phenylalanine--tRNA ligase, chloroplastic
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G58140 |
| fragaria_vesca | FvH4_3g12680 FvH4_3g12680 FvH4_3g12680 |
| malus_domestica | MD05G1248600.v1.1 MD10G1229100.v1.1 |
| prunus_persica | Prupe.4G115500_v2.0.a1 |
| pyrus_communis | pycom05g22530 pycom10g19270 |
| rosa_chinensis | RchiOBHm_Chr3g0486261 RchiOBHm_Chr5g0020641 |
| rosa_laevigata | RLG00000023089 RLG00000032549 |
| rosa_multiflora | Rmu_sc0001857.1_g000018 Rmu_sc0005607.1_g000020 Rmu_sc0005842.1_g000003 Rmu_sc0007661.1_g000010 |
| rosa_roxburghii | Rroxscaffold_1G00057630 Rroxscaffold_6G00395930 |
| rosa_rugosa | Rorug03G0224300 Rorug03G0224400 Rorug03G0224500 Rorug05G0062200 |
| rosa_samantha | Rh3AG274300 Rh3BG309600 Rh3CG308800 Rh5AG151900 Rh5BG151600 Rh5CG162900 Rh5DG150800 |
| rosa_wichuraiana | Rw0G022550 Rw3G024320 Rw5G013460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 582 |
| AccB1I | GGYRCC | 1 cut(s) | 621 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 742 |
| AccBSI | CCGCTC | 1 cut(s) | 1042 |
| AccIII | TCCGGA | 1 cut(s) | 376 |
| AciI | CCGC | 4 cut(s) | 196, 321, 963, 1042 |
| AclWI | GGATC | 1 cut(s) | 1202 |
| AcsI | RAATTY | 2 cut(s) | 438, 535 |
| AcuI | CTGAAG | 1 cut(s) | 464 |
| AcvI | CACGTG | 1 cut(s) | 568 |
| AcyI | GRCGYC | 2 cut(s) | 108, 324 |
| AfaI | GTAC | 2 cut(s) | 695, 1384 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 742, 1344 |
| AgsI | TTSAA | 7 cut(s) | 42, 823, 917, 988, 1064, 1123, 1147 |
| AluBI | AGCT | 7 cut(s) | 216, 254, 316, 397, 812, 1132, 1411 |
| AluI | AGCT | 7 cut(s) | 216, 254, 316, 397, 812, 1132, 1411 |
| Alw21I | GWGCWC | 2 cut(s) | 318, 637 |
| Alw26I | GTCTC | 1 cut(s) | 99 |
| AlwI | GGATC | 1 cut(s) | 1202 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 785, 1314 |
| Aor13HI | TCCGGA | 1 cut(s) | 376 |
| ApeKI | GCWGC | 4 cut(s) | 251, 292, 779, 1129 |
| ApoI | RAATTY | 2 cut(s) | 438, 535 |
| AspLEI | GCGC | 2 cut(s) | 310, 876 |
| AspS9I | GGNCC | 2 cut(s) | 751, 1335 |
| AsuHPI | GGTGA | 1 cut(s) | 1262 |
| AsuII | TTCGAA | 1 cut(s) | 1157 |
| AvaII | GGWCC | 2 cut(s) | 751, 1335 |
| BanI | GGYRCC | 1 cut(s) | 621 |
| BanII | GRGCYC | 1 cut(s) | 318 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 649, 681 |
| BbrPI | CACGTG | 1 cut(s) | 568 |
| Bbv12I | GWGCWC | 2 cut(s) | 318, 637 |
| BbvCI | CCTCAGC | 2 cut(s) | 813, 1260 |
| BbvI | GCAGC | 4 cut(s) | 263, 304, 791, 1141 |
| BccI | CCATC | 4 cut(s) | 716, 736, 744, 916 |
| BceAI | ACGGC | 1 cut(s) | 159 |
| BciVI | GTATCC | 2 cut(s) | 373, 1173 |
| BclI | TGATCA | 1 cut(s) | 562 |
| BcoDI | GTCTC | 1 cut(s) | 99 |
| BfaI | CTAG | 1 cut(s) | 102 |
| BfmI | CTRYAG | 1 cut(s) | 249 |
| BfoI | RGCGCY | 1 cut(s) | 311 |
