Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0016717

Physical Location & Seq

Genomic Coordinates Reverse (-)

21255557 .. 21258488

Gene Structure 2932 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G57430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2673 bp

ATGTCATGTCCTCTTGCCTTCACCTTCTCTCTCCCGTCTATTTTCCCCTTTCCTTCTCAACTGCTTCCATTTTCCCGCCATAAACATCCTTATCTTCTTCGCGCCACACCAACCTCTGCAACCGAAGATGTTGCCTCCGCCGTTTCTGGCGCACCTTCAATATTTATCTCTCAATCACGCTCTCCGGAGTGGTGGATTGACTTGCTCCGGTCCAAAGTTCGATCTAATTTGCTCCGTGAAGCTGTTTTGACTTACGTTGACATGATTGTTTTGGGTATAAAACCCGATAATTATGCGTTCCCTGCTTTGCTAAAGGCTGTAGCAGATCTTCAGGACATGGAACTGGGGAAACAGATTCATGCCCATGTGTATAAATTTGGGTACGGTGTGGATTCCGTGACTGTGGCTAATACCCTTGTGAATTTGTATAGAAAGTGTGGAGATTTCGGAGCTGTCTATAAGGTGTTCGATAGAATATCTGAGAGAAACCAAGTCTCTTGGAATTCTTTAATTTCTTCTTTGTGTAGTTTTGAGAAGTGGGAAATGGCGTTAGAGGCATTTCGGTGTATGTTGGATGAAAATGTGGAACCTAGTTCGTTTACCTTGGTGAGTGTGGTTACTGCTTGTTCGAATTTGCCTATGCCTGAGGGATTAATGATGGGTAAGCAGGTTCACGCCTATGGTTTGAGAAAGGGTGAATTGAATTCGTTTATAATCAACACATTGGTGGCTATGTATGGTAAACTGGGAAAATTAGCATCTTCTAAAGTCTTACTTGGTTCTTTTGGAGGCCGTGACTTGGTCACATGGAACACTGTGTTGAGCTCGTTATGTCAGAACGAGCAGTTGCTTGAAGCATTGGAATATTTGCGTGAAATGGTGCTTGAAGGTGTTGAACCAGATGAGTTCACTATTTCAAGTGTTCTTCCTGCTTGTTCACACTTGGAGATGCTTCGCACAGGGAAAGAATTGCATGCTTATGCTTTGAAAAATGGCTCTTTGGATGAGAATTCCTTTGTTGGTAGTGCTTTGGTTGACATGTATTGCAATTGCAAGCAAGTGTTGAGTGGTCGTCGAGTATTTGATGGAATGTTTGATAGAAAGATTGGTCTGTGGAATGCTATGATCGCTGGGTATTCCCAGAATGAGCATGACAAGGAAGCGTTGTTGCTTTTCATTGGAATGGAAGAAAGTGCTGGGCTTCTGGCTAACTCTACCACAATGGCAGGTGTTGTTCCTGCTTGTGTCCGTTCTGGTGCGTTCTCTAGAAAGGAAGCTATCCATGGATTTGTTGTGAAGAGAGGTTTAGATAGAGACAGGTTTGTGCAGAATACACTGATGGATATGTATTCTAGGCTGGGAAAGATCGATATCGCCATGCGGATATTCGGTAAAATGGAAGATAGAGATTTAGTTACGTGGAACACGATGATTACGGGTTATGTATTCTCAGAACACCATGAGGACGCACTTCTCCTGCTACACAAGATGCAAAACCTTGAAAGAAAAGTGAGCAAGGGGGCTAGCCGAGTTAGTCTTAAACCTAATTCCATCACTCTGATGACAATCCTTCCCAGTTGTGCTGCACTATCAGCATTAGCAAAAGGAAAAGAAATTCATGCTTATGCCATCAAGAACAATTTGGCAACTGATGTGGCTGTCGGAAGCGCTTTAGTTGACATGTACGCAAAATGCGGGTGCCTACAGATGTCGAGAAAAGTGTTTGATCAGATTCCACAAAAAAATGTTATTACTTGGAATGTGATTATAATGGCTTACGGGATGCATGGAAACGGTCAAGAAGCCATAGATCTGCTAAGAATGATGATGGTTCAGGGAGTAAAACCAAACGAGGTTACATTCATCTCAGTATTTGCAGCTTGTAGCCACTCAGGCATGGTGGATGAAGGATTAAGGATATTCTATGTTATGAAACCCGACTACGGGGTTGAACCAAGCTCAGATCATTATGCTTGTGTTGTAGATTTGCTTGGAAGGGCTGGTAGAATTAAAGAAGCATATCAACTCATGAATATGATGCCTCGTGATTTCAACAAAGCTGGAGCATGGAGTAGCCTCCTTGGTGCCAGTCGGATTCACAATAACCTAGAAATTGGAGAAATTGCTGCTCAAAATCTCATTCAACTGGAACCAAATGTAGCTAGTCACTATGTGTTACTTGCCAATATTTATTCATCAGCAGGCCTCTGGGATAAAGCAACAGAGGTAAGAAGAAATATGAAAGAGCAAGGCGTGAGAAAAGAACCTGGATGTAGCTGGATTGAGCATGGCGATGAAGTACATAAATTTGTAGCCGGTGACTCATCTCACCCGCAAAGCGAAAAGCTCAGTGGATATCTCGAGACATTGTGGGAGAGAATGAGAAAAGAAGGATATGTACCTGACACATCTTGTGTACTCCACAATGTAGAGGAAGATGAAAAAGAGATTCTGCTTTGTGGACACAGTGAGAAGCTAGCAATTGCGTTTGGGATACTTAACACATCACCCGGTACAATTATTAGGGTGGCTAAAAACCTCAGGGTTTGTAATGATTGTCATCTTGCAACCAAGTTTATCTCAAAGATTGTTGATAGAGAAATCATCTTGAGAGATGTTAGGAGGTTTCATCGTTTCAAGAATGGAACTTGCTCCTGTGGAGACTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

890

Amino Acids

99.27

Weight (kDa)

6.94

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	163 - 210	1.1e-08	PPR repeat family
PPR	PF01535	165 - 195	5.8e-06	PPR repeat
PPR_2	PF13041	266 - 313	5e-11	PPR repeat family
PPR	PF01535	268 - 298	1e-06	PPR repeat
PPR_2	PF13041	581 - 629	8.2e-11	PPR repeat family
PPR	PF01535	584 - 614	9.4e-06	PPR repeat
E_motif	PF20431	700 - 762	1e-21	E motif
DYW_deaminase	PF14432	798 - 890	5.5e-43	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016717)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57430
fragaria_vesca	FvH4_3g13090
malus_domestica	MD10G1226400.v1.1
prunus_persica	Prupe.1G101200_v2.0.a1
pyrus_communis	pycom10g19030
rosa_chinensis	RchiOBHm_Chr5g0021321
rosa_laevigata	RLG00000032604
rosa_multiflora	Rmu_co8520529.1_g000003 Rmu_sc0003392.1_g000007 Rmu_sc0004847.1_g000016
rosa_rugosa	Rorug05G0066300
rosa_samantha	Rh5BG154900 Rh5CG168400
rosa_wichuraiana	Rw5G013850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	713, 1769
AarI	CACCTGC	1 cut(s)	1217
Acc36I	ACCTGC	2 cut(s)	658, 1217
AccB1I	GGYRCC	2 cut(s)	1698, 2084
