CCCAGC	1 cut(s)	2461
BsgI	GTGCAG	2 cut(s)	1452, 1629
Bsh1285I	CGRYCG	1 cut(s)	746
BshFI	GGCC	3 cut(s)	2093, 2236, 2623
BshNI	GGYRCC	1 cut(s)	1690
BshVI	ATCGAT	1 cut(s)	742
BsiEI	CGRYCG	1 cut(s)	746
BsiHKAI	GWGCWC	1 cut(s)	1749
BsiHKCI	CYCGRG	1 cut(s)	2334
BsiSI	CCGG	2 cut(s)	821, 2690
BslFI	GGGAC	3 cut(s)	706, 2147, 2697
BsmAI	GTCTC	6 cut(s)	81, 1085, 2043, 2122, 2690, 2897
BsmFI	GGGAC	3 cut(s)	706, 2147, 2697
BsmI	GAATGC	1 cut(s)	2044
BsnI	GGCC	3 cut(s)	2093, 2236, 2623
Bso31I	GGTCTC	2 cut(s)	81, 2122
BsoBI	CYCGRG	1 cut(s)	2334
Bsp119I	TTCGAA	1 cut(s)	87
Bsp1286I	GDGCHC	2 cut(s)	1357, 1749
Bsp13I	TCCGGA	1 cut(s)	820
Bsp143I	GATC	8 cut(s)	379, 743, 1141, 1810, 2429, 2665, 2701, 2764
Bsp19I	CCATGG	2 cut(s)	234, 480
BspACI	CCGC	2 cut(s)	1087, 2609
BspANI	GGCC	3 cut(s)	2093, 2236, 2623
BspDI	ATCGAT	1 cut(s)	742
BspEI	TCCGGA	1 cut(s)	820
BspHI	TCATGA	1 cut(s)	1036
BspLI	GGNNCC	7 cut(s)	262, 1692, 2237, 2291, 2382, 2685, 2686
BspMI	ACCTGC	3 cut(s)	1519, 1651, 2816
BspOI	GCTAGC	1 cut(s)	1461
BspPI	GGATC	1 cut(s)	387
BspQI	GCTCTTC	1 cut(s)	1527
BspT104I	TTCGAA	1 cut(s)	87
BspT107I	GGYRCC	1 cut(s)	1690
BspTNI	GGTCTC	2 cut(s)	81, 2122
BsrDI	GCAATG	2 cut(s)	150, 168
BsrI	ACTGG	1 cut(s)	1902
BssECI	CCNNGG	5 cut(s)	234, 392, 480, 2688, 2995
BssMI	GATC	8 cut(s)	379, 743, 1141, 1810, 2429, 2665, 2701, 2764
BssT1I	CCWWGG	3 cut(s)	234, 480, 2995
Bst2UI	CCWGG	8 cut(s)	258, 393, 1124, 1320, 1659, 2116, 2310, 2655
Bst6I	CTCTTC	5 cut(s)	287, 849, 1132, 1527, 2703
BstAPI	GCANNNNNTGC	1 cut(s)	2831
BstBAI	YACGTR	1 cut(s)	1439
BstBI	TTCGAA	1 cut(s)	87
BstC8I	GCNNGC	4 cut(s)	367, 717, 1431, 1459
BstDSI	CCRYGG	2 cut(s)	234, 480
BstF5I	GGATG	9 cut(s)	829, 874, 1171, 1504, 1582, 1898, 2124, 2578, 2698
BstHHI	GCGC	1 cut(s)	2644
BstKTI	GATC	8 cut(s)	382, 746, 1144, 1813, 2432, 2668, 2704, 2767
BstMAI	GTCTC	6 cut(s)	81, 1085, 2043, 2122, 2690, 2897
BstMBI	GATC	8 cut(s)	379, 743, 1141, 1810, 2429, 2665, 2701, 2764
BstMCI	CGRYCG	1 cut(s)	746
BstMWI	GCNNNNNNNGC	8 cut(s)	161, 170, 226, 1361, 1463, 2242, 2351, 2831
BstNI	CCWGG	8 cut(s)	258, 393, 1124, 1320, 1659, 2116, 2310, 2655
BstNSI	RCATGY	2 cut(s)	1727, 1969
BstSCI	CCNGG	9 cut(s)	256, 391, 1122, 1318, 1657, 2114, 2308, 2653, 2688
BstSFI	CTRYAG	2 cut(s)	1149, 1170
BstSLI	GKGCMC	1 cut(s)	1357
BstV1I	GCAGC	9 cut(s)	780, 1453, 1600, 1804, 1847, 2328, 2485, 2757, 2846
BstV2I	GAAGAC	1 cut(s)	1669
BstX2I	RGATCY	1 cut(s)	1141
