RLG00000019827

Calmodulin-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0006784
Physical Location & Seq
Reverse (-)
57196743 .. 57205980
9238 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019827

Sequence Viewer

Length: 3675 bp
ATGGCAATGCAGATCAAGAAGCCGAGCCAGGGTCGCCAAAAGATTGCAATCACCAAAATTCCCAACAGGAGTAATTTACAAGTCACATTCTCGAAACGTTGTGCAGGACTGTTCAAGAAGGCTAGTGAGCTCTGCACACTTTGTGGAGTTGAGATTGCAATAGTAGTCTTTTCTCCTTCCAACAAGCCCTTCTCTTTCGGCCATCCTAGCATTAAGACACTCATCAGCCGCTTTCTTACTCCAAGCCCTTCATCATTTTCCCCTAGTACTCAGCAAGCTCTGTACCCCAGGAAGGCTAGTGTTGAACATGAGCTCAACATGCAGCTAACCAGGACTCAATGCCGACTGGAGGCTGAGAAAAAGCGAGGAGAAGAGCTTGACAAGATGAGTAAAGACAGCCAGCGATCGAGTCATTGTTGGTGGGAGAAGCCAATTGAGGAACTTGGATTGGATGAGCTCCAGATGTTGAAGGCTGCAATGGAGGAGCTCAAGAAGAATGTGATTGAACAAATCCACAAAATAAATGGTCCTGCCAAATTTTCAGTACCATTCTCTGTGATGAATCTTGATCATCATCTTTCTGAGAGAAATTGGACAAAAGTCCGGCGCCTCGGAATTCTCCGCATCCTTTCTCCGAGCTCTGTTCTTGAACCCGGCTCCTGGATGCCTTCAAAGGGCAAGAAGAACTCAAAGGCCCAATCGAGGCTGTCCAACCCTGACAGCTTTGCCTCTTCTGGGTCGATCGATTTTGAACCCAATGAAGCTAATTTTGCTACCTCTCTTGAACAAGCTTCTAGCAAATACCCATCTCTGATTGGGAAATCTGCTTTCATTGGCCAAGTCACCAATGTCGATGACACCTCCAAAGGCTGTAAGATTTGGCTTTCAGAGCCTTCCATGGTGGCCAATTCCTTCACTCCTGGCTCCATTGTATCGGTGTCACTACCTTGTTTGAGAAGTAGAGTTTCAGAGACCTTTCCTCTCAGCTCATTAGCAGATGAATGTGCTAGATGCTTCGGGGTTGAGTCTTGCAAAGGTTTGGCTAATGAACCAGGGAACTACTTTGCTCTTGCAACTATATTTCCTTCTTCTAAGGTTTCAAAGAACGGGGTACGATTGTCTTCAAATCTTTCAAAGACTATGGGTTGTCCTGCATCAGGCACGATCATATTTATCCACTCCGTACAAAATACAGTCCGAGCTGGTCTTTTAAGTGATACAGAAAAACCATCTAGTACCAAAGATTGCCTCTCTGTGTCCGACTGTAAGGAGTTAATTTTGGAACTACTCCATTCCAACAGTAGATTAACTATGAACACTACCTCTACAAACACTTCTGCTGAAAAATCGTTTTACCGGCCTGAAAATGGAATGCCTGCATCCCCTAAGACACCATTGAATCCATCAAAGCTTAGCTATTCTAATAGAAGTCCATTAGCTTCACCTCGACGTGAGGAGTCAGCATCAAGTGTAATCACTCCAGATGAAAAATTTGTTGAACCTTTTGATGTTGAAGAGGTTTTAGGGGATGACACTTCAAAAAGACTTCTTCAGACATGTGCTACTACATGGTTGTATTCTCGTTGTTTACTTCGTGGAAATCTAGTGACTATTCCGGTGCTTTCACAGCATTGTTTACTTCGAGTCATTGGTGCTAAGAGTTTATCCGATGATAAAGCTAATAATGACTCGCTTCATGAGTCCTCTGAGTTAGTGGACAAAGTAAATGATGCTTTTCTAGTGAAGCGGGAAACAAAAGTATGCTTTCATTTGCCATCAAACCTGGAATCTAAAAGAAGAGATCTTTCTATGGTGCAATGCAAGGATTCTATAGCTATTACAGGAGATGACCCATCAAGACTGGGTGGTCTTTCAAAAGAATATGCAGTTTTGAAAGACATCATAATATCATCATCTATGGACACCTTGTCACGTCTTGGTTTACGACCTACAAAGGGAGTGCTTCTTCATGGTCCGCCTGGTACGGGAAAGACTTCTTTGGCTCGATTATGTGCCCGTGATGCTGGTGTCAACTTTTTCTCTGTCAATGGACCTGAAGTTGTGAGTCAGTACTATGGAAAAAGTGAGCAAGCCTTACGTGAAGTTTTTGATTCAGCTAGCCAAGCTGCACCTTCTGTGGTATTCATTGATGAGTTGGATGCAATTGCACCTGCAAGGAAAGAGGGAGGTGAAGAGCTATCTTTGAGAATGGTTGCTACACTGCTGAATTTGATGGATGGGATTAGTACAACTGAAAGAGTACTTGTAATTGCTGCTACCAACAGGCCTGATAGTATTGAGCCTGCACTCAGACGACCTGGAAGACTTGACAGGGAAATTGAAATAGGAGTGCCATCTCCCAAGCAACGGCTTGAGATTCTACATGTTCTTGTCGGTGAAATGGAGCACTGTCTTTCAGATGTGCAAGTCCAACAACTTGCTAATGCTACACATGGTTTCGTAGGCTCTGATCTAGCTGCCCTTTGCAACGAGGCAGCCTTCAGTTCTCTTAGGCGTTTTGTCAATTCTAGATATCCTCATGATTATTTGCATAGAACATCTAGTACTTATGAAGATTGTTCCAACAGTCTAATGGTACCTGATTGCTTAGAAGATACAACAGACATGTCAAGGGATTACTCAGATACTGCATCTTCATCTATCACACATATGGCGTTTTCTTCAGAGAATTGTTTGTCTGTGCATTTGAAGGGGACAAATCAAGATGACGATATTGAAGAAGAATTAAAAGTGACTTTAAAAGATTTTGAAAGTGCCAGGATAAAAGTGAGGCCCAGTGCTATGCGAGAGGTAATCGTTGAGGTCCCGAAGGTTAATTGGGAAGATGTTGGGGGTCAGACGGAGGTGAAGAATCAATTGATAGAAGCTGTAATGTGGCCCCAAAAGCACCAGGATGAATTCAAGCGTATAGGGATTTCTCCCCCAACAGGGGTCCTCATGTTTGGTCCTCCTGGTTGCAGCAAAACCCTCATGGCTCGTGCTGTAGCTTCTGAGGCACGGCTGAATTTCCTTTCTGTGAAGGGTCCAGAACTTTATAGCAAATGGGTTGGTGAATCTGAGAAGGCTGTGAGATCAGTGTTCGCAAAGGCAAGGGCTAATTGCCCAGCAATCATATTCTTTGATGAAATTGACGGTCTTGCTGCCATTCGTGGGAAGGAAAATGATGGAGTGTCTGTTTCAGATAGGGTCATAAGTCAACTTCTTGTCGAAATGGATGGTTTGCAAGAAAGAGTTGATGTCACTGTTATTGCGGCTACAAATCGGCCCGACAAGATTGATAGTGCGCTTCTAAGACCAGGGCGCTTTGATCGCTTGCTATATGTGGGACCTCCAGATGAGACTGATCGTGAAGAGATATTTCGTATCCATTTGAACAATATGAAATGCAGCTATATCAACAGACGTGATCTTGCTCGTCAGGCCGAAGGCTATACAGGTGCTGATATTAGATTAATCTGTCGGGAAGCAGGTCTCGCAGCTATAGAGGAGAGCTTATGCCGTAAGGAGAGCCTTGATGCCTTAGAAATTAAAATGCAACATTTAGAGACTGCGATTAGACAAGTGAAGCCAACAAAAACTCAGTTTTATCAAGAGCTATCTGGAAAGTTTCAAAGACTCGTTCTTTCTAATATAAACCTGGGGAATTCATCCTAG

Protein Analysis

1225

Amino Acids

135.07

Weight (kDa)

7.46

Isoelectric Point (pI)