AccII	CGCG	1 cut(s)	102
AccIII	TCCGGA	1 cut(s)	184
AciI	CCGC	5 cut(s)	76, 138, 1381, 1695, 2333
AcsI	RAATTY	8 cut(s)	374, 421, 502, 631, 703, 1009, 1614, 2306
AcuI	CTGAAG	1 cut(s)	314
AdeI	CACNNNGTG	1 cut(s)	2173
AfaI	GTAC	6 cut(s)	383, 1685, 2301, 2400, 2418, 2515
AfeI	AGCGCT	1 cut(s)	1669
AfiI	CCNNNNNNNGG	3 cut(s)	799, 1943, 1944
AflIII	ACRYGT	2 cut(s)	1038, 1680
AjnI	CCWGG	1 cut(s)	2266
AleI	CACNNNNGTG	1 cut(s)	725
Alw21I	GWGCWC	1 cut(s)	827
Alw26I	GTCTC	4 cut(s)	499, 1308, 2357, 2655
Ama87I	CYCGRG	1 cut(s)	2360
Aor13HI	TCCGGA	1 cut(s)	184
Aor51HI	AGCGCT	1 cut(s)	1669
AoxI	GGCC	2 cut(s)	790, 2203
ApeKI	GCWGC	3 cut(s)	1583, 1877, 2126
ApoI	RAATTY	8 cut(s)	374, 421, 502, 631, 703, 1009, 1614, 2306
AseI	ATTAAT	1 cut(s)	653
AspLEI	GCGC	3 cut(s)	104, 152, 1670
AspS9I	GGNCC	1 cut(s)	210
AsuC2I	CCSGG	1 cut(s)	2511
AsuHPI	GGTGA	6 cut(s)	13, 619, 707, 2321, 2330, 2499
AsuII	TTCGAA	1 cut(s)	629
AsuNHI	GCTAGC	2 cut(s)	1523, 2476
AvaI	CYCGRG	1 cut(s)	2360
AvaII	GGWCC	1 cut(s)	210
AxyI	CCTNAGG	2 cut(s)	645, 2540
BanI	GGYRCC	2 cut(s)	1698, 2084
BanII	GRGCYC	1 cut(s)	827
BarI	GAAGNNNNNNTAC	4 cut(s)	312, 344, 2382, 2414
BauI	CACGAG	1 cut(s)	2043
Bbv12I	GWGCWC	1 cut(s)	827
BbvI	GCAGC	3 cut(s)	1570, 1889, 2113
BccI	CCATC	6 cut(s)	652, 1079, 1333, 1559, 1637, 1822
BceAI	ACGGC	2 cut(s)	125, 777
BcgI	CGANNNNNNTGC	4 cut(s)	113, 147, 275, 309
BciT130I	CCWGG	1 cut(s)	2268
BciVI	GTATCC	1 cut(s)	2487
BclI	TGATCA	1 cut(s)	1726
BcnI	CCSGG	1 cut(s)	2511
BcoDI	GTCTC	4 cut(s)	499, 1308, 2357, 2655
BfaI	CTAG	7 cut(s)	591, 1266, 1353, 1524, 2108, 2163, 2477
BfmI	CTRYAG	2 cut(s)	318, 1703
BfoI	RGCGCY	1 cut(s)	1671
BfuAI	ACCTGC	2 cut(s)	658, 1217
BfuI	GTATCC	1 cut(s)	2487
BglI	GCCNNNNNGGC	1 cut(s)	1893
BglII	AGATCT	2 cut(s)	325, 1810
BisI	GCNGC	3 cut(s)	1584, 1878, 2127
BlsI	GCNGC	3 cut(s)	1585, 1879, 2128
Bme1390I	CCNGG	2 cut(s)	2268, 2511
Bme18I	GGWCC	1 cut(s)	210
BmeT110I	CYCGRG	1 cut(s)	2360
BmgT120I	GGNCC	1 cut(s)	210
BmiI	GGNNCC	4 cut(s)	588, 1700, 2086, 2151
BmrFI	CCNGG	2 cut(s)	2268, 2511
BmrI	ACTGGG	3 cut(s)	353, 755, 1569
