Ferredoxin-fold anticodon binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G58140 |
| fragaria_vesca | FvH4_3g12680 FvH4_3g12680 FvH4_3g12680 |
| malus_domestica | MD05G1248600.v1.1 MD10G1229100.v1.1 |
| prunus_persica | Prupe.4G115500_v2.0.a1 |
| pyrus_communis | pycom05g22530 pycom10g19270 |
| rosa_chinensis | RchiOBHm_Chr3g0486261 RchiOBHm_Chr5g0020641 |
| rosa_laevigata | RLG00000023089 RLG00000032549 |
| rosa_multiflora | Rmu_sc0001857.1_g000018 Rmu_sc0005607.1_g000020 Rmu_sc0005842.1_g000003 Rmu_sc0007661.1_g000010 |
| rosa_roxburghii | Rroxscaffold_1G00057630 Rroxscaffold_6G00395930 |
| rosa_rugosa | Rorug03G0224300 Rorug03G0224400 Rorug03G0224500 Rorug05G0062200 |
| rosa_samantha | Rh3AG274300 Rh3BG309600 Rh3CG308800 Rh5AG151900 Rh5BG151600 Rh5CG162900 Rh5DG150800 |
| rosa_wichuraiana | Rw0G022550 Rw3G024320 Rw5G013460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1223 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 598 |
| AccBSI | CCGCTC | 1 cut(s) | 1204 |
| AccI | GTMKAC | 1 cut(s) | 456 |
| AciI | CCGC | 3 cut(s) | 108, 111, 1204 |
| AclWI | GGATC | 2 cut(s) | 209, 1116 |
| AcsI | RAATTY | 1 cut(s) | 998 |
| AcuI | CTGAAG | 1 cut(s) | 16 |
| AcyI | GRCGYC | 1 cut(s) | 177 |
| AfaI | GTAC | 2 cut(s) | 231, 449 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 598, 1198, 1203 |
| AflIII | ACRYGT | 1 cut(s) | 444 |
| AgsI | TTSAA | 5 cut(s) | 73, 679, 1003, 1014, 1118 |
| AjiI | CACGTC | 1 cut(s) | 966 |
| AluBI | AGCT | 6 cut(s) | 50, 265, 500, 505, 775, 1270 |
| AluI | AGCT | 6 cut(s) | 50, 265, 500, 505, 775, 1270 |
| Alw21I | GWGCWC | 1 cut(s) | 493 |
| Alw26I | GTCTC | 3 cut(s) | 160, 892, 1212 |
| AlwI | GGATC | 2 cut(s) | 209, 1116 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1047 |
| Ama87I | CYCGRG | 1 cut(s) | 58 |
| AoxI | GGCC | 1 cut(s) | 876 |
| ApeKI | GCWGC | 2 cut(s) | 262, 665 |
| ApoI | RAATTY | 1 cut(s) | 998 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 559 |
| AspS9I | GGNCC | 1 cut(s) | 876 |
| AsuC2I | CCSGG | 1 cut(s) | 541 |
| AsuHPI | GGTGA | 5 cut(s) | 214, 485, 835, 1135, 1135 |
| AsuII | TTCGAA | 1 cut(s) | 357 |
| AvaI | CYCGRG | 1 cut(s) | 58 |
| AxyI | CCTNAGG | 1 cut(s) | 624 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 128, 160 |
| BbsI | GAAGAC | 2 cut(s) | 366, 801 |
| Bbv12I | GWGCWC | 1 cut(s) | 493 |
| BbvCI | CCTCAGC | 1 cut(s) | 669 |
| BbvI | GCAGC | 2 cut(s) | 274, 652 |
| BccI | CCATC | 4 cut(s) | 592, 600, 726, 772 |
| BciVI | GTATCC | 1 cut(s) | 1029 |
| BclI | TGATCA | 1 cut(s) | 418 |
| BcnI | CCSGG | 1 cut(s) | 541 |
| BcoDI | GTCTC | 3 cut(s) | 160, 892, 1212 |
| BfaI | CTAG | 3 cut(s) | 189, 254, 407 |
| BfmI | CTRYAG | 1 cut(s) | 1235 |