47.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SRF-TF PF00319 19 - 66 1.5e-23 SRF-type transcription factor (DNA-binding and dimerisation domain)
DPBB_CI111 PF26429 260 - 395 9.7e-61 CI111 double-psi beta barrel domain
AAA_16 PF13191 652 - 757 2.5e-07 AAA ATPase domain
AAA PF00004 654 - 783 6.9e-44 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 807 - 842 1.2e-11 AAA+ lid domain
AAA PF00004 985 - 1116 5.5e-41 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 1142 - 1172 6.4e-10 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2179
AasI GACNNNNNNGTC 1 cut(s) 1866
Acc36I ACCTGC 2 cut(s) 2179, 3479
Acc65I GGTACC 1 cut(s) 2596
AccB1I GGYRCC 2 cut(s) 606, 2596
AciI CCGC 5 cut(s) 229, 622, 1747, 1976, 3272
AclI AACGTT 1 cut(s) 97
AcoI YGGCCR 3 cut(s) 199, 835, 903
AcsI RAATTY 8 cut(s) 57, 536, 615, 1490, 2227, 2918, 3025, 3664
AcuI CTGAAG 4 cut(s) 1535, 2076, 2485, 2667
AcyI GRCGYC 1 cut(s) 607
AdeI CACNNNGTG 1 cut(s) 143
AflIII ACRYGT 3 cut(s) 1556, 2383, 2625
AhdI GACNNNNNGTC 1 cut(s) 1927
AjiI CACGTC 3 cut(s) 1451, 1934, 3425
AjuI GAANNNNNNNTTGG 2 cut(s) 173, 205
Alw21I GWGCWC 6 cut(s) 132, 315, 459, 489, 641, 2409
Alw26I GTCTC 4 cut(s) 965, 3353, 3497, 3560
AlwNI CAGNNNCTG 2 cut(s) 2648, 3461
ApoI RAATTY 8 cut(s) 57, 536, 615, 1490, 2227, 2918, 3025, 3664
AseI ATTAAT 1 cut(s) 3473
Asp700I GAANNNNTTC 1 cut(s) 1993
Asp718I GGTACC 1 cut(s) 2596
AspLEI GCGC 3 cut(s) 609, 3307, 3324
AsuC2I CCSGG 1 cut(s) 654
AsuHPI GGTGA 7 cut(s) 43, 835, 1434, 2201, 2408, 2878, 3083
AsuNHI GCTAGC 1 cut(s) 2117
AvaII GGWCC 8 cut(s) 527, 1973, 2051, 2824, 2953, 2966, 3044, 3347
BaeGI GKGCMC 1 cut(s) 2017
BaeI ACNNNNGTAYC 2 cut(s) 1103, 1136
BalI TGGCCA 2 cut(s) 837, 905
BanI GGYRCC 2 cut(s) 606, 2596
BanII GRGCYC 5 cut(s) 132, 315, 459, 489, 641
BauI CACGAG 1 cut(s) 2997
BbsI GAAGAC 2 cut(s) 1113, 2329
Bbv12I GWGCWC 6 cut(s) 132, 315, 459, 489, 641, 2409
BceAI ACGGC 3 cut(s) 2384, 3035, 3504
BciVI GTATCC 1 cut(s) 3395
BclI TGATCA 1 cut(s) 568
BcnI CCSGG 1 cut(s) 654
BcoDI GTCTC 4 cut(s) 965, 3353, 3497, 3560