BmsI	GCATC	5 cut(s)	767, 939, 1479, 1773, 2028
BmtI	GCTAGC	2 cut(s)	1527, 2480
BmuI	ACTGGG	3 cut(s)	353, 755, 1569
BpmI	CTGGAG	1 cut(s)	2082
Bpu14I	TTCGAA	1 cut(s)	629
BpuEI	CTTGAG	1 cut(s)	2629
BpuMI	CCSGG	1 cut(s)	2511
Bsa29I	ATCGAT	1 cut(s)	1368
BsaAI	YACGTR	1 cut(s)	1419
BsaBI	GATNNNNATC	3 cut(s)	1370, 1565, 2559
BsaJI	CCNNGG	3 cut(s)	603, 1282, 2080
BsaWI	WCCGGW	2 cut(s)	184, 207
Bsc4I	CCNNNNNNNGG	3 cut(s)	799, 1943, 1944
Bse118I	RCCGGY	1 cut(s)	2315
Bse1I	ACTGG	5 cut(s)	348, 750, 1575, 2088, 2151
Bse21I	CCTNAGG	2 cut(s)	645, 2540
Bse8I	GATNNNNATC	3 cut(s)	1370, 1565, 2559
BseAI	TCCGGA	1 cut(s)	184
BseBI	CCWGG	1 cut(s)	2268
BseCI	ATCGAT	1 cut(s)	1368
BseDI	CCNNGG	3 cut(s)	603, 1282, 2080
BseGI	GGATG	6 cut(s)	85, 580, 1009, 1788, 1909, 2276
BseJI	GATNNNNATC	3 cut(s)	1370, 1565, 2559
BseLI	CCNNNNNNNGG	3 cut(s)	799, 1943, 1944
BseMII	CTCAG	8 cut(s)	471, 636, 1464, 1881, 1905, 1974, 2362, 2554
BseNI	ACTGG	5 cut(s)	348, 750, 1575, 2088, 2151
BseXI	GCAGC	3 cut(s)	1570, 1889, 2113
BseYI	CCCAGC	3 cut(s)	1130, 1196, 1357
BsgI	GTGCAG	2 cut(s)	1346, 1569
Bsh1236I	CGCG	1 cut(s)	102
BshFI	GGCC	2 cut(s)	792, 2205
BshNI	GGYRCC	2 cut(s)	1698, 2084
BshVI	ATCGAT	1 cut(s)	1368
BsiHKAI	GWGCWC	1 cut(s)	827
BsiHKCI	CYCGRG	1 cut(s)	2360
BsiSI	CCGG	4 cut(s)	185, 208, 2316, 2511
BslI	CCNNNNNNNGG	3 cut(s)	799, 1943, 1944
BsmAI	GTCTC	4 cut(s)	499, 1308, 2357, 2655
BsmI	GAATGC	1 cut(s)	1123
BsnI	GGCC	2 cut(s)	792, 2205
BsoBI	CYCGRG	1 cut(s)	2360
Bsp119I	TTCGAA	1 cut(s)	629
Bsp1286I	GDGCHC	1 cut(s)	827
Bsp13I	TCCGGA	1 cut(s)	184
Bsp143I	GATC	7 cut(s)	221, 325, 1125, 1365, 1726, 1810, 1963
Bsp19I	CCATGG	1 cut(s)	1282
BspACI	CCGC	5 cut(s)	76, 138, 1381, 1695, 2333
BspANI	GGCC	2 cut(s)	792, 2205
BspCNI	CTCAG	8 cut(s)	472, 637, 1463, 1880, 1904, 1973, 2361, 2553
BspDI	ATCGAT	1 cut(s)	1368
BspEI	TCCGGA	1 cut(s)	184
BspFNI	CGCG	1 cut(s)	102
BspHI	TCATGA	1 cut(s)	2028
BspLI	GGNNCC	4 cut(s)	588, 1700, 2086, 2151
BspMI	ACCTGC	2 cut(s)	658, 1217
BspOI	GCTAGC	2 cut(s)	1527, 2480
BspT104I	TTCGAA	1 cut(s)	629
BspT107I	GGYRCC	2 cut(s)	1698, 2084
BsrFI	RCCGGY	1 cut(s)	2315
