Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8520529.1

Orthogroup ID

OG0016717

Physical Location & Seq

Genomic Coordinates Reverse (-)

2562 .. 6026

Gene Structure 3465 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8520529.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

atggacatgtactcgaggatggggagaacagaaattgcagaaactatatttaacagcatggaaggaaaagacattgtatcatggaacaccatgatcaccggttatgtcatttccggacgtcatgatgacgcacttaatctgctatatgaattgcaaagagtagaagaaaacaagaacaccaatggtactgggtatgataatgaaagaagggttccccttaagccaaatactataacactcatgactcttcttcctagttgtgctgtattatcagcactcgctaaagggaaagagatccatgcttatgctactagacatttgttggcactagatattgctgtaggtagtgcactggttgacatgtatgctaaatgtggctgcttagatttatctagagccatgtttaatcagatgccgttaaagaatgtgatcacctggaatgtgcttatcatggcttatggtatgcatggaagaggagaggaagccttagaactctttaggaatatggtggatgaaggaagatggaataaagagataaggcctaatgaagttacattcattgcaatttttgcagcttgtagtcattctgggatggtaaatgaaggtctgaacttgttccacacaatgaaacaagaccacggcattgaacctgcaccagaccattatgcttgtgttgtggatttgcttggtcgggctggtagtgtggagcgagcatatgaaatcatcaaaaccatgccttctgagtttgataaagcaggtgcctggagtagcttgcttggtgcttgtcgactccaccaaaatgtagagattggagaaattgcagctaatcatctcctgcagctggagcctgatgtggctagtcactatgttctactctctaatatctactcatcttctggactttgggaaaaggccatggatctccggagaaaaatgaaggaaatgggagtgagaaaagagcctggttgtagttggatcgagtttgaagatgaggttcataagtttttggctggggatctgtcgcacccacaaagtgagcagctccatgaatatctcgaaaccctgtcagaaaggatgaaaaaggagggttatgtgcctgatacttcttgtgtacttcacaatgttgatgaggacgagaaggaaactttactctgtgggcacagtgaaaaactggcaatggctttcggcctcctcaatacccgtccagggactaccattagagttgccaagaaccttagagtctgtaatgactgccaccttgcagcgaaatatatctcaaagatgctggacagggagatcattttaagagatcaaagcaacaatggcggatgtgaagatggcgatgctgagacgtttgctttccggaccgagatcaaccagcttctgagcttgatcatcaatacgttctacagcaacaaggagatttttcttcgcgagcttatcagcaattcatctgatgctctggacaagattagattcgagagtcttacggataagagcaagcttgatgctcagccggagcttttcatcaggattgttccggataagaccaacaatactctctccatcattgatagcgggatcggcatgattaaagcagatttggtgaacaatatgggcacaattgcaaggtctggaaccaaggagtttacggaagcattggcttctggagtttctgatgtgagcatgattggacagtttggtgttggtttctattcggcatatcttgttgcagagaaggtcattgtgactacaaagcacaatgatgatgagcaatacatctgggagtctcaggctggtggttcattcacagtgacaagggatgtcaatggcgagcagcttggcaggggcaccaagatcactctcttcctcaaggaggaccagttggaatacttggaagagaggaggatcaaagaccttgtgaagaagcattccaaatttatcagctatcccatctacttgtggactgagaagacaactgaaaaggagatctgtgatgatgaagaggacgaacccaagaaggaagagaaaggagatattgaggaagttgatgaggacaaggagaaagaagggaagaagaagaagaagaagatcaaggaagtttctcatgagtgggaactcatcaacaagcagaaaccaatctggctgcgcaagcctaaggaaatcaccaaggatgaatatgcctcattctactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

731

Amino Acids

82.92

Weight (kDa)

5.33

Isoelectric Point (pI)