| BfuI | GTATCC | 2 cut(s) | 373, 1173 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 837 |
| BisI | GCNGC | 6 cut(s) | 252, 293, 322, 780, 1043, 1130 |
| BlsI | GCNGC | 6 cut(s) | 253, 294, 323, 781, 1044, 1131 |
| Bme18I | GGWCC | 2 cut(s) | 751, 1335 |
| BmgT120I | GGNCC | 2 cut(s) | 751, 1335 |
| BmiI | GGNNCC | 2 cut(s) | 623, 752 |
| BmsI | GCATC | 3 cut(s) | 784, 791, 861 |
| BpmI | CTGGAG | 3 cut(s) | 332, 705, 750 |
| Bpu10I | CCTNAGC | 2 cut(s) | 813, 1260 |
| Bpu14I | TTCGAA | 1 cut(s) | 1157 |
| BpuEI | CTTGAG | 2 cut(s) | 854, 941 |
| BsaAI | YACGTR | 1 cut(s) | 568 |
| BsaHI | GRCGYC | 2 cut(s) | 108, 324 |
| BsaJI | CCNNGG | 1 cut(s) | 1338 |
| BsaWI | WCCGGW | 1 cut(s) | 376 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 177, 207 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 742, 1344 |
| Bse118I | RCCGGY | 1 cut(s) | 1247 |
| Bse1I | ACTGG | 3 cut(s) | 296, 688, 1308 |
| Bse3DI | GCAATG | 1 cut(s) | 1056 |
| BseAI | TCCGGA | 1 cut(s) | 376 |
| BseDI | CCNNGG | 1 cut(s) | 1338 |
| BseGI | GGATG | 1 cut(s) | 361 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 742, 1344 |
| BseMI | GCAATG | 1 cut(s) | 1056 |
| BseMII | CTCAG | 4 cut(s) | 38, 223, 804, 1251 |
| BseNI | ACTGG | 3 cut(s) | 296, 688, 1308 |
| BseRI | GAGGAG | 3 cut(s) | 12, 1277, 1376 |
| BseXI | GCAGC | 4 cut(s) | 263, 304, 791, 1141 |
| BseYI | CCCAGC | 2 cut(s) | 876, 1132 |
| BshNI | GGYRCC | 1 cut(s) | 621 |
| BsiHKAI | GWGCWC | 2 cut(s) | 318, 637 |
| BsiSI | CCGG | 2 cut(s) | 377, 1248 |
| BslFI | GGGAC | 1 cut(s) | 110 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 742, 1344 |
| BsmAI | GTCTC | 1 cut(s) | 99 |
| BsmBI | CGTCTC | 1 cut(s) | 99 |
| BsmFI | GGGAC | 1 cut(s) | 110 |
| BsmI | GAATGC | 2 cut(s) | 408, 454 |
| Bsp119I | TTCGAA | 1 cut(s) | 1157 |
| Bsp1286I | GDGCHC | 2 cut(s) | 318, 637 |
| Bsp13I | TCCGGA | 1 cut(s) | 376 |
| Bsp143I | GATC | 6 cut(s) | 421, 505, 562, 1194, 1252, 1365 |
| Bsp19I | CCATGG | 1 cut(s) | 1338 |
| BspACI | CCGC | 4 cut(s) | 196, 321, 963, 1042 |
| BspCNI | CTCAG | 4 cut(s) | 37, 222, 805, 1252 |
| BspEI | TCCGGA | 1 cut(s) | 376 |
| BspLI | GGNNCC | 2 cut(s) | 623, 752 |
| BspMAI | CTGCAG | 1 cut(s) | 253 |
| BspPI | GGATC | 1 cut(s) | 1202 |
| BspT104I | TTCGAA | 1 cut(s) | 1157 |
| BspT107I | GGYRCC | 1 cut(s) | 621 |
| BsrBI | CCGCTC | 1 cut(s) | 1042 |
| BsrDI | GCAATG | 1 cut(s) | 1056 |
| BsrFI | RCCGGY | 1 cut(s) | 1247 |
| BsrI | ACTGG | 3 cut(s) | 296, 688, 1308 |
| BssAI | RCCGGY | 1 cut(s) | 1247 |
| BssECI | CCNNGG | 1 cut(s) | 1338 |
| BssMI | GATC | 6 cut(s) | 421, 505, 562, 1194, 1252, 1365 |
| BssNI | GRCGYC | 2 cut(s) | 108, 324 |
| BssT1I | CCWWGG | 1 cut(s) | 1338 |
| Bst4CI | ACNGT | 6 cut(s) | 166, 613, 698, 1316, 1347, 1387 |
