Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009030

Physical Location & Seq

Genomic Coordinates Forward (+)

23289243 .. 23291486

Gene Structure 2244 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G63010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGGCTGGTGGTAACGAAGTCAACCTTAACGAATGCAAGAGAATTGTCCCACTCAACACATGGGTCCTCATTTCCAATTTCAAGCTTGCTTACAAAGTCCTCCGTCGCCCTGACGGTTCTTTCAACCGCGACCTCGCCGAGTTCCTTGACCGTAAAGTTCCCGCCAACTCTTTCCCCCTCGACGGCGTTTTCTCCTTCGACCACGTCGACTCAACAACTAACCTTCTCACCAGAATCTACCAACCTGCGTCTCTCCTTCATCAGACCCGTCACGGAACCCTCGAGCTAACCAAACCTCTCAGTACTACAGAGATCGTCCCTGTTCTCATTTTCTTCCATGGAGGCAGCTTCACTCATTCCTCCGCCAATAGTGCTATCTACGACACTTTCTGCCGACGCCTTGTCACCATTTGCGGTGTTGTTGTTGTCTCTGTTGATTACCGGAGATCCCCTGAGCATCGCTACCCTTGTGCTTACGACGATGGATGGAACGCTCTCAACTGGGTCAAGTCCAGAGTCTGGCTTCAGAGTGGTAAAGACTCCAATGTTTATGTTTATTTGGCTGGAGATAGCTCTGGAGGCAACATTGCTCACAATGTCGCTGTCAGAGCTACCAATGAAGGAGTCAAAGTGTTGGGGAACATTCTTCTTCATCCAATGTTTGGTGGACAGGAGAGGACTCAGTCTGAGAAGACCCTTGATGGCAAATACTTTGTGACTATACAAGATCGAGATTGGTATTGGAGGGCTTATCTACCGGAAGGTGAAGATAGAGATCATCCAGCATGTAATCCCTTTGGCCCGAGAGGTCAAAGCCTTAAAGGAGTCAACTTTCCAAAGAGTCTTGTTGTTGTCGCTGGTTTAGATCTTGTTCAAGATTGGCAATTAGCCTATGTGGATGGGCTTAAGAAGACTGGTCTTGAAGTCAATCTTTTGTATTTGAAACAAGCTACCATTGGCTTTTACTTCTTGCCTAACAATGATCACTTTCATTGTCTTATGGAAGAGTTGAATAAGTTTGTGCACTCCATAGAGGATTCTCAAAGCAAGTCAAGTCCTGTGCTTCTTACTCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005975 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009311 GO:0009312 GO:0009653 GO:0009719 GO:0009725 GO:0009739 GO:0009755 GO:0009791 GO:0009892 GO:0009908 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010154 GO:0010325 GO:0010331 GO:0010468 GO:0010476 GO:0010605 GO:0010629 GO:0010646 GO:0010647 GO:0016051 GO:0016787 GO:0019222 GO:0019840 GO:0022414 GO:0023051 GO:0023052 GO:0023056 GO:0031406 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036094 GO:0042221 GO:0042562 GO:0043167 GO:0043168 GO:0043177 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044238 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048518 GO:0048519 GO:0048522 GO:0048530 GO:0048583 GO:0048584 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:0080154 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1901576 GO:1901700 GO:1901701 GO:1905392 GO:1905516 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Abhydrolase_3

Protein Analysis

358

Amino Acids

40.3

Weight (kDa)

6.86

Isoelectric Point (pI)