43.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016717)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57430
fragaria_vesca	FvH4_3g13090
malus_domestica	MD10G1226400.v1.1
prunus_persica	Prupe.1G101200_v2.0.a1
pyrus_communis	pycom10g19030
rosa_chinensis	RchiOBHm_Chr5g0021321
rosa_laevigata	RLG00000032604
rosa_multiflora	Rmu_co8520529.1_g000003 Rmu_sc0003392.1_g000007 Rmu_sc0004847.1_g000016
rosa_rugosa	Rorug05G0066300
rosa_samantha	Rh5BG154900 Rh5CG168400
rosa_wichuraiana	Rw5G013850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	746
AatII	GACGTC	1 cut(s)	121
Acc16I	TGCGCA	1 cut(s)	2150
Acc36I	ACCTGC	2 cut(s)	658, 746
AccB1I	GGYRCC	2 cut(s)	758, 1850
AccI	GTMKAC	1 cut(s)	787
AccII	CGCG	1 cut(s)	1434
AccIII	TCCGGA	4 cut(s)	113, 924, 1362, 1540
AciI	CCGC	2 cut(s)	1326, 1578
AclWI	GGATC	6 cut(s)	289, 927, 983, 1023, 1589, 1916
AcsI	RAATTY	1 cut(s)	1937
AcyI	GRCGYC	1 cut(s)	118
AdeI	CACNNNGTG	1 cut(s)	1034
AfaI	GTAC	3 cut(s)	11, 187, 1113
AfiI	CCNNNNNNNGG	3 cut(s)	841, 1206, 1876
AflII	CTTAAG	1 cut(s)	218
AflIII	ACRYGT	2 cut(s)	6, 360
AgeI	ACCGGT	1 cut(s)	98
AgsI	TTSAA	2 cut(s)	647, 986
AjnI	CCWGG	4 cut(s)	434, 761, 961, 1204
Alw21I	GWGCWC	1 cut(s)	352
Alw26I	GTCTC	2 cut(s)	1343, 1794
Alw44I	GTGCAC	1 cut(s)	348
AlwI	GGATC	6 cut(s)	289, 927, 983, 1023, 1589, 1916
AlwNI	CAGNNNCTG	1 cut(s)	1384
Ama87I	CYCGRG	1 cut(s)	13
Aor13HI	TCCGGA	4 cut(s)	113, 924, 1362, 1540
AoxI	GGCC	3 cut(s)	539, 912, 1186
ApaLI	GTGCAC	1 cut(s)	348
ApeKI	GCWGC	8 cut(s)	378, 572, 821, 838, 1039, 1262, 1837, 2146
ApoI	RAATTY	1 cut(s)	1937
AsiGI	ACCGGT	1 cut(s)	98
Asp700I	GAANNNNTTC	1 cut(s)	614
AspLEI	GCGC	1 cut(s)	2151
AspS9I	GGNCC	2 cut(s)	1365, 1879
AsuHPI	GGTGA	4 cut(s)	88, 424, 1618, 2158
AvaI	CYCGRG	1 cut(s)	13
AvaII	GGWCC	2 cut(s)	1365, 1879
AxyI	CCTNAGG	1 cut(s)	2157
BaeGI	GKGCMC	4 cut(s)	352, 1161, 1622, 1853
BanI	GGYRCC	2 cut(s)	758, 1850
BbsI	GAAGAC	1 cut(s)	1979
Bbv12I	GWGCWC	1 cut(s)	352
BbvI	GCAGC	8 cut(s)	365, 584, 833, 850, 1051, 1274, 1849, 2133
BccI	CCATC	6 cut(s)	13, 516, 586, 1331, 1574, 1961
BceAI	ACGGC	2 cut(s)	400, 655
BciT130I	CCWGG	4 cut(s)	436, 763, 963, 1206
BclI	TGATCA	3 cut(s)	93, 429, 1392