BstYI	RGATCY	1 cut(s)	1141
Bsu15I	ATCGAT	1 cut(s)	742
BsuI	GTATCC	1 cut(s)	2732
BsuRI	GGCC	3 cut(s)	2093, 2236, 2623
BsuTUI	ATCGAT	1 cut(s)	742
BtgI	CCRYGG	2 cut(s)	234, 480
BtrI	CACGTC	5 cut(s)	791, 876, 897, 1274, 2762
BtsCI	GGATG	9 cut(s)	829, 874, 1171, 1504, 1582, 1898, 2124, 2578, 2698
BtsI	GCAGTG	1 cut(s)	1559
BtsIMutI	CAGTG	5 cut(s)	559, 1158, 1559, 2439, 2598
BveI	ACCTGC	3 cut(s)	1519, 1651, 2816
Cac8I	GCNNGC	4 cut(s)	367, 717, 1431, 1459
CaiI	CAGNNNCTG	1 cut(s)	2798
CciI	TCATGA	1 cut(s)	1036
CfoI	GCGC	1 cut(s)	2644
Cfr13I	GGNCC	9 cut(s)	504, 1313, 1391, 2235, 2290, 2303, 2381, 2622, 2684
ClaI	ATCGAT	1 cut(s)	742
CseI	GACGC	2 cut(s)	708, 2667
CsiI	ACCWGGT	1 cut(s)	1318
Csp6I	GTAC	9 cut(s)	452, 558, 576, 660, 959, 1323, 1411, 1601, 1905
CviQI	GTAC	9 cut(s)	452, 558, 576, 660, 959, 1323, 1411, 1601, 1905
DpnI	GATC	8 cut(s)	381, 745, 1143, 1812, 2431, 2667, 2703, 2766
DpnII	GATC	8 cut(s)	379, 743, 1141, 1810, 2429, 2665, 2701, 2764
DraI	TTTAAA	1 cut(s)	441
DriI	GACNNNNNGTC	1 cut(s)	1267
Eam1104I	CTCTTC	5 cut(s)	287, 849, 1132, 1527, 2703
Eam1105I	GACNNNNNGTC	1 cut(s)	1267
EarI	CTCTTC	5 cut(s)	287, 849, 1132, 1527, 2703
Eco130I	CCWWGG	3 cut(s)	234, 480, 2995
Eco31I	GGTCTC	2 cut(s)	81, 2122
Eco47I	GGWCC	7 cut(s)	504, 1313, 1391, 2290, 2303, 2381, 2684
Eco57I	CTGAAG	3 cut(s)	765, 875, 1416
Eco88I	CYCGRG	1 cut(s)	2334
EcoO109I	RGGNCCY	2 cut(s)	2290, 2684
EcoRI	GAATTC	1 cut(s)	2255
EcoRII	CCWGG	8 cut(s)	256, 391, 1122, 1318, 1657, 2114, 2308, 2653
EcoT14I	CCWWGG	3 cut(s)	234, 480, 2995
ErhI	CCWWGG	3 cut(s)	234, 480, 2995
FalI	AAGNNNNNCTT	4 cut(s)	204, 236, 2814, 2846
FaqI	GGGAC	3 cut(s)	706, 2147, 2697
FauI	CCCGC	1 cut(s)	1080
FokI	GGATG	9 cut(s)	836, 881, 1178, 1511, 1589, 1885, 2131, 2585, 2705
FspBI	CTAG	8 cut(s)	345, 626, 1079, 1458, 1685, 1814, 2133, 2879
GlaI	GCGC	1 cut(s)	2643
GsaI	CCCAGC	1 cut(s)	2465
HaeIII	GGCC	3 cut(s)	2093, 2236, 2623
HapII	CCGG	2 cut(s)	821, 2690
HgaI	GACGC	2 cut(s)	708, 2667
HhaI	GCGC	1 cut(s)	2644
Hin6I	GCGC	1 cut(s)	2642
HinP1I	GCGC	1 cut(s)	2642
HincII	GTYRAC	2 cut(s)	1372, 2555
HindII	GTYRAC	2 cut(s)	1372, 2555
HindIII	AAGCTT	2 cut(s)	126, 1953
HpaII	CCGG	2 cut(s)	821, 2690
HphI	GGTGA	5 cut(s)	172, 958, 1541, 1748, 2215
Hpy166II	GTNNAC	8 cut(s)	929, 977, 1057, 1283, 1316, 1372, 2019, 2555
Hpy8I	GTNNAC	8 cut(s)	929, 977, 1057, 1283, 1316, 1372, 2019, 2555
Hpy99I	CGWCG	1 cut(s)	792
HpyAV	CCTTC	9 cut(s)	15, 175, 240, 259, 1228, 1482, 2371, 2413, 2506