45.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BD-FAE	PF20434	95 - 207	2.8e-11	BD-FAE
COesterase	PF00135	100 - 204	5.8e-07	Carboxylesterase family
Abhydrolase_3	PF07859	109 - 322	1.2e-61	alpha/beta hydrolase fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63010
fragaria_vesca	FvH4_2g24370 FvH4_2g24370 FvH4_3g11720
malus_domestica	MD03G1273300.v1.1 MD11G1296000.v1.1
prunus_persica	Prupe.8G249800_v2.0.a1 Prupe.8G249800_v2.0.a1 Prupe.8G249800_v2.0.a1 Prupe.8G249800_v2.0.a1
pyrus_communis	pycom03g21780 pycom11g26050
rosa_chinensis	RchiOBHm_Chr6g0292241
rosa_laevigata	RLG00000012050
rosa_multiflora	Rmu_sc0002993.1_g000009
rosa_roxburghii	Rroxscaffold_7G00175310
rosa_rugosa	Rorug06G0224800
rosa_samantha	Rh6AG337800 Rh6BG345100 Rh6CG352200 Rh6DG338100
rosa_wichuraiana	Rw6G029420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	253
AccB7I	CCANNNNNTGG	2 cut(s)	519, 662
AccI	GTMKAC	1 cut(s)	207
AccII	CGCG	1 cut(s)	129
AciI	CCGC	4 cut(s)	127, 162, 363, 414
AclWI	GGATC	1 cut(s)	441
AcuI	CTGAAG	1 cut(s)	509
AcyI	GRCGYC	1 cut(s)	397
AfaI	GTAC	1 cut(s)	304
AfiI	CCNNNNNNNGG	3 cut(s)	182, 519, 662
AflII	CTTAAG	1 cut(s)	905
AgsI	TTSAA	6 cut(s)	82, 124, 875, 923, 943, 1012
AhdI	GACNNNNNGTC	1 cut(s)	401
AjiI	CACGTC	1 cut(s)	205
AluBI	AGCT	6 cut(s)	85, 286, 348, 573, 611, 950
AluI	AGCT	6 cut(s)	85, 286, 348, 573, 611, 950
Alw21I	GWGCWC	1 cut(s)	1026
Alw26I	GTCTC	2 cut(s)	255, 433
Alw44I	GTGCAC	1 cut(s)	1022
AlwI	GGATC	1 cut(s)	441
AlwNI	CAGNNNCTG	1 cut(s)	519
Ama87I	CYCGRG	2 cut(s)	281, 802
AoxI	GGCC	1 cut(s)	799
ApaLI	GTGCAC	1 cut(s)	1022
ApeKI	GCWGC	1 cut(s)	345
AspS9I	GGNCC	2 cut(s)	64, 800
AsuHPI	GGTGA	3 cut(s)	220, 397, 776
AvaI	CYCGRG	2 cut(s)	281, 802
AvaII	GGWCC	1 cut(s)	64
BaeGI	GKGCMC	1 cut(s)	1026
BbsI	GAAGAC	2 cut(s)	698, 917
Bbv12I	GWGCWC	1 cut(s)	1026
BbvI	GCAGC	1 cut(s)	357
BccI	CCATC	4 cut(s)	476, 480, 695, 893
BceAI	ACGGC	1 cut(s)	199
BclI	TGATCA	1 cut(s)	982
BcoDI	GTCTC	2 cut(s)	255, 433
BfmI	CTRYAG	1 cut(s)	306
BfrI	CTTAAG	1 cut(s)	905
BfuAI	ACCTGC	1 cut(s)	253
BglII	AGATCT	1 cut(s)	865
BisI	GCNGC	1 cut(s)	346
BlsI	GCNGC	1 cut(s)	347
BmcAI	AGTACT	1 cut(s)	304
Bme18I	GGWCC	1 cut(s)	64
BmeRI	GACNNNNNGTC	1 cut(s)	401
BmeT110I	CYCGRG	2 cut(s)	281, 802
BmgBI	CACGTC	1 cut(s)	205
BmgT120I	GGNCC	2 cut(s)	64, 800
BmiI	GGNNCC	2 cut(s)	65, 277
BmrI	ACTGGG	1 cut(s)	511
BmsI	GCATC	1 cut(s)	466
BmuI	ACTGGG	1 cut(s)	511
BpiI	GAAGAC	2 cut(s)	698, 917
