Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010475

Physical Location & Seq

Genomic Coordinates Reverse (-)

21153815 .. 21156075

Gene Structure 2261 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G57150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGCGGAGGTCGACATCTCACACTCGAAGAAGAAGAAGCAAGACAAAACGGAGAACGATGCCGCCGACACCGGAGACTACATGATCAAGCCACAGAGTTTCACTCCAGCCATCGACACTTCTCAGTGGCCCATCCTCCTCAAGAACTACGACCGCCTCAACGTCCGTACCGGTCACTACACTCCAATCAGCGCCGGTCACTCTCCTCTGAAACGTCCTCTTCAAGAGTATATCAGGTACGGTGTCATCAATCTCGATAAACCCGCGAACCCTTCTTCTCACGAGGTCGTTGCTTGGATTAAGCGTATCCTCCGTGTTGAGAAAACCGGTCACAGTGGTACTCTTGACCCAAAAGTCACTGGAAACCTCATTGTCTGTATTGACCGAGCCACACGGCTTGTGAAATCGCAGCAAGGTGCGGGTAAAGAGTACGTTTGTGTTGCTCGGCTTCACTCAGCTGTCCCTGATGTTGCTAAAGTAGCTAGAGCTCTTGAATCGCTCACTGGAGCTGTGTTTCAGAGGCCTCCTTTGATCTCTGCTGTTAAAAGACAGCTTAGGATTAGGACAATCTATGAAAGCAAGCTGCTTGAGTATGATGCTGATAGGCATTTGGTTGTTTTCTGGGTTTCTTGTGAGGCGGGTACTTACATTAGGACTATGTGTGTTCACTTGGGTTTACTTCTTGGGGTTGGTGGGCATATGCAGGAGCTTAGGAGGGTTAGGTCTGGGATTTTGGGTGAGAATAATAACATGGTTACTATGCATGATGTGATGGATGCCCAATTTGTGTATGACAACTCCAGAGATGAGTCTTATCTTAGGAGGGTGATTATGCCTCTTGAGATGATATTGACGAGTTACAAGAGACTTGTTGTCAAGGATTCTGCTGTGAATGCTATCTGTTATGGTGCTAAGTTGATGATTCCTGGGTTGTTGAGATTCGAGAATGACATTGATGTTGGTACTGAAGTCGTTCTTATGACTACCAAGGGTGAGGCGATTGCCGTTGGGATTGCTGAGATGACAACATCTGTGATGGCTACTTGTGATCATGGTGTGGTAGCTAAGATCAAGCGTGTGGTGATGGATAGAGATACCTACCCGAGGAAGTGGGGATTGGGACCAAGGGCTTCTATGAAGAAGAAGCTTATTGCTGATGGGAAATTGGATAAGCATGGGAAGCCTAATGAGAAGACTCCGGTTGAGTGGAGCAGGAATGTGGTTTTGCCTACCGGTGGAGATGCTATAATTGCTGGTGCTGCTGCTGCTCCTGAGGAGATAAAGGCTGACGCTGAGAATGGAGAAGCAGGGGAAGCGCGTAAGCGTAAGCATGATGATAGCAGTGATAGCCCTGCTCCTGTAACAACCAAGAAATCTAAAACCAAAGAAGTTGAAGGAGAAGAGGCTGAAGAGAAGGTGAAGTCTTCTAAGAAGAAGAAGAAGAAGGATAAGGAAGAGGAGAAAGAAGAGGAAGCCGGGTCTGAGAAGAAGGAAAAGAAGAAGAAGAAAGATAAGAAGGAGGAGGTTATAGAAGAGGTAGCTTCACCAAAGTCTGAGAAGAAGAAGAAAAAGAAGAGCAAAGACACCGAAGCTGCTGTTGACGCAGAAGATGAATCAGCAGCAGAGAAGAGTGAGAAGAAAAAGAAAAAGAAGGATAAGAAGAAGAAGAACAAAGACAGTGAGGATGATGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000495 GO:0001522 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005732 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009506 GO:0009982 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016556 GO:0016853 GO:0016866 GO:0022613 GO:0030054 GO:0031118 GO:0031120 GO:0031123 GO:0031126 GO:0031429 GO:0031974 GO:0031981 GO:0032991 GO:0033979 GO:0034470 GO:0034641 GO:0034660 GO:0034964 GO:0040031 GO:0042254 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043628 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0055044 GO:0070013 GO:0071704 GO:0071840 GO:0072588 GO:0090304 GO:1901360 GO:1902494 GO:1990481 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