| BfuI | GTATCC | 1 cut(s) | 1029 |
| BisI | GCNGC | 3 cut(s) | 111, 263, 666 |
| BlpI | GCTNAGC | 1 cut(s) | 501 |
| BlsI | GCNGC | 3 cut(s) | 112, 264, 667 |
| Bme1390I | CCNGG | 1 cut(s) | 541 |
| BmeT110I | CYCGRG | 1 cut(s) | 58 |
| BmgBI | CACGTC | 1 cut(s) | 966 |
| BmgT120I | GGNCC | 1 cut(s) | 876 |
| BmrFI | CCNGG | 1 cut(s) | 541 |
| BmrI | ACTGGG | 1 cut(s) | 964 |
| BmsI | GCATC | 1 cut(s) | 292 |
| BmuI | ACTGGG | 1 cut(s) | 964 |
| BpiI | GAAGAC | 2 cut(s) | 366, 801 |
| Bpu10I | CCTNAGC | 1 cut(s) | 669 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 501 |
| Bpu14I | TTCGAA | 1 cut(s) | 357 |
| BpuEI | CTTGAG | 3 cut(s) | 710, 797, 914 |
| BpuMI | CCSGG | 1 cut(s) | 541 |
| BsaAI | YACGTR | 1 cut(s) | 447 |
| BsaBI | GATNNNNATC | 2 cut(s) | 282, 293 |
| BsaHI | GRCGYC | 1 cut(s) | 177 |
| BsaI | GGTCTC | 1 cut(s) | 1212 |
| BsaJI | CCNNGG | 2 cut(s) | 540, 1197 |
| BsaWI | WCCGGW | 1 cut(s) | 583 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 598, 1198, 1203 |
| Bse1I | ACTGG | 3 cut(s) | 635, 803, 970 |
| Bse21I | CCTNAGG | 1 cut(s) | 624 |
| Bse3DI | GCAATG | 1 cut(s) | 70 |
| Bse8I | GATNNNNATC | 2 cut(s) | 282, 293 |
| BseDI | CCNNGG | 2 cut(s) | 540, 1197 |
| BseGI | GGATG | 4 cut(s) | 217, 283, 550, 947 |
| BseJI | GATNNNNATC | 2 cut(s) | 282, 293 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 598, 1198, 1203 |
| BseMI | GCAATG | 1 cut(s) | 70 |
| BseMII | CTCAG | 4 cut(s) | 27, 492, 615, 660 |
| BseNI | ACTGG | 3 cut(s) | 635, 803, 970 |
| BseRI | GAGGAG | 1 cut(s) | 1235 |
| BseXI | GCAGC | 2 cut(s) | 274, 652 |
| BseYI | CCCAGC | 1 cut(s) | 1103 |
| BsgI | GTGCAG | 1 cut(s) | 1280 |
| BshFI | GGCC | 1 cut(s) | 878 |
| BsiHKAI | GWGCWC | 1 cut(s) | 493 |
| BsiHKCI | CYCGRG | 1 cut(s) | 58 |
| BsiSI | CCGG | 2 cut(s) | 540, 584 |
| BslFI | GGGAC | 2 cut(s) | 395, 952 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 598, 1198, 1203 |
| BsmAI | GTCTC | 3 cut(s) | 160, 892, 1212 |
| BsmBI | CGTCTC | 1 cut(s) | 160 |
| BsmFI | GGGAC | 2 cut(s) | 395, 952 |
| BsmI | GAATGC | 1 cut(s) | 264 |
| BsnI | GGCC | 1 cut(s) | 878 |
| Bso31I | GGTCTC | 1 cut(s) | 1212 |
| BsoBI | CYCGRG | 1 cut(s) | 58 |
| Bsp119I | TTCGAA | 1 cut(s) | 357 |
| Bsp1286I | GDGCHC | 1 cut(s) | 493 |
| Bsp143I | GATC | 4 cut(s) | 214, 418, 1108, 1231 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 501 |
| Bsp19I | CCATGG | 1 cut(s) | 1197 |
| BspACI | CCGC | 3 cut(s) | 108, 111, 1204 |
| BspANI | GGCC | 1 cut(s) | 878 |
| BspCNI | CTCAG | 4 cut(s) | 26, 493, 616, 661 |
| BspMAI | CTGCAG | 1 cut(s) | 1239 |
| BspPI | GGATC | 2 cut(s) | 209, 1116 |
| BspQI | GCTCTTC | 1 cut(s) | 57 |
| BspT104I | TTCGAA | 1 cut(s) | 357 |
| BspTNI | GGTCTC | 1 cut(s) | 1212 |