BcoDI	GTCTC	2 cut(s)	1343, 1794
BfaI	CTAG	6 cut(s)	255, 312, 329, 393, 858, 2194
BfmI	CTRYAG	3 cut(s)	339, 836, 1408
BfrI	CTTAAG	1 cut(s)	218
BfuAI	ACCTGC	2 cut(s)	658, 746
BglII	AGATCT	1 cut(s)	1989
BisI	GCNGC	8 cut(s)	379, 573, 822, 839, 1040, 1263, 1838, 2147
BlpI	GCTNAGC	1 cut(s)	1512
BlsI	GCNGC	8 cut(s)	380, 574, 823, 840, 1041, 1264, 1839, 2148
Bme1390I	CCNGG	4 cut(s)	436, 763, 963, 1206
Bme18I	GGWCC	2 cut(s)	1365, 1879
BmeT110I	CYCGRG	1 cut(s)	13
BmgT120I	GGNCC	2 cut(s)	1365, 1879
BmiI	GGNNCC	5 cut(s)	213, 760, 846, 1639, 1852
BmrFI	CCNGG	4 cut(s)	436, 763, 963, 1206
BmrI	ACTGGG	1 cut(s)	198
BmsI	GCATC	5 cut(s)	402, 1272, 1333, 1447, 1498
BmuI	ACTGGG	1 cut(s)	198
BpiI	GAAGAC	1 cut(s)	1979
BpmI	CTGGAG	3 cut(s)	784, 863, 1689
Bpu1102I	GCTNAGC	1 cut(s)	1512
BpuEI	CTTGAG	1 cut(s)	1856
BsaHI	GRCGYC	1 cut(s)	118
BsaJI	CCNNGG	5 cut(s)	637, 915, 1205, 1641, 2169
BsaWI	WCCGGW	5 cut(s)	98, 113, 924, 1362, 1540
BsaXI	ACNNNNNCTCC	2 cut(s)	1868, 1898
Bsc4I	CCNNNNNNNGG	3 cut(s)	841, 1206, 1876
Bse118I	RCCGGY	1 cut(s)	98
Bse1I	ACTGG	4 cut(s)	193, 357, 1176, 1882
Bse21I	CCTNAGG	1 cut(s)	2157
Bse3DI	GCAATG	2 cut(s)	558, 1182
BseAI	TCCGGA	4 cut(s)	113, 924, 1362, 1540
BseBI	CCWGG	4 cut(s)	436, 763, 963, 1206
BseDI	CCNNGG	5 cut(s)	637, 915, 1205, 1641, 2169
BseGI	GGATG	7 cut(s)	24, 517, 597, 1080, 1334, 1828, 2179
BseLI	CCNNNNNNNGG	3 cut(s)	841, 1206, 1876
BseMI	GCAATG	2 cut(s)	558, 1182
BseMII	CTCAG	6 cut(s)	732, 1338, 1376, 1526, 1805, 1959
BseNI	ACTGG	4 cut(s)	193, 357, 1176, 1882
BseRI	GAGGAG	3 cut(s)	489, 1181, 1918
BseSI	GKGCMC	4 cut(s)	352, 1161, 1622, 1853
BseXI	GCAGC	8 cut(s)	365, 584, 833, 850, 1051, 1274, 1849, 2133
BseYI	CCCAGC	1 cut(s)	1010
BsgI	GTGCAG	1 cut(s)	636
Bsh1236I	CGCG	1 cut(s)	1434
BshFI	GGCC	3 cut(s)	541, 914, 1188
BshNI	GGYRCC	2 cut(s)	758, 1850
BshTI	ACCGGT	1 cut(s)	98
BsiHKAI	GWGCWC	1 cut(s)	352
BsiHKCI	CYCGRG	1 cut(s)	13
BsiSI	CCGG	6 cut(s)	99, 114, 925, 1363, 1517, 1541
BslFI	GGGAC	1 cut(s)	1222
BslI	CCNNNNNNNGG	3 cut(s)	841, 1206, 1876
BsmAI	GTCTC	2 cut(s)	1343, 1794
BsmBI	CGTCTC	1 cut(s)	1343
BsmFI	GGGAC	1 cut(s)	1222
BsmI	GAATGC	1 cut(s)	1930
BsnI	GGCC	3 cut(s)	541, 914, 1188
BsoBI	CYCGRG	1 cut(s)	13
