Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004381

Physical Location & Seq

Genomic Coordinates Forward (+)

21484156 .. 21487102

Gene Structure 2947 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G58030.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGGGTGAGGAGTTAGCTGACACAATGAACCTGGATTTGAATCTTGGGCCTGGTCCTGAGTCTGATCTCCAACCTGCACCAAACGAGACTGTGAATTTGGCTGATTGGACTAATGACCCGCCTGAGAGATCTTCTGAAGCTGTGACAAGGATCAGGACTCGGCATAGGACACGGTTCAGACAGCTTAATCTCCCGATCCCGGTTCTATCTGAAACCCATACCATGGCTATAGAGCTCAACCAGTTGATGGGAAATTCTGTAAATAGAGCTGCTATGCAGACTGGTGAGGGTAGTGAAAGAGGCAATGAGGATTTGAAAATGTGTGAGAATGGCGATGGAGCCCTTGGGGACGGTGTATTGGATAAGAAAGCGGATGTCGAGAAAAGCAGTGGCAGCGACGGTAACTTTTTCGATTGTAATATATGTTTGGATTTGTCGAAGGAGCCGGTTCTCACCTGTTGTGGTCATCTTTACTGTTGGCCTTGTCTGTACCAATGGTTACAAATTTCGGATGCAAAGGAATGTCCTGTTTGTAAAGGAGAGGTGACCTCCAAAACCGTGACACCGATCTATGGACGTGGAAACCACAAGAGAGAAATTGAAGAGAGTTTAGATACTAAGGTCCCCATGAGACCACACGCGAGACGCATTGAGAGCTTGAGGAATACAATTCAAAGGTCGCCTTTTACAATACCAATGGAAGAAATGATTAGACGTATACAGAATAGGTTTGACAGGGATTCAACCCCAGTCCCTGATTTTAGTAACCGAGAGGCATCAGAAAGAGTCAACGATCGAGCCAATTCGATCCTTAACCGGTTGATGACATCTAGGGGAGTTAGATCAGAGCAGAACCAGGCTAGTGCTGCAGCAGCAGCCATTGTCGCAGCATCAGAGGATATTGATCTAAATCCAAACATTGCTCCTGATCTTGAAGGAGAAAGCAACACGAGATTCCATCCTCTCTTGATCAGGAGACAGTTACAGTCGCACCGAGTTGCAAGGATCTCGACTTTCACTTCTGCGTTGAGTTCAGCTGAGAGGCTTGTGGATGCGTATTTTAGGACTCATCCGTTGGGGAGGAACCACCAAGAGCAAAACCATCATGCTCCTGTTGTGGTTGATGATAGAGACTCATTCTCAAGCATTGCAGCTGTTATAAACTCTGAGAGTCAAGTGGATACTGCAGTTGAGATCGATTCTATGGCTCTTTCGACATCGTCCTCGAGGAGAAGGAATGAGAATGGTTCGAGGGTTTCTGATGTAGACAGTGCAGATTCTCGTCCGCCTAGGAGAAGGAGATTTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006508 GO:0006515 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0030163 GO:0031984 GO:0032446 GO:0032991 GO:0033554 GO:0034976 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0036513 GO:0042175 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051603 GO:0051716 GO:0051788 GO:0070647 GO:0070887 GO:0071218 GO:0071310 GO:0071704 GO:0071712 GO:0098796 GO:0098827 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