DKCLD PUA TruB_C_2 TruB_N

Protein Analysis

565

Amino Acids

63.03

Weight (kDa)

9.19

Isoelectric Point (pI)

38.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DKCLD	PF08068	40 - 97	3.8e-32	DKCLD (NUC011) domain
TruB_N	PF01509	101 - 217	3.7e-21	TruB family pseudouridylate synthase (N terminal domain)
TruB_C_2	PF16198	218 - 284	5.5e-26	tRNA pseudouridylate synthase B C-terminal domain
PUA	PF01472	288 - 361	1.5e-23	PUA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010475)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57150
fragaria_vesca	FvH4_5g20900 FvH4_5g20900 FvH4_5g20900
malus_domestica	MD06G1043100.v1.1 MD16G1267700.v1.1 MD16G1267900.v1.1
prunus_persica	Prupe.1G572500_v2.0.a1 Prupe.5G050000_v2.0.a1
pyrus_communis	pycom06g03610 pycom16g23720
rosa_chinensis	RchiOBHm_Chr7g0207911
rosa_laevigata	RLG00000003276
rosa_multiflora	Rmu_sc0006577.1_g000004
rosa_roxburghii	Rroxscaffold_3G00251050
rosa_rugosa	Rorug07G0100200
rosa_samantha	Rh7AG233600 Rh7BG229200 Rh7CG248900 Rh7DG239600
rosa_wichuraiana	Rw0G001290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	353
AccI	GTMKAC	1 cut(s)	12
AccII	CGCG	2 cut(s)	266, 1318
AciI	CCGC	6 cut(s)	5, 63, 154, 264, 419, 638
AcuI	CTGAAG	2 cut(s)	987, 1428
AfaI	GTAC	6 cut(s)	169, 239, 340, 431, 643, 964
AfiI	CCNNNNNNNGG	2 cut(s)	1104, 1235
AgeI	ACCGGT	3 cut(s)	170, 326, 1232
AgsI	TTSAA	3 cut(s)	224, 494, 1394
AhdI	GACNNNNNGTC	1 cut(s)	872
AjnI	CCWGG	1 cut(s)	925
AjuI	GAANNNNNNNTTGG	2 cut(s)	1100, 1132
Alw21I	GWGCWC	1 cut(s)	490
Alw26I	GTCTC	2 cut(s)	69, 859
Ama87I	CYCGRG	1 cut(s)	1102
AoxI	GGCC	2 cut(s)	128, 521
ApeKI	GCWGC	7 cut(s)	409, 583, 1259, 1262, 1265, 1592, 1619
AsiGI	ACCGGT	3 cut(s)	170, 326, 1232
Asp700I	GAANNNNTTC	1 cut(s)	972
AspLEI	GCGC	2 cut(s)	194, 1318
AspS9I	GGNCC	2 cut(s)	129, 1121
AsuC2I	CCSGG	1 cut(s)	1477
AsuHPI	GGTGA	6 cut(s)	749, 838, 1004, 1093, 1429, 1536
AvaI	CYCGRG	1 cut(s)	1102
AvaII	GGWCC	1 cut(s)	1121
AxyI	CCTNAGG	1 cut(s)	1272
