Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0010475

Physical Location & Seq

Genomic Coordinates Forward (+)

4516610 .. 4518205

Gene Structure 1596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g03610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGATCAAGCCCCAGAGCTCAACTCCCTCCTTGGACACCTCTCAGTGGCCTATACTTCTTAAAAACTATGACCGCCTCAATGTTCGAACTGGACACTACACTCCTCTACCCTCAGGGTTTTCCCCCCTTAAGAGGCCTCTTGCTGAGTACATCCGATATGGTGTTCTCAATCTTGACAAGCCTGCAAACCCCTCGTCGCACGAGGTTGTTGCTTGGATTAAGCGCATCCTTCGTGTTGAGAAAACTGGCCACAGCGGTACCCTGGATCCTAAGGTTACAGGTAATCTCATTGTCTGCATTGACCGAGCCACACGACTTGTCAAGTCCCAGCAGGGTGCAGGGAAAGAGTATGTTTGTGTTGCCCGCTTGCATTCAGCTGTGCCTGATGTTGCCAAGGTGGCTCGGGCCCTTGAATCCCTGACTGGGGCTGTCTTTCAGAGGCCACCTTTGATATCAGCAGTCAAAAGGCAGCTTAGGATTAGGACCATCTATGAAAGCAAGCTTCTTGAGTATGATGCAGATAAACATTTGGTTGTTTTCTGGATTTCTTGCGAAGCAGGAACCTATGTGCGTACACTCTGTGTGCATTTGGGTCTGCTTCTTGGTGTGGGAGGTCATATGCAGGAGCTTAGGAGGGTCAGGTCTGGGATCATGGGTGAGAAAGACAACATGGTCACAATGCATGATGTCATGGATGCTCAGTGGGCTTATGACACTAATAGGGATGAGAGTTATTTGAGGAGGGTCATCATGCCTCTTGAGGTTCTCTTGACTAGTTATAAGAGATTGGTTGTCAAGGACTCAGCAGTGAATGCCATTTGCTACGGTGCCAAGTTAATGATTCCAGGGCTGCTCAGGTTTGAGAATGATATCGAGGTTGGAGAGGAAGTTGTGCTGATGACTACCAAAGGAGAAGCCATTGCATTGGGAATTGCTGAGATGACCACTGCTGTGATGGCAACTTGTGATCATGGTGTGGTGGCAAAGATTAAGAGGGTGGTGATGGATCGGGATACTTACCCAAGAAAGTGGGGATTGGGACCGAGGGCATCCATGAAGAAGAAATTGATTGCCGAAGGGAAATTGGATAAGCATGGGAAGCCCACTGAGAATACTCCGCAAGAATGGATGAGGAATGTGGTTTTGCCTATTGGTGGGGATTCTATTGTTGCAAGCACTGCTGTGGCAGAGGAGACCACTCTCACAGACAAGGAGAAGAAGGATAAGAAAAAGAAGGACAAACATAAGGATGAAGAGGAAGCTAAGGAGGGGCGTAAGCGCAAACTAGAGGATGCCACAGAGAGCCCTGTTCCAGTTCCTGCGAAGAAAAGCAAAGGCGAAGAAGTTGAGCCTGAAGTTGAGAAGTCAGAAAAGAAAAAGAAGAAGAAAAAGGACAAAGAGAATGGCACCGTGGATAATGTTGAAGCTGGTTCACCTGAAGCAGAAAAGTCTGAGAAGAAGAAGAAGAAGAAGAAAAACAAAGACGCTGAGGACAATGGTACTGTGGCTACTGCCGGCGCTGCTGATGGCGAGGCTGATAAGAGTGAGAAAAAGAAGAAAAAGAAAAAGGGTAAAGCAGATGCAGAAGAAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000495 GO:0001522 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005732 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009506 GO:0009982 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016556 GO:0016853 GO:0016866 GO:0022613 GO:0030054 GO:0031118 GO:0031120 GO:0031123 GO:0031126 GO:0031429 GO:0031974 GO:0031981 GO:0032991 GO:0033979 GO:0034470 GO:0034641 GO:0034660 GO:0034964 GO:0040031 GO:0042254 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043628 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0055044 GO:0070013 GO:0071704 GO:0071840 GO:0072588 GO:0090304 GO:1901360 GO:1902494 GO:1990481 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