Bsp1286I	GDGCHC	4 cut(s)	352, 1161, 1622, 1853
Bsp13I	TCCGGA	4 cut(s)	113, 924, 1362, 1540
Bsp1720I	GCTNAGC	1 cut(s)	1512
Bsp19I	CCATGG	1 cut(s)	915
Bsp68I	TCGCGA	1 cut(s)	1434
BspACI	CCGC	2 cut(s)	1326, 1578
BspANI	GGCC	3 cut(s)	541, 914, 1188
BspCNI	CTCAG	6 cut(s)	733, 1339, 1377, 1525, 1804, 1960
BspEI	TCCGGA	4 cut(s)	113, 924, 1362, 1540
BspFNI	CGCG	1 cut(s)	1434
BspHI	TCATGA	3 cut(s)	121, 240, 2107
BspLI	GGNNCC	5 cut(s)	213, 760, 846, 1639, 1852
BspMAI	CTGCAG	1 cut(s)	840
BspMI	ACCTGC	2 cut(s)	658, 746
BspPI	GGATC	6 cut(s)	289, 927, 983, 1023, 1589, 1916
BspT107I	GGYRCC	2 cut(s)	758, 1850
BspTI	CTTAAG	1 cut(s)	218
BsrDI	GCAATG	2 cut(s)	558, 1182
BsrFI	RCCGGY	1 cut(s)	98
BsrI	ACTGG	4 cut(s)	193, 357, 1176, 1882
BssAI	RCCGGY	1 cut(s)	98
BssECI	CCNNGG	5 cut(s)	637, 915, 1205, 1641, 2169
BssNI	GRCGYC	1 cut(s)	118
BssT1I	CCWWGG	3 cut(s)	915, 1641, 2169
Bst2UI	CCWGG	4 cut(s)	436, 763, 963, 1206
Bst4CI	ACNGT	3 cut(s)	1163, 1698, 1813
Bst6I	CTCTTC	6 cut(s)	252, 466, 1871, 1893, 1998, 2019
BstACI	GRCGYC	1 cut(s)	118
BstAFI	CTTAAG	1 cut(s)	218
BstAPI	GCANNNNNTGC	1 cut(s)	569
BstC8I	GCNNGC	6 cut(s)	711, 773, 1436, 1502, 1835, 2153
BstDSI	CCRYGG	2 cut(s)	637, 915
BstENI	CCTNNNNNAGG	1 cut(s)	1874
BstF5I	GGATG	7 cut(s)	24, 517, 597, 1080, 1334, 1828, 2179
BstFNI	CGCG	1 cut(s)	1434
BstHHI	GCGC	1 cut(s)	2151
BstMAI	GTCTC	2 cut(s)	1343, 1794
BstMWI	GCNNNNNNNGC	5 cut(s)	569, 844, 1323, 1584, 2152
BstNI	CCWGG	4 cut(s)	436, 763, 963, 1206
BstNSI	RCATGY	2 cut(s)	10, 364
BstSCI	CCNGG	4 cut(s)	434, 761, 961, 1204
BstSFI	CTRYAG	3 cut(s)	339, 836, 1408
BstSLI	GKGCMC	4 cut(s)	352, 1161, 1622, 1853
BstUI	CGCG	1 cut(s)	1434
BstV1I	GCAGC	8 cut(s)	365, 584, 833, 850, 1051, 1274, 1849, 2133
BstV2I	GAAGAC	1 cut(s)	1979
BstX2I	RGATCY	4 cut(s)	294, 919, 1015, 1989
BstYI	RGATCY	4 cut(s)	294, 919, 1015, 1989
Bsu36I	CCTNAGG	1 cut(s)	2157
BsuRI	GGCC	3 cut(s)	541, 914, 1188
BtgI	CCRYGG	2 cut(s)	637, 915
BtgZI	GCGATG	1 cut(s)	1356
BtsCI	GGATG	7 cut(s)	24, 517, 597, 1080, 1334, 1828, 2179
BtsIMutI	CAGTG	3 cut(s)	350, 1168, 1818
BtuMI	TCGCGA	1 cut(s)	1434
BveI	ACCTGC	2 cut(s)	658, 746
Cac8I	GCNNGC	6 cut(s)	711, 773, 1436, 1502, 1835, 2153
CaiI	CAGNNNCTG	1 cut(s)	1384
