Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0016717

Physical Location & Seq

Genomic Coordinates Forward (+)

16360431 .. 16363035

Gene Structure 2605 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G013850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2394 bp

ATGTCCTCCTCCTTCTCTGCCCACCTCCTCTCCCAACCTTTACACACATTCTCTTCCCTCCAAATCCAACAACCCACATCTCCCAAAAGGACCACTCCACCCCCCAACTCCTCTCTTCTCAAACCCATCTCCGATTCCCGCTCATGGATCGACACCATCCGCTCCCAAACCCGGTCCAGTCACTACAAAGAAGCCATCTCAACCTACATCGAAATGACCCGTTCCGGATCGAACCCGACAAACTTGAACTTGGGGAAGCAGATACACGCCCATGTTGTCAAATTTGGATATGAGTCATCTTCTGTCACCGTGGCGAATACTCTTGTCAATGTGTATGGGAAATGTGGGGATATTGGAGATGCGTATAAGGTGTTCGATGGAATGACTGAGAGGGATCAGGTTTCTTGGAATTCCATGATTGCTGCTTTGTGTAGGTTTGAGGAATGGGAGCTGGCTTTGGAGGCGTTTCGGTCGATGTTTTCGGATAATGTGGAGCCTAGCTCGTTTACTTTGGTGAGTGCTGCACTTGCTTGTTCGAATTTGGATAGGCGTGATGGGTCGAAAACGTTTACTTTGGGGATGGTGGGATACTCGAGAGGTGTGTTTGAGTTGTTTGAGGAGTGTGACTTGGTTTCGTGGAACACCATGATAAAGTTCTTCCGGTTGATGATTCTCGAGGGAATTAGACCAGATGGGGTGACGGTTGCGAGTGTTCTTCCTGCCTGTTCTCATTTGGAGATGTTGGAGGCAGGGAAGGAAATTCATGCTTATGCATTGAGAGCCAATGAGCTAACTGGGAATTCTTATGTGGGCAGTGCTTTAGTTGACATGTATTGTAACTGCCGGCAAGTTGAAAGTGGTCGTAGAGTTTTTAATGCTGTCACGGAGCGGAGAGTTCCACTTTGGAATGCAATGATTACTGGTTATGCACAAAATGAGTATGATGAGGAGGCCTTGGACCTGTTCCTTGAAATGTATGCTGTGTCGGGGCATAGTCCAAATGCCACCACAATGTCGAGTATTGTGCCAGCATGTGTGCGGTCTGAAGCATTCTCGGGGAAAGAAAGTATCCATGGTTTTGTAATAAAGCGGAGTCTGGAGAAGAACAGGTACGTGCAAAATGCGCTTATGGACATGTACTCGAGGATGGGGAGAACAGAAATTTCAGAAACTATATTTAACAGCATGGAAGGAAAAGACATTGTATCATGGAACACCATGATCACCGGTTATAAGGGTTCCCTTAAGCCAAATACTATAACACTCATGACTCTTCTTCCTAGTTGTGCTGTATTATCAGCACTCGCTAAAGGGAAAGAGATCCATGCTTATGCTACTAGACATTTGTTGGCACTAGATATTGCTGTAGGTAGTGCACTGATTGACATGTATGCTAAATGTGGCTGCTTAGATTTATCTAGAGCCATGTTTAATCAGATGCCGTTAAAGAATGTGATCACCTGGAATGTGCTTATCATGGCTTATGGTATGCATGGAAGAGGAGAGGAAGCCTTAGAACTCTTTAGGAATATGGTGGATGAAGGAAGATGGAATAAAGAGATAAGGCCTAATGAAGTTACATTCATTGCAATTTTTGCAGCTTGTAGTCATTCAGGGATGGTAAATGAAGGTCTGAACTTGTTCCACACAATGAAACAAGACCACGGCATTGAACCTGCACCAGACCATTATGCTTGTGTTGTGGATTTGCTTGGTCGGGCTGGTAGTGTGGAGCGAGCATATGAAATCATCAAAACCATGCCTTCTGAGTTTGATAAAGCAGGTGCCTGGAGTAGCTTGCTTGGTGCTTGTCGACTCCACCAAAATGTAGAGATTGGAGAAATTGCAGCTAATCATCTCCTGCAGCTGGAGCCTGATGTGGCTAGTCACTATGTTCTACTCTCTAATATCTACTCATCTTCTGGACTTTGGGAAAAGGCCATGGATCTCCGGAGAAAAATGAAGGAAATGGGAGTGAGAAAAGAGCCTGGTTGTAGTTGGATCGAGTTTGAAGATGAGGTTCATAAGTTTTTGGCTGGGGATCTGTCGCACCCACAAAGTGAGCAGCTCCATGAATATCTCGAAACCCTGTCAGAAAGGATGAAAAAGGAGGGTTATGTGCCTGATACTTCTTGTGTACTTCACAATGTTGATGAGGACGAGAAGGAAACTTTACTCTGTGGGCACAGCGAAAAACTGGCAATGGCTTTCGGCCTCCTCAATACCCGTCCAGGGACTACCATTAGAGTTGCCAAGAACCTTAGAGTCTGTAATGACTGCCACGTTGCAGCGAAATATATCTCAAAGATGCTGGACAGGGAGATCATTTTAAGAGATGTAAGAAGGTTCCATCATTTTAGAAATGGAAATTGTTCATGTGGAGATTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

797

Amino Acids

89.34

Weight (kDa)

6.06

Isoelectric Point (pI)

52.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	132 - 170	1e-07	PPR repeat family
PPR_2	PF13041	301 - 346	3e-06	PPR repeat family
PPR_2	PF13041	483 - 515	9.4e-07	PPR repeat family
PPR	PF01535	486 - 515	2.9e-08	PPR repeat
E_motif	PF20431	607 - 669	3.1e-21	E motif
Eplus_motif	PF20430	674 - 701	7.2e-07	E+ motif
DYW_deaminase	PF14432	705 - 797	4.1e-45	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016717)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57430
fragaria_vesca	FvH4_3g13090
malus_domestica	MD10G1226400.v1.1
prunus_persica	Prupe.1G101200_v2.0.a1
pyrus_communis	pycom10g19030
rosa_chinensis	RchiOBHm_Chr5g0021321
rosa_laevigata	RLG00000032604
rosa_multiflora	Rmu_co8520529.1_g000003 Rmu_sc0003392.1_g000007 Rmu_sc0004847.1_g000016
rosa_rugosa	Rorug05G0066300
rosa_samantha	Rh5BG154900 Rh5CG168400
rosa_wichuraiana	Rw5G013850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1233
AarI	CACCTGC	1 cut(s)	1772
Acc36I	ACCTGC	2 cut(s)	1684, 1772
AccB1I	GGYRCC	1 cut(s)	1784
AccBSI	CCGCTC	3 cut(s)	141, 162, 889
AccI	GTMKAC	1 cut(s)	1813
AccIII	TCCGGA	2 cut(s)	224, 1950
AciI	CCGC	5 cut(s)	139, 160, 889, 1039, 1090
AclI	AACGTT	1 cut(s)	566
AclWI	GGATC	7 cut(s)	155, 235, 402, 1315, 1953, 2009, 2049
AcsI	RAATTY	6 cut(s)	281, 409, 538, 759, 799, 1161
AcuI	CTGAAG	1 cut(s)	1065
AdeI	CACNNNGTG	1 cut(s)	2060
