Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0004381

Physical Location & Seq

Genomic Coordinates Reverse (-)

24654733 .. 24656857

Gene Structure 2125 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG250300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1383 bp

ATGGGTGAGGAGACATCTGATGCAATGAACCTTGACCTGAATCTGGGTCCTGGCCCCGAGCCGGCTTCTGCCACCGTGTCGGATGAGCCTGTGAATTTGGAGAATTGGATTGACCAGCGGCCTATGCACCAAATGCCGGAAGTTTTTGGGATTAGTCCGTTTCGACGGAGATGGCCGCAACCTGCAGCGCATAATGTTTGGTCAGAAAGAACAAATGGCTTGTTAAATAGGATTCTGACATCTCGAGCACTGCGCAGAGAGCAAAATCAGTTGGCACAACCTGAAATTGTGGATGTTAAGCAAGACAACATTACTAGCCTTGATACAGGAGAAAACCGCCGGCTTCAGTCCATGCTACTTCGAAGAACACAATCACATAGAGCAACACTTTCTTCTCTGTCATCTGCGTTGAGTTCTGCTGAAAGGTTGGTGGAGGCATATTTCCATAACCATCCTATTACACCTGCAGTTAGAAATCAAGAATCGCCTCCCCCAGTTGATGATAGAGACTCTTTCTCGAGTAGTCAAGCTGTTATAAATTCAGAGAGTCAAATGGACACAGCTGTGGAAATCGATTCAATGGTTTCCCTTTCAGCTTCACCTTCCAGAAGAAGAAATGAAGCTTCAAGGGTTTCAGACATGGACAGTGAAGAGCCATGTGTTCAAACTTCAAAGATCGAGGGCCGATGCAGCATCGGCGATGCTACGCAAGATGACGACTCAAATCTTAAGATCCCTCTTAGGCCTCAAACACCGCGGGATGAAAGCTTGAGGCAAACTATTCAGAGGAGTGCATTTACTTTTCCCGTGGAGGAGATGATTCGACGCCTTGGAAGCAGATTTGATTTGTCTCAGGATTTGGTTCAGCCAACAGAAGATACTCCCGGAGAAACTGCAGCTGAAAGAACAAATGGCTTGTTAAATAGGATTCTAACATCTCGAGCACTGCGCAGAGAGCAAATTCAGTTGGCACAAACTGAAATTGTAGATTTAACGCAAGCCAACATTACTAGCCTTGATACAGCAGATAACCGCCGGCTTCAGTCCATGCTACTTCGAAGAACACGATCACATAGAGCAACACTTTCTTCTCTGTCATCTGCATTGAGTTCTGCTGAAAGGTTGGTGGAGGCATATTTCCATAACCATCCTATTACACCTGCAGTTAGAAATCAAGAGCCGCCTCCCCCAGTTGATGACAGAGACTCTTTCTCGAGTATTCAAGCTGTTATAAATTCAGAGAGTCAAATGGACACAGCTGTGGAAATCGATTCAATGGTTTCCCTTTCAACTTCATCTTCCAGAAGAAGAAATGAAGCTTCAAGGGTTTCAGACATGGACAGTGGACACTCCCGTGCCCCAAGAAGGAGAAGACTGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006508 GO:0006515 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0030163 GO:0031984 GO:0032446 GO:0032991 GO:0033554 GO:0034976 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0036513 GO:0042175 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051603 GO:0051716 GO:0051788 GO:0070647 GO:0070887 GO:0071218 GO:0071310 GO:0071704 GO:0071712 GO:0098796 GO:0098827 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

460

Amino Acids

51.58

Weight (kDa)

5.55

Isoelectric Point (pI)