CciI	TCATGA	3 cut(s)	121, 240, 2107
CfoI	GCGC	1 cut(s)	2151
Cfr10I	RCCGGY	1 cut(s)	98
Cfr13I	GGNCC	2 cut(s)	1365, 1879
CpoI	CGGWCCG	1 cut(s)	1365
CseI	GACGC	1 cut(s)	137
Csp6I	GTAC	3 cut(s)	10, 186, 1112
CspAI	ACCGGT	1 cut(s)	98
CspI	CGGWCCG	1 cut(s)	1365
CviQI	GTAC	3 cut(s)	10, 186, 1112
DraIII	CACNNNGTG	1 cut(s)	1034
Eam1104I	CTCTTC	6 cut(s)	252, 466, 1871, 1893, 1998, 2019
EarI	CTCTTC	6 cut(s)	252, 466, 1871, 1893, 1998, 2019
EciI	GGCGGA	1 cut(s)	1341
Eco130I	CCWWGG	3 cut(s)	915, 1641, 2169
Eco147I	AGGCCT	1 cut(s)	541
Eco47I	GGWCC	2 cut(s)	1365, 1879
Eco81I	CCTNAGG	1 cut(s)	2157
Eco88I	CYCGRG	1 cut(s)	13
EcoNI	CCTNNNNNAGG	1 cut(s)	1874
EcoRII	CCWGG	4 cut(s)	434, 761, 961, 1204
EcoT14I	CCWWGG	3 cut(s)	915, 1641, 2169
EcoT22I	ATGCAT	1 cut(s)	468
ErhI	CCWWGG	3 cut(s)	915, 1641, 2169
Esp3I	CGTCTC	1 cut(s)	1343
FaqI	GGGAC	1 cut(s)	1222
FauI	CCCGC	1 cut(s)	1571
FauNDI	CATATG	1 cut(s)	715
FbaI	TGATCA	3 cut(s)	93, 429, 1392
FblI	GTMKAC	1 cut(s)	787
Fnu4HI	GCNGC	8 cut(s)	379, 573, 822, 839, 1040, 1263, 1838, 2147
FokI	GGATG	7 cut(s)	31, 524, 604, 1087, 1341, 1835, 2186
Fsp4HI	GCNGC	8 cut(s)	379, 573, 822, 839, 1040, 1263, 1838, 2147
FspBI	CTAG	6 cut(s)	255, 312, 329, 393, 858, 2194
FspI	TGCGCA	1 cut(s)	2150
GlaI	GCGC	1 cut(s)	2150
GluI	GCNGC	8 cut(s)	379, 573, 822, 839, 1040, 1263, 1838, 2147
GsaI	CCCAGC	1 cut(s)	1014
GsuI	CTGGAG	3 cut(s)	784, 863, 1689
HaeIII	GGCC	3 cut(s)	541, 914, 1188
HapII	CCGG	6 cut(s)	99, 114, 925, 1363, 1517, 1541
HgaI	GACGC	1 cut(s)	137
HhaI	GCGC	1 cut(s)	2151
Hin1I	GRCGYC	1 cut(s)	118
Hin6I	GCGC	1 cut(s)	2149
HinP1I	GCGC	1 cut(s)	2149
HincII	GTYRAC	2 cut(s)	358, 788
HindII	GTYRAC	2 cut(s)	358, 788
HindIII	AAGCTT	1 cut(s)	1502
HinfI	GANTC	6 cut(s)	244, 789, 1239, 1476, 1483, 1787
HpaII	CCGG	6 cut(s)	99, 114, 925, 1363, 1517, 1541
HphI	GGTGA	4 cut(s)	88, 424, 1618, 2158
Hpy166II	GTNNAC	7 cut(s)	350, 358, 788, 1112, 1609, 1650, 1965
Hpy188I	TCNGA	7 cut(s)	411, 609, 742, 1069, 1386, 1456, 1678
Hpy8I	GTNNAC	7 cut(s)	350, 358, 788, 1112, 1609, 1650, 1965
HpyCH4III	ACNGT	3 cut(s)	1163, 1698, 1813
HpyCH4IV	ACGT	3 cut(s)	118, 1352, 1403
HpyF10VI	GCNNNNNNNGC	5 cut(s)	569, 844, 1323, 1584, 2152