BaeI	ACNNNNGTAYC	4 cut(s)	151, 184, 954, 987
BanII	GRGCYC	1 cut(s)	490
BauI	CACGAG	1 cut(s)	281
BbsI	GAAGAC	2 cut(s)	1199, 1416
Bbv12I	GWGCWC	1 cut(s)	490
BbvI	GCAGC	7 cut(s)	421, 570, 1246, 1249, 1252, 1579, 1631
BccI	CCATC	6 cut(s)	119, 140, 766, 1030, 1078, 1151
BceAI	ACGGC	2 cut(s)	410, 989
BcgI	CGANNNNNNTGC	2 cut(s)	272, 306
BciT130I	CCWGG	1 cut(s)	927
BciVI	GTATCC	1 cut(s)	317
BclI	TGATCA	2 cut(s)	84, 1048
BcnI	CCSGG	1 cut(s)	1477
BcoDI	GTCTC	2 cut(s)	69, 859
BfaI	CTAG	1 cut(s)	483
BfoI	RGCGCY	1 cut(s)	195
BfuI	GTATCC	1 cut(s)	317
BisI	GCNGC	8 cut(s)	63, 410, 584, 1260, 1263, 1266, 1593, 1620
BlsI	GCNGC	8 cut(s)	64, 411, 585, 1261, 1264, 1267, 1594, 1621
Bme1390I	CCNGG	2 cut(s)	927, 1477
Bme18I	GGWCC	1 cut(s)	1121
BmeRI	GACNNNNNGTC	1 cut(s)	872
BmeT110I	CYCGRG	1 cut(s)	1102
BmgT120I	GGNCC	2 cut(s)	129, 1121
BmiI	GGNNCC	1 cut(s)	1122
BmrFI	CCNGG	2 cut(s)	927, 1477
BmsI	GCATC	4 cut(s)	49, 586, 766, 1231
BpiI	GAAGAC	2 cut(s)	1199, 1416
BplI	GAGNNNNNCTC	2 cut(s)	88, 120
BpmI	CTGGAG	3 cut(s)	90, 525, 784
Bpu10I	CCTNAGC	2 cut(s)	554, 710
BpuEI	CTTGAG	3 cut(s)	125, 608, 860
BpuMI	CCSGG	1 cut(s)	1477
BsaJI	CCNNGG	4 cut(s)	926, 987, 1103, 1124
BsaWI	WCCGGW	5 cut(s)	71, 170, 326, 1198, 1232
Bsc4I	CCNNNNNNNGG	2 cut(s)	1104, 1235
Bse118I	RCCGGY	4 cut(s)	170, 194, 326, 1232
Bse1I	ACTGG	2 cut(s)	364, 508
Bse21I	CCTNAGG	1 cut(s)	1272
BseBI	CCWGG	1 cut(s)	927
BseDI	CCNNGG	4 cut(s)	926, 987, 1103, 1124
BseGI	GGATG	3 cut(s)	132, 781, 1690
BseLI	CCNNNNNNNGG	2 cut(s)	1104, 1235
BseMII	CTCAG	7 cut(s)	137, 468, 1008, 1263, 1284, 1473, 1545
BseNI	ACTGG	2 cut(s)	364, 508
BseRI	GAGGAG	5 cut(s)	128, 195, 1289, 1472, 1535
BseXI	GCAGC	7 cut(s)	421, 570, 1246, 1249, 1252, 1579, 1631
Bsh1236I	CGCG	2 cut(s)	266, 1318
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	2 cut(s)	130, 523
BshTI	ACCGGT	3 cut(s)	170, 326, 1232
BsiEI	CGRYCG	1 cut(s)	154
BsiHKAI	GWGCWC	1 cut(s)	490
BsiHKCI	CYCGRG	1 cut(s)	1102
BsiSI	CCGG	7 cut(s)	72, 171, 195, 327, 1199, 1233, 1476
BslFI	GGGAC	2 cut(s)	446, 1134