80.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004381)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G58030 AT3G58030 AT3G58030 AT3G58030
fragaria_vesca	FvH4_6g22060
malus_domestica	MD02G1306100.v1.1 MD12G1055900.v1.1 MD14G1055900.v1.1 MD14G1056100.v1.1
prunus_persica	Prupe.7G079200_v2.0.a1
pyrus_communis	pycom12g04880
rosa_chinensis	RchiOBHm_Chr3g0479381 RchiOBHm_Chr3g0479391
rosa_laevigata	RLG00000023579
rosa_multiflora	Rmu_co8192992.1_g000001 Rmu_sc0000107.1_g000001 Rmu_sc0006208.1_g000003 Rmu_sc0006208.1_g000006
rosa_roxburghii	Rroxscaffold_6G00402310 Rroxscaffold_6G00402330 Rroxscaffold_6G00402350
rosa_rugosa	Rorug03G0174800 Rorug03G0174900
rosa_samantha	Rh3AG226000 Rh3AG226100 Rh3BG258700 Rh3BG258800 Rh3CG254800 Rh3CG255000 Rh3DG250300 Rh3DG250500
rosa_wichuraiana	Rw3G020180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	536, 1232
AarI	CACCTGC	2 cut(s)	472, 1168
Acc16I	TGCGCA	2 cut(s)	254, 950
Acc36I	ACCTGC	3 cut(s)	190, 472, 1168
AccII	CGCG	1 cut(s)	757
AciI	CCGC	7 cut(s)	118, 176, 337, 755, 757, 1033, 1181
AclWI	GGATC	1 cut(s)	727
AcoI	YGGCCR	1 cut(s)	173
AcsI	RAATTY	4 cut(s)	94, 538, 960, 1234
AcuI	CTGAAG	2 cut(s)	329, 1025
AcyI	GRCGYC	1 cut(s)	826
AfiI	CCNNNNNNNGG	4 cut(s)	43, 61, 136, 1365
AflII	CTTAAG	1 cut(s)	728
AgsI	TTSAA	8 cut(s)	579, 627, 665, 672, 1223, 1275, 1290, 1323
AjnI	CCWGG	1 cut(s)	49
AleI	CACNNNNGTG	3 cut(s)	563, 1259, 1353
AluBI	AGCT	9 cut(s)	530, 563, 596, 623, 768, 899, 1226, 1259, 1319
AluI	AGCT	9 cut(s)	530, 563, 596, 623, 768, 899, 1226, 1259, 1319
Alw21I	GWGCWC	2 cut(s)	250, 946
Alw26I	GTCTC	4 cut(s)	5, 501, 855, 1197
AlwI	GGATC	1 cut(s)	727
Ama87I	CYCGRG	5 cut(s)	56, 243, 517, 939, 1213
AoxI	GGCC	5 cut(s)	52, 119, 173, 682, 743
ApeKI	GCWGC	3 cut(s)	185, 690, 896
ApoI	RAATTY	4 cut(s)	94, 538, 960, 1234
AspLEI	GCGC	3 cut(s)	190, 255, 951
AspS9I	GGNCC	3 cut(s)	47, 53, 682
AsuC2I	CCSGG	1 cut(s)	885
AsuHPI	GGTGA	2 cut(s)	17, 591
AsuII	TTCGAA	2 cut(s)	361, 1057
AvaI	CYCGRG	5 cut(s)	56, 243, 517, 939, 1213
AvaII	GGWCC	1 cut(s)	47
BaeGI	GKGCMC	1 cut(s)	1360
BbsI	GAAGAC	1 cut(s)	1378
Bbv12I	GWGCWC	2 cut(s)	250, 946
BbvI	GCAGC	3 cut(s)	197, 702, 908
BccI	CCATC	3 cut(s)	165, 459, 1155
BciT130I	CCWGG	1 cut(s)	51
BcnI	CCSGG	1 cut(s)	885
BcoDI	GTCTC	4 cut(s)	5, 501, 855, 1197
BfaI	CTAG	2 cut(s)	315, 1011
BfmI	CTRYAG	4 cut(s)	183, 465, 894, 1161