HpySE526I	ACGT	3 cut(s)	118, 1352, 1403
Hsp92I	GRCGYC	1 cut(s)	118
HspAI	GCGC	1 cut(s)	2149
Kpn2I	TCCGGA	4 cut(s)	113, 924, 1362, 1540
Ksp22I	TGATCA	3 cut(s)	93, 429, 1392
LmnI	GCTCC	4 cut(s)	706, 844, 1047, 1519
Lsp1109I	GCAGC	8 cut(s)	365, 584, 833, 850, 1051, 1274, 1849, 2133
LweI	GCATC	5 cut(s)	402, 1272, 1333, 1447, 1498
MaeI	CTAG	6 cut(s)	255, 312, 329, 393, 858, 2194
MaeII	ACGT	3 cut(s)	118, 1352, 1403
MaeIII	GTNAC	4 cut(s)	550, 860, 1747, 1813
MfeI	CAATTG	1 cut(s)	1623
MflI	RGATCY	4 cut(s)	294, 919, 1015, 1989
MhlI	GDGCHC	4 cut(s)	352, 1161, 1622, 1853
MluCI	AATT	7 cut(s)	33, 149, 564, 816, 1447, 1623, 1937
MlyI	GAGTC	5 cut(s)	238, 783, 1248, 1492, 1796
MmeI	TCCRAC	2 cut(s)	953, 1866
Mph1103I	ATGCAT	1 cut(s)	468
MroI	TCCGGA	4 cut(s)	113, 924, 1362, 1540
MroXI	GAANNNNTTC	1 cut(s)	614
MseI	TTAA	7 cut(s)	51, 135, 219, 405, 419, 1304, 1593
MslI	CAYNNNNRTG	3 cut(s)	303, 798, 1764
MspA1I	CMGCKG	1 cut(s)	841
MspCI	CTTAAG	1 cut(s)	218
MspI	CCGG	6 cut(s)	99, 114, 925, 1363, 1517, 1541
MspR9I	CCNGG	4 cut(s)	436, 763, 963, 1206
MunI	CAATTG	1 cut(s)	1623
Mva1269I	GAATGC	1 cut(s)	1930
MvaI	CCWGG	4 cut(s)	436, 763, 963, 1206
MvnI	CGCG	1 cut(s)	1434
MwoI	GCNNNNNNNGC	5 cut(s)	569, 844, 1323, 1584, 2152
NcoI	CCATGG	1 cut(s)	915
NdeI	CATATG	1 cut(s)	715
NlaIV	GGNNCC	5 cut(s)	213, 760, 846, 1639, 1852
NmuCI	GTSAC	3 cut(s)	860, 1747, 1813
NruI	TCGCGA	1 cut(s)	1434
NsbI	TGCGCA	1 cut(s)	2150
NsiI	ATGCAT	1 cut(s)	468
NspI	RCATGY	2 cut(s)	10, 364
PaeR7I	CTCGAG	1 cut(s)	13
PagI	TCATGA	3 cut(s)	121, 240, 2107
PaqCI	CACCTGC	1 cut(s)	746
PceI	AGGCCT	1 cut(s)	541
PciI	ACATGT	2 cut(s)	6, 360
PctI	GAATGC	1 cut(s)	1930
PdmI	GAANNNNTTC	1 cut(s)	614
PfeI	GAWTC	1 cut(s)	1476
PinAI	ACCGGT	1 cut(s)	98
PkrI	GCNGC	8 cut(s)	380, 574, 823, 840, 1041, 1264, 1839, 2148
PleI	GAGTC	5 cut(s)	238, 783, 1247, 1491, 1795
PpsI	GAGTC	5 cut(s)	238, 783, 1247, 1491, 1795
PscI	ACATGT	2 cut(s)	6, 360
Psp6I	CCWGG	4 cut(s)	434, 761, 961, 1204
PspFI	CCCAGC	1 cut(s)	1010
PspGI	CCWGG	4 cut(s)	434, 761, 961, 1204
PspN4I	GGNNCC	5 cut(s)	213, 760, 846, 1639, 1852
PspPI	GGNCC	2 cut(s)	1365, 1879
PspXI	VCTCGAGB	1 cut(s)	13
PstI	CTGCAG	1 cut(s)	840
PstNI	CAGNNNCTG	1 cut(s)	1384