BslI	CCNNNNNNNGG	2 cut(s)	1104, 1235
BsmAI	GTCTC	2 cut(s)	69, 859
BsmFI	GGGAC	2 cut(s)	446, 1134
BsmI	GAATGC	1 cut(s)	898
BsnI	GGCC	2 cut(s)	130, 523
BsoBI	CYCGRG	1 cut(s)	1102
Bsp1286I	GDGCHC	1 cut(s)	490
Bsp143I	GATC	4 cut(s)	84, 531, 1048, 1068
BspACI	CCGC	6 cut(s)	5, 63, 154, 264, 419, 638
BspANI	GGCC	2 cut(s)	130, 523
BspCNI	CTCAG	7 cut(s)	136, 467, 1009, 1264, 1285, 1474, 1546
BspFNI	CGCG	2 cut(s)	266, 1318
BspLI	GGNNCC	1 cut(s)	1122
BspQI	GCTCTTC	1 cut(s)	1568
BsrFI	RCCGGY	4 cut(s)	170, 194, 326, 1232
BsrI	ACTGG	2 cut(s)	364, 508
BssAI	RCCGGY	4 cut(s)	170, 194, 326, 1232
BssECI	CCNNGG	4 cut(s)	926, 987, 1103, 1124
BssMI	GATC	4 cut(s)	84, 531, 1048, 1068
BssSI	CACGAG	1 cut(s)	281
BssT1I	CCWWGG	2 cut(s)	987, 1124
Bst2BI	CACGAG	1 cut(s)	281
Bst2UI	CCWGG	1 cut(s)	927
Bst4CI	ACNGT	3 cut(s)	242, 335, 1679
Bst6I	CTCTTC	8 cut(s)	225, 1395, 1404, 1449, 1461, 1527, 1568, 1622
BstC8I	GCNNGC	1 cut(s)	581
BstENI	CCTNNNNNAGG	1 cut(s)	1102
BstF5I	GGATG	3 cut(s)	132, 781, 1690
BstFNI	CGCG	2 cut(s)	266, 1318
BstH2I	RGCGCY	1 cut(s)	195
BstHHI	GCGC	2 cut(s)	194, 1318
BstKTI	GATC	4 cut(s)	87, 534, 1051, 1071
BstMAI	GTCTC	2 cut(s)	69, 859
BstMBI	GATC	4 cut(s)	84, 531, 1048, 1068
BstMCI	CGRYCG	1 cut(s)	154
BstMWI	GCNNNNNNNGC	9 cut(s)	479, 893, 1180, 1250, 1259, 1265, 1313, 1347, 1601
BstNI	CCWGG	1 cut(s)	927
BstSCI	CCNGG	2 cut(s)	925, 1475
BstUI	CGCG	2 cut(s)	266, 1318
BstV1I	GCAGC	7 cut(s)	421, 570, 1246, 1249, 1252, 1579, 1631
BstV2I	GAAGAC	2 cut(s)	1199, 1416
Bsu36I	CCTNAGG	1 cut(s)	1272
BsuI	GTATCC	1 cut(s)	317
BsuRI	GGCC	2 cut(s)	130, 523
BtsCI	GGATG	3 cut(s)	132, 781, 1690
BtsI	GCAGTG	1 cut(s)	1348
BtsIMutI	CAGTG	6 cut(s)	131, 340, 357, 501, 1348, 1684
Cac8I	GCNNGC	1 cut(s)	581
CfoI	GCGC	2 cut(s)	194, 1318
Cfr10I	RCCGGY	4 cut(s)	170, 194, 326, 1232
Cfr13I	GGNCC	2 cut(s)	129, 1121
CseI	GACGC	2 cut(s)	1298, 1610
Csp6I	GTAC	6 cut(s)	168, 238, 339, 430, 642, 963
CspAI	ACCGGT	3 cut(s)	170, 326, 1232
CspCI	CAANNNNNGTGG	2 cut(s)	379, 414