BsrI	ACTGG	5 cut(s)	348, 750, 1575, 2088, 2151
BssAI	RCCGGY	1 cut(s)	2315
BssECI	CCNNGG	3 cut(s)	603, 1282, 2080
BssMI	GATC	7 cut(s)	221, 325, 1125, 1365, 1726, 1810, 1963
BssSI	CACGAG	1 cut(s)	2043
BssT1I	CCWWGG	3 cut(s)	603, 1282, 2080
Bst2BI	CACGAG	1 cut(s)	2043
Bst2UI	CCWGG	1 cut(s)	2268
Bst4CI	ACNGT	5 cut(s)	386, 403, 817, 1796, 2468
Bst6I	CTCTTC	1 cut(s)	1292
BstBAI	YACGTR	1 cut(s)	1419
BstBI	TTCGAA	1 cut(s)	629
BstC8I	GCNNGC	5 cut(s)	975, 1055, 1525, 2203, 2478
BstDEI	CTNAG	9 cut(s)	480, 645, 1450, 1817, 1867, 1891, 1960, 2348, 2540
BstDSI	CCRYGG	1 cut(s)	1282
BstF5I	GGATG	6 cut(s)	85, 580, 1009, 1788, 1909, 2276
BstFNI	CGCG	1 cut(s)	102
BstH2I	RGCGCY	1 cut(s)	1671
BstHHI	GCGC	3 cut(s)	104, 152, 1670
BstKTI	GATC	7 cut(s)	224, 328, 1128, 1368, 1729, 1813, 1966
BstMAI	GTCTC	4 cut(s)	499, 1308, 2357, 2655
BstMBI	GATC	7 cut(s)	221, 325, 1125, 1365, 1726, 1810, 1963
BstMWI	GCNNNNNNNGC	5 cut(s)	302, 554, 1127, 1592, 1893
BstNI	CCWGG	1 cut(s)	2268
BstNSI	RCATGY	3 cut(s)	977, 1042, 1684
BstSCI	CCNGG	2 cut(s)	2266, 2509
BstSFI	CTRYAG	2 cut(s)	318, 1703
BstUI	CGCG	1 cut(s)	102
BstV1I	GCAGC	3 cut(s)	1570, 1889, 2113
BstX2I	RGATCY	2 cut(s)	325, 1810
BstYI	RGATCY	2 cut(s)	325, 1810
Bsu15I	ATCGAT	1 cut(s)	1368
Bsu36I	CCTNAGG	2 cut(s)	645, 2540
BsuI	GTATCC	1 cut(s)	2487
BsuRI	GGCC	2 cut(s)	792, 2205
BsuTUI	ATCGAT	1 cut(s)	1368
BtgI	CCRYGG	1 cut(s)	1282
BtgZI	GCGATG	1 cut(s)	2307
BtsCI	GGATG	6 cut(s)	85, 580, 1009, 1788, 1909, 2276
BtsIMutI	CAGTG	4 cut(s)	813, 1334, 2356, 2473
BveI	ACCTGC	2 cut(s)	658, 1217
Cac8I	GCNNGC	5 cut(s)	975, 1055, 1525, 2203, 2478
CciI	TCATGA	1 cut(s)	2028
CfoI	GCGC	3 cut(s)	104, 152, 1670
Cfr10I	RCCGGY	1 cut(s)	2315
Cfr13I	GGNCC	1 cut(s)	210
ClaI	ATCGAT	1 cut(s)	1368
CseI	GACGC	1 cut(s)	1475
Csp6I	GTAC	6 cut(s)	382, 1684, 2300, 2399, 2417, 2514
CspCI	CAANNNNNGTGG	2 cut(s)	1635, 1670
CviQI	GTAC	6 cut(s)	382, 1684, 2300, 2399, 2417, 2514
DdeI	CTNAG	9 cut(s)	480, 645, 1450, 1817, 1867, 1891, 1960, 2348, 2540
DpnI	GATC	7 cut(s)	223, 327, 1127, 1367, 1728, 1812, 1965