BpmI	CTGGAG	2 cut(s)	585, 597
Bpu10I	CCTNAGC	1 cut(s)	453
BsaBI	GATNNNNATC	1 cut(s)	774
BsaHI	GRCGYC	1 cut(s)	397
BsaJI	CCNNGG	1 cut(s)	337
BsaWI	WCCGGW	2 cut(s)	441, 757
BsaXI	ACNNNNNCTCC	2 cut(s)	615, 645
Bsc4I	CCNNNNNNNGG	3 cut(s)	182, 519, 662
Bse1I	ACTGG	2 cut(s)	506, 919
Bse3DI	GCAATG	1 cut(s)	585
Bse8I	GATNNNNATC	1 cut(s)	774
BseDI	CCNNGG	1 cut(s)	337
BseGI	GGATG	4 cut(s)	491, 652, 778, 904
BseJI	GATNNNNATC	1 cut(s)	774
BseLI	CCNNNNNNNGG	3 cut(s)	182, 519, 662
BseMI	GCAATG	1 cut(s)	585
BseMII	CTCAG	4 cut(s)	313, 444, 678, 695
BseNI	ACTGG	2 cut(s)	506, 919
BseSI	GKGCMC	1 cut(s)	1026
BseXI	GCAGC	1 cut(s)	357
Bsh1236I	CGCG	1 cut(s)	129
BshFI	GGCC	1 cut(s)	801
BsiHKAI	GWGCWC	1 cut(s)	1026
BsiHKCI	CYCGRG	2 cut(s)	281, 802
BsiSI	CCGG	2 cut(s)	442, 758
BslFI	GGGAC	2 cut(s)	32, 302
BslI	CCNNNNNNNGG	3 cut(s)	182, 519, 662
BsmAI	GTCTC	2 cut(s)	255, 433
BsmBI	CGTCTC	1 cut(s)	255
BsmFI	GGGAC	2 cut(s)	32, 302
BsmI	GAATGC	1 cut(s)	38
BsnI	GGCC	1 cut(s)	801
BsoBI	CYCGRG	2 cut(s)	281, 802
Bsp1286I	GDGCHC	1 cut(s)	1026
Bsp143I	GATC	6 cut(s)	312, 446, 727, 775, 865, 982
Bsp19I	CCATGG	1 cut(s)	337
BspACI	CCGC	4 cut(s)	127, 162, 363, 414
BspANI	GGCC	1 cut(s)	801
BspCNI	CTCAG	4 cut(s)	312, 445, 679, 694
BspFNI	CGCG	1 cut(s)	129
BspLI	GGNNCC	2 cut(s)	65, 277
BspMI	ACCTGC	1 cut(s)	253
BspPI	GGATC	1 cut(s)	441
BspTI	CTTAAG	1 cut(s)	905
BsrDI	GCAATG	1 cut(s)	585
BsrI	ACTGG	2 cut(s)	506, 919
BssECI	CCNNGG	1 cut(s)	337
BssMI	GATC	6 cut(s)	312, 446, 727, 775, 865, 982
BssNI	GRCGYC	1 cut(s)	397
BssT1I	CCWWGG	1 cut(s)	337
Bst4CI	ACNGT	2 cut(s)	116, 152
Bst6I	CTCTTC	1 cut(s)	999
BstACI	GRCGYC	1 cut(s)	397
BstAFI	CTTAAG	1 cut(s)	905
BstC8I	GCNNGC	1 cut(s)	87
BstDEI	CTNAG	5 cut(s)	299, 453, 681, 687, 1074
BstDSI	CCRYGG	1 cut(s)	337
BstF5I	GGATG	4 cut(s)	491, 652, 778, 904
BstFNI	CGCG	1 cut(s)	129
BstKTI	GATC	6 cut(s)	315, 449, 730, 778, 868, 985
BstMAI	GTCTC	2 cut(s)	255, 433
BstMBI	GATC	6 cut(s)	312, 446, 727, 775, 865, 982
BstMWI	GCNNNNNNNGC	3 cut(s)	371, 579, 608
BstNSI	RCATGY	1 cut(s)	789
BstSFI	CTRYAG	1 cut(s)	306
BstSLI	GKGCMC	1 cut(s)	1026
BstUI	CGCG	1 cut(s)	129
BstV1I	GCAGC	1 cut(s)	357
BstV2I	GAAGAC	2 cut(s)	698, 917
BstX2I	RGATCY	2 cut(s)	446, 865
BstYI	RGATCY	2 cut(s)	446, 865
BsuRI	GGCC	1 cut(s)	801
BtgI	CCRYGG	1 cut(s)	337
BtgZI	GCGATG	1 cut(s)	443
BtrI	CACGTC	1 cut(s)	205
BtsCI	GGATG	4 cut(s)	491, 652, 778, 904
BveI	ACCTGC	1 cut(s)	253
Cac8I	GCNNGC	1 cut(s)	87
CaiI	CAGNNNCTG	1 cut(s)	519