CviAII	CATG	6 cut(s)	82, 751, 764, 1052, 1175, 1331
CviQI	GTAC	6 cut(s)	168, 238, 339, 430, 642, 963
DpnI	GATC	4 cut(s)	86, 533, 1050, 1070
DpnII	GATC	4 cut(s)	84, 531, 1048, 1068
DrdI	GACNNNNNNGTC	1 cut(s)	353
DriI	GACNNNNNGTC	1 cut(s)	872
DseDI	GACNNNNNNGTC	1 cut(s)	353
Eam1104I	CTCTTC	8 cut(s)	225, 1395, 1404, 1449, 1461, 1527, 1568, 1622
Eam1105I	GACNNNNNGTC	1 cut(s)	872
EarI	CTCTTC	8 cut(s)	225, 1395, 1404, 1449, 1461, 1527, 1568, 1622
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	488
Eco130I	CCWWGG	2 cut(s)	987, 1124
Eco147I	AGGCCT	1 cut(s)	523
Eco24I	GRGCYC	1 cut(s)	490
Eco47I	GGWCC	1 cut(s)	1121
Eco53kI	GAGCTC	1 cut(s)	488
Eco57I	CTGAAG	2 cut(s)	987, 1428
Eco81I	CCTNAGG	1 cut(s)	1272
Eco88I	CYCGRG	1 cut(s)	1102
EcoICRI	GAGCTC	1 cut(s)	488
EcoNI	CCTNNNNNAGG	1 cut(s)	1102
EcoRII	CCWGG	1 cut(s)	925
EcoT14I	CCWWGG	2 cut(s)	987, 1124
EcoT22I	ATGCAT	1 cut(s)	765
EcoT38I	GRGCYC	1 cut(s)	490
ErhI	CCWWGG	2 cut(s)	987, 1124
FaeI	CATG	6 cut(s)	85, 754, 767, 1055, 1178, 1334
FalI	AAGNNNNNCTT	2 cut(s)	960, 992
FaqI	GGGAC	2 cut(s)	446, 1134
FatI	CATG	6 cut(s)	81, 750, 763, 1051, 1174, 1330
FauI	CCCGC	3 cut(s)	271, 412, 631
FauNDI	CATATG	1 cut(s)	699
FbaI	TGATCA	2 cut(s)	84, 1048
FblI	GTMKAC	1 cut(s)	12
Fnu4HI	GCNGC	8 cut(s)	63, 410, 584, 1260, 1263, 1266, 1593, 1620
FokI	GGATG	2 cut(s)	119, 788
FriOI	GRGCYC	1 cut(s)	490
Fsp4HI	GCNGC	8 cut(s)	63, 410, 584, 1260, 1263, 1266, 1593, 1620
FspBI	CTAG	1 cut(s)	483
GlaI	GCGC	2 cut(s)	193, 1317
GluI	GCNGC	8 cut(s)	63, 410, 584, 1260, 1263, 1266, 1593, 1620
GsuI	CTGGAG	3 cut(s)	90, 525, 784
HaeII	RGCGCY	1 cut(s)	195
HaeIII	GGCC	2 cut(s)	130, 523
HapII	CCGG	7 cut(s)	72, 171, 195, 327, 1199, 1233, 1476
HgaI	GACGC	2 cut(s)	1298, 1610
HhaI	GCGC	2 cut(s)	194, 1318
Hin1II	CATG	6 cut(s)	85, 754, 767, 1055, 1178, 1334
Hin6I	GCGC	2 cut(s)	192, 1316
HinP1I	GCGC	2 cut(s)	192, 1316
HincII	GTYRAC	2 cut(s)	13, 1600
HindII	GTYRAC	2 cut(s)	13, 1600
HindIII	AAGCTT	1 cut(s)	1145