DpnII	GATC	7 cut(s)	221, 325, 1125, 1365, 1726, 1810, 1963
DraIII	CACNNNGTG	1 cut(s)	2173
Eam1104I	CTCTTC	1 cut(s)	1292
EarI	CTCTTC	1 cut(s)	1292
EciI	GGCGGA	1 cut(s)	127
Ecl136II	GAGCTC	1 cut(s)	825
Eco130I	CCWWGG	3 cut(s)	603, 1282, 2080
Eco147I	AGGCCT	1 cut(s)	2205
Eco24I	GRGCYC	1 cut(s)	827
Eco32I	GATATC	2 cut(s)	1372, 2357
Eco47I	GGWCC	1 cut(s)	210
Eco47III	AGCGCT	1 cut(s)	1669
Eco53kI	GAGCTC	1 cut(s)	825
Eco57I	CTGAAG	1 cut(s)	314
Eco81I	CCTNAGG	2 cut(s)	645, 2540
Eco88I	CYCGRG	1 cut(s)	2360
EcoICRI	GAGCTC	1 cut(s)	825
EcoRI	GAATTC	3 cut(s)	502, 703, 1009
EcoRII	CCWGG	1 cut(s)	2266
EcoRV	GATATC	2 cut(s)	1372, 2357
EcoT14I	CCWWGG	3 cut(s)	603, 1282, 2080
EcoT22I	ATGCAT	1 cut(s)	1788
EcoT38I	GRGCYC	1 cut(s)	827
ErhI	CCWWGG	3 cut(s)	603, 1282, 2080
FalI	AAGNNNNNCTT	2 cut(s)	759, 791
FauI	CCCGC	3 cut(s)	83, 1688, 2340
FbaI	TGATCA	1 cut(s)	1726
Fnu4HI	GCNGC	3 cut(s)	1584, 1878, 2127
FokI	GGATG	6 cut(s)	72, 587, 1016, 1795, 1916, 2283
FriOI	GRGCYC	1 cut(s)	827
Fsp4HI	GCNGC	3 cut(s)	1584, 1878, 2127
FspBI	CTAG	7 cut(s)	591, 1266, 1353, 1524, 2108, 2163, 2477
GlaI	GCGC	3 cut(s)	103, 151, 1669
GluI	GCNGC	3 cut(s)	1584, 1878, 2127
GsaI	CCCAGC	3 cut(s)	1134, 1200, 1361
GsuI	CTGGAG	1 cut(s)	2082
HaeII	RGCGCY	1 cut(s)	1671
HaeIII	GGCC	2 cut(s)	792, 2205
HapII	CCGG	4 cut(s)	185, 208, 2316, 2511
HgaI	GACGC	1 cut(s)	1475
HhaI	GCGC	3 cut(s)	104, 152, 1670
Hin6I	GCGC	3 cut(s)	102, 150, 1668
HinP1I	GCGC	3 cut(s)	102, 150, 1668
HincII	GTYRAC	3 cut(s)	259, 1036, 1678
HindII	GTYRAC	3 cut(s)	259, 1036, 1678
HinfI	GANTC	6 cut(s)	355, 392, 1732, 2095, 2321, 2449
HpaII	CCGG	4 cut(s)	185, 208, 2316, 2511
HphI	GGTGA	6 cut(s)	13, 619, 707, 2321, 2330, 2499
Hpy188I	TCNGA	9 cut(s)	449, 481, 837, 1453, 1560, 1664, 1731, 1963, 2094
Hpy99I	CGWCG	1 cut(s)	1077
HpyAV	CCTTC	9 cut(s)	28, 34, 63, 165, 881, 1580, 1901, 1989, 2384
HpyCH4III	ACNGT	5 cut(s)	386, 403, 817, 1796, 2468
HpyCH4IV	ACGT	2 cut(s)	255, 1418
HpyF10VI	GCNNNNNNNGC	5 cut(s)	302, 554, 1127, 1592, 1893
HpyF3I	CTNAG	9 cut(s)	480, 645, 1450, 1817, 1867, 1891, 1960, 2348, 2540
HpySE526I	ACGT	2 cut(s)	255, 1418