BfmI CTRYAG 3 cut(s) 1830, 3003, 3501
BfoI RGCGCY 2 cut(s) 610, 3325
BfuAI ACCTGC 2 cut(s) 2179, 3479
BfuI GTATCC 1 cut(s) 3395
BglII AGATCT 1 cut(s) 1801
BlpI GCTNAGC 1 cut(s) 1412
BmcAI AGTACT 4 cut(s) 268, 2072, 2262, 2566
Bme18I GGWCC 8 cut(s) 527, 1973, 2051, 2824, 2953, 2966, 3044, 3347
BmeRI GACNNNNNGTC 1 cut(s) 1927
BmgBI CACGTC 3 cut(s) 1451, 1934, 3425
BmiI GGNNCC 9 cut(s) 608, 658, 925, 2598, 2826, 2900, 2954, 3045, 3348
BmrI ACTGGG 2 cut(s) 1871, 2790
BmtI GCTAGC 1 cut(s) 2121
BmuI ACTGGG 2 cut(s) 1871, 2790
BoxI GACNNNNGTC 1 cut(s) 599
BpiI GAAGAC 2 cut(s) 1113, 2329
BpmI CTGGAG 4 cut(s) 368, 443, 1464, 3336
Bpu1102I GCTNAGC 1 cut(s) 1412
BpuEI CTTGAG 2 cut(s) 473, 2393
BpuMI CCSGG 1 cut(s) 654
Bsa29I ATCGAT 1 cut(s) 744
BsaAI YACGTR 1 cut(s) 2099
BsaBI GATNNNNATC 2 cut(s) 47, 573
BsaHI GRCGYC 1 cut(s) 607
BsaI GGTCTC 2 cut(s) 965, 3497
BsaJI CCNNGG 7 cut(s) 28, 287, 610, 897, 1052, 3317, 3658
BsaWI WCCGGW 1 cut(s) 1615
BsaXI ACNNNNNCTCC 2 cut(s) 3180, 3210
Bse118I RCCGGY 1 cut(s) 1356
Bse1I ACTGG 3 cut(s) 351, 1866, 2796
Bse3DI GCAATG 3 cut(s) 12, 483, 1823
Bse8I GATNNNNATC 2 cut(s) 47, 573
BseCI ATCGAT 1 cut(s) 744
BseDI CCNNGG 7 cut(s) 28, 287, 610, 897, 1052, 3317, 3658
BseJI GATNNNNATC 2 cut(s) 47, 573
BseMI GCAATG 3 cut(s) 12, 483, 1823
BseNI ACTGG 3 cut(s) 351, 1866, 2796
BseRI GAGGAG 4 cut(s) 381, 497, 1469, 3521
BseSI GKGCMC 1 cut(s) 2017
BseYI CCCAGC 1 cut(s) 3124
BsgI GTGCAG 4 cut(s) 118, 123, 2112, 2289
Bsh1285I CGRYCG 2 cut(s) 407, 744
BshNI GGYRCC 2 cut(s) 606, 2596
BshVI ATCGAT 1 cut(s) 744
BsiEI CGRYCG 2 cut(s) 407, 744
BsiHKAI GWGCWC 6 cut(s) 132, 315, 459, 489, 641, 2409
BsiSI CCGG 4 cut(s) 604, 654, 1357, 1616
BslFI GGGAC 3 cut(s) 2728, 2810, 3360
BsmAI GTCTC 4 cut(s) 965, 3353, 3497, 3560
BsmFI GGGAC 3 cut(s) 2728, 2810, 3360
BsmI GAATGC 1 cut(s) 1377
Bso31I GGTCTC 2 cut(s) 965, 3497
Bsp1286I GDGCHC 7 cut(s) 132, 315, 459, 489, 641, 2017, 2409
Bsp1720I GCTNAGC 1 cut(s) 1412
Bsp19I CCATGG 1 cut(s) 897
BspACI CCGC 5 cut(s) 229, 622, 1747, 1976, 3272