BfrI	CTTAAG	1 cut(s)	728
BfuAI	ACCTGC	3 cut(s)	190, 472, 1168
BisI	GCNGC	6 cut(s)	119, 176, 186, 691, 897, 1181
BlsI	GCNGC	6 cut(s)	120, 177, 187, 692, 898, 1182
Bme1390I	CCNGG	2 cut(s)	51, 885
Bme18I	GGWCC	1 cut(s)	47
BmeT110I	CYCGRG	5 cut(s)	56, 243, 517, 939, 1213
BmgT120I	GGNCC	3 cut(s)	47, 53, 682
BmiI	GGNNCC	2 cut(s)	48, 55
BmrFI	CCNGG	2 cut(s)	51, 885
BmrI	ACTGGG	2 cut(s)	488, 1184
BmsI	GCATC	4 cut(s)	10, 677, 691, 702
BmuI	ACTGGG	2 cut(s)	488, 1184
BpiI	GAAGAC	1 cut(s)	1378
Bpu14I	TTCGAA	2 cut(s)	361, 1057
BpuEI	CTTGAG	1 cut(s)	790
BpuMI	CCSGG	1 cut(s)	885
Bsa29I	ATCGAT	2 cut(s)	573, 1269
BsaHI	GRCGYC	1 cut(s)	826
BsaJI	CCNNGG	3 cut(s)	755, 807, 829
Bsc4I	CCNNNNNNNGG	4 cut(s)	43, 61, 136, 1365
Bse118I	RCCGGY	3 cut(s)	61, 339, 1035
Bse1I	ACTGG	2 cut(s)	494, 1190
Bse3DI	GCAATG	1 cut(s)	30
BseBI	CCWGG	1 cut(s)	51
BseCI	ATCGAT	2 cut(s)	573, 1269
BseDI	CCNNGG	3 cut(s)	755, 807, 829
BseGI	GGATG	5 cut(s)	88, 298, 451, 766, 1147
BseLI	CCNNNNNNNGG	4 cut(s)	43, 61, 136, 1365
BseMI	GCAATG	1 cut(s)	30
BseMII	CTCAG	1 cut(s)	866
BseNI	ACTGG	2 cut(s)	494, 1190
BseRI	GAGGAG	3 cut(s)	23, 802, 827
BseSI	GKGCMC	1 cut(s)	1360
BseXI	GCAGC	3 cut(s)	197, 702, 908
Bsh1236I	CGCG	1 cut(s)	757
BshFI	GGCC	5 cut(s)	54, 121, 175, 684, 745
BshVI	ATCGAT	2 cut(s)	573, 1269
BsiHKAI	GWGCWC	2 cut(s)	250, 946
BsiHKCI	CYCGRG	5 cut(s)	56, 243, 517, 939, 1213
BsiSI	CCGG	5 cut(s)	62, 137, 340, 885, 1036
BslI	CCNNNNNNNGG	4 cut(s)	43, 61, 136, 1365
BsmAI	GTCTC	4 cut(s)	5, 501, 855, 1197
BsnI	GGCC	5 cut(s)	54, 121, 175, 684, 745
BsoBI	CYCGRG	5 cut(s)	56, 243, 517, 939, 1213
Bsp119I	TTCGAA	2 cut(s)	361, 1057
Bsp1286I	GDGCHC	3 cut(s)	250, 946, 1360
Bsp143I	GATC	3 cut(s)	675, 732, 1067
BspACI	CCGC	7 cut(s)	118, 176, 337, 755, 757, 1033, 1181
BspANI	GGCC	5 cut(s)	54, 121, 175, 684, 745
BspCNI	CTCAG	1 cut(s)	865
BspDI	ATCGAT	2 cut(s)	573, 1269
BspFNI	CGCG	1 cut(s)	757
BspLI	GGNNCC	2 cut(s)	48, 55
BspMAI	CTGCAG	4 cut(s)	187, 469, 898, 1165
BspMI	ACCTGC	3 cut(s)	190, 472, 1168
BspPI	GGATC	1 cut(s)	727
BspQI	GCTCTTC	1 cut(s)	645
BspT104I	TTCGAA	2 cut(s)	361, 1057
BspTI	CTTAAG	1 cut(s)	728
BsrDI	GCAATG	1 cut(s)	30
BsrFI	RCCGGY	3 cut(s)	61, 339, 1035
BsrI	ACTGG	2 cut(s)	494, 1190
BssAI	RCCGGY	3 cut(s)	61, 339, 1035
BssECI	CCNNGG	3 cut(s)	755, 807, 829
BssMI	GATC	3 cut(s)	675, 732, 1067
BssNI	GRCGYC	1 cut(s)	826