DKCLD PUA TruB_C_2 TruB_N

Protein Analysis

532

Amino Acids

59.05

Weight (kDa)

9.38

Isoelectric Point (pI)

33.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DKCLD	PF08068	13 - 70	3.1e-31	DKCLD (NUC011) domain
TruB_N	PF01509	74 - 190	8.4e-21	TruB family pseudouridylate synthase (N terminal domain)
TruB_C_2	PF16198	191 - 257	8.9e-27	tRNA pseudouridylate synthase B C-terminal domain
PUA	PF01472	261 - 334	9e-24	PUA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010475)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57150
fragaria_vesca	FvH4_5g20900 FvH4_5g20900 FvH4_5g20900
malus_domestica	MD06G1043100.v1.1 MD16G1267700.v1.1 MD16G1267900.v1.1
prunus_persica	Prupe.1G572500_v2.0.a1 Prupe.5G050000_v2.0.a1
pyrus_communis	pycom06g03610 pycom16g23720
rosa_chinensis	RchiOBHm_Chr7g0207911
rosa_laevigata	RLG00000003276
rosa_multiflora	Rmu_sc0006577.1_g000004
rosa_roxburghii	Rroxscaffold_3G00251050
rosa_rugosa	Rorug07G0100200
rosa_samantha	Rh7AG233600 Rh7BG229200 Rh7CG248900 Rh7DG239600
rosa_wichuraiana	Rw0G001290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	780
AasI	GACNNNNNNGTC	1 cut(s)	671
Acc65I	GGTACC	1 cut(s)	257
AccB1I	GGYRCC	3 cut(s)	257, 827, 1406
AciI	CCGC	4 cut(s)	73, 255, 364, 1118
AclWI	GGATC	4 cut(s)	260, 273, 656, 1014
AcoI	YGGCCR	1 cut(s)	247
AcuI	CTGAAG	2 cut(s)	1374, 1458
AdeI	CACNNNGTG	1 cut(s)	581
AfaI	GTAC	4 cut(s)	149, 259, 574, 1501
AfiI	CCNNNNNNNGG	5 cut(s)	45, 132, 423, 424, 1154
AflII	CTTAAG	1 cut(s)	128
AgsI	TTSAA	2 cut(s)	413, 1424
AhlI	ACTAGT	1 cut(s)	773
AjnI	CCWGG	2 cut(s)	261, 844
AleI	CACNNNNGTG	2 cut(s)	950, 1181
AluBI	AGCT	7 cut(s)	18, 377, 472, 502, 628, 1262, 1427
AluI	AGCT	7 cut(s)	18, 377, 472, 502, 628, 1262, 1427
Alw21I	GWGCWC	1 cut(s)	20
Alw26I	GTCTC	1 cut(s)	1187
AlwI	GGATC	4 cut(s)	260, 273, 656, 1014
AlwNI	CAGNNNCTG	1 cut(s)	1319
Ama87I	CYCGRG	1 cut(s)	402
AoxI	GGCC	5 cut(s)	47, 134, 247, 405, 440
ApaI	GGGCCC	1 cut(s)	409
ApeKI	GCWGC	3 cut(s)	469, 850, 1520
ArsI	GACNNNNNNTTYG	2 cut(s)	179, 211
Asp718I	GGTACC	1 cut(s)	257
AspLEI	GCGC	3 cut(s)	225, 1281, 1520
AspS9I	GGNCC	4 cut(s)	405, 406, 483, 1040