AfaI	GTAC	3 cut(s)	1112, 1139, 2139
AfiI	CCNNNNNNNGG	4 cut(s)	144, 171, 1867, 2232
AflII	CTTAAG	1 cut(s)	1244
AflIII	ACRYGT	3 cut(s)	828, 1134, 1386
AgeI	ACCGGT	1 cut(s)	1226
AgsI	TTSAA	5 cut(s)	247, 854, 971, 1673, 2012
AjnI	CCWGG	4 cut(s)	1460, 1787, 1987, 2230
AluBI	AGCT	8 cut(s)	451, 501, 790, 1601, 1797, 1850, 1867, 2068
AluI	AGCT	8 cut(s)	451, 501, 790, 1601, 1797, 1850, 1867, 2068
Alw21I	GWGCWC	1 cut(s)	1378
Alw44I	GTGCAC	1 cut(s)	1374
AlwI	GGATC	7 cut(s)	155, 235, 402, 1315, 1953, 2009, 2049
Ama87I	CYCGRG	4 cut(s)	592, 674, 1054, 1141
Aor13HI	TCCGGA	2 cut(s)	224, 1950
AoxI	GGCC	4 cut(s)	951, 1565, 1938, 2212
ApaLI	GTGCAC	1 cut(s)	1374
ApeKI	GCWGC	8 cut(s)	422, 521, 1404, 1598, 1847, 1864, 2065, 2288
ApoI	RAATTY	6 cut(s)	281, 409, 538, 759, 799, 1161
AsiGI	ACCGGT	1 cut(s)	1226
Asp700I	GAANNNNTTC	2 cut(s)	1640, 2371
AspLEI	GCGC	1 cut(s)	1126
AspS9I	GGNCC	3 cut(s)	90, 174, 958
AsuC2I	CCSGG	1 cut(s)	172
AsuHPI	GGTGA	5 cut(s)	298, 526, 709, 1216, 1450
AsuII	TTCGAA	1 cut(s)	536
AvaI	CYCGRG	4 cut(s)	592, 674, 1054, 1141
AvaII	GGWCC	3 cut(s)	90, 174, 958
BaeGI	GKGCMC	2 cut(s)	1378, 2187
BanI	GGYRCC	1 cut(s)	1784
BarI	GAAGNNNNNNTAC	2 cut(s)	1094, 1126
Bbv12I	GWGCWC	1 cut(s)	1378
BbvI	GCAGC	8 cut(s)	409, 508, 1391, 1610, 1859, 1876, 2077, 2300
BceAI	ACGGC	2 cut(s)	1426, 1681
BcgI	CGANNNNNNTGC	2 cut(s)	1006, 1040
BciT130I	CCWGG	4 cut(s)	1462, 1789, 1989, 2232
BciVI	GTATCC	2 cut(s)	581, 1079
BclI	TGATCA	2 cut(s)	1221, 1455
BcnI	CCSGG	1 cut(s)	172
BfaI	CTAG	6 cut(s)	498, 1281, 1338, 1355, 1419, 1884
BfmI	CTRYAG	2 cut(s)	1365, 1862
BfrI	CTTAAG	1 cut(s)	1244
BfuAI	ACCTGC	2 cut(s)	1684, 1772
BfuI	GTATCC	2 cut(s)	581, 1079
BisI	GCNGC	8 cut(s)	423, 522, 1405, 1599, 1848, 1865, 2066, 2289
BlsI	GCNGC	8 cut(s)	424, 523, 1406, 1600, 1849, 1866, 2067, 2290
Bme1390I	CCNGG	5 cut(s)	172, 1462, 1789, 1989, 2232
Bme18I	GGWCC	3 cut(s)	90, 174, 958
BmeT110I	CYCGRG	4 cut(s)	592, 674, 1054, 1141
BmgT120I	GGNCC	3 cut(s)	90, 174, 958
BmiI	GGNNCC	5 cut(s)	495, 1240, 1786, 1872, 2348
BmrFI	CCNGG	5 cut(s)	172, 1462, 1789, 1989, 2232