HinfI	GANTC	7 cut(s)	494, 809, 881, 922, 939, 1195, 1613
HpaII	CCGG	7 cut(s)	72, 171, 195, 327, 1199, 1233, 1476
HphI	GGTGA	6 cut(s)	749, 838, 1004, 1093, 1429, 1536
Hpy166II	GTNNAC	4 cut(s)	13, 667, 677, 1600
Hpy188I	TCNGA	4 cut(s)	210, 519, 1483, 1555
Hpy8I	GTNNAC	4 cut(s)	13, 667, 677, 1600
HpyAV	CCTTC	7 cut(s)	282, 1388, 1408, 1438, 1483, 1510, 1645
HpyCH4III	ACNGT	3 cut(s)	242, 335, 1679
HpyCH4IV	ACGT	3 cut(s)	162, 214, 432
HpyCH4V	TGCA	2 cut(s)	703, 763
HpyF10VI	GCNNNNNNNGC	9 cut(s)	479, 893, 1180, 1250, 1259, 1265, 1313, 1347, 1601
HpySE526I	ACGT	3 cut(s)	162, 214, 432
Hsp92II	CATG	6 cut(s)	85, 754, 767, 1055, 1178, 1334
HspAI	GCGC	2 cut(s)	192, 1316
Ksp22I	TGATCA	2 cut(s)	84, 1048
Kzo9I	GATC	4 cut(s)	84, 531, 1048, 1068
LguI	GCTCTTC	1 cut(s)	1568
LmnI	GCTCC	5 cut(s)	506, 706, 1209, 1273, 1360
Lsp1109I	GCAGC	7 cut(s)	421, 570, 1246, 1249, 1252, 1579, 1631
LweI	GCATC	4 cut(s)	49, 586, 766, 1231
MaeI	CTAG	1 cut(s)	483
MaeII	ACGT	3 cut(s)	162, 214, 432
MaeIII	GTNAC	7 cut(s)	173, 197, 329, 355, 754, 857, 1360
MalI	GATC	4 cut(s)	86, 533, 1050, 1070
MboI	GATC	4 cut(s)	84, 531, 1048, 1068
MhlI	GDGCHC	1 cut(s)	490
MluCI	AATT	3 cut(s)	782, 1163, 1248
MlyI	GAGTC	2 cut(s)	818, 1189
Mph1103I	ATGCAT	1 cut(s)	765
MroXI	GAANNNNTTC	1 cut(s)	972
MseI	TTAA	2 cut(s)	300, 543
MspA1I	CMGCKG	1 cut(s)	458
MspI	CCGG	7 cut(s)	72, 171, 195, 327, 1199, 1233, 1476
MspR9I	CCNGG	2 cut(s)	927, 1477
Mva1269I	GAATGC	1 cut(s)	898
MvaI	CCWGG	1 cut(s)	927
MvnI	CGCG	2 cut(s)	266, 1318
MwoI	GCNNNNNNNGC	9 cut(s)	479, 893, 1180, 1250, 1259, 1265, 1313, 1347, 1601
NciI	CCSGG	1 cut(s)	1477
NdeI	CATATG	1 cut(s)	699
NdeII	GATC	4 cut(s)	84, 531, 1048, 1068
NlaIII	CATG	6 cut(s)	85, 754, 767, 1055, 1178, 1334
NlaIV	GGNNCC	1 cut(s)	1122
NmeAIII	GCCGAG	1 cut(s)	424
NmuCI	GTSAC	4 cut(s)	173, 197, 329, 355
NsiI	ATGCAT	1 cut(s)	765
PceI	AGGCCT	1 cut(s)	523
PciSI	GCTCTTC	1 cut(s)	1568
PcsI	WCGNNNNNNNCGW	1 cut(s)	63
PctI	GAATGC	1 cut(s)	898
PdmI	GAANNNNTTC	1 cut(s)	972
PfeI	GAWTC	5 cut(s)	494, 881, 922, 939, 1613