AsuHPI	GGTGA	3 cut(s)	668, 1012, 1425
AsuII	TTCGAA	1 cut(s)	85
AvaI	CYCGRG	1 cut(s)	402
AvaII	GGWCC	2 cut(s)	483, 1040
AxyI	CCTNAGG	2 cut(s)	112, 270
BaeGI	GKGCMC	1 cut(s)	409
BaeI	ACNNNNGTAYC	2 cut(s)	241, 274
BalI	TGGCCA	1 cut(s)	249
BamHI	GGATCC	1 cut(s)	265
BanI	GGYRCC	3 cut(s)	257, 827, 1406
BanII	GRGCYC	3 cut(s)	20, 409, 1307
BauI	CACGAG	1 cut(s)	200
Bbv12I	GWGCWC	1 cut(s)	20
BbvCI	CCTCAGC	1 cut(s)	1488
BbvI	GCAGC	3 cut(s)	481, 837, 1507
BccI	CCATC	4 cut(s)	494, 949, 997, 1520
BcgI	CGANNNNNNTGC	4 cut(s)	174, 191, 208, 225
BciT130I	CCWGG	2 cut(s)	263, 846
BciVI	GTATCC	1 cut(s)	1006
BclI	TGATCA	2 cut(s)	3, 967
BcoDI	GTCTC	1 cut(s)	1187
BcuI	ACTAGT	1 cut(s)	773
BfaI	CTAG	2 cut(s)	774, 1286
BfoI	RGCGCY	1 cut(s)	1521
BfrI	CTTAAG	1 cut(s)	128
BfuI	GTATCC	1 cut(s)	1006
BglI	GCCNNNNNGGC	1 cut(s)	398
BisI	GCNGC	3 cut(s)	470, 851, 1521
BlsI	GCNGC	3 cut(s)	471, 852, 1522
Bme1390I	CCNGG	2 cut(s)	263, 846
Bme18I	GGWCC	2 cut(s)	483, 1040
BmeT110I	CYCGRG	1 cut(s)	402
BmgT120I	GGNCC	4 cut(s)	405, 406, 483, 1040
BmiI	GGNNCC	7 cut(s)	259, 267, 407, 562, 829, 1041, 1408
BmrFI	CCNGG	2 cut(s)	263, 846
BmrI	ACTGGG	1 cut(s)	432
BmsI	GCATC	6 cut(s)	234, 505, 685, 1058, 1282, 1570
BmuI	ACTGGG	1 cut(s)	432
BplI	GAGNNNNNCTC	2 cut(s)	7, 39
Bpu10I	CCTNAGC	5 cut(s)	473, 629, 854, 1263, 1488
Bpu14I	TTCGAA	1 cut(s)	85
BpuEI	CTTGAG	2 cut(s)	527, 779
BsaI	GGTCTC	1 cut(s)	1187
BsaJI	CCNNGG	6 cut(s)	30, 261, 393, 845, 1043, 1410
BsaXI	ACNNNNNCTCC	2 cut(s)	873, 903
Bsc4I	CCNNNNNNNGG	5 cut(s)	45, 132, 423, 424, 1154
Bse118I	RCCGGY	1 cut(s)	1514
Bse1I	ACTGG	4 cut(s)	94, 250, 427, 1313
Bse21I	CCTNAGG	2 cut(s)	112, 270
Bse3DI	GCAATG	1 cut(s)	918
BseBI	CCWGG	2 cut(s)	263, 846
BseDI	CCNNGG	6 cut(s)	30, 261, 393, 845, 1043, 1410
BseGI	GGATG	8 cut(s)	150, 225, 700, 730, 1049, 1134, 1255, 1297
BseLI	CCNNNNNNNGG	5 cut(s)	45, 132, 423, 424, 1154
BseMI	GCAATG	1 cut(s)	918
BseNI	ACTGG	4 cut(s)	94, 250, 427, 1313
BseRI	GAGGAG	3 cut(s)	93, 754, 1205
BseSI	GKGCMC	1 cut(s)	409
BseXI	GCAGC	3 cut(s)	481, 837, 1507
BseYI	CCCAGC	1 cut(s)	327
BsgI	GTGCAG	1 cut(s)	357
BshFI	GGCC	5 cut(s)	49, 136, 249, 407, 442