BmrI	ACTGGG	1 cut(s)	804
BmsI	GCATC	3 cut(s)	349, 1428, 2298
BmuI	ACTGGG	1 cut(s)	804
BplI	GAGNNNNNCTC	2 cut(s)	485, 517
BpmI	CTGGAG	3 cut(s)	1118, 1810, 1889
Bpu14I	TTCGAA	1 cut(s)	536
BpuMI	CCSGG	1 cut(s)	172
BsaAI	YACGTR	1 cut(s)	1114
BsaJI	CCNNGG	6 cut(s)	309, 954, 1072, 1663, 1941, 2231
BsaWI	WCCGGW	4 cut(s)	224, 660, 1226, 1950
BsaXI	ACNNNNNCTCC	2 cut(s)	14, 44
Bsc4I	CCNNNNNNNGG	4 cut(s)	144, 171, 1867, 2232
Bse118I	RCCGGY	2 cut(s)	843, 1226
Bse1I	ACTGG	4 cut(s)	177, 799, 925, 2202
Bse3DI	GCAATG	3 cut(s)	918, 1584, 2208
BseAI	TCCGGA	2 cut(s)	224, 1950
BseBI	CCWGG	4 cut(s)	1462, 1789, 1989, 2232
BseDI	CCNNGG	6 cut(s)	309, 954, 1072, 1663, 1941, 2231
BseGI	GGATG	6 cut(s)	156, 585, 1152, 1543, 1623, 2106
BseLI	CCNNNNNNNGG	4 cut(s)	144, 171, 1867, 2232
BseMI	GCAATG	3 cut(s)	918, 1584, 2208
BseMII	CTCAG	2 cut(s)	378, 1758
BseNI	ACTGG	4 cut(s)	177, 799, 925, 2202
BseRI	GAGGAG	6 cut(s)	17, 100, 632, 962, 1515, 2207
BseSI	GKGCMC	2 cut(s)	1378, 2187
BseXI	GCAGC	8 cut(s)	409, 508, 1391, 1610, 1859, 1876, 2077, 2300
BseYI	CCCAGC	1 cut(s)	2036
BsgI	GTGCAG	2 cut(s)	507, 1662
Bsh1285I	CGRYCG	1 cut(s)	473
BshFI	GGCC	4 cut(s)	953, 1567, 1940, 2214
BshNI	GGYRCC	1 cut(s)	1784
BshTI	ACCGGT	1 cut(s)	1226
BsiEI	CGRYCG	1 cut(s)	473
BsiHKAI	GWGCWC	1 cut(s)	1378
BsiHKCI	CYCGRG	4 cut(s)	592, 674, 1054, 1141
BsiSI	CCGG	6 cut(s)	172, 225, 661, 844, 1227, 1951
BslFI	GGGAC	1 cut(s)	2248
BslI	CCNNNNNNNGG	4 cut(s)	144, 171, 1867, 2232
BsmFI	GGGAC	1 cut(s)	2248
BsmI	GAATGC	2 cut(s)	913, 1049
BsnI	GGCC	4 cut(s)	953, 1567, 1940, 2214
BsoBI	CYCGRG	4 cut(s)	592, 674, 1054, 1141
Bsp119I	TTCGAA	1 cut(s)	536
Bsp1286I	GDGCHC	2 cut(s)	1378, 2187
Bsp13I	TCCGGA	2 cut(s)	224, 1950
Bsp19I	CCATGG	2 cut(s)	1072, 1941
BspACI	CCGC	5 cut(s)	139, 160, 889, 1039, 1090
BspANI	GGCC	4 cut(s)	953, 1567, 1940, 2214
BspCNI	CTCAG	2 cut(s)	379, 1759
BspEI	TCCGGA	2 cut(s)	224, 1950
BspHI	TCATGA	1 cut(s)	1266
BspLI	GGNNCC	5 cut(s)	495, 1240, 1786, 1872, 2348
BspMAI	CTGCAG	1 cut(s)	1866
BspMI	ACCTGC	2 cut(s)	1684, 1772
BspPI	GGATC	7 cut(s)	155, 235, 402, 1315, 1953, 2009, 2049