PinAI	ACCGGT	3 cut(s)	170, 326, 1232
PkrI	GCNGC	8 cut(s)	64, 411, 585, 1261, 1264, 1267, 1594, 1621
PleI	GAGTC	2 cut(s)	817, 1189
PpsI	GAGTC	2 cut(s)	817, 1189
Psp124BI	GAGCTC	1 cut(s)	490
Psp6I	CCWGG	1 cut(s)	925
PspGI	CCWGG	1 cut(s)	925
PspN4I	GGNNCC	1 cut(s)	1122
PspPI	GGNCC	2 cut(s)	129, 1121
PvuII	CAGCTG	1 cut(s)	458
RsaI	GTAC	6 cut(s)	169, 239, 340, 431, 643, 964
RsaNI	GTAC	6 cut(s)	168, 238, 339, 430, 642, 963
SacI	GAGCTC	1 cut(s)	490
SalI	GTCGAC	1 cut(s)	11
SapI	GCTCTTC	1 cut(s)	1568
SaqAI	TTAA	2 cut(s)	300, 543
SatI	GCNGC	8 cut(s)	63, 410, 584, 1260, 1263, 1266, 1593, 1620
Sau3AI	GATC	4 cut(s)	84, 531, 1048, 1068
Sau96I	GGNCC	2 cut(s)	129, 1121
SchI	GAGTC	2 cut(s)	818, 1189
ScrFI	CCNGG	2 cut(s)	927, 1477
SduI	GDGCHC	1 cut(s)	490
SfaNI	GCATC	4 cut(s)	49, 586, 766, 1231
SinI	GGWCC	1 cut(s)	1121
SmlI	CTYRAG	3 cut(s)	140, 587, 839
SmoI	CTYRAG	3 cut(s)	140, 587, 839
Sse9I	AATT	3 cut(s)	782, 1163, 1248
SseBI	AGGCCT	1 cut(s)	523
SsiI	CCGC	6 cut(s)	5, 63, 154, 264, 419, 638
SspMI	CTAG	1 cut(s)	483
SstI	GAGCTC	1 cut(s)	490
StuI	AGGCCT	1 cut(s)	523
StyD4I	CCNGG	2 cut(s)	925, 1475
StyI	CCWWGG	2 cut(s)	987, 1124
TaaI	ACNGT	3 cut(s)	242, 335, 1679
TaiI	ACGT	3 cut(s)	165, 217, 435
TaqI	TCGA	5 cut(s)	12, 26, 114, 255, 942
TaqII	GACCGA	1 cut(s)	399
TasI	AATT	3 cut(s)	782, 1163, 1248
TauI	GCSGC	1 cut(s)	65
TfiI	GAWTC	5 cut(s)	494, 881, 922, 939, 1613
Tru1I	TTAA	2 cut(s)	300, 543
Tru9I	TTAA	2 cut(s)	300, 543
TscAI	CASTG	6 cut(s)	131, 340, 364, 508, 1348, 1684
TseFI	GTSAC	4 cut(s)	173, 197, 329, 355
TseI	GCWGC	7 cut(s)	409, 583, 1259, 1262, 1265, 1592, 1619
Tsp45I	GTSAC	4 cut(s)	173, 197, 329, 355
TspDTI	ATGAA	3 cut(s)	588, 1151, 1626
TspGWI	ACGGA	3 cut(s)	65, 155, 302
TspRI	CASTG	6 cut(s)	131, 340, 364, 508, 1348, 1684
VpaK11BI	GGWCC	1 cut(s)	1121
XagI	CCTNNNNNAGG	1 cut(s)	1102
XmiI	GTMKAC	1 cut(s)	12
XmnI	GAANNNNTTC	1 cut(s)	972
XspI	CTAG	1 cut(s)	483
Zsp2I	ATGCAT	1 cut(s)	765

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.