BshNI	GGYRCC	3 cut(s)	257, 827, 1406
BsiHKAI	GWGCWC	1 cut(s)	20
BsiHKCI	CYCGRG	1 cut(s)	402
BsiSI	CCGG	1 cut(s)	1515
BslFI	GGGAC	2 cut(s)	310, 1053
BslI	CCNNNNNNNGG	5 cut(s)	45, 132, 423, 424, 1154
BsmAI	GTCTC	1 cut(s)	1187
BsmFI	GGGAC	2 cut(s)	310, 1053
BsmI	GAATGC	2 cut(s)	370, 817
BsnI	GGCC	5 cut(s)	49, 136, 249, 407, 442
Bso31I	GGTCTC	1 cut(s)	1187
BsoBI	CYCGRG	1 cut(s)	402
Bsp119I	TTCGAA	1 cut(s)	85
Bsp120I	GGGCCC	1 cut(s)	405
Bsp1286I	GDGCHC	3 cut(s)	20, 409, 1307
Bsp143I	GATC	5 cut(s)	3, 265, 648, 967, 1006
BspACI	CCGC	4 cut(s)	73, 255, 364, 1118
BspANI	GGCC	5 cut(s)	49, 136, 249, 407, 442
BspLI	GGNNCC	7 cut(s)	259, 267, 407, 562, 829, 1041, 1408
BspPI	GGATC	4 cut(s)	260, 273, 656, 1014
BspT104I	TTCGAA	1 cut(s)	85
BspT107I	GGYRCC	3 cut(s)	257, 827, 1406
BspTI	CTTAAG	1 cut(s)	128
BspTNI	GGTCTC	1 cut(s)	1187
BsrDI	GCAATG	1 cut(s)	918
BsrFI	RCCGGY	1 cut(s)	1514
BsrI	ACTGG	4 cut(s)	94, 250, 427, 1313
BssAI	RCCGGY	1 cut(s)	1514
BssECI	CCNNGG	6 cut(s)	30, 261, 393, 845, 1043, 1410
BssMI	GATC	5 cut(s)	3, 265, 648, 967, 1006
BssSI	CACGAG	1 cut(s)	200
BssT1I	CCWWGG	2 cut(s)	30, 393
Bst2BI	CACGAG	1 cut(s)	200
Bst2UI	CCWGG	2 cut(s)	263, 846
Bst4CI	ACNGT	3 cut(s)	827, 1411, 1504
Bst6I	CTCTTC	1 cut(s)	1248
BstAFI	CTTAAG	1 cut(s)	128
BstAPI	GCANNNNNTGC	2 cut(s)	812, 1178
BstBI	TTCGAA	1 cut(s)	85
BstC8I	GCNNGC	6 cut(s)	183, 364, 368, 500, 1174, 1516
BstDSI	CCRYGG	1 cut(s)	1410
BstF5I	GGATG	8 cut(s)	150, 225, 700, 730, 1049, 1134, 1255, 1297
BstH2I	RGCGCY	1 cut(s)	1521
BstHHI	GCGC	3 cut(s)	225, 1281, 1520
BstKTI	GATC	5 cut(s)	6, 268, 651, 970, 1009
BstMAI	GTCTC	1 cut(s)	1187
BstMBI	GATC	5 cut(s)	3, 265, 648, 967, 1006
BstMWI	GCNNNNNNNGC	7 cut(s)	398, 704, 812, 956, 1099, 1178, 1520
BstNI	CCWGG	2 cut(s)	263, 846
BstSCI	CCNGG	2 cut(s)	261, 844
BstSLI	GKGCMC	1 cut(s)	409
BstV1I	GCAGC	3 cut(s)	481, 837, 1507
BstX2I	RGATCY	1 cut(s)	265
BstXI	CCANNNNNNTGG	2 cut(s)	925, 1029
BstYI	RGATCY	1 cut(s)	265
Bsu36I	CCTNAGG	2 cut(s)	112, 270
BsuI	GTATCC	1 cut(s)	1006
BsuRI	GGCC	5 cut(s)	49, 136, 249, 407, 442
BtgI	CCRYGG	1 cut(s)	1410
BtsCI	GGATG	8 cut(s)	150, 225, 700, 730, 1049, 1134, 1255, 1297