BspDI ATCGAT 1 cut(s) 744
BspHI TCATGA 2 cut(s) 1696, 2539
BspLI GGNNCC 9 cut(s) 608, 658, 925, 2598, 2826, 2900, 2954, 3045, 3348
BspMI ACCTGC 2 cut(s) 2179, 3479
BspOI GCTAGC 1 cut(s) 2121
BspQI GCTCTTC 2 cut(s) 366, 2187
BspT107I GGYRCC 2 cut(s) 606, 2596
BspTNI GGTCTC 2 cut(s) 965, 3497
BsrDI GCAATG 3 cut(s) 12, 483, 1823
BsrFI RCCGGY 1 cut(s) 1356
BsrI ACTGG 3 cut(s) 351, 1866, 2796
BssAI RCCGGY 1 cut(s) 1356
BssECI CCNNGG 7 cut(s) 28, 287, 610, 897, 1052, 3317, 3658
BssNI GRCGYC 1 cut(s) 607
BssSI CACGAG 1 cut(s) 2997
BssT1I CCWWGG 1 cut(s) 897
Bst2BI CACGAG 1 cut(s) 2997
Bst4CI ACNGT 8 cut(s) 111, 1195, 1265, 1301, 2411, 2588, 3155, 3265
Bst6I CTCTTC 6 cut(s) 366, 736, 1509, 1792, 2187, 3366
BstACI GRCGYC 1 cut(s) 607
BstBAI YACGTR 1 cut(s) 2099
BstC8I GCNNGC 7 cut(s) 276, 401, 1377, 2091, 2119, 2304, 3335
BstDSI CCRYGG 1 cut(s) 897
BstENI CCTNNNNNAGG 1 cut(s) 1155
BstH2I RGCGCY 2 cut(s) 610, 3325
BstHHI GCGC 3 cut(s) 609, 3307, 3324
BstMAI GTCTC 4 cut(s) 965, 3353, 3497, 3560
BstMCI CGRYCG 2 cut(s) 407, 744
BstNSI RCATGY 4 cut(s) 322, 1560, 2387, 2629
BstPAI GACNNNNGTC 1 cut(s) 599
BstSFI CTRYAG 3 cut(s) 1830, 3003, 3501
BstSLI GKGCMC 1 cut(s) 2017
BstV2I GAAGAC 2 cut(s) 1113, 2329
BstX2I RGATCY 1 cut(s) 1801
BstYI RGATCY 1 cut(s) 1801
Bsu15I ATCGAT 1 cut(s) 744
BsuI GTATCC 1 cut(s) 3395
BsuTUI ATCGAT 1 cut(s) 744
BtgI CCRYGG 1 cut(s) 897
BtrI CACGTC 3 cut(s) 1451, 1934, 3425
BtsI GCAGTG 1 cut(s) 2219
BtsIMutI CAGTG 5 cut(s) 2219, 2407, 2803, 3102, 3261
BveI ACCTGC 2 cut(s) 2179, 3479
Cac8I GCNNGC 7 cut(s) 276, 401, 1377, 2091, 2119, 2304, 3335
CaiI CAGNNNCTG 2 cut(s) 2648, 3461
CciI TCATGA 2 cut(s) 1696, 2539
CfoI GCGC 3 cut(s) 609, 3307, 3324
Cfr10I RCCGGY 1 cut(s) 1356
ClaI ATCGAT 1 cut(s) 744
DinI GGCGCC 1 cut(s) 608
DraI TTTAAA 1 cut(s) 2760
DraIII CACNNNGTG 1 cut(s) 143
DrdI GACNNNNNNGTC 1 cut(s) 1866
DriI GACNNNNNGTC 1 cut(s) 1927
DseDI GACNNNNNNGTC 1 cut(s) 1866
EaeI YGGCCR 3 cut(s) 199, 835, 903
Eam1104I CTCTTC 6 cut(s) 366, 736, 1509, 1792, 2187, 3366