436

Amino Acids

48.7

Weight (kDa)

5.67

Isoelectric Point (pI)

56.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	138 - 179	1.6e-07	Ring finger domain
zf-RING_5	PF14634	138 - 179	1.1e-06	zinc-RING finger domain
zf-C3HC4	PF00097	139 - 178	2.2e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2	PF13923	139 - 178	1.5e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	139 - 176	1.8e-06	RING-type zinc-finger
zf-C3HC4_3	PF13920	139 - 184	3.7e-07	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004381)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G58030 AT3G58030 AT3G58030 AT3G58030
fragaria_vesca	FvH4_6g22060
malus_domestica	MD02G1306100.v1.1 MD12G1055900.v1.1 MD14G1055900.v1.1 MD14G1056100.v1.1
prunus_persica	Prupe.7G079200_v2.0.a1
pyrus_communis	pycom12g04880
rosa_chinensis	RchiOBHm_Chr3g0479381 RchiOBHm_Chr3g0479391
rosa_laevigata	RLG00000023579
rosa_multiflora	Rmu_co8192992.1_g000001 Rmu_sc0000107.1_g000001 Rmu_sc0006208.1_g000003 Rmu_sc0006208.1_g000006
rosa_roxburghii	Rroxscaffold_6G00402310 Rroxscaffold_6G00402330 Rroxscaffold_6G00402350
rosa_rugosa	Rorug03G0174800 Rorug03G0174900
rosa_samantha	Rh3AG226000 Rh3AG226100 Rh3BG258700 Rh3BG258800 Rh3CG254800 Rh3CG255000 Rh3DG250300 Rh3DG250500
rosa_wichuraiana	Rw3G020180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1160
AbsI	CCTCGAGG	1 cut(s)	1225
Acc36I	ACCTGC	1 cut(s)	82
AccB7I	CCANNNNNTGG	2 cut(s)	223, 247
AccI	GTMKAC	2 cut(s)	718, 1266
AccII	CGCG	1 cut(s)	641
AciI	CCGC	3 cut(s)	119, 371, 1286
AclWI	GGATC	4 cut(s)	158, 190, 802, 1013
AcsI	RAATTY	3 cut(s)	94, 253, 504
AcuI	CTGAAG	1 cut(s)	156
AfaI	GTAC	1 cut(s)	491
AfiI	CCNNNNNNNGG	4 cut(s)	199, 223, 247, 572
AgeI	ACCGGT	1 cut(s)	816
AgsI	TTSAA	6 cut(s)	40, 316, 602, 674, 744, 935
AjiI	CACGTC	1 cut(s)	578
AjnI	CCWGG	3 cut(s)	30, 49, 855
AluBI	AGCT	8 cut(s)	17, 140, 184, 235, 269, 657, 1037, 1154
AluI	AGCT	8 cut(s)	17, 140, 184, 235, 269, 657, 1037, 1154
Alw21I	GWGCWC	1 cut(s)	237
Alw26I	GTCTC	5 cut(s)	80, 625, 637, 970, 1125
AlwI	GGATC	4 cut(s)	158, 190, 802, 1013
AlwNI	CAGNNNCTG	1 cut(s)	755