Cfr13I	GGNCC	2 cut(s)	64, 800
CseI	GACGC	2 cut(s)	237, 405
Csp6I	GTAC	1 cut(s)	303
CviAII	CATG	3 cut(s)	60, 338, 786
CviQI	GTAC	1 cut(s)	303
DdeI	CTNAG	5 cut(s)	299, 453, 681, 687, 1074
DpnI	GATC	6 cut(s)	314, 448, 729, 777, 867, 984
DpnII	GATC	6 cut(s)	312, 446, 727, 775, 865, 982
DriI	GACNNNNNGTC	1 cut(s)	401
Eam1104I	CTCTTC	1 cut(s)	999
Eam1105I	GACNNNNNGTC	1 cut(s)	401
EarI	CTCTTC	1 cut(s)	999
EciI	GGCGGA	1 cut(s)	352
Eco130I	CCWWGG	1 cut(s)	337
Eco47I	GGWCC	1 cut(s)	64
Eco57I	CTGAAG	1 cut(s)	509
Eco88I	CYCGRG	2 cut(s)	281, 802
EcoO109I	RGGNCCY	1 cut(s)	64
EcoT14I	CCWWGG	1 cut(s)	337
ErhI	CCWWGG	1 cut(s)	337
Esp3I	CGTCTC	1 cut(s)	255
FaeI	CATG	3 cut(s)	63, 341, 789
FaiI	YATR	8 cut(s)	61, 339, 552, 722, 787, 894, 1001, 1031
FalI	AAGNNNNNCTT	4 cut(s)	9, 41, 915, 947
FaqI	GGGAC	2 cut(s)	32, 302
FatI	CATG	3 cut(s)	59, 337, 785
FauI	CCCGC	1 cut(s)	169
FbaI	TGATCA	1 cut(s)	982
FblI	GTMKAC	1 cut(s)	207
Fnu4HI	GCNGC	1 cut(s)	346
FokI	GGATG	4 cut(s)	498, 639, 765, 911
Fsp4HI	GCNGC	1 cut(s)	346
GluI	GCNGC	1 cut(s)	346
GsuI	CTGGAG	2 cut(s)	585, 597
HaeIII	GGCC	1 cut(s)	801
HapII	CCGG	2 cut(s)	442, 758
HgaI	GACGC	2 cut(s)	237, 405
Hin1I	GRCGYC	1 cut(s)	397
Hin1II	CATG	3 cut(s)	63, 341, 789
HincII	GTYRAC	3 cut(s)	22, 208, 829
HindII	GTYRAC	3 cut(s)	22, 208, 829
HindIII	AAGCTT	1 cut(s)	83
HinfI	GANTC	9 cut(s)	209, 234, 516, 539, 624, 679, 825, 841, 1037
HpaII	CCGG	2 cut(s)	442, 758
HphI	GGTGA	3 cut(s)	220, 397, 776
Hpy166II	GTNNAC	5 cut(s)	22, 208, 668, 829, 1024
Hpy188I	TCNGA	4 cut(s)	264, 528, 608, 688
Hpy188III	TCNNGA	5 cut(s)	513, 576, 731, 875, 920
Hpy8I	GTNNAC	5 cut(s)	22, 208, 668, 829, 1024
Hpy99I	CGWCG	5 cut(s)	108, 185, 209, 399, 482
HpyAV	CCTTC	5 cut(s)	205, 233, 266, 614, 755
HpyCH4III	ACNGT	2 cut(s)	116, 152
HpyCH4IV	ACGT	1 cut(s)	204
HpyCH4V	TGCA	2 cut(s)	36, 1024
HpyF10VI	GCNNNNNNNGC	3 cut(s)	371, 579, 608
HpyF3I	CTNAG	5 cut(s)	299, 453, 681, 687, 1074
HpySE526I	ACGT	1 cut(s)	204
Hsp92I	GRCGYC	1 cut(s)	397
Hsp92II	CATG	3 cut(s)	63, 341, 789
Ksp22I	TGATCA	1 cut(s)	982
Kzo9I	GATC	6 cut(s)	312, 446, 727, 775, 865, 982
Lsp1109I	GCAGC	1 cut(s)	357
LweI	GCATC	1 cut(s)	466
MaeII	ACGT	1 cut(s)	204
MaeIII	GTNAC	4 cut(s)	11, 269, 403, 715
MalI	GATC	6 cut(s)	314, 448, 729, 777, 867, 984
MboI	GATC	6 cut(s)	312, 446, 727, 775, 865, 982
MboII	GAAGA	7 cut(s)	325, 638, 641, 703, 779, 922, 1016
MflI	RGATCY	2 cut(s)	446, 865
MhlI	GDGCHC	1 cut(s)	1026