BssT1I	CCWWGG	1 cut(s)	829
Bst2UI	CCWGG	1 cut(s)	51
Bst4CI	ACNGT	3 cut(s)	76, 647, 1343
Bst6I	CTCTTC	1 cut(s)	645
BstACI	GRCGYC	1 cut(s)	826
BstAFI	CTTAAG	1 cut(s)	728
BstAPI	GCANNNNNTGC	1 cut(s)	133
BstBI	TTCGAA	2 cut(s)	361, 1057
BstC8I	GCNNGC	4 cut(s)	63, 341, 999, 1037
BstDEI	CTNAG	2 cut(s)	740, 852
BstDSI	CCRYGG	2 cut(s)	755, 807
BstF5I	GGATG	5 cut(s)	88, 298, 451, 766, 1147
BstFNI	CGCG	1 cut(s)	757
BstHHI	GCGC	3 cut(s)	190, 255, 951
BstKTI	GATC	3 cut(s)	678, 735, 1070
BstMAI	GTCTC	4 cut(s)	5, 501, 855, 1197
BstMBI	GATC	3 cut(s)	675, 732, 1067
BstMWI	GCNNNNNNNGC	7 cut(s)	124, 133, 259, 690, 696, 834, 955
BstNI	CCWGG	1 cut(s)	51
BstSCI	CCNGG	2 cut(s)	49, 883
BstSFI	CTRYAG	4 cut(s)	183, 465, 894, 1161
BstSLI	GKGCMC	1 cut(s)	1360
BstUI	CGCG	1 cut(s)	757
BstV1I	GCAGC	3 cut(s)	197, 702, 908
BstV2I	GAAGAC	1 cut(s)	1378
BstX2I	RGATCY	1 cut(s)	732
BstYI	RGATCY	1 cut(s)	732
Bsu15I	ATCGAT	2 cut(s)	573, 1269
BsuRI	GGCC	5 cut(s)	54, 121, 175, 684, 745
BsuTUI	ATCGAT	2 cut(s)	573, 1269
BtgI	CCRYGG	2 cut(s)	755, 807
BtgZI	GCGATG	1 cut(s)	714
BtsCI	GGATG	5 cut(s)	88, 298, 451, 766, 1147
BtsI	GCAGTG	2 cut(s)	248, 944
BtsIMutI	CAGTG	4 cut(s)	248, 652, 944, 1348
BveI	ACCTGC	3 cut(s)	190, 472, 1168
Cac8I	GCNNGC	4 cut(s)	63, 341, 999, 1037
CfoI	GCGC	3 cut(s)	190, 255, 951
Cfr10I	RCCGGY	3 cut(s)	61, 339, 1035
Cfr13I	GGNCC	3 cut(s)	47, 53, 682
Cfr42I	CCGCGG	1 cut(s)	758
ClaI	ATCGAT	2 cut(s)	573, 1269
CseI	GACGC	1 cut(s)	834
CviAII	CATG	5 cut(s)	352, 640, 657, 1048, 1336
DdeI	CTNAG	2 cut(s)	740, 852
DpnI	GATC	3 cut(s)	677, 734, 1069
DpnII	GATC	3 cut(s)	675, 732, 1067
EaeI	YGGCCR	1 cut(s)	173
Eam1104I	CTCTTC	1 cut(s)	645
EarI	CTCTTC	1 cut(s)	645
Eco130I	CCWWGG	1 cut(s)	829
Eco147I	AGGCCT	1 cut(s)	745
Eco47I	GGWCC	1 cut(s)	47
Eco57I	CTGAAG	2 cut(s)	329, 1025
Eco88I	CYCGRG	5 cut(s)	56, 243, 517, 939, 1213
EcoO109I	RGGNCCY	1 cut(s)	47
EcoRII	CCWGG	1 cut(s)	49
EcoT14I	CCWWGG	1 cut(s)	829
ErhI	CCWWGG	1 cut(s)	829
FaeI	CATG	5 cut(s)	355, 643, 660, 1051, 1339
FatI	CATG	5 cut(s)	351, 639, 656, 1047, 1335
FauI	CCCGC	1 cut(s)	750
Fnu4HI	GCNGC	6 cut(s)	119, 176, 186, 691, 897, 1181
FokI	GGATG	5 cut(s)	95, 305, 438, 773, 1134
Fsp4HI	GCNGC	6 cut(s)	119, 176, 186, 691, 897, 1181
FspBI	CTAG	2 cut(s)	315, 1011
FspI	TGCGCA	2 cut(s)	254, 950
GlaI	GCGC	3 cut(s)	189, 254, 950
GluI	GCNGC	6 cut(s)	119, 176, 186, 691, 897, 1181