Ama87I	CYCGRG	1 cut(s)	1225
AoxI	GGCC	2 cut(s)	47, 479
ApeKI	GCWGC	8 cut(s)	269, 393, 866, 869, 872, 875, 887, 1151
ApoI	RAATTY	3 cut(s)	94, 253, 504
ArsI	GACNNNNNNTTYG	2 cut(s)	79, 111
AsiGI	ACCGGT	1 cut(s)	816
AspA2I	CCTAGG	1 cut(s)	1289
AspS9I	GGNCC	3 cut(s)	47, 53, 622
AsuC2I	CCSGG	1 cut(s)	200
AsuHPI	GGTGA	4 cut(s)	17, 296, 445, 556
AvaI	CYCGRG	1 cut(s)	1225
AvaII	GGWCC	2 cut(s)	53, 622
AvrII	CCTAGG	1 cut(s)	1289
BaeI	ACNNNNGTAYC	4 cut(s)	606, 639, 1173, 1206
BanII	GRGCYC	2 cut(s)	237, 343
BarI	GAAGNNNNNNTAC	1 cut(s)	1288
BauI	CACGAG	1 cut(s)	949
Bbv12I	GWGCWC	1 cut(s)	237
BbvI	GCAGC	8 cut(s)	256, 405, 853, 881, 884, 887, 899, 1163
BccI	CCATC	4 cut(s)	241, 329, 966, 1110
BcgI	CGANNNNNNTGC	2 cut(s)	990, 1024
BciT130I	CCWGG	3 cut(s)	32, 51, 857
BciVI	GTATCC	1 cut(s)	1174
BclI	TGATCA	1 cut(s)	969
BcnI	CCSGG	1 cut(s)	200
BcoDI	GTCTC	5 cut(s)	80, 625, 637, 970, 1125
BfaI	CTAG	3 cut(s)	831, 861, 1290
BfmI	CTRYAG	3 cut(s)	228, 867, 1185
BfuAI	ACCTGC	1 cut(s)	82
BfuI	GTATCC	1 cut(s)	1174
BglII	AGATCT	1 cut(s)	128
BisI	GCNGC	8 cut(s)	270, 394, 867, 870, 873, 876, 888, 1152
BlnI	CCTAGG	1 cut(s)	1289
BlsI	GCNGC	8 cut(s)	271, 395, 868, 871, 874, 877, 889, 1153
Bme1390I	CCNGG	4 cut(s)	32, 51, 200, 857
Bme18I	GGWCC	2 cut(s)	53, 622
BmeT110I	CYCGRG	1 cut(s)	1225
BmgBI	CACGTC	1 cut(s)	578
BmgT120I	GGNCC	3 cut(s)	47, 53, 622
BmiI	GGNNCC	4 cut(s)	340, 444, 624, 1085
BmrFI	CCNGG	4 cut(s)	32, 51, 200, 857
BmrI	ACTGGG	1 cut(s)	743
BmsI	GCATC	4 cut(s)	502, 785, 899, 1042
BmuI	ACTGGG	1 cut(s)	743
BplI	GAGNNNNNCTC	2 cut(s)	533, 565
BpuEI	CTTGAG	2 cut(s)	679, 1126
BpuMI	CCSGG	1 cut(s)	200
Bsa29I	ATCGAT	1 cut(s)	1197
BsaBI	GATNNNNATC	3 cut(s)	39, 903, 909
BsaI	GGTCTC	1 cut(s)	625
BsaJI	CCNNGG	3 cut(s)	222, 343, 1289
BsaWI	WCCGGW	1 cut(s)	816
Bsc4I	CCNNNNNNNGG	4 cut(s)	199, 223, 247, 572
Bse118I	RCCGGY	2 cut(s)	445, 816
Bse1I	ACTGG	3 cut(s)	241, 286, 749
Bse3DI	GCAATG	3 cut(s)	310, 918, 1146
Bse8I	GATNNNNATC	3 cut(s)	39, 903, 909
BseBI	CCWGG	3 cut(s)	32, 51, 857
BseCI	ATCGAT	1 cut(s)	1197
BseDI	CCNNGG	3 cut(s)	222, 343, 1289