| Bst6I | CTCTTC | 6 cut(s) | 80, 176, 244, 412, 652, 983 |
| BstACI | GRCGYC | 2 cut(s) | 108, 324 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 257 |
| BstBAI | YACGTR | 1 cut(s) | 568 |
| BstBI | TTCGAA | 1 cut(s) | 1157 |
| BstC8I | GCNNGC | 3 cut(s) | 847, 1047, 1409 |
| BstDEI | CTNAG | 4 cut(s) | 24, 209, 813, 1260 |
| BstDSI | CCRYGG | 1 cut(s) | 1338 |
| BstF5I | GGATG | 1 cut(s) | 361 |
| BstH2I | RGCGCY | 1 cut(s) | 311 |
| BstHHI | GCGC | 2 cut(s) | 310, 876 |
| BstKTI | GATC | 6 cut(s) | 424, 508, 565, 1197, 1255, 1368 |
| BstMAI | GTCTC | 1 cut(s) | 99 |
| BstMBI | GATC | 6 cut(s) | 421, 505, 562, 1194, 1252, 1365 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 257, 403, 641, 788, 837, 846 |
| BstSFI | CTRYAG | 1 cut(s) | 249 |
| BstV1I | GCAGC | 4 cut(s) | 263, 304, 791, 1141 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 774, 857 |
| BsuI | GTATCC | 2 cut(s) | 373, 1173 |
| BtgI | CCRYGG | 1 cut(s) | 1338 |
| BtsCI | GGATG | 1 cut(s) | 361 |
| BtsIMutI | CAGTG | 4 cut(s) | 303, 1204, 1209, 1312 |
| Cac8I | GCNNGC | 3 cut(s) | 847, 1047, 1409 |
| CaiI | CAGNNNCTG | 2 cut(s) | 785, 1314 |
| CfoI | GCGC | 2 cut(s) | 310, 876 |
| Cfr10I | RCCGGY | 1 cut(s) | 1247 |
| Cfr13I | GGNCC | 2 cut(s) | 751, 1335 |
| CseI | GACGC | 2 cut(s) | 116, 313 |
| Csp6I | GTAC | 2 cut(s) | 694, 1383 |
| CviAII | CATG | 1 cut(s) | 1339 |
| CviQI | GTAC | 2 cut(s) | 694, 1383 |
| DdeI | CTNAG | 4 cut(s) | 24, 209, 813, 1260 |
| DpnI | GATC | 6 cut(s) | 423, 507, 564, 1196, 1254, 1367 |
| DpnII | GATC | 6 cut(s) | 421, 505, 562, 1194, 1252, 1365 |
| Eam1104I | CTCTTC | 6 cut(s) | 80, 176, 244, 412, 652, 983 |
| EarI | CTCTTC | 6 cut(s) | 80, 176, 244, 412, 652, 983 |
| Ecl136II | GAGCTC | 1 cut(s) | 316 |
| Eco130I | CCWWGG | 1 cut(s) | 1338 |
| Eco24I | GRGCYC | 1 cut(s) | 318 |
| Eco47I | GGWCC | 2 cut(s) | 751, 1335 |
| Eco53kI | GAGCTC | 1 cut(s) | 316 |
| Eco57I | CTGAAG | 1 cut(s) | 464 |
| Eco72I | CACGTG | 1 cut(s) | 568 |
| EcoICRI | GAGCTC | 1 cut(s) | 316 |
| EcoRI | GAATTC | 1 cut(s) | 438 |
| EcoT14I | CCWWGG | 1 cut(s) | 1338 |
| EcoT38I | GRGCYC | 1 cut(s) | 318 |
| ErhI | CCWWGG | 1 cut(s) | 1338 |
| Esp3I | CGTCTC | 1 cut(s) | 99 |
| FaeI | CATG | 1 cut(s) | 1342 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 1406 |
| FaqI | GGGAC | 1 cut(s) | 110 |
| FatI | CATG | 1 cut(s) | 1338 |
| FbaI | TGATCA | 1 cut(s) | 562 |
| Fnu4HI | GCNGC | 6 cut(s) | 252, 293, 322, 780, 1043, 1130 |
| FokI | GGATG | 1 cut(s) | 368 |
| FriOI | GRGCYC | 1 cut(s) | 318 |
| Fsp4HI | GCNGC | 6 cut(s) | 252, 293, 322, 780, 1043, 1130 |
| FspBI | CTAG | 1 cut(s) | 102 |
| GlaI | GCGC | 2 cut(s) | 309, 875 |
| GluI | GCNGC | 6 cut(s) | 252, 293, 322, 780, 1043, 1130 |