HaeIII	GGCC	5 cut(s)	54, 121, 175, 684, 745
HapII	CCGG	5 cut(s)	62, 137, 340, 885, 1036
HgaI	GACGC	1 cut(s)	834
HhaI	GCGC	3 cut(s)	190, 255, 951
Hin1I	GRCGYC	1 cut(s)	826
Hin1II	CATG	5 cut(s)	355, 643, 660, 1051, 1339
Hin6I	GCGC	3 cut(s)	188, 253, 949
HinP1I	GCGC	3 cut(s)	188, 253, 949
HindIII	AAGCTT	3 cut(s)	621, 766, 1317
HpaII	CCGG	5 cut(s)	62, 137, 340, 885, 1036
HphI	GGTGA	2 cut(s)	17, 591
Hpy166II	GTNNAC	1 cut(s)	1346
Hpy188I	TCNGA	9 cut(s)	19, 82, 205, 237, 544, 637, 786, 1240, 1333
Hpy188III	TCNNGA	9 cut(s)	243, 479, 517, 606, 854, 939, 1175, 1213, 1302
Hpy8I	GTNNAC	1 cut(s)	1346
Hpy99I	CGWCG	2 cut(s)	168, 828
HpyAV	CCTTC	2 cut(s)	612, 1359
HpyCH4III	ACNGT	3 cut(s)	76, 647, 1343
HpyCH4V	TGCA	9 cut(s)	23, 127, 185, 467, 690, 794, 896, 1103, 1163
HpyF10VI	GCNNNNNNNGC	7 cut(s)	124, 133, 259, 690, 696, 834, 955
HpyF3I	CTNAG	2 cut(s)	740, 852
Hsp92I	GRCGYC	1 cut(s)	826
Hsp92II	CATG	5 cut(s)	355, 643, 660, 1051, 1339
HspAI	GCGC	3 cut(s)	188, 253, 949
KroI	GCCGGC	3 cut(s)	61, 339, 1035
KroNI	GCCGGC	3 cut(s)	63, 341, 1037
KspI	CCGCGG	1 cut(s)	758
Kzo9I	GATC	3 cut(s)	675, 732, 1067
LguI	GCTCTTC	1 cut(s)	645
Lsp1109I	GCAGC	3 cut(s)	197, 702, 908
LweI	GCATC	4 cut(s)	10, 677, 691, 702
MaeI	CTAG	2 cut(s)	315, 1011
MalI	GATC	3 cut(s)	677, 734, 1069
MboI	GATC	3 cut(s)	675, 732, 1067
MflI	RGATCY	1 cut(s)	732
MhlI	GDGCHC	3 cut(s)	250, 946, 1360
MluCI	AATT	7 cut(s)	94, 103, 285, 538, 960, 981, 1234
MlyI	GAGTC	5 cut(s)	503, 556, 713, 1199, 1252
MmeI	TCCRAC	1 cut(s)	60
MroNI	GCCGGC	3 cut(s)	61, 339, 1035
MseI	TTAA	5 cut(s)	224, 297, 729, 920, 992
MslI	CAYNNNNRTG	3 cut(s)	563, 1259, 1353
MspA1I	CMGCKG	5 cut(s)	118, 563, 757, 899, 1259
MspCI	CTTAAG	1 cut(s)	728
MspI	CCGG	5 cut(s)	62, 137, 340, 885, 1036
MspR9I	CCNGG	2 cut(s)	51, 885
MvaI	CCWGG	1 cut(s)	51
MvnI	CGCG	1 cut(s)	757
MwoI	GCNNNNNNNGC	7 cut(s)	124, 133, 259, 690, 696, 834, 955
NaeI	GCCGGC	3 cut(s)	63, 341, 1037
NciI	CCSGG	1 cut(s)	885
NdeII	GATC	3 cut(s)	675, 732, 1067
NgoMIV	GCCGGC	3 cut(s)	61, 339, 1035
NlaIII	CATG	5 cut(s)	355, 643, 660, 1051, 1339
NlaIV	GGNNCC	2 cut(s)	48, 55
NsbI	TGCGCA	2 cut(s)	254, 950
NspV	TTCGAA	2 cut(s)	361, 1057
OliI	CACNNNNGTG	3 cut(s)	563, 1259, 1353
PaeR7I	CTCGAG	4 cut(s)	243, 517, 939, 1213
PaqCI	CACCTGC	2 cut(s)	472, 1168
PceI	AGGCCT	1 cut(s)	745
PciSI	GCTCTTC	1 cut(s)	645