BseGI	GGATG	5 cut(s)	379, 517, 958, 1057, 1069
BseJI	GATNNNNATC	3 cut(s)	39, 903, 909
BseLI	CCNNNNNNNGG	4 cut(s)	199, 223, 247, 572
BseMI	GCAATG	3 cut(s)	310, 918, 1146
BseMII	CTCAG	4 cut(s)	48, 114, 1029, 1158
BseNI	ACTGG	3 cut(s)	241, 286, 749
BseRI	GAGGAG	2 cut(s)	23, 1243
BseXI	GCAGC	8 cut(s)	256, 405, 853, 881, 884, 887, 899, 1163
BsgI	GTGCAG	2 cut(s)	60, 1293
Bsh1236I	CGCG	1 cut(s)	641
Bsh1285I	CGRYCG	1 cut(s)	796
BshFI	GGCC	2 cut(s)	49, 481
BshTI	ACCGGT	1 cut(s)	816
BshVI	ATCGAT	1 cut(s)	1197
BsiEI	CGRYCG	1 cut(s)	796
BsiHKAI	GWGCWC	1 cut(s)	237
BsiHKCI	CYCGRG	1 cut(s)	1225
BsiSI	CCGG	3 cut(s)	200, 446, 817
BslFI	GGGAC	3 cut(s)	362, 608, 737
BslI	CCNNNNNNNGG	4 cut(s)	199, 223, 247, 572
BsmAI	GTCTC	5 cut(s)	80, 625, 637, 970, 1125
BsmBI	CGTCTC	1 cut(s)	637
BsmFI	GGGAC	3 cut(s)	362, 608, 737
BsnI	GGCC	2 cut(s)	49, 481
Bso31I	GGTCTC	1 cut(s)	625
BsoBI	CYCGRG	1 cut(s)	1225
Bsp1286I	GDGCHC	2 cut(s)	237, 343
Bsp19I	CCATGG	1 cut(s)	222
BspACI	CCGC	3 cut(s)	119, 371, 1286
BspANI	GGCC	2 cut(s)	49, 481
BspCNI	CTCAG	4 cut(s)	49, 115, 1030, 1159
BspDI	ATCGAT	1 cut(s)	1197
BspFNI	CGCG	1 cut(s)	641
BspLI	GGNNCC	4 cut(s)	340, 444, 624, 1085
BspMAI	CTGCAG	2 cut(s)	871, 1189
BspMI	ACCTGC	1 cut(s)	82
BspPI	GGATC	4 cut(s)	158, 190, 802, 1013
BspTNI	GGTCTC	1 cut(s)	625
BsrDI	GCAATG	3 cut(s)	310, 918, 1146
BsrFI	RCCGGY	2 cut(s)	445, 816
BsrI	ACTGG	3 cut(s)	241, 286, 749
BssAI	RCCGGY	2 cut(s)	445, 816
BssECI	CCNNGG	3 cut(s)	222, 343, 1289
BssNAI	GTATAC	1 cut(s)	719
BssSI	CACGAG	1 cut(s)	949
BssT1I	CCWWGG	3 cut(s)	222, 343, 1289
Bst1107I	GTATAC	1 cut(s)	719
Bst2BI	CACGAG	1 cut(s)	949
Bst2UI	CCWGG	3 cut(s)	32, 51, 857
Bst4CI	ACNGT	9 cut(s)	91, 174, 353, 401, 476, 559, 981, 987, 1271
Bst6I	CTCTTC	1 cut(s)	597
BstDEI	CTNAG	5 cut(s)	57, 123, 618, 1038, 1167
BstDSI	CCRYGG	1 cut(s)	222
BstEII	GGTNACC	1 cut(s)	544
BstF5I	GGATG	5 cut(s)	379, 517, 958, 1057, 1069
BstFNI	CGCG	1 cut(s)	641
BstMAI	GTCTC	5 cut(s)	80, 625, 637, 970, 1125
BstMCI	CGRYCG	1 cut(s)	796
BstMWI	GCNNNNNNNGC	6 cut(s)	393, 654, 866, 872, 875, 884
BstNI	CCWGG	3 cut(s)	32, 51, 857
BstPI	GGTNACC	1 cut(s)	544