MluCI	AATT	3 cut(s)	42, 76, 884
MlyI	GAGTC	7 cut(s)	203, 525, 533, 633, 673, 834, 850
MseI	TTAA	3 cut(s)	27, 819, 906
MspCI	CTTAAG	1 cut(s)	905
MspI	CCGG	2 cut(s)	442, 758
Mva1269I	GAATGC	1 cut(s)	38
MvnI	CGCG	1 cut(s)	129
MwoI	GCNNNNNNNGC	3 cut(s)	371, 579, 608
NcoI	CCATGG	1 cut(s)	337
NdeII	GATC	6 cut(s)	312, 446, 727, 775, 865, 982
NlaIII	CATG	3 cut(s)	63, 341, 789
NlaIV	GGNNCC	2 cut(s)	65, 277
NmeAIII	GCCGAG	1 cut(s)	163
NmuCI	GTSAC	3 cut(s)	269, 403, 715
NspI	RCATGY	1 cut(s)	789
PaeR7I	CTCGAG	1 cut(s)	281
PcsI	WCGNNNNNNNCGW	2 cut(s)	204, 279
PctI	GAATGC	1 cut(s)	38
PfeI	GAWTC	2 cut(s)	234, 1037
PflFI	GACNNNGTC	2 cut(s)	203, 682
PflMI	CCANNNNNTGG	2 cut(s)	519, 662
PkrI	GCNGC	1 cut(s)	347
PleI	GAGTC	7 cut(s)	203, 524, 533, 632, 673, 833, 849
PpsI	GAGTC	7 cut(s)	203, 524, 533, 632, 673, 833, 849
PpuMI	RGGWCCY	1 cut(s)	64
Psp5II	RGGWCCY	1 cut(s)	64
PspN4I	GGNNCC	2 cut(s)	65, 277
PspPI	GGNCC	2 cut(s)	64, 800
PspPPI	RGGWCCY	1 cut(s)	64
PspXI	VCTCGAGB	1 cut(s)	281
PstNI	CAGNNNCTG	1 cut(s)	519
PsuI	RGATCY	2 cut(s)	446, 865
PsyI	GACNNNGTC	2 cut(s)	203, 682
RsaI	GTAC	1 cut(s)	304
RsaNI	GTAC	1 cut(s)	303
SalI	GTCGAC	1 cut(s)	206
SaqAI	TTAA	3 cut(s)	27, 819, 906
SatI	GCNGC	1 cut(s)	346
Sau3AI	GATC	6 cut(s)	312, 446, 727, 775, 865, 982
Sau96I	GGNCC	2 cut(s)	64, 800
ScaI	AGTACT	1 cut(s)	304
SchI	GAGTC	7 cut(s)	203, 525, 533, 633, 673, 834, 850
SduI	GDGCHC	1 cut(s)	1026
SfaNI	GCATC	1 cut(s)	466
SfcI	CTRYAG	1 cut(s)	306
Sfr274I	CTCGAG	1 cut(s)	281
SinI	GGWCC	1 cut(s)	64
SlaI	CTCGAG	1 cut(s)	281
SmlI	CTYRAG	2 cut(s)	281, 905
SmoI	CTYRAG	2 cut(s)	281, 905
Sse9I	AATT	3 cut(s)	42, 76, 884
SsiI	CCGC	4 cut(s)	127, 162, 363, 414
StyI	CCWWGG	1 cut(s)	337
TaaI	ACNGT	2 cut(s)	116, 152
TaiI	ACGT	1 cut(s)	207
TaqI	TCGA	5 cut(s)	180, 198, 207, 282, 730
TasI	AATT	3 cut(s)	42, 76, 884
TatI	WGTACW	1 cut(s)	302
TfiI	GAWTC	2 cut(s)	234, 1037
Tru1I	TTAA	3 cut(s)	27, 819, 906
Tru9I	TTAA	3 cut(s)	27, 819, 906
TseFI	GTSAC	3 cut(s)	269, 403, 715
TseI	GCWGC	1 cut(s)	345
Tsp45I	GTSAC	3 cut(s)	269, 403, 715
TspDTI	ATGAA	4 cut(s)	248, 633, 641, 980
TspGWI	ACGGA	2 cut(s)	92, 288
Tth111I	GACNNNGTC	2 cut(s)	203, 682
Van91I	CCANNNNNTGG	2 cut(s)	519, 662
Vha464I	CTTAAG	1 cut(s)	905
VneI	GTGCAC	1 cut(s)	1022
VpaK11BI	GGWCC	1 cut(s)	64
XceI	RCATGY	1 cut(s)	789
XcmI	CCANNNNNNNNNTGG	1 cut(s)	57
XhoI	CTCGAG	1 cut(s)	281
XmiI	GTMKAC	1 cut(s)	207
ZrmI	AGTACT	1 cut(s)	304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.