HpyCH4IV	ACGT	7 cut(s)	349, 790, 875, 896, 1273, 1438, 2761
HpyF10VI	GCNNNNNNNGC	8 cut(s)	161, 170, 226, 1361, 1463, 2242, 2351, 2831
HpySE526I	ACGT	7 cut(s)	349, 790, 875, 896, 1273, 1438, 2761
HspAI	GCGC	1 cut(s)	2642
KflI	GGGWCCC	1 cut(s)	2684
Kpn2I	TCCGGA	1 cut(s)	820
Kzo9I	GATC	8 cut(s)	379, 743, 1141, 1810, 2429, 2665, 2701, 2764
LguI	GCTCTTC	1 cut(s)	1527
LmnI	GCTCC	3 cut(s)	266, 622, 1744
Lsp1109I	GCAGC	9 cut(s)	780, 1453, 1600, 1804, 1847, 2328, 2485, 2757, 2846
LweI	GCATC	8 cut(s)	503, 812, 1060, 1156, 1351, 1489, 1907, 2863
MabI	ACCWGGT	1 cut(s)	1318
MaeI	CTAG	8 cut(s)	345, 626, 1079, 1458, 1685, 1814, 2133, 2879
MaeII	ACGT	7 cut(s)	349, 790, 875, 896, 1273, 1438, 2761
MaeIII	GTNAC	3 cut(s)	946, 1269, 2596
MalI	GATC	8 cut(s)	381, 745, 1143, 1812, 2431, 2667, 2703, 2766
MboI	GATC	8 cut(s)	379, 743, 1141, 1810, 2429, 2665, 2701, 2764
MfeI	CAATTG	2 cut(s)	1503, 2213
MflI	RGATCY	1 cut(s)	1141
MhlI	GDGCHC	2 cut(s)	1357, 1749
MlyI	GAGTC	8 cut(s)	188, 806, 836, 993, 1049, 1414, 1445, 2967
MmeI	TCCRAC	5 cut(s)	72, 357, 660, 1476, 1795
MroI	TCCGGA	1 cut(s)	820
MroXI	GAANNNNTTC	1 cut(s)	1333
MseI	TTAA	6 cut(s)	440, 614, 2084, 2172, 2810, 2886
MspI	CCGG	2 cut(s)	821, 2690
MspR9I	CCNGG	9 cut(s)	258, 393, 1124, 1320, 1659, 2116, 2310, 2655, 2690
MunI	CAATTG	2 cut(s)	1503, 2213
Mva1269I	GAATGC	1 cut(s)	2044
MvaI	CCWGG	8 cut(s)	258, 393, 1124, 1320, 1659, 2116, 2310, 2655
MwoI	GCNNNNNNNGC	8 cut(s)	161, 170, 226, 1361, 1463, 2242, 2351, 2831
NciI	CCSGG	1 cut(s)	2690
NcoI	CCATGG	2 cut(s)	234, 480
NdeII	GATC	8 cut(s)	379, 743, 1141, 1810, 2429, 2665, 2701, 2764
NheI	GCTAGC	1 cut(s)	1457
NlaIV	GGNNCC	7 cut(s)	262, 1692, 2237, 2291, 2382, 2685, 2686
NmuCI	GTSAC	3 cut(s)	946, 1269, 2596
NspI	RCATGY	2 cut(s)	1727, 1969
NspV	TTCGAA	1 cut(s)	87
PagI	TCATGA	1 cut(s)	1036
PaqCI	CACCTGC	1 cut(s)	1519
PciI	ACATGT	2 cut(s)	1723, 1965
PciSI	GCTCTTC	1 cut(s)	1527
PctI	GAATGC	1 cut(s)	2044
PdmI	GAANNNNTTC	1 cut(s)	1333
PfeI	GAWTC	5 cut(s)	739, 1127, 1717, 2209, 2411
PflMI	CCANNNNNTGG	1 cut(s)	376
Ple19I	CGATCG	1 cut(s)	746
PleI	GAGTC	8 cut(s)	188, 805, 835, 992, 1048, 1413, 1445, 2967
PpsI	GAGTC	8 cut(s)	188, 805, 835, 992, 1048, 1413, 1445, 2967
Ppu21I	YACGTR	1 cut(s)	1439
PpuMI	RGGWCCY	2 cut(s)	2290, 2684
PscI	ACATGT	2 cut(s)	1723, 1965
PshBI	ATTAAT	1 cut(s)	2810
Psp5II	RGGWCCY	2 cut(s)	2290, 2684
Psp6I	CCWGG	8 cut(s)	256, 391, 1122, 1318, 1657, 2114, 2308, 2653