Eam1105I GACNNNNNGTC 1 cut(s) 1927
EarI CTCTTC 6 cut(s) 366, 736, 1509, 1792, 2187, 3366
EciI GGCGGA 1 cut(s) 1965
Ecl136II GAGCTC 5 cut(s) 130, 313, 457, 487, 639
Eco130I CCWWGG 1 cut(s) 897
Eco147I AGGCCT 1 cut(s) 2287
Eco24I GRGCYC 5 cut(s) 132, 315, 459, 489, 641
Eco31I GGTCTC 2 cut(s) 965, 3497
Eco32I GATATC 1 cut(s) 2534
Eco47I GGWCC 8 cut(s) 527, 1973, 2051, 2824, 2953, 2966, 3044, 3347
Eco53kI GAGCTC 5 cut(s) 130, 313, 457, 487, 639
Eco57I CTGAAG 4 cut(s) 1535, 2076, 2485, 2667
EcoICRI GAGCTC 5 cut(s) 130, 313, 457, 487, 639
EcoNI CCTNNNNNAGG 1 cut(s) 1155
EcoO109I RGGNCCY 3 cut(s) 2824, 2953, 3347
EcoRI GAATTC 3 cut(s) 615, 2918, 3664
EcoRV GATATC 1 cut(s) 2534
EcoT14I CCWWGG 1 cut(s) 897
EcoT38I GRGCYC 5 cut(s) 132, 315, 459, 489, 641
EgeI GGCGCC 1 cut(s) 608
EheI GGCGCC 1 cut(s) 608
ErhI CCWWGG 1 cut(s) 897
FaqI GGGAC 3 cut(s) 2728, 2810, 3360
FauI CCCGC 1 cut(s) 1740
FauNDI CATATG 1 cut(s) 2670
FbaI TGATCA 1 cut(s) 568
FriOI GRGCYC 5 cut(s) 132, 315, 459, 489, 641
GlaI GCGC 3 cut(s) 608, 3306, 3323
GsaI CCCAGC 1 cut(s) 3128
GsuI CTGGAG 4 cut(s) 368, 443, 1464, 3336
HaeII RGCGCY 2 cut(s) 610, 3325
HapII CCGG 4 cut(s) 604, 654, 1357, 1616
HhaI GCGC 3 cut(s) 609, 3307, 3324
Hin1I GRCGYC 1 cut(s) 607
Hin6I GCGC 3 cut(s) 607, 3305, 3322
HinP1I GCGC 3 cut(s) 607, 3305, 3322
HincII GTYRAC 2 cut(s) 2032, 3218
HindII GTYRAC 2 cut(s) 2032, 3218
HindIII AAGCTT 2 cut(s) 789, 1409
HpaII CCGG 4 cut(s) 604, 654, 1357, 1616
HphI GGTGA 7 cut(s) 43, 835, 1434, 2201, 2408, 2878, 3083
Hpy166II GTNNAC 6 cut(s) 1589, 1637, 1717, 1943, 2032, 3218
Hpy8I GTNNAC 6 cut(s) 1589, 1637, 1717, 1943, 2032, 3218
Hpy99I CGWCG 1 cut(s) 1452
HpyCH4III ACNGT 8 cut(s) 111, 1195, 1265, 1301, 2411, 2588, 3155, 3265
HpyCH4IV ACGT 5 cut(s) 97, 1450, 1933, 2098, 3424
HpySE526I ACGT 5 cut(s) 97, 1450, 1933, 2098, 3424
Hsp92I GRCGYC 1 cut(s) 607
HspAI GCGC 3 cut(s) 607, 3305, 3322
KasI GGCGCC 1 cut(s) 606
KpnI GGTACC 1 cut(s) 2600
Ksp22I TGATCA 1 cut(s) 568
LguI GCTCTTC 2 cut(s) 366, 2187
LmnI GCTCC 5 cut(s) 462, 484, 662, 929, 2404