BspT104I	TTCGAA	1 cut(s)	536
BspT107I	GGYRCC	1 cut(s)	1784
BspTI	CTTAAG	1 cut(s)	1244
BsrBI	CCGCTC	3 cut(s)	141, 162, 889
BsrDI	GCAATG	3 cut(s)	918, 1584, 2208
BsrFI	RCCGGY	2 cut(s)	843, 1226
BsrI	ACTGG	4 cut(s)	177, 799, 925, 2202
BssAI	RCCGGY	2 cut(s)	843, 1226
BssECI	CCNNGG	6 cut(s)	309, 954, 1072, 1663, 1941, 2231
BssT1I	CCWWGG	3 cut(s)	954, 1072, 1941
Bst2UI	CCWGG	4 cut(s)	1462, 1789, 1989, 2232
Bst4CI	ACNGT	2 cut(s)	310, 703
Bst6I	CTCTTC	4 cut(s)	58, 120, 1278, 1492
BstAFI	CTTAAG	1 cut(s)	1244
BstAPI	GCANNNNNTGC	1 cut(s)	1595
BstBAI	YACGTR	1 cut(s)	1114
BstBI	TTCGAA	1 cut(s)	536
BstC8I	GCNNGC	5 cut(s)	453, 845, 1029, 1737, 1799
BstDEI	CTNAG	5 cut(s)	387, 1408, 1513, 1767, 2261
BstDSI	CCRYGG	4 cut(s)	309, 1072, 1663, 1941
BstF5I	GGATG	6 cut(s)	156, 585, 1152, 1543, 1623, 2106
BstHHI	GCGC	1 cut(s)	1126
BstMCI	CGRYCG	1 cut(s)	473
BstMWI	GCNNNNNNNGC	6 cut(s)	461, 527, 779, 1123, 1595, 1870
BstNI	CCWGG	4 cut(s)	1462, 1789, 1989, 2232
BstNSI	RCATGY	4 cut(s)	832, 1035, 1138, 1390
BstSCI	CCNGG	5 cut(s)	170, 1460, 1787, 1987, 2230
BstSFI	CTRYAG	2 cut(s)	1365, 1862
BstSLI	GKGCMC	2 cut(s)	1378, 2187
BstV1I	GCAGC	8 cut(s)	409, 508, 1391, 1610, 1859, 1876, 2077, 2300
BstX2I	RGATCY	3 cut(s)	1320, 1945, 2041
BstYI	RGATCY	3 cut(s)	1320, 1945, 2041
BsuI	GTATCC	2 cut(s)	581, 1079
BsuRI	GGCC	4 cut(s)	953, 1567, 1940, 2214
BtgI	CCRYGG	4 cut(s)	309, 1072, 1663, 1941
BtsCI	GGATG	6 cut(s)	156, 585, 1152, 1543, 1623, 2106
BtsI	GCAGTG	1 cut(s)	820
BtsIMutI	CAGTG	2 cut(s)	820, 1376
BveI	ACCTGC	2 cut(s)	1684, 1772
Cac8I	GCNNGC	5 cut(s)	453, 845, 1029, 1737, 1799
CciI	TCATGA	1 cut(s)	1266
CfoI	GCGC	1 cut(s)	1126
Cfr10I	RCCGGY	2 cut(s)	843, 1226
Cfr13I	GGNCC	3 cut(s)	90, 174, 958
Csp6I	GTAC	3 cut(s)	1111, 1138, 2138
CspAI	ACCGGT	1 cut(s)	1226
CviQI	GTAC	3 cut(s)	1111, 1138, 2138
DdeI	CTNAG	5 cut(s)	387, 1408, 1513, 1767, 2261
DraIII	CACNNNGTG	1 cut(s)	2060
Eam1104I	CTCTTC	4 cut(s)	58, 120, 1278, 1492
EarI	CTCTTC	4 cut(s)	58, 120, 1278, 1492
Eco130I	CCWWGG	3 cut(s)	954, 1072, 1941
Eco147I	AGGCCT	2 cut(s)	953, 1567
Eco47I	GGWCC	3 cut(s)	90, 174, 958