BtsI	GCAGTG	3 cut(s)	813, 945, 1176
BtsIMutI	CAGTG	6 cut(s)	50, 707, 813, 945, 1104, 1176
Cac8I	GCNNGC	6 cut(s)	183, 364, 368, 500, 1174, 1516
CaiI	CAGNNNCTG	1 cut(s)	1319
CfoI	GCGC	3 cut(s)	225, 1281, 1520
Cfr10I	RCCGGY	1 cut(s)	1514
Cfr13I	GGNCC	4 cut(s)	405, 406, 483, 1040
CseI	GACGC	1 cut(s)	1493
Csp6I	GTAC	4 cut(s)	148, 258, 573, 1500
CspCI	CAANNNNNGTGG	2 cut(s)	298, 333
CviAII	CATG	8 cut(s)	652, 670, 683, 691, 751, 971, 1054, 1094
CviQI	GTAC	4 cut(s)	148, 258, 573, 1500
DpnI	GATC	5 cut(s)	5, 267, 650, 969, 1008
DpnII	GATC	5 cut(s)	3, 265, 648, 967, 1006
DraIII	CACNNNGTG	1 cut(s)	581
DrdI	GACNNNNNNGTC	1 cut(s)	671
DseDI	GACNNNNNNGTC	1 cut(s)	671
EaeI	YGGCCR	1 cut(s)	247
Eam1104I	CTCTTC	1 cut(s)	1248
EarI	CTCTTC	1 cut(s)	1248
Ecl136II	GAGCTC	1 cut(s)	18
Eco130I	CCWWGG	2 cut(s)	30, 393
Eco147I	AGGCCT	1 cut(s)	136
Eco24I	GRGCYC	3 cut(s)	20, 409, 1307
Eco31I	GGTCTC	1 cut(s)	1187
Eco32I	GATATC	2 cut(s)	453, 871
Eco47I	GGWCC	2 cut(s)	483, 1040
Eco53kI	GAGCTC	1 cut(s)	18
Eco57I	CTGAAG	2 cut(s)	1374, 1458
Eco81I	CCTNAGG	2 cut(s)	112, 270
Eco88I	CYCGRG	1 cut(s)	402
EcoICRI	GAGCTC	1 cut(s)	18
EcoO109I	RGGNCCY	1 cut(s)	406
EcoRII	CCWGG	2 cut(s)	261, 844
EcoRV	GATATC	2 cut(s)	453, 871
EcoT14I	CCWWGG	2 cut(s)	30, 393
EcoT22I	ATGCAT	1 cut(s)	684
EcoT38I	GRGCYC	3 cut(s)	20, 409, 1307
ErhI	CCWWGG	2 cut(s)	30, 393
FaeI	CATG	8 cut(s)	655, 673, 686, 694, 754, 974, 1057, 1097
FaqI	GGGAC	2 cut(s)	310, 1053
FatI	CATG	8 cut(s)	651, 669, 682, 690, 750, 970, 1053, 1093
FauI	CCCGC	1 cut(s)	371
FauNDI	CATATG	1 cut(s)	618
FbaI	TGATCA	2 cut(s)	3, 967
Fnu4HI	GCNGC	3 cut(s)	470, 851, 1521
FokI	GGATG	8 cut(s)	137, 212, 707, 737, 1036, 1141, 1262, 1304
FriOI	GRGCYC	3 cut(s)	20, 409, 1307
Fsp4HI	GCNGC	3 cut(s)	470, 851, 1521
FspBI	CTAG	2 cut(s)	774, 1286
GlaI	GCGC	3 cut(s)	224, 1280, 1519
GluI	GCNGC	3 cut(s)	470, 851, 1521
GsaI	CCCAGC	1 cut(s)	331
HaeII	RGCGCY	1 cut(s)	1521
HaeIII	GGCC	5 cut(s)	49, 136, 249, 407, 442
HapII	CCGG	1 cut(s)	1515
HgaI	GACGC	1 cut(s)	1493
HhaI	GCGC	3 cut(s)	225, 1281, 1520
Hin1II	CATG	8 cut(s)	655, 673, 686, 694, 754, 974, 1057, 1097