| BsrBI | CCGCTC | 1 cut(s) | 1204 |
| BsrDI | GCAATG | 1 cut(s) | 70 |
| BsrI | ACTGG | 3 cut(s) | 635, 803, 970 |
| BssECI | CCNNGG | 2 cut(s) | 540, 1197 |
| BssMI | GATC | 4 cut(s) | 214, 418, 1108, 1231 |
| BssNI | GRCGYC | 1 cut(s) | 177 |
| BssT1I | CCWWGG | 1 cut(s) | 1197 |
| Bst4CI | ACNGT | 2 cut(s) | 7, 469 |
| Bst6I | CTCTTC | 4 cut(s) | 57, 268, 550, 1113 |
| BstACI | GRCGYC | 1 cut(s) | 177 |
| BstBAI | YACGTR | 1 cut(s) | 447 |
| BstBI | TTCGAA | 1 cut(s) | 357 |
| BstC8I | GCNNGC | 1 cut(s) | 703 |
| BstDEI | CTNAG | 4 cut(s) | 13, 501, 624, 669 |
| BstDSI | CCRYGG | 1 cut(s) | 1197 |
| BstEII | GGTNACC | 1 cut(s) | 823 |
| BstF5I | GGATG | 4 cut(s) | 217, 283, 550, 947 |
| BstKTI | GATC | 4 cut(s) | 217, 421, 1111, 1234 |
| BstMAI | GTCTC | 3 cut(s) | 160, 892, 1212 |
| BstMBI | GATC | 4 cut(s) | 214, 418, 1108, 1231 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 47, 497, 1267 |
| BstPI | GGTNACC | 1 cut(s) | 823 |
| BstSCI | CCNGG | 1 cut(s) | 539 |
| BstSFI | CTRYAG | 1 cut(s) | 1235 |
| BstV1I | GCAGC | 2 cut(s) | 274, 652 |
| BstV2I | GAAGAC | 2 cut(s) | 366, 801 |
| BstX2I | RGATCY | 1 cut(s) | 1108 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 713 |
| BstYI | RGATCY | 1 cut(s) | 1108 |
| Bsu36I | CCTNAGG | 1 cut(s) | 624 |
| BsuI | GTATCC | 1 cut(s) | 1029 |
| BsuRI | GGCC | 1 cut(s) | 878 |
| BtgI | CCRYGG | 1 cut(s) | 1197 |
| BtrI | CACGTC | 1 cut(s) | 966 |
| BtsCI | GGATG | 4 cut(s) | 217, 283, 550, 947 |
| Cac8I | GCNNGC | 1 cut(s) | 703 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1047 |
| Cfr13I | GGNCC | 1 cut(s) | 876 |
| CseI | GACGC | 2 cut(s) | 128, 166 |
| Csp6I | GTAC | 2 cut(s) | 230, 448 |
| CviAII | CATG | 2 cut(s) | 422, 1198 |
| CviQI | GTAC | 2 cut(s) | 230, 448 |
| DdeI | CTNAG | 4 cut(s) | 13, 501, 624, 669 |
| DpnI | GATC | 4 cut(s) | 216, 420, 1110, 1233 |
| DpnII | GATC | 4 cut(s) | 214, 418, 1108, 1231 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1223 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1223 |
| Eam1104I | CTCTTC | 4 cut(s) | 57, 268, 550, 1113 |
| EarI | CTCTTC | 4 cut(s) | 57, 268, 550, 1113 |
| EciI | GGCGGA | 1 cut(s) | 97 |
| Eco130I | CCWWGG | 1 cut(s) | 1197 |
| Eco31I | GGTCTC | 1 cut(s) | 1212 |
| Eco57I | CTGAAG | 1 cut(s) | 16 |
| Eco81I | CCTNAGG | 1 cut(s) | 624 |
| Eco88I | CYCGRG | 1 cut(s) | 58 |
| Eco91I | GGTNACC | 1 cut(s) | 823 |
| EcoO65I | GGTNACC | 1 cut(s) | 823 |
| EcoT14I | CCWWGG | 1 cut(s) | 1197 |
| ErhI | CCWWGG | 1 cut(s) | 1197 |
| Esp3I | CGTCTC | 1 cut(s) | 160 |
| FaeI | CATG | 2 cut(s) | 425, 1201 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 377, 409, 972, 1004 |
| FaqI | GGGAC | 2 cut(s) | 395, 952 |