HspAI	GCGC	3 cut(s)	102, 150, 1668
Kpn2I	TCCGGA	1 cut(s)	184
Ksp22I	TGATCA	1 cut(s)	1726
Kzo9I	GATC	7 cut(s)	221, 325, 1125, 1365, 1726, 1810, 1963
LmnI	GCTCC	5 cut(s)	210, 237, 449, 2063, 2657
Lsp1109I	GCAGC	3 cut(s)	1570, 1889, 2113
LweI	GCATC	5 cut(s)	767, 939, 1479, 1773, 2028
MaeI	CTAG	7 cut(s)	591, 1266, 1353, 1524, 2108, 2163, 2477
MaeII	ACGT	2 cut(s)	255, 1418
MaeIII	GTNAC	9 cut(s)	397, 616, 794, 802, 1414, 1855, 2165, 2175, 2318
MalI	GATC	7 cut(s)	223, 327, 1127, 1367, 1728, 1812, 1965
MboI	GATC	7 cut(s)	221, 325, 1125, 1365, 1726, 1810, 1963
MfeI	CAATTG	2 cut(s)	1048, 2481
MflI	RGATCY	2 cut(s)	325, 1810
MhlI	GDGCHC	1 cut(s)	827
MlyI	GAGTC	1 cut(s)	2315
MmeI	TCCRAC	3 cut(s)	552, 1642, 2072
Mph1103I	ATGCAT	1 cut(s)	1788
MroI	TCCGGA	1 cut(s)	184
MseI	TTAA	6 cut(s)	509, 653, 1539, 1913, 2010, 2499
MspI	CCGG	4 cut(s)	185, 208, 2316, 2511
MspR9I	CCNGG	2 cut(s)	2268, 2511
MunI	CAATTG	2 cut(s)	1048, 2481
Mva1269I	GAATGC	1 cut(s)	1123
MvaI	CCWGG	1 cut(s)	2268
MvnI	CGCG	1 cut(s)	102
MwoI	GCNNNNNNNGC	5 cut(s)	302, 554, 1127, 1592, 1893
NciI	CCSGG	1 cut(s)	2511
NcoI	CCATGG	1 cut(s)	1282
NdeII	GATC	7 cut(s)	221, 325, 1125, 1365, 1726, 1810, 1963
NheI	GCTAGC	2 cut(s)	1523, 2476
NlaIV	GGNNCC	4 cut(s)	588, 1700, 2086, 2151
NmeAIII	GCCGAG	1 cut(s)	1553
NmuCI	GTSAC	5 cut(s)	397, 794, 802, 2165, 2318
NsiI	ATGCAT	1 cut(s)	1788
NspI	RCATGY	3 cut(s)	977, 1042, 1684
NspV	TTCGAA	1 cut(s)	629
OliI	CACNNNNGTG	1 cut(s)	725
PaeI	GCATGC	1 cut(s)	977
PaeR7I	CTCGAG	1 cut(s)	2360
PagI	TCATGA	1 cut(s)	2028
PaqCI	CACCTGC	1 cut(s)	1217
PceI	AGGCCT	1 cut(s)	2205
PciI	ACATGT	2 cut(s)	1038, 1680
PcsI	WCGNNNNNNNCGW	1 cut(s)	1424
PctI	GAATGC	1 cut(s)	1123
PfeI	GAWTC	5 cut(s)	355, 392, 1732, 2095, 2449
PflFI	GACNNNGTC	1 cut(s)	800
PkrI	GCNGC	3 cut(s)	1585, 1879, 2128
PleI	GAGTC	1 cut(s)	2315
PpsI	GAGTC	1 cut(s)	2315
Ppu21I	YACGTR	1 cut(s)	1419
PscI	ACATGT	2 cut(s)	1038, 1680
PshBI	ATTAAT	1 cut(s)	653
PsiI	TTATAA	2 cut(s)	713, 1769
Psp124BI	GAGCTC	1 cut(s)	827
Psp6I	CCWGG	1 cut(s)	2266
PspFI	CCCAGC	3 cut(s)	1130, 1196, 1357