Hin6I	GCGC	3 cut(s)	223, 1279, 1518
HinP1I	GCGC	3 cut(s)	223, 1279, 1518
HindIII	AAGCTT	1 cut(s)	500
HinfI	GANTC	4 cut(s)	413, 800, 841, 1160
HpaII	CCGG	1 cut(s)	1515
HphI	GGTGA	3 cut(s)	668, 1012, 1425
Hpy166II	GTNNAC	2 cut(s)	575, 1433
Hpy188I	TCNGA	4 cut(s)	155, 438, 1369, 1453
Hpy188III	TCNNGA	6 cut(s)	173, 506, 541, 758, 769, 1010
Hpy8I	GTNNAC	2 cut(s)	575, 1433
Hpy99I	CGWCG	1 cut(s)	199
HpyAV	CCTTC	4 cut(s)	239, 1070, 1213, 1228
HpyCH4III	ACNGT	3 cut(s)	827, 1411, 1504
HpyF10VI	GCNNNNNNNGC	7 cut(s)	398, 704, 812, 956, 1099, 1178, 1520
Hsp92II	CATG	8 cut(s)	655, 673, 686, 694, 754, 974, 1057, 1097
HspAI	GCGC	3 cut(s)	223, 1279, 1518
KpnI	GGTACC	1 cut(s)	261
KroI	GCCGGC	1 cut(s)	1514
KroNI	GCCGGC	1 cut(s)	1516
Ksp22I	TGATCA	2 cut(s)	3, 967
Kzo9I	GATC	5 cut(s)	3, 265, 648, 967, 1006
LmnI	GCTCC	1 cut(s)	625
Lsp1109I	GCAGC	3 cut(s)	481, 837, 1507
LweI	GCATC	6 cut(s)	234, 505, 685, 1058, 1282, 1570
MaeI	CTAG	2 cut(s)	774, 1286
MaeIII	GTNAC	2 cut(s)	274, 673
MalI	GATC	5 cut(s)	5, 267, 650, 969, 1008
MboI	GATC	5 cut(s)	3, 265, 648, 967, 1006
MflI	RGATCY	1 cut(s)	265
MhlI	GDGCHC	3 cut(s)	20, 409, 1307
MlsI	TGGCCA	1 cut(s)	249
MluCI	AATT	3 cut(s)	930, 1064, 1082
MluNI	TGGCCA	1 cut(s)	249
MlyI	GAGTC	1 cut(s)	794
MmeI	TCCRAC	1 cut(s)	859
Mox20I	TGGCCA	1 cut(s)	249
Mph1103I	ATGCAT	1 cut(s)	684
MroNI	GCCGGC	1 cut(s)	1514
MscI	TGGCCA	1 cut(s)	249
MseI	TTAA	5 cut(s)	60, 129, 219, 836, 990
MslI	CAYNNNNRTG	3 cut(s)	950, 1181, 1248
Msp20I	TGGCCA	1 cut(s)	249
MspA1I	CMGCKG	2 cut(s)	255, 377
MspCI	CTTAAG	1 cut(s)	128
MspI	CCGG	1 cut(s)	1515
MspR9I	CCNGG	2 cut(s)	263, 846
Mva1269I	GAATGC	2 cut(s)	370, 817
MvaI	CCWGG	2 cut(s)	263, 846
MwoI	GCNNNNNNNGC	7 cut(s)	398, 704, 812, 956, 1099, 1178, 1520
NaeI	GCCGGC	1 cut(s)	1516
NdeI	CATATG	1 cut(s)	618
NdeII	GATC	5 cut(s)	3, 265, 648, 967, 1006
NgoMIV	GCCGGC	1 cut(s)	1514
NlaIII	CATG	8 cut(s)	655, 673, 686, 694, 754, 974, 1057, 1097
NlaIV	GGNNCC	7 cut(s)	259, 267, 407, 562, 829, 1041, 1408
NmuCI	GTSAC	1 cut(s)	673
NsiI	ATGCAT	1 cut(s)	684
NspV	TTCGAA	1 cut(s)	85
OliI	CACNNNNGTG	2 cut(s)	950, 1181
PceI	AGGCCT	1 cut(s)	136
PctI	GAATGC	2 cut(s)	370, 817