MaeII ACGT 5 cut(s) 97, 1450, 1933, 2098, 3424
MaeIII GTNAC 7 cut(s) 82, 841, 939, 1606, 1929, 2752, 3259
MfeI CAATTG 3 cut(s) 432, 2163, 2876
MflI RGATCY 1 cut(s) 1801
MhlI GDGCHC 7 cut(s) 132, 315, 459, 489, 641, 2017, 2409
MlsI TGGCCA 2 cut(s) 837, 905
MluNI TGGCCA 2 cut(s) 837, 905
Mly113I GGCGCC 1 cut(s) 607
MlyI GAGTC 9 cut(s) 328, 418, 1034, 1466, 1653, 1682, 1709, 2074, 3630
MmeI TCCRAC 7 cut(s) 204, 735, 1284, 1320, 2136, 2455, 2607
Mox20I TGGCCA 2 cut(s) 837, 905
MroXI GAANNNNTTC 1 cut(s) 1993
MscI TGGCCA 2 cut(s) 837, 905
MseI TTAA 9 cut(s) 213, 1211, 1274, 1307, 2747, 2759, 2835, 3473, 3549
MslI CAYNNNNRTG 2 cut(s) 2669, 2913
Msp20I TGGCCA 2 cut(s) 837, 905
MspI CCGG 4 cut(s) 604, 654, 1357, 1616
MunI CAATTG 3 cut(s) 432, 2163, 2876
Mva1269I GAATGC 1 cut(s) 1377
NarI GGCGCC 1 cut(s) 607
NciI CCSGG 1 cut(s) 654
NcoI CCATGG 1 cut(s) 897
NdeI CATATG 1 cut(s) 2670
NheI GCTAGC 1 cut(s) 2117
NlaIV GGNNCC 9 cut(s) 608, 658, 925, 2598, 2826, 2900, 2954, 3045, 3348
NmeAIII GCCGAG 1 cut(s) 48
NmuCI GTSAC 7 cut(s) 82, 841, 939, 1606, 1929, 2752, 3259
NspI RCATGY 4 cut(s) 322, 1560, 2387, 2629
PagI TCATGA 2 cut(s) 1696, 2539
PaqCI CACCTGC 1 cut(s) 2179
PceI AGGCCT 1 cut(s) 2287
PciI ACATGT 3 cut(s) 1556, 2383, 2625
PciSI GCTCTTC 2 cut(s) 366, 2187
PctI GAATGC 1 cut(s) 1377
PdmI GAANNNNTTC 1 cut(s) 1993
PfeI GAWTC 8 cut(s) 562, 1399, 1787, 1826, 2111, 2377, 2872, 3074
PfoI TCCNGGA 1 cut(s) 659
Ple19I CGATCG 2 cut(s) 407, 744
PleI GAGTC 9 cut(s) 328, 417, 1033, 1465, 1652, 1682, 1708, 2073, 3630
PluTI GGCGCC 1 cut(s) 610
PpsI GAGTC 9 cut(s) 328, 417, 1033, 1465, 1652, 1682, 1708, 2073, 3630
Ppu21I YACGTR 1 cut(s) 2099
PpuMI RGGWCCY 3 cut(s) 2824, 2953, 3347
PscI ACATGT 3 cut(s) 1556, 2383, 2625
PshAI GACNNNNGTC 1 cut(s) 599
PshBI ATTAAT 1 cut(s) 3473
Psp124BI GAGCTC 5 cut(s) 132, 315, 459, 489, 641
Psp1406I AACGTT 1 cut(s) 97
Psp5II RGGWCCY 3 cut(s) 2824, 2953, 3347
PspFI CCCAGC 1 cut(s) 3124
PspN4I GGNNCC 9 cut(s) 608, 658, 925, 2598, 2826, 2900, 2954, 3045, 3348