BstSCI	CCNGG	4 cut(s)	30, 49, 198, 855
BstSFI	CTRYAG	3 cut(s)	228, 867, 1185
BstUI	CGCG	1 cut(s)	641
BstV1I	GCAGC	8 cut(s)	256, 405, 853, 881, 884, 887, 899, 1163
BstX2I	RGATCY	2 cut(s)	128, 1005
BstYI	RGATCY	2 cut(s)	128, 1005
BstZ17I	GTATAC	1 cut(s)	719
Bsu15I	ATCGAT	1 cut(s)	1197
BsuI	GTATCC	1 cut(s)	1174
BsuRI	GGCC	2 cut(s)	49, 481
BsuTUI	ATCGAT	1 cut(s)	1197
BtgI	CCRYGG	1 cut(s)	222
BtgZI	GCGATG	1 cut(s)	348
BtrI	CACGTC	1 cut(s)	578
BtsCI	GGATG	5 cut(s)	379, 517, 958, 1057, 1069
BtsI	GCAGTG	1 cut(s)	394
BtsIMutI	CAGTG	2 cut(s)	394, 1276
BveI	ACCTGC	1 cut(s)	82
CaiI	CAGNNNCTG	1 cut(s)	755
Cfr10I	RCCGGY	2 cut(s)	445, 816
Cfr13I	GGNCC	3 cut(s)	47, 53, 622
ClaI	ATCGAT	1 cut(s)	1197
CseI	GACGC	1 cut(s)	654
Csp6I	GTAC	1 cut(s)	490
CspAI	ACCGGT	1 cut(s)	816
CviAII	CATG	3 cut(s)	223, 628, 1106
CviQI	GTAC	1 cut(s)	490
DdeI	CTNAG	5 cut(s)	57, 123, 618, 1038, 1167
Eam1104I	CTCTTC	1 cut(s)	597
EarI	CTCTTC	1 cut(s)	597
EciI	GGCGGA	1 cut(s)	1275
Ecl136II	GAGCTC	1 cut(s)	235
Eco130I	CCWWGG	3 cut(s)	222, 343, 1289
Eco24I	GRGCYC	2 cut(s)	237, 343
Eco31I	GGTCTC	1 cut(s)	625
Eco47I	GGWCC	2 cut(s)	53, 622
Eco53kI	GAGCTC	1 cut(s)	235
Eco57I	CTGAAG	1 cut(s)	156
Eco88I	CYCGRG	1 cut(s)	1225
Eco91I	GGTNACC	1 cut(s)	544
EcoICRI	GAGCTC	1 cut(s)	235
EcoO109I	RGGNCCY	1 cut(s)	622
EcoO65I	GGTNACC	1 cut(s)	544
EcoRII	CCWGG	3 cut(s)	30, 49, 855
EcoT14I	CCWWGG	3 cut(s)	222, 343, 1289
EcoT38I	GRGCYC	2 cut(s)	237, 343
ErhI	CCWWGG	3 cut(s)	222, 343, 1289
Esp3I	CGTCTC	1 cut(s)	637
FaeI	CATG	3 cut(s)	226, 631, 1109
FalI	AAGNNNNNCTT	2 cut(s)	667, 699
FaqI	GGGAC	3 cut(s)	362, 608, 737
FatI	CATG	3 cut(s)	222, 627, 1105
FauI	CCCGC	1 cut(s)	126
FbaI	TGATCA	1 cut(s)	969
FblI	GTMKAC	2 cut(s)	718, 1266
Fnu4HI	GCNGC	8 cut(s)	270, 394, 867, 870, 873, 876, 888, 1152
FokI	GGATG	5 cut(s)	386, 524, 945, 1056, 1064
FriOI	GRGCYC	2 cut(s)	237, 343
Fsp4HI	GCNGC	8 cut(s)	270, 394, 867, 870, 873, 876, 888, 1152
FspBI	CTAG	3 cut(s)	831, 861, 1290
GluI	GCNGC	8 cut(s)	270, 394, 867, 870, 873, 876, 888, 1152
HaeIII	GGCC	2 cut(s)	49, 481
HapII	CCGG	3 cut(s)	200, 446, 817