PsuI	RGATCY	4 cut(s)	294, 919, 1015, 1989
PvuII	CAGCTG	1 cut(s)	841
RruI	TCGCGA	1 cut(s)	1434
RsaI	GTAC	3 cut(s)	11, 187, 1113
RsaNI	GTAC	3 cut(s)	10, 186, 1112
RseI	CAYNNNNRTG	3 cut(s)	303, 798, 1764
Rsr2I	CGGWCCG	1 cut(s)	1365
RsrII	CGGWCCG	1 cut(s)	1365
SalI	GTCGAC	1 cut(s)	786
SaqAI	TTAA	7 cut(s)	51, 135, 219, 405, 419, 1304, 1593
SatI	GCNGC	8 cut(s)	379, 573, 822, 839, 1040, 1263, 1838, 2147
Sau96I	GGNCC	2 cut(s)	1365, 1879
SchI	GAGTC	5 cut(s)	238, 783, 1248, 1492, 1796
ScrFI	CCNGG	4 cut(s)	436, 763, 963, 1206
SduI	GDGCHC	4 cut(s)	352, 1161, 1622, 1853
SfaNI	GCATC	5 cut(s)	402, 1272, 1333, 1447, 1498
SfcI	CTRYAG	3 cut(s)	339, 836, 1408
Sfr274I	CTCGAG	1 cut(s)	13
SinI	GGWCC	2 cut(s)	1365, 1879
SlaI	CTCGAG	1 cut(s)	13
SmiMI	CAYNNNNRTG	3 cut(s)	303, 798, 1764
SmlI	CTYRAG	3 cut(s)	13, 218, 1871
SmoI	CTYRAG	3 cut(s)	13, 218, 1871
Sse9I	AATT	7 cut(s)	33, 149, 564, 816, 1447, 1623, 1937
SseBI	AGGCCT	1 cut(s)	541
SsiI	CCGC	2 cut(s)	1326, 1578
SspMI	CTAG	6 cut(s)	255, 312, 329, 393, 858, 2194
StuI	AGGCCT	1 cut(s)	541
StyD4I	CCNGG	4 cut(s)	434, 761, 961, 1204
StyI	CCWWGG	3 cut(s)	915, 1641, 2169
TaaI	ACNGT	3 cut(s)	1163, 1698, 1813
TaiI	ACGT	3 cut(s)	121, 1355, 1406
TaqI	TCGA	5 cut(s)	14, 787, 978, 1056, 1479
TaqII	GACCGA	1 cut(s)	1382
TasI	AATT	7 cut(s)	33, 149, 564, 816, 1447, 1623, 1937
TatI	WGTACW	2 cut(s)	9, 1111
TfiI	GAWTC	1 cut(s)	1476
Tru1I	TTAA	7 cut(s)	51, 135, 219, 405, 419, 1304, 1593
Tru9I	TTAA	7 cut(s)	51, 135, 219, 405, 419, 1304, 1593
TscAI	CASTG	3 cut(s)	357, 1168, 1818
TseFI	GTSAC	3 cut(s)	860, 1747, 1813
TseI	GCWGC	8 cut(s)	378, 572, 821, 838, 1039, 1262, 1837, 2146
Tsp45I	GTSAC	3 cut(s)	860, 1747, 1813
TspGWI	ACGGA	2 cut(s)	1505, 1667
TspRI	CASTG	3 cut(s)	357, 1168, 1818
Vha464I	CTTAAG	1 cut(s)	218
VneI	GTGCAC	1 cut(s)	348
VpaK11BI	GGWCC	2 cut(s)	1365, 1879
XagI	CCTNNNNNAGG	1 cut(s)	1874
XapI	RAATTY	1 cut(s)	1937
XbaI	TCTAGA	1 cut(s)	392
XceI	RCATGY	2 cut(s)	10, 364
XhoI	CTCGAG	1 cut(s)	13
XmiI	GTMKAC	1 cut(s)	787
XmnI	GAANNNNTTC	1 cut(s)	614
XspI	CTAG	6 cut(s)	255, 312, 329, 393, 858, 2194
ZraI	GACGTC	1 cut(s)	119
Zsp2I	ATGCAT	1 cut(s)	468

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.