PspPPI RGGWCCY 3 cut(s) 2824, 2953, 3347
PsrI GAACNNNNNNTAC 2 cut(s) 2548, 2580
PstNI CAGNNNCTG 2 cut(s) 2648, 3461
PsuI RGATCY 1 cut(s) 1801
PvuI CGATCG 2 cut(s) 407, 744
RseI CAYNNNNRTG 2 cut(s) 2669, 2913
SacI GAGCTC 5 cut(s) 132, 315, 459, 489, 641
SapI GCTCTTC 2 cut(s) 366, 2187
SaqAI TTAA 9 cut(s) 213, 1211, 1274, 1307, 2747, 2759, 2835, 3473, 3549
ScaI AGTACT 4 cut(s) 268, 2072, 2262, 2566
SchI GAGTC 9 cut(s) 328, 418, 1034, 1466, 1653, 1682, 1709, 2074, 3630
SduI GDGCHC 7 cut(s) 132, 315, 459, 489, 641, 2017, 2409
SfcI CTRYAG 3 cut(s) 1830, 3003, 3501
SfoI GGCGCC 1 cut(s) 608
SinI GGWCC 8 cut(s) 527, 1973, 2051, 2824, 2953, 2966, 3044, 3347
SmiMI CAYNNNNRTG 2 cut(s) 2669, 2913
SmlI CTYRAG 2 cut(s) 488, 2372
SmoI CTYRAG 2 cut(s) 488, 2372
SseBI AGGCCT 1 cut(s) 2287
SsiI CCGC 5 cut(s) 229, 622, 1747, 1976, 3272
SspDI GGCGCC 1 cut(s) 606
SstI GAGCTC 5 cut(s) 132, 315, 459, 489, 641
StuI AGGCCT 1 cut(s) 2287
StyI CCWWGG 1 cut(s) 897
TaaI ACNGT 8 cut(s) 111, 1195, 1265, 1301, 2411, 2588, 3155, 3265
TaiI ACGT 5 cut(s) 100, 1453, 1936, 2101, 3427
TatI WGTACW 5 cut(s) 266, 2070, 2246, 2260, 2564
TauI GCSGC 2 cut(s) 231, 3275
TfiI GAWTC 8 cut(s) 562, 1399, 1787, 1826, 2111, 2377, 2872, 3074
Tru1I TTAA 9 cut(s) 213, 1211, 1274, 1307, 2747, 2759, 2835, 3473, 3549
Tru9I TTAA 9 cut(s) 213, 1211, 1274, 1307, 2747, 2759, 2835, 3473, 3549
TscAI CASTG 5 cut(s) 2226, 2414, 2803, 3102, 3268
TseFI GTSAC 7 cut(s) 82, 841, 939, 1606, 1929, 2752, 3259
Tsp45I GTSAC 7 cut(s) 82, 841, 939, 1606, 1929, 2752, 3259
TspGWI ACGGA 2 cut(s) 1171, 2876
TspRI CASTG 5 cut(s) 2226, 2414, 2803, 3102, 3268
VpaK11BI GGWCC 8 cut(s) 527, 1973, 2051, 2824, 2953, 2966, 3044, 3347
VspI ATTAAT 1 cut(s) 3473
XagI CCTNNNNNAGG 1 cut(s) 1155
XapI RAATTY 8 cut(s) 57, 536, 615, 1490, 2227, 2918, 3025, 3664
XbaI TCTAGA 1 cut(s) 2528
XceI RCATGY 4 cut(s) 322, 1560, 2387, 2629
XcmI CCANNNNNNNNNTGG 2 cut(s) 521, 2590
XmnI GAANNNNTTC 1 cut(s) 1993
ZrmI AGTACT 4 cut(s) 268, 2072, 2262, 2566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.