PspFI	CCCAGC	1 cut(s)	2461
PspGI	CCWGG	8 cut(s)	256, 391, 1122, 1318, 1657, 2114, 2308, 2653
PspN4I	GGNNCC	7 cut(s)	262, 1692, 2237, 2291, 2382, 2685, 2686
PspPI	GGNCC	9 cut(s)	504, 1313, 1391, 2235, 2290, 2303, 2381, 2622, 2684
PspPPI	RGGWCCY	2 cut(s)	2290, 2684
PstNI	CAGNNNCTG	1 cut(s)	2798
PsuI	RGATCY	1 cut(s)	1141
PvuI	CGATCG	1 cut(s)	746
RsaI	GTAC	9 cut(s)	453, 559, 577, 661, 960, 1324, 1412, 1602, 1906
RsaNI	GTAC	9 cut(s)	452, 558, 576, 660, 959, 1323, 1411, 1601, 1905
SapI	GCTCTTC	1 cut(s)	1527
SaqAI	TTAA	6 cut(s)	440, 614, 2084, 2172, 2810, 2886
Sau3AI	GATC	8 cut(s)	379, 743, 1141, 1810, 2429, 2665, 2701, 2764
Sau96I	GGNCC	9 cut(s)	504, 1313, 1391, 2235, 2290, 2303, 2381, 2622, 2684
ScaI	AGTACT	3 cut(s)	1412, 1602, 1906
SchI	GAGTC	8 cut(s)	188, 806, 836, 993, 1049, 1414, 1445, 2967
ScrFI	CCNGG	9 cut(s)	258, 393, 1124, 1320, 1659, 2116, 2310, 2655, 2690
SduI	GDGCHC	2 cut(s)	1357, 1749
SexAI	ACCWGGT	1 cut(s)	1318
SfaNI	GCATC	8 cut(s)	503, 812, 1060, 1156, 1351, 1489, 1907, 2863
SfcI	CTRYAG	2 cut(s)	1149, 1170
SfuI	TTCGAA	1 cut(s)	87
SinI	GGWCC	7 cut(s)	504, 1313, 1391, 2290, 2303, 2381, 2684
SmlI	CTYRAG	1 cut(s)	1712
SmoI	CTYRAG	1 cut(s)	1712
SsiI	CCGC	2 cut(s)	1087, 2609
SspMI	CTAG	8 cut(s)	345, 626, 1079, 1458, 1685, 1814, 2133, 2879
StyD4I	CCNGG	9 cut(s)	256, 391, 1122, 1318, 1657, 2114, 2308, 2653, 2688
StyI	CCWWGG	3 cut(s)	234, 480, 2995
TaiI	ACGT	7 cut(s)	352, 793, 878, 899, 1276, 1441, 2764
TatI	WGTACW	4 cut(s)	958, 1410, 1600, 1904
TauI	GCSGC	1 cut(s)	2612
TfiI	GAWTC	5 cut(s)	739, 1127, 1717, 2209, 2411
Tru1I	TTAA	6 cut(s)	440, 614, 2084, 2172, 2810, 2886
Tru9I	TTAA	6 cut(s)	440, 614, 2084, 2172, 2810, 2886
TscAI	CASTG	5 cut(s)	559, 1158, 1566, 2439, 2605
TseFI	GTSAC	3 cut(s)	946, 1269, 2596
TseI	GCWGC	9 cut(s)	768, 1466, 1613, 1817, 1835, 2316, 2498, 2745, 2834
Tsp45I	GTSAC	3 cut(s)	946, 1269, 2596
TspGWI	ACGGA	2 cut(s)	414, 2213
TspRI	CASTG	5 cut(s)	559, 1158, 1566, 2439, 2605
Van91I	CCANNNNNTGG	1 cut(s)	376
VpaK11BI	GGWCC	7 cut(s)	504, 1313, 1391, 2290, 2303, 2381, 2684
VspI	ATTAAT	1 cut(s)	2810
XapI	RAATTY	5 cut(s)	616, 1567, 2255, 2963, 3001
XceI	RCATGY	2 cut(s)	1727, 1969
XcmI	CCANNNNNNNNNTGG	2 cut(s)	704, 2172
XmnI	GAANNNNTTC	1 cut(s)	1333
XspI	CTAG	8 cut(s)	345, 626, 1079, 1458, 1685, 1814, 2133, 2879
ZrmI	AGTACT	3 cut(s)	1412, 1602, 1906

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.