| GsaI | CCCAGC | 2 cut(s) | 880, 1136 |
| GsuI | CTGGAG | 3 cut(s) | 332, 705, 750 |
| HaeII | RGCGCY | 1 cut(s) | 311 |
| HapII | CCGG | 2 cut(s) | 377, 1248 |
| HgaI | GACGC | 2 cut(s) | 116, 313 |
| HhaI | GCGC | 2 cut(s) | 310, 876 |
| Hin1I | GRCGYC | 2 cut(s) | 108, 324 |
| Hin1II | CATG | 1 cut(s) | 1342 |
| Hin6I | GCGC | 2 cut(s) | 308, 874 |
| HinP1I | GCGC | 2 cut(s) | 308, 874 |
| HincII | GTYRAC | 1 cut(s) | 1092 |
| HindII | GTYRAC | 1 cut(s) | 1092 |
| HindIII | AAGCTT | 2 cut(s) | 214, 395 |
| HinfI | GANTC | 7 cut(s) | 15, 571, 602, 704, 713, 1137, 1202 |
| HpaII | CCGG | 2 cut(s) | 377, 1248 |
| HphI | GGTGA | 1 cut(s) | 1262 |
| Hpy166II | GTNNAC | 5 cut(s) | 30, 601, 694, 1092, 1107 |
| Hpy188I | TCNGA | 6 cut(s) | 80, 212, 265, 444, 741, 1028 |
| Hpy188III | TCNNGA | 7 cut(s) | 97, 328, 377, 767, 935, 985, 1423 |
| Hpy8I | GTNNAC | 5 cut(s) | 30, 601, 694, 1092, 1107 |
| HpyAV | CCTTC | 3 cut(s) | 232, 740, 1408 |
| HpyCH4III | ACNGT | 6 cut(s) | 166, 613, 698, 1316, 1347, 1387 |
| HpyCH4IV | ACGT | 1 cut(s) | 567 |
| HpyCH4V | TGCA | 8 cut(s) | 251, 392, 406, 412, 797, 1270, 1328, 1378 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 257, 403, 641, 788, 837, 846 |
| HpyF3I | CTNAG | 4 cut(s) | 24, 209, 813, 1260 |
| HpySE526I | ACGT | 1 cut(s) | 567 |
| Hsp92I | GRCGYC | 2 cut(s) | 108, 324 |
| Hsp92II | CATG | 1 cut(s) | 1342 |
| HspAI | GCGC | 2 cut(s) | 308, 874 |
| Kpn2I | TCCGGA | 1 cut(s) | 376 |
| Ksp22I | TGATCA | 1 cut(s) | 562 |
| Kzo9I | GATC | 6 cut(s) | 421, 505, 562, 1194, 1252, 1365 |
| LmnI | GCTCC | 2 cut(s) | 313, 1039 |
| Lsp1109I | GCAGC | 4 cut(s) | 263, 304, 791, 1141 |
| LweI | GCATC | 3 cut(s) | 784, 791, 861 |
| MaeI | CTAG | 1 cut(s) | 102 |
| MaeII | ACGT | 1 cut(s) | 567 |
| MaeIII | GTNAC | 7 cut(s) | 298, 679, 967, 1172, 1310, 1316, 1347 |
| MalI | GATC | 6 cut(s) | 423, 507, 564, 1196, 1254, 1367 |
| MbiI | CCGCTC | 1 cut(s) | 1042 |
| MboI | GATC | 6 cut(s) | 421, 505, 562, 1194, 1252, 1365 |
| MfeI | CAATTG | 1 cut(s) | 1271 |
| MhlI | GDGCHC | 2 cut(s) | 318, 637 |
| MluCI | AATT | 7 cut(s) | 37, 384, 438, 535, 1219, 1271, 1282 |
| MlyI | GAGTC | 4 cut(s) | 580, 596, 707, 1146 |
| MmeI | TCCRAC | 1 cut(s) | 927 |
| MroI | TCCGGA | 1 cut(s) | 376 |
| MseI | TTAA | 3 cut(s) | 11, 218, 528 |
| MslI | CAYNNNNRTG | 1 cut(s) | 630 |
| MspA1I | CMGCKG | 1 cut(s) | 1132 |
| MspI | CCGG | 2 cut(s) | 377, 1248 |
| MunI | CAATTG | 1 cut(s) | 1271 |
| Mva1269I | GAATGC | 2 cut(s) | 408, 454 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 257, 403, 641, 788, 837, 846 |
| NcoI | CCATGG | 1 cut(s) | 1338 |
| NdeII | GATC | 6 cut(s) | 421, 505, 562, 1194, 1252, 1365 |
| NlaIII | CATG | 1 cut(s) | 1342 |
| NlaIV | GGNNCC | 2 cut(s) | 623, 752 |