PcsI	WCGNNNNNNNCGW	1 cut(s)	1063
PdiI	GCCGGC	3 cut(s)	63, 341, 1037
PfeI	GAWTC	7 cut(s)	40, 232, 482, 575, 820, 928, 1271
PfoI	TCCNGGA	1 cut(s)	883
PkrI	GCNGC	6 cut(s)	120, 177, 187, 692, 898, 1182
PleI	GAGTC	5 cut(s)	503, 555, 713, 1199, 1251
PpsI	GAGTC	5 cut(s)	503, 555, 713, 1199, 1251
PpuMI	RGGWCCY	1 cut(s)	47
PsiI	TTATAA	2 cut(s)	536, 1232
Psp5II	RGGWCCY	1 cut(s)	47
Psp6I	CCWGG	1 cut(s)	49
PspGI	CCWGG	1 cut(s)	49
PspN4I	GGNNCC	2 cut(s)	48, 55
PspPI	GGNCC	3 cut(s)	47, 53, 682
PspPPI	RGGWCCY	1 cut(s)	47
PstI	CTGCAG	4 cut(s)	187, 469, 898, 1165
PsuI	RGATCY	1 cut(s)	732
PvuII	CAGCTG	3 cut(s)	563, 899, 1259
RseI	CAYNNNNRTG	3 cut(s)	563, 1259, 1353
SacII	CCGCGG	1 cut(s)	758
SapI	GCTCTTC	1 cut(s)	645
SaqAI	TTAA	5 cut(s)	224, 297, 729, 920, 992
SatI	GCNGC	6 cut(s)	119, 176, 186, 691, 897, 1181
Sau3AI	GATC	3 cut(s)	675, 732, 1067
Sau96I	GGNCC	3 cut(s)	47, 53, 682
SchI	GAGTC	5 cut(s)	503, 556, 713, 1199, 1252
ScrFI	CCNGG	2 cut(s)	51, 885
SduI	GDGCHC	3 cut(s)	250, 946, 1360
SfaNI	GCATC	4 cut(s)	10, 677, 691, 702
SfcI	CTRYAG	4 cut(s)	183, 465, 894, 1161
Sfr274I	CTCGAG	4 cut(s)	243, 517, 939, 1213
Sfr303I	CCGCGG	1 cut(s)	758
SfuI	TTCGAA	2 cut(s)	361, 1057
SgrBI	CCGCGG	1 cut(s)	758
SinI	GGWCC	1 cut(s)	47
SlaI	CTCGAG	4 cut(s)	243, 517, 939, 1213
SmiMI	CAYNNNNRTG	3 cut(s)	563, 1259, 1353
SmlI	CTYRAG	6 cut(s)	243, 517, 728, 769, 939, 1213
SmoI	CTYRAG	6 cut(s)	243, 517, 728, 769, 939, 1213
Sse9I	AATT	7 cut(s)	94, 103, 285, 538, 960, 981, 1234
SseBI	AGGCCT	1 cut(s)	745
SsiI	CCGC	7 cut(s)	118, 176, 337, 755, 757, 1033, 1181
SspMI	CTAG	2 cut(s)	315, 1011
StuI	AGGCCT	1 cut(s)	745
StyD4I	CCNGG	2 cut(s)	49, 883
StyI	CCWWGG	1 cut(s)	829
TaaI	ACNGT	3 cut(s)	76, 647, 1343
TasI	AATT	7 cut(s)	94, 103, 285, 538, 960, 981, 1234
TauI	GCSGC	3 cut(s)	121, 178, 1183
TfiI	GAWTC	7 cut(s)	40, 232, 482, 575, 820, 928, 1271
Tru1I	TTAA	5 cut(s)	224, 297, 729, 920, 992
Tru9I	TTAA	5 cut(s)	224, 297, 729, 920, 992
TscAI	CASTG	4 cut(s)	255, 652, 951, 1348
TseI	GCWGC	3 cut(s)	185, 690, 896
TspDTI	ATGAA	5 cut(s)	41, 633, 777, 1284, 1329
TspGWI	ACGGA	2 cut(s)	147, 181
TspRI	CASTG	4 cut(s)	255, 652, 951, 1348
Vha464I	CTTAAG	1 cut(s)	728
VpaK11BI	GGWCC	1 cut(s)	47
XapI	RAATTY	4 cut(s)	94, 538, 960, 1234
XhoI	CTCGAG	4 cut(s)	243, 517, 939, 1213
XspI	CTAG	2 cut(s)	315, 1011

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.