Eco57I	CTGAAG	1 cut(s)	1065
Eco88I	CYCGRG	4 cut(s)	592, 674, 1054, 1141
EcoRI	GAATTC	2 cut(s)	409, 799
EcoRII	CCWGG	4 cut(s)	1460, 1787, 1987, 2230
EcoT14I	CCWWGG	3 cut(s)	954, 1072, 1941
EcoT22I	ATGCAT	2 cut(s)	775, 1494
ErhI	CCWWGG	3 cut(s)	954, 1072, 1941
FaqI	GGGAC	1 cut(s)	2248
FauI	CCCGC	1 cut(s)	146
FauNDI	CATATG	1 cut(s)	1741
FbaI	TGATCA	2 cut(s)	1221, 1455
FblI	GTMKAC	1 cut(s)	1813
Fnu4HI	GCNGC	8 cut(s)	423, 522, 1405, 1599, 1848, 1865, 2066, 2289
FokI	GGATG	6 cut(s)	143, 592, 1159, 1550, 1630, 2113
Fsp4HI	GCNGC	8 cut(s)	423, 522, 1405, 1599, 1848, 1865, 2066, 2289
FspBI	CTAG	6 cut(s)	498, 1281, 1338, 1355, 1419, 1884
GlaI	GCGC	1 cut(s)	1125
GluI	GCNGC	8 cut(s)	423, 522, 1405, 1599, 1848, 1865, 2066, 2289
GsaI	CCCAGC	1 cut(s)	2040
GsuI	CTGGAG	3 cut(s)	1118, 1810, 1889
HaeIII	GGCC	4 cut(s)	953, 1567, 1940, 2214
HapII	CCGG	6 cut(s)	172, 225, 661, 844, 1227, 1951
HhaI	GCGC	1 cut(s)	1126
Hin6I	GCGC	1 cut(s)	1124
HinP1I	GCGC	1 cut(s)	1124
HincII	GTYRAC	2 cut(s)	826, 1814
HindII	GTYRAC	2 cut(s)	826, 1814
HinfI	GANTC	7 cut(s)	134, 293, 670, 1093, 1270, 1815, 2265
HpaII	CCGG	6 cut(s)	172, 225, 661, 844, 1227, 1951
HphI	GGTGA	5 cut(s)	298, 526, 709, 1216, 1450
Hpy166II	GTNNAC	6 cut(s)	507, 570, 826, 1376, 1814, 2138
Hpy188I	TCNGA	8 cut(s)	133, 484, 1045, 1168, 1437, 1635, 1768, 2095
Hpy188III	TCNNGA	9 cut(s)	225, 594, 674, 1097, 1267, 1419, 1923, 1951, 2081
Hpy8I	GTNNAC	6 cut(s)	507, 570, 826, 1376, 1814, 2138
HpyAV	CCTTC	9 cut(s)	22, 748, 1184, 1535, 1622, 1773, 1957, 2158, 2337
HpyCH4III	ACNGT	2 cut(s)	310, 703
HpyCH4IV	ACGT	3 cut(s)	566, 1113, 2283
HpyF10VI	GCNNNNNNNGC	6 cut(s)	461, 527, 779, 1123, 1595, 1870
HpyF3I	CTNAG	5 cut(s)	387, 1408, 1513, 1767, 2261
HpySE526I	ACGT	3 cut(s)	566, 1113, 2283
HspAI	GCGC	1 cut(s)	1124
Kpn2I	TCCGGA	2 cut(s)	224, 1950
KroI	GCCGGC	1 cut(s)	843
KroNI	GCCGGC	1 cut(s)	845
Ksp22I	TGATCA	2 cut(s)	1221, 1455
LmnI	GCTCC	7 cut(s)	167, 448, 493, 886, 1732, 1870, 2073
Lsp1109I	GCAGC	8 cut(s)	409, 508, 1391, 1610, 1859, 1876, 2077, 2300
LweI	GCATC	3 cut(s)	349, 1428, 2298
MaeI	CTAG	6 cut(s)	498, 1281, 1338, 1355, 1419, 1884