PdiI	GCCGGC	1 cut(s)	1516
PfeI	GAWTC	3 cut(s)	413, 841, 1160
PkrI	GCNGC	3 cut(s)	471, 852, 1522
PleI	GAGTC	1 cut(s)	794
PpsI	GAGTC	1 cut(s)	794
PsiI	TTATAA	1 cut(s)	780
Psp124BI	GAGCTC	1 cut(s)	20
Psp6I	CCWGG	2 cut(s)	261, 844
PspFI	CCCAGC	1 cut(s)	327
PspGI	CCWGG	2 cut(s)	261, 844
PspN4I	GGNNCC	7 cut(s)	259, 267, 407, 562, 829, 1041, 1408
PspOMI	GGGCCC	1 cut(s)	405
PspPI	GGNCC	4 cut(s)	405, 406, 483, 1040
PstNI	CAGNNNCTG	1 cut(s)	1319
PsuI	RGATCY	1 cut(s)	265
PvuII	CAGCTG	1 cut(s)	377
RsaI	GTAC	4 cut(s)	149, 259, 574, 1501
RsaNI	GTAC	4 cut(s)	148, 258, 573, 1500
RseI	CAYNNNNRTG	3 cut(s)	950, 1181, 1248
SacI	GAGCTC	1 cut(s)	20
SaqAI	TTAA	5 cut(s)	60, 129, 219, 836, 990
SatI	GCNGC	3 cut(s)	470, 851, 1521
Sau3AI	GATC	5 cut(s)	3, 265, 648, 967, 1006
Sau96I	GGNCC	4 cut(s)	405, 406, 483, 1040
SchI	GAGTC	1 cut(s)	794
ScrFI	CCNGG	2 cut(s)	263, 846
SduI	GDGCHC	3 cut(s)	20, 409, 1307
SfaNI	GCATC	6 cut(s)	234, 505, 685, 1058, 1282, 1570
SfuI	TTCGAA	1 cut(s)	85
SinI	GGWCC	2 cut(s)	483, 1040
SmiMI	CAYNNNNRTG	3 cut(s)	950, 1181, 1248
SmlI	CTYRAG	3 cut(s)	128, 506, 758
SmoI	CTYRAG	3 cut(s)	128, 506, 758
SpeI	ACTAGT	1 cut(s)	773
Sse9I	AATT	3 cut(s)	930, 1064, 1082
SseBI	AGGCCT	1 cut(s)	136
SsiI	CCGC	4 cut(s)	73, 255, 364, 1118
SspMI	CTAG	2 cut(s)	774, 1286
SstI	GAGCTC	1 cut(s)	20
StuI	AGGCCT	1 cut(s)	136
StyD4I	CCNGG	2 cut(s)	261, 844
StyI	CCWWGG	2 cut(s)	30, 393
TaaI	ACNGT	3 cut(s)	827, 1411, 1504
TaqI	TCGA	2 cut(s)	85, 873
TaqII	GACCGA	2 cut(s)	318, 1057
TasI	AATT	3 cut(s)	930, 1064, 1082
TatI	WGTACW	1 cut(s)	147
TfiI	GAWTC	3 cut(s)	413, 841, 1160
Tru1I	TTAA	5 cut(s)	60, 129, 219, 836, 990
Tru9I	TTAA	5 cut(s)	60, 129, 219, 836, 990
TscAI	CASTG	6 cut(s)	50, 707, 813, 952, 1111, 1183
TseFI	GTSAC	1 cut(s)	673
TseI	GCWGC	3 cut(s)	469, 850, 1520
Tsp45I	GTSAC	1 cut(s)	673
TspDTI	ATGAA	3 cut(s)	507, 1070, 1266
TspRI	CASTG	6 cut(s)	50, 707, 813, 952, 1111, 1183
Vha464I	CTTAAG	1 cut(s)	128
VpaK11BI	GGWCC	2 cut(s)	483, 1040
XcmI	CCANNNNNNNNNTGG	1 cut(s)	952
XspI	CTAG	2 cut(s)	774, 1286
Zsp2I	ATGCAT	1 cut(s)	684

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.