| FatI | CATG | 2 cut(s) | 421, 1197 |
| FbaI | TGATCA | 1 cut(s) | 418 |
| FblI | GTMKAC | 1 cut(s) | 456 |
| Fnu4HI | GCNGC | 3 cut(s) | 111, 263, 666 |
| FokI | GGATG | 4 cut(s) | 224, 270, 557, 934 |
| Fsp4HI | GCNGC | 3 cut(s) | 111, 263, 666 |
| FspBI | CTAG | 3 cut(s) | 189, 254, 407 |
| GluI | GCNGC | 3 cut(s) | 111, 263, 666 |
| GsaI | CCCAGC | 1 cut(s) | 1107 |
| HaeIII | GGCC | 1 cut(s) | 878 |
| HapII | CCGG | 2 cut(s) | 540, 584 |
| HgaI | GACGC | 2 cut(s) | 128, 166 |
| Hin1I | GRCGYC | 1 cut(s) | 177 |
| Hin1II | CATG | 2 cut(s) | 425, 1201 |
| HinfI | GANTC | 9 cut(s) | 236, 326, 458, 560, 569, 650, 960, 1168, 1182 |
| HpaII | CCGG | 2 cut(s) | 540, 584 |
| HphI | GGTGA | 5 cut(s) | 214, 485, 835, 1135, 1135 |
| Hpy166II | GTNNAC | 4 cut(s) | 24, 457, 550, 1065 |
| Hpy188I | TCNGA | 5 cut(s) | 288, 597, 843, 884, 952 |
| Hpy188III | TCNNGA | 4 cut(s) | 58, 623, 689, 1048 |
| Hpy8I | GTNNAC | 4 cut(s) | 24, 457, 550, 1065 |
| Hpy99I | CGWCG | 2 cut(s) | 144, 182 |
| HpyAV | CCTTC | 2 cut(s) | 596, 889 |
| HpyCH4III | ACNGT | 2 cut(s) | 7, 469 |
| HpyCH4IV | ACGT | 2 cut(s) | 446, 965 |
| HpyCH4V | TGCA | 3 cut(s) | 262, 1237, 1261 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 47, 497, 1267 |
| HpyF3I | CTNAG | 4 cut(s) | 13, 501, 624, 669 |
| HpySE526I | ACGT | 2 cut(s) | 446, 965 |
| Hsp92I | GRCGYC | 1 cut(s) | 177 |
| Hsp92II | CATG | 2 cut(s) | 425, 1201 |
| Ksp22I | TGATCA | 1 cut(s) | 418 |
| Kzo9I | GATC | 4 cut(s) | 214, 418, 1108, 1231 |
| LguI | GCTCTTC | 1 cut(s) | 57 |
| LmnI | GCTCC | 1 cut(s) | 1201 |
| Lsp1109I | GCAGC | 2 cut(s) | 274, 652 |
| LweI | GCATC | 1 cut(s) | 292 |
| MaeI | CTAG | 3 cut(s) | 189, 254, 407 |
| MaeII | ACGT | 2 cut(s) | 446, 965 |
| MaeIII | GTNAC | 5 cut(s) | 376, 535, 823, 1028, 1175 |
| MalI | GATC | 4 cut(s) | 216, 420, 1110, 1233 |
| MbiI | CCGCTC | 1 cut(s) | 1204 |
| MboI | GATC | 4 cut(s) | 214, 418, 1108, 1231 |
| MfeI | CAATTG | 1 cut(s) | 372 |
| MflI | RGATCY | 1 cut(s) | 1108 |
| MhlI | GDGCHC | 1 cut(s) | 493 |
| MluCI | AATT | 9 cut(s) | 331, 372, 837, 998, 1075, 1098, 1131, 1139, 1280 |
| MlyI | GAGTC | 3 cut(s) | 452, 563, 1177 |
| MmeI | TCCRAC | 2 cut(s) | 242, 783 |
| MroXI | GAANNNNTTC | 1 cut(s) | 559 |
| MseI | TTAA | 5 cut(s) | 299, 438, 789, 1130, 1283 |
| MslI | CAYNNNNRTG | 1 cut(s) | 486 |
| MspI | CCGG | 2 cut(s) | 540, 584 |
| MspR9I | CCNGG | 1 cut(s) | 541 |
| MunI | CAATTG | 1 cut(s) | 372 |
| Mva1269I | GAATGC | 1 cut(s) | 264 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 47, 497, 1267 |
| NciI | CCSGG | 1 cut(s) | 541 |
| NcoI | CCATGG | 1 cut(s) | 1197 |
| NdeII | GATC | 4 cut(s) | 214, 418, 1108, 1231 |
| NlaIII | CATG | 2 cut(s) | 425, 1201 |