MaeII	ACGT	3 cut(s)	566, 1113, 2283
MaeIII	GTNAC	8 cut(s)	179, 304, 623, 697, 836, 880, 1576, 1886
MbiI	CCGCTC	3 cut(s)	141, 162, 889
MflI	RGATCY	3 cut(s)	1320, 1945, 2041
MhlI	GDGCHC	2 cut(s)	1378, 2187
MlyI	GAGTC	5 cut(s)	302, 1102, 1264, 1809, 2274
MmeI	TCCRAC	3 cut(s)	91, 723, 1979
Mph1103I	ATGCAT	2 cut(s)	775, 1494
MroI	TCCGGA	2 cut(s)	224, 1950
MroNI	GCCGGC	1 cut(s)	843
MroXI	GAANNNNTTC	2 cut(s)	1640, 2371
MseI	TTAA	6 cut(s)	873, 1179, 1245, 1431, 1445, 2330
MslI	CAYNNNNRTG	6 cut(s)	212, 270, 768, 1010, 1329, 1824
MspA1I	CMGCKG	1 cut(s)	1867
MspCI	CTTAAG	1 cut(s)	1244
MspI	CCGG	6 cut(s)	172, 225, 661, 844, 1227, 1951
MspR9I	CCNGG	5 cut(s)	172, 1462, 1789, 1989, 2232
Mva1269I	GAATGC	2 cut(s)	913, 1049
MvaI	CCWGG	4 cut(s)	1462, 1789, 1989, 2232
MwoI	GCNNNNNNNGC	6 cut(s)	461, 527, 779, 1123, 1595, 1870
NaeI	GCCGGC	1 cut(s)	845
NciI	CCSGG	1 cut(s)	172
NcoI	CCATGG	2 cut(s)	1072, 1941
NdeI	CATATG	1 cut(s)	1741
NgoMIV	GCCGGC	1 cut(s)	843
NlaIV	GGNNCC	5 cut(s)	495, 1240, 1786, 1872, 2348
NmuCI	GTSAC	6 cut(s)	179, 304, 623, 697, 880, 1886
NsiI	ATGCAT	2 cut(s)	775, 1494
NspI	RCATGY	4 cut(s)	832, 1035, 1138, 1390
NspV	TTCGAA	1 cut(s)	536
PaeR7I	CTCGAG	3 cut(s)	592, 674, 1141
PagI	TCATGA	1 cut(s)	1266
PaqCI	CACCTGC	1 cut(s)	1772
PceI	AGGCCT	2 cut(s)	953, 1567
PciI	ACATGT	3 cut(s)	828, 1134, 1386
PctI	GAATGC	2 cut(s)	913, 1049
PdiI	GCCGGC	1 cut(s)	845
PdmI	GAANNNNTTC	2 cut(s)	1640, 2371
PfeI	GAWTC	2 cut(s)	134, 670
PinAI	ACCGGT	1 cut(s)	1226
PkrI	GCNGC	8 cut(s)	424, 523, 1406, 1600, 1849, 1866, 2067, 2290
PleI	GAGTC	5 cut(s)	301, 1101, 1264, 1809, 2273
PpsI	GAGTC	5 cut(s)	301, 1101, 1264, 1809, 2273
Ppu21I	YACGTR	1 cut(s)	1114
PscI	ACATGT	3 cut(s)	828, 1134, 1386
PsiI	TTATAA	1 cut(s)	1233
Psp1406I	AACGTT	1 cut(s)	566
Psp6I	CCWGG	4 cut(s)	1460, 1787, 1987, 2230
PspFI	CCCAGC	1 cut(s)	2036
PspGI	CCWGG	4 cut(s)	1460, 1787, 1987, 2230
PspN4I	GGNNCC	5 cut(s)	495, 1240, 1786, 1872, 2348
PspPI	GGNCC	3 cut(s)	90, 174, 958
PspXI	VCTCGAGB	1 cut(s)	1141
PsrI	GAACNNNNNNTAC	2 cut(s)	356, 388
PstI	CTGCAG	1 cut(s)	1866