| NmeAIII | GCCGAG | 1 cut(s) | 297 |
| NmuCI | GTSAC | 3 cut(s) | 298, 1310, 1347 |
| NspV | TTCGAA | 1 cut(s) | 1157 |
| PctI | GAATGC | 2 cut(s) | 408, 454 |
| PfeI | GAWTC | 3 cut(s) | 15, 704, 1202 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 742 |
| PkrI | GCNGC | 6 cut(s) | 253, 294, 323, 781, 1044, 1131 |
| PleI | GAGTC | 4 cut(s) | 579, 596, 707, 1145 |
| PmaCI | CACGTG | 1 cut(s) | 568 |
| PmlI | CACGTG | 1 cut(s) | 568 |
| PpsI | GAGTC | 4 cut(s) | 579, 596, 707, 1145 |
| Ppu21I | YACGTR | 1 cut(s) | 568 |
| PsiI | TTATAA | 1 cut(s) | 582 |
| Psp124BI | GAGCTC | 1 cut(s) | 318 |
| PspCI | CACGTG | 1 cut(s) | 568 |
| PspFI | CCCAGC | 2 cut(s) | 876, 1132 |
| PspN4I | GGNNCC | 2 cut(s) | 623, 752 |
| PspPI | GGNCC | 2 cut(s) | 751, 1335 |
| PstI | CTGCAG | 1 cut(s) | 253 |
| PstNI | CAGNNNCTG | 2 cut(s) | 785, 1314 |
| PvuII | CAGCTG | 1 cut(s) | 1132 |
| RsaI | GTAC | 2 cut(s) | 695, 1384 |
| RsaNI | GTAC | 2 cut(s) | 694, 1383 |
| RseI | CAYNNNNRTG | 1 cut(s) | 630 |
| SacI | GAGCTC | 1 cut(s) | 318 |
| SaqAI | TTAA | 3 cut(s) | 11, 218, 528 |
| SatI | GCNGC | 6 cut(s) | 252, 293, 322, 780, 1043, 1130 |
| Sau3AI | GATC | 6 cut(s) | 421, 505, 562, 1194, 1252, 1365 |
| Sau96I | GGNCC | 2 cut(s) | 751, 1335 |
| SchI | GAGTC | 4 cut(s) | 580, 596, 707, 1146 |
| SduI | GDGCHC | 2 cut(s) | 318, 637 |
| SfaNI | GCATC | 3 cut(s) | 784, 791, 861 |
| SfcI | CTRYAG | 1 cut(s) | 249 |
| SfuI | TTCGAA | 1 cut(s) | 1157 |
| SinI | GGWCC | 2 cut(s) | 751, 1335 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 630 |
| SmlI | CTYRAG | 3 cut(s) | 833, 920, 1423 |
| SmoI | CTYRAG | 3 cut(s) | 833, 920, 1423 |
| Sse9I | AATT | 7 cut(s) | 37, 384, 438, 535, 1219, 1271, 1282 |
| SsiI | CCGC | 4 cut(s) | 196, 321, 963, 1042 |
| SspMI | CTAG | 1 cut(s) | 102 |
| SstI | GAGCTC | 1 cut(s) | 318 |
| StyI | CCWWGG | 1 cut(s) | 1338 |
| TaaI | ACNGT | 6 cut(s) | 166, 613, 698, 1316, 1347, 1387 |
| TaiI | ACGT | 1 cut(s) | 570 |
| TaqI | TCGA | 4 cut(s) | 501, 574, 711, 1157 |
| TasI | AATT | 7 cut(s) | 37, 384, 438, 535, 1219, 1271, 1282 |
| TauI | GCSGC | 2 cut(s) | 324, 1045 |
| TfiI | GAWTC | 3 cut(s) | 15, 704, 1202 |
| Tru1I | TTAA | 3 cut(s) | 11, 218, 528 |
| Tru9I | TTAA | 3 cut(s) | 11, 218, 528 |
| TscAI | CASTG | 4 cut(s) | 303, 1204, 1216, 1319 |
| TseFI | GTSAC | 3 cut(s) | 298, 1310, 1347 |
| TseI | GCWGC | 4 cut(s) | 251, 292, 779, 1129 |
| Tsp45I | GTSAC | 3 cut(s) | 298, 1310, 1347 |
| TspDTI | ATGAA | 1 cut(s) | 474 |
| TspGWI | ACGGA | 2 cut(s) | 743, 1158 |
| TspRI | CASTG | 4 cut(s) | 303, 1204, 1216, 1319 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 742 |
| VpaK11BI | GGWCC | 2 cut(s) | 751, 1335 |
| XapI | RAATTY | 2 cut(s) | 438, 535 |
| XspI | CTAG | 1 cut(s) | 102 |