HgaI	GACGC	1 cut(s)	654
Hin1II	CATG	3 cut(s)	226, 631, 1109
HincII	GTYRAC	1 cut(s)	790
HindII	GTYRAC	1 cut(s)	790
HpaII	CCGG	3 cut(s)	200, 446, 817
HphI	GGTGA	4 cut(s)	17, 296, 445, 556
Hpy166II	GTNNAC	3 cut(s)	719, 790, 1267
Hpy188III	TCNNGA	9 cut(s)	56, 154, 193, 379, 926, 932, 967, 973, 1009
Hpy8I	GTNNAC	3 cut(s)	719, 790, 1267
Hpy99I	CGWCG	1 cut(s)	401
HpyAV	CCTTC	4 cut(s)	433, 929, 1227, 1290
HpyCH4III	ACNGT	9 cut(s)	91, 174, 353, 401, 476, 559, 981, 987, 1271
HpyCH4IV	ACGT	2 cut(s)	577, 715
HpyCH4V	TGCA	8 cut(s)	77, 277, 515, 869, 1001, 1151, 1187, 1274
HpyF10VI	GCNNNNNNNGC	6 cut(s)	393, 654, 866, 872, 875, 884
HpyF3I	CTNAG	5 cut(s)	57, 123, 618, 1038, 1167
HpySE526I	ACGT	2 cut(s)	577, 715
Hsp92II	CATG	3 cut(s)	226, 631, 1109
Ksp22I	TGATCA	1 cut(s)	969
LmnI	GCTCC	4 cut(s)	338, 442, 928, 1114
Lsp1109I	GCAGC	8 cut(s)	256, 405, 853, 881, 884, 887, 899, 1163
LweI	GCATC	4 cut(s)	502, 785, 899, 1042
MaeI	CTAG	3 cut(s)	831, 861, 1290
MaeII	ACGT	2 cut(s)	577, 715
MaeIII	GTNAC	7 cut(s)	142, 401, 498, 544, 559, 764, 981
MboII	GAAGA	3 cut(s)	123, 614, 713
MflI	RGATCY	2 cut(s)	128, 1005
MhlI	GDGCHC	2 cut(s)	237, 343
MluCI	AATT	6 cut(s)	94, 253, 504, 597, 669, 802
MlyI	GAGTC	6 cut(s)	68, 151, 795, 1060, 1127, 1180
MmeI	TCCRAC	1 cut(s)	94
MseI	TTAA	2 cut(s)	186, 813
MspA1I	CMGCKG	2 cut(s)	1037, 1154
MspI	CCGG	3 cut(s)	200, 446, 817
MspR9I	CCNGG	4 cut(s)	32, 51, 200, 857
MvaI	CCWGG	3 cut(s)	32, 51, 857
MvnI	CGCG	1 cut(s)	641
MwoI	GCNNNNNNNGC	6 cut(s)	393, 654, 866, 872, 875, 884
NciI	CCSGG	1 cut(s)	200
NcoI	CCATGG	1 cut(s)	222
NlaIII	CATG	3 cut(s)	226, 631, 1109
NlaIV	GGNNCC	4 cut(s)	340, 444, 624, 1085
NmeAIII	GCCGAG	1 cut(s)	139
NmuCI	GTSAC	3 cut(s)	142, 544, 559
PaeR7I	CTCGAG	1 cut(s)	1225
PfeI	GAWTC	5 cut(s)	40, 740, 954, 1199, 1277
PflFI	GACNNNGTC	1 cut(s)	1219
PflMI	CCANNNNNTGG	2 cut(s)	223, 247
PinAI	ACCGGT	1 cut(s)	816
PkrI	GCNGC	8 cut(s)	271, 395, 868, 871, 874, 877, 889, 1153
Ple19I	CGATCG	1 cut(s)	796
PleI	GAGTC	6 cut(s)	67, 151, 794, 1060, 1127, 1179
PpsI	GAGTC	6 cut(s)	67, 151, 794, 1060, 1127, 1179
PpuMI	RGGWCCY	1 cut(s)	622