PsuI	RGATCY	3 cut(s)	1320, 1945, 2041
PvuII	CAGCTG	1 cut(s)	1867
RsaI	GTAC	3 cut(s)	1112, 1139, 2139
RsaNI	GTAC	3 cut(s)	1111, 1138, 2138
RseI	CAYNNNNRTG	6 cut(s)	212, 270, 768, 1010, 1329, 1824
SalI	GTCGAC	1 cut(s)	1812
SaqAI	TTAA	6 cut(s)	873, 1179, 1245, 1431, 1445, 2330
SatI	GCNGC	8 cut(s)	423, 522, 1405, 1599, 1848, 1865, 2066, 2289
Sau96I	GGNCC	3 cut(s)	90, 174, 958
SchI	GAGTC	5 cut(s)	302, 1102, 1264, 1809, 2274
ScrFI	CCNGG	5 cut(s)	172, 1462, 1789, 1989, 2232
SduI	GDGCHC	2 cut(s)	1378, 2187
SfaNI	GCATC	3 cut(s)	349, 1428, 2298
SfcI	CTRYAG	2 cut(s)	1365, 1862
Sfr274I	CTCGAG	3 cut(s)	592, 674, 1141
SfuI	TTCGAA	1 cut(s)	536
SinI	GGWCC	3 cut(s)	90, 174, 958
SlaI	CTCGAG	3 cut(s)	592, 674, 1141
SmiMI	CAYNNNNRTG	6 cut(s)	212, 270, 768, 1010, 1329, 1824
SmlI	CTYRAG	4 cut(s)	592, 674, 1141, 1244
SmoI	CTYRAG	4 cut(s)	592, 674, 1141, 1244
SseBI	AGGCCT	2 cut(s)	953, 1567
SsiI	CCGC	5 cut(s)	139, 160, 889, 1039, 1090
SspMI	CTAG	6 cut(s)	498, 1281, 1338, 1355, 1419, 1884
StuI	AGGCCT	2 cut(s)	953, 1567
StyD4I	CCNGG	5 cut(s)	170, 1460, 1787, 1987, 2230
StyI	CCWWGG	3 cut(s)	954, 1072, 1941
TaaI	ACNGT	2 cut(s)	310, 703
TaiI	ACGT	3 cut(s)	569, 1116, 2286
TaqII	GACCGA	1 cut(s)	459
TatI	WGTACW	2 cut(s)	1137, 2137
TfiI	GAWTC	2 cut(s)	134, 670
Tru1I	TTAA	6 cut(s)	873, 1179, 1245, 1431, 1445, 2330
Tru9I	TTAA	6 cut(s)	873, 1179, 1245, 1431, 1445, 2330
TscAI	CASTG	2 cut(s)	820, 1383
TseFI	GTSAC	6 cut(s)	179, 304, 623, 697, 880, 1886
TseI	GCWGC	8 cut(s)	422, 521, 1404, 1598, 1847, 1864, 2065, 2288
Tsp45I	GTSAC	6 cut(s)	179, 304, 623, 697, 880, 1886
TspGWI	ACGGA	1 cut(s)	899
TspRI	CASTG	2 cut(s)	820, 1383
Vha464I	CTTAAG	1 cut(s)	1244
VneI	GTGCAC	1 cut(s)	1374
VpaK11BI	GGWCC	3 cut(s)	90, 174, 958
XapI	RAATTY	6 cut(s)	281, 409, 538, 759, 799, 1161
XbaI	TCTAGA	1 cut(s)	1418
XceI	RCATGY	4 cut(s)	832, 1035, 1138, 1390
XhoI	CTCGAG	3 cut(s)	592, 674, 1141
XmiI	GTMKAC	1 cut(s)	1813
XmnI	GAANNNNTTC	2 cut(s)	1640, 2371
XspI	CTAG	6 cut(s)	498, 1281, 1338, 1355, 1419, 1884
Zsp2I	ATGCAT	2 cut(s)	775, 1494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.