PspGI	CCWGG	1 cut(s)	2266
PspN4I	GGNNCC	4 cut(s)	588, 1700, 2086, 2151
PspPI	GGNCC	1 cut(s)	210
PsuI	RGATCY	2 cut(s)	325, 1810
PsyI	GACNNNGTC	1 cut(s)	800
RsaI	GTAC	6 cut(s)	383, 1685, 2301, 2400, 2418, 2515
RsaNI	GTAC	6 cut(s)	382, 1684, 2300, 2399, 2417, 2514
SacI	GAGCTC	1 cut(s)	827
SaqAI	TTAA	6 cut(s)	509, 653, 1539, 1913, 2010, 2499
SatI	GCNGC	3 cut(s)	1584, 1878, 2127
Sau3AI	GATC	7 cut(s)	221, 325, 1125, 1365, 1726, 1810, 1963
Sau96I	GGNCC	1 cut(s)	210
SchI	GAGTC	1 cut(s)	2315
ScrFI	CCNGG	2 cut(s)	2268, 2511
SduI	GDGCHC	1 cut(s)	827
SfaNI	GCATC	5 cut(s)	767, 939, 1479, 1773, 2028
SfcI	CTRYAG	2 cut(s)	318, 1703
Sfr274I	CTCGAG	1 cut(s)	2360
SfuI	TTCGAA	1 cut(s)	629
SinI	GGWCC	1 cut(s)	210
SlaI	CTCGAG	1 cut(s)	2360
SmlI	CTYRAG	2 cut(s)	2360, 2608
SmoI	CTYRAG	2 cut(s)	2360, 2608
SphI	GCATGC	1 cut(s)	977
SseBI	AGGCCT	1 cut(s)	2205
SsiI	CCGC	5 cut(s)	76, 138, 1381, 1695, 2333
SspI	AATATT	3 cut(s)	162, 866, 2188
SspMI	CTAG	7 cut(s)	591, 1266, 1353, 1524, 2108, 2163, 2477
SstI	GAGCTC	1 cut(s)	827
StuI	AGGCCT	1 cut(s)	2205
StyD4I	CCNGG	2 cut(s)	2266, 2509
StyI	CCWWGG	3 cut(s)	603, 1282, 2080
TaaI	ACNGT	5 cut(s)	386, 403, 817, 1796, 2468
TaiI	ACGT	2 cut(s)	258, 1421
TaqI	TCGA	7 cut(s)	220, 468, 629, 1075, 1368, 1712, 2361
TatI	WGTACW	2 cut(s)	2299, 2416
TfiI	GAWTC	5 cut(s)	355, 392, 1732, 2095, 2449
Tru1I	TTAA	6 cut(s)	509, 653, 1539, 1913, 2010, 2499
Tru9I	TTAA	6 cut(s)	509, 653, 1539, 1913, 2010, 2499
TscAI	CASTG	4 cut(s)	820, 1341, 2356, 2473
TseFI	GTSAC	5 cut(s)	397, 794, 802, 2165, 2318
TseI	GCWGC	3 cut(s)	1583, 1877, 2126
Tsp45I	GTSAC	5 cut(s)	397, 794, 802, 2165, 2318
TspGWI	ACGGA	3 cut(s)	224, 385, 1238
TspRI	CASTG	4 cut(s)	820, 1341, 2356, 2473
Tth111I	GACNNNGTC	1 cut(s)	800
VpaK11BI	GGWCC	1 cut(s)	210
VspI	ATTAAT	1 cut(s)	653
XapI	RAATTY	8 cut(s)	374, 421, 502, 631, 703, 1009, 1614, 2306
XbaI	TCTAGA	1 cut(s)	1265
XceI	RCATGY	3 cut(s)	977, 1042, 1684
XhoI	CTCGAG	1 cut(s)	2360
XspI	CTAG	7 cut(s)	591, 1266, 1353, 1524, 2108, 2163, 2477
Zsp2I	ATGCAT	1 cut(s)	1788

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.