| NmuCI | GTSAC | 1 cut(s) | 823 |
| NspV | TTCGAA | 1 cut(s) | 357 |
| PaeR7I | CTCGAG | 1 cut(s) | 58 |
| PciSI | GCTCTTC | 1 cut(s) | 57 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 312 |
| PctI | GAATGC | 1 cut(s) | 264 |
| PdmI | GAANNNNTTC | 1 cut(s) | 559 |
| PfeI | GAWTC | 6 cut(s) | 236, 326, 560, 650, 960, 1182 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 598 |
| PkrI | GCNGC | 3 cut(s) | 112, 264, 667 |
| PleI | GAGTC | 3 cut(s) | 452, 563, 1176 |
| PpsI | GAGTC | 3 cut(s) | 452, 563, 1176 |
| Ppu21I | YACGTR | 1 cut(s) | 447 |
| PspEI | GGTNACC | 1 cut(s) | 823 |
| PspFI | CCCAGC | 1 cut(s) | 1103 |
| PspPI | GGNCC | 1 cut(s) | 876 |
| PstI | CTGCAG | 1 cut(s) | 1239 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1047 |
| PsuI | RGATCY | 1 cut(s) | 1108 |
| RsaI | GTAC | 2 cut(s) | 231, 449 |
| RsaNI | GTAC | 2 cut(s) | 230, 448 |
| RseI | CAYNNNNRTG | 1 cut(s) | 486 |
| SapI | GCTCTTC | 1 cut(s) | 57 |
| SaqAI | TTAA | 5 cut(s) | 299, 438, 789, 1130, 1283 |
| SatI | GCNGC | 3 cut(s) | 111, 263, 666 |
| Sau3AI | GATC | 4 cut(s) | 214, 418, 1108, 1231 |
| Sau96I | GGNCC | 1 cut(s) | 876 |
| SchI | GAGTC | 3 cut(s) | 452, 563, 1177 |
| ScrFI | CCNGG | 1 cut(s) | 541 |
| SduI | GDGCHC | 1 cut(s) | 493 |
| SfaNI | GCATC | 1 cut(s) | 292 |
| SfcI | CTRYAG | 1 cut(s) | 1235 |
| Sfr274I | CTCGAG | 1 cut(s) | 58 |
| SfuI | TTCGAA | 1 cut(s) | 357 |
| SlaI | CTCGAG | 1 cut(s) | 58 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 486 |
| SmlI | CTYRAG | 4 cut(s) | 58, 689, 776, 893 |
| SmoI | CTYRAG | 4 cut(s) | 58, 689, 776, 893 |
| Sse9I | AATT | 9 cut(s) | 331, 372, 837, 998, 1075, 1098, 1131, 1139, 1280 |
| SsiI | CCGC | 3 cut(s) | 108, 111, 1204 |
| SspMI | CTAG | 3 cut(s) | 189, 254, 407 |
| StyD4I | CCNGG | 1 cut(s) | 539 |
| StyI | CCWWGG | 1 cut(s) | 1197 |
| TaaI | ACNGT | 2 cut(s) | 7, 469 |
| TaiI | ACGT | 2 cut(s) | 449, 968 |
| TaqI | TCGA | 5 cut(s) | 37, 59, 239, 357, 1278 |
| TaqII | GACCGA | 1 cut(s) | 842 |
| TasI | AATT | 9 cut(s) | 331, 372, 837, 998, 1075, 1098, 1131, 1139, 1280 |
| TauI | GCSGC | 1 cut(s) | 113 |
| TfiI | GAWTC | 6 cut(s) | 236, 326, 560, 650, 960, 1182 |
| Tru1I | TTAA | 5 cut(s) | 299, 438, 789, 1130, 1283 |
| Tru9I | TTAA | 5 cut(s) | 299, 438, 789, 1130, 1283 |
| TseFI | GTSAC | 1 cut(s) | 823 |
| TseI | GCWGC | 2 cut(s) | 262, 665 |
| Tsp45I | GTSAC | 1 cut(s) | 823 |
| TspDTI | ATGAA | 2 cut(s) | 72, 969 |
| TspGWI | ACGGA | 3 cut(s) | 34, 1181, 1229 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 598 |
| XapI | RAATTY | 1 cut(s) | 998 |
| XhoI | CTCGAG | 1 cut(s) | 58 |
| XmiI | GTMKAC | 1 cut(s) | 456 |
| XmnI | GAANNNNTTC | 1 cut(s) | 559 |
| XspI | CTAG | 3 cut(s) | 189, 254, 407 |