PsiI	TTATAA	1 cut(s)	1160
Psp124BI	GAGCTC	1 cut(s)	237
Psp5II	RGGWCCY	1 cut(s)	622
Psp6I	CCWGG	3 cut(s)	30, 49, 855
PspEI	GGTNACC	1 cut(s)	544
PspGI	CCWGG	3 cut(s)	30, 49, 855
PspN4I	GGNNCC	4 cut(s)	340, 444, 624, 1085
PspPI	GGNCC	3 cut(s)	47, 53, 622
PspPPI	RGGWCCY	1 cut(s)	622
PspXI	VCTCGAGB	1 cut(s)	1225
PstI	CTGCAG	2 cut(s)	871, 1189
PstNI	CAGNNNCTG	1 cut(s)	755
PsuI	RGATCY	2 cut(s)	128, 1005
PsyI	GACNNNGTC	1 cut(s)	1219
PvuI	CGATCG	1 cut(s)	796
PvuII	CAGCTG	2 cut(s)	1037, 1154
RsaI	GTAC	1 cut(s)	491
RsaNI	GTAC	1 cut(s)	490
SacI	GAGCTC	1 cut(s)	237
SaqAI	TTAA	2 cut(s)	186, 813
SatI	GCNGC	8 cut(s)	270, 394, 867, 870, 873, 876, 888, 1152
Sau96I	GGNCC	3 cut(s)	47, 53, 622
SchI	GAGTC	6 cut(s)	68, 151, 795, 1060, 1127, 1180
ScrFI	CCNGG	4 cut(s)	32, 51, 200, 857
SduI	GDGCHC	2 cut(s)	237, 343
SfaNI	GCATC	4 cut(s)	502, 785, 899, 1042
SfcI	CTRYAG	3 cut(s)	228, 867, 1185
Sfr274I	CTCGAG	1 cut(s)	1225
SinI	GGWCC	2 cut(s)	53, 622
SlaI	CTCGAG	1 cut(s)	1225
SmlI	CTYRAG	3 cut(s)	658, 1141, 1225
SmoI	CTYRAG	3 cut(s)	658, 1141, 1225
Sse9I	AATT	6 cut(s)	94, 253, 504, 597, 669, 802
SsiI	CCGC	3 cut(s)	119, 371, 1286
SspMI	CTAG	3 cut(s)	831, 861, 1290
SstI	GAGCTC	1 cut(s)	237
StyD4I	CCNGG	4 cut(s)	30, 49, 198, 855
StyI	CCWWGG	3 cut(s)	222, 343, 1289
TaaI	ACNGT	9 cut(s)	91, 174, 353, 401, 476, 559, 981, 987, 1271
TaiI	ACGT	2 cut(s)	580, 718
TasI	AATT	6 cut(s)	94, 253, 504, 597, 669, 802
TfiI	GAWTC	5 cut(s)	40, 740, 954, 1199, 1277
Tru1I	TTAA	2 cut(s)	186, 813
Tru9I	TTAA	2 cut(s)	186, 813
TscAI	CASTG	2 cut(s)	394, 1276
TseFI	GTSAC	3 cut(s)	142, 544, 559
TseI	GCWGC	8 cut(s)	269, 393, 866, 869, 872, 875, 887, 1151
Tsp45I	GTSAC	3 cut(s)	142, 544, 559
TspDTI	ATGAA	1 cut(s)	41
TspGWI	ACGGA	1 cut(s)	1062
TspRI	CASTG	2 cut(s)	394, 1276
Tth111I	GACNNNGTC	1 cut(s)	1219
Van91I	CCANNNNNTGG	2 cut(s)	223, 247
VpaK11BI	GGWCC	2 cut(s)	53, 622
XapI	RAATTY	3 cut(s)	94, 253, 504
XhoI	CTCGAG	1 cut(s)	1225
XmaJI	CCTAGG	1 cut(s)	1289
XmiI	GTMKAC	2 cut(s)	718, 1266
XspI	CTAG	3 cut(s)	831, 861, 1290

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.