Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0009030

Physical Location & Seq

Genomic Coordinates Reverse (-)

21538791 .. 21541769

Gene Structure 2979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G249800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1035 bp

ATGGCTGGCAGTAATGAAGTCAACGTCAATGAATCCAAGAGGGTCGTTCCGCTTAATACATGGGTACTCATCTCCAATTTCAAGCTAGCTTACAATCTCCTGCGCCGGGCTGATGGAACATTCAACCGTGAGTTGGCAGAGTTTCTTGACCGCAAAGTCCCTGCCAATACAATTCCAGTTGATGGGGTTTTCTCATTTGATCACGTTGATAGAGGTACCGGACTCCTTAACCGGGTTTACCTACAGGCCCCTGAAAATGAGGCTCAATGGGGGATTGTGGATCTTGAGAAACCCTTGAGCACCACCAAGATTGTCCCAGTCATAATTTTCTTCCATGGTGGTAGCTTCACTCATTCCTCAGCCAACAGTGCCATCTATGATACATTCTGTCGCCGTCTTGTTAATACATGCAAGGCTGTTGTAGTGTCAGTAAATTATCGTCGATCGCCTGAACATCGATATCCTTGTGCATATGATGATGGCTGGGCAACTCTCAAGTGGGTTAAATCAAGAACATGGCTTCGGAGTGGGAAGGACTCAAAGGTTCATGTTTACCTGGCTGGAGACAGTTCAGGTGGCAACATTGCTCACCATGTTGCAGTAAAAGCAGCTGAAGCAGAAGTTGAGGTATTGGGAAACATCCTTCTTCACCCCATGTTTGGTGGGCAAAAGAGAACAGAATCAGAAAAGAGATTGGATGGGAAGTATTTCGTTACAATTCAAGACCGCGATTGGTACTGGCGAGCTTTTCTTCCTGAAGGAGAAGACAGAGACCACCCAGCATGTAATATATTTGGCCCCAGAGATAAAAGCCTTGAAGGGCTCAAATTCCCCAAAAGTCTTGTTGTTGTGGCTGGTTTTGATCTTGTCCAAGATTGGCAATTGGCGTATGTGGAAGGGCTGAAGAATTCAGGTCAGGATGTGAAGCTCCTTTATCTAAAGCAGGCCACAATCGGTTTCTACTTCCTGCCAAACAATGAGCATTTCTATTGTCTCATGGAGGAGATAAGCAACTTCGTCAATCCTGACTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005975 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009311 GO:0009312 GO:0009653 GO:0009719 GO:0009725 GO:0009739 GO:0009755 GO:0009791 GO:0009892 GO:0009908 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010154 GO:0010325 GO:0010331 GO:0010468 GO:0010476 GO:0010605 GO:0010629 GO:0010646 GO:0010647 GO:0016051 GO:0016787 GO:0019222 GO:0019840 GO:0022414 GO:0023051 GO:0023052 GO:0023056 GO:0031406 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036094 GO:0042221 GO:0042562 GO:0043167 GO:0043168 GO:0043177 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044238 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048518 GO:0048519 GO:0048522 GO:0048530 GO:0048583 GO:0048584 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:0080154 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1901576 GO:1901700 GO:1901701 GO:1905392 GO:1905516 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Abhydrolase_3

Protein Analysis

345

Amino Acids

38.98

Weight (kDa)

6.8

Isoelectric Point (pI)

37.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63010
fragaria_vesca	FvH4_2g24370 FvH4_2g24370 FvH4_3g11720
malus_domestica	MD03G1273300.v1.1 MD11G1296000.v1.1
prunus_persica	Prupe.8G249800_v2.0.a1 Prupe.8G249800_v2.0.a1 Prupe.8G249800_v2.0.a1 Prupe.8G249800_v2.0.a1
pyrus_communis	pycom03g21780 pycom11g26050
rosa_chinensis	RchiOBHm_Chr6g0292241
rosa_laevigata	RLG00000012050
rosa_multiflora	Rmu_sc0002993.1_g000009
rosa_roxburghii	Rroxscaffold_7G00175310
rosa_rugosa	Rorug06G0224800
rosa_samantha	Rh6AG337800 Rh6BG345100 Rh6CG352200 Rh6DG338100
rosa_wichuraiana	Rw6G029420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	155
Acc65I	GGTACC	1 cut(s)	215
AccB1I	GGYRCC	1 cut(s)	215
AccB7I	CCANNNNNTGG	1 cut(s)	182
AccII	CGCG	1 cut(s)	729
AciI	CCGC	3 cut(s)	50, 151, 727
AclWI	GGATC	1 cut(s)	288
AcsI	RAATTY	2 cut(s)	827, 907
AcuI	CTGAAG	3 cut(s)	633, 777, 923
AfaI	GTAC	3 cut(s)	66, 217, 737
AfiI	CCNNNNNNNGG	5 cut(s)	106, 133, 182, 232, 659
AgsI	TTSAA	4 cut(s)	82, 124, 722, 818
AjnI	CCWGG	1 cut(s)	555
AluBI	AGCT	6 cut(s)	85, 89, 345, 611, 746, 928
AluI	AGCT	6 cut(s)	85, 89, 345, 611, 746, 928
Alw21I	GWGCWC	1 cut(s)	302
Alw26I	GTCTC	3 cut(s)	558, 765, 998
AlwI	GGATC	1 cut(s)	288
AoxI	GGCC	3 cut(s)	246, 796, 945
ApeKI	GCWGC	1 cut(s)	608
ApoI	RAATTY	2 cut(s)	827, 907
Asp700I	GAANNNNTTC	1 cut(s)	707
Asp718I	GGTACC	1 cut(s)	215
AspLEI	GCGC	1 cut(s)	105
AspS9I	GGNCC	2 cut(s)	247, 797
AsuC2I	CCSGG	2 cut(s)	107, 233
AsuHPI	GGTGA	2 cut(s)	581, 641
AsuNHI	GCTAGC	1 cut(s)	85
BanI	GGYRCC	1 cut(s)	215
BanII	GRGCYC	1 cut(s)	825
BbsI	GAAGAC	1 cut(s)	771
Bbv12I	GWGCWC	1 cut(s)	302
BbvCI	CCTCAGC	1 cut(s)	358
BbvI	GCAGC	1 cut(s)	620
BccI	CCATC	5 cut(s)	107, 176, 380, 473, 692
BceAI	ACGGC	1 cut(s)	378
BciT130I	CCWGG	1 cut(s)	557
BclI	TGATCA	1 cut(s)	199
BcnI	CCSGG	2 cut(s)	107, 233
BcoDI	GTCTC	3 cut(s)	558, 765, 998
BfaI	CTAG	1 cut(s)	86
BfmI	CTRYAG	1 cut(s)	242
BisI	GCNGC	1 cut(s)	609
BlsI	GCNGC	1 cut(s)	610
Bme1390I	CCNGG	3 cut(s)	107, 233, 557
BmgT120I	GGNCC	2 cut(s)	247, 797
BmiI	GGNNCC	3 cut(s)	217, 249, 799
BmrFI	CCNGG	3 cut(s)	107, 233, 557
BmrI	ACTGGG	1 cut(s)	311
BmtI	GCTAGC	1 cut(s)	89
BmuI	ACTGGG	1 cut(s)	311
BpiI	GAAGAC	1 cut(s)	771
BpmI	CTGGAG	1 cut(s)	582
Bpu10I	CCTNAGC	1 cut(s)	358
BpuEI	CTTGAG	3 cut(s)	305, 316, 479
BpuMI	CCSGG	2 cut(s)	107, 233
Bsa29I	ATCGAT	1 cut(s)	457
BsaI	GGTCTC	1 cut(s)	765
BsaJI	CCNNGG	1 cut(s)	334
BsaWI	WCCGGW	1 cut(s)	218
Bsc4I	CCNNNNNNNGG	5 cut(s)	106, 133, 182, 232, 659
Bse1I	ACTGG	3 cut(s)	176, 317, 743
Bse3DI	GCAATG	1 cut(s)	582
BseBI	CCWGG	1 cut(s)	557
BseCI	ATCGAT	1 cut(s)	457
BseDI	CCNNGG	1 cut(s)	334
BseGI	GGATG	3 cut(s)	639, 703, 925
BseLI	CCNNNNNNNGG	5 cut(s)	106, 133, 182, 232, 659
BseMI	GCAATG	1 cut(s)	582
BseMII	CTCAG	1 cut(s)	372
BseNI	ACTGG	3 cut(s)	176, 317, 743
BseRI	GAGGAG	1 cut(s)	1016
BseXI	GCAGC	1 cut(s)	620
BseYI	CCCAGC	2 cut(s)	483, 778
Bsh1236I	CGCG	1 cut(s)	729
Bsh1285I	CGRYCG	1 cut(s)	446
BshFI	GGCC	3 cut(s)	248, 798, 947
BshNI	GGYRCC	1 cut(s)	215
BshVI	ATCGAT	1 cut(s)	457
BsiEI	CGRYCG	1 cut(s)	446
BsiHKAI	GWGCWC	1 cut(s)	302
BsiSI	CCGG	3 cut(s)	106, 219, 232
BslFI	GGGAC	2 cut(s)	143, 299
BslI	CCNNNNNNNGG	5 cut(s)	106, 133, 182, 232, 659
BsmAI	GTCTC	3 cut(s)	558, 765, 998
BsmFI	GGGAC	2 cut(s)	143, 299
BsnI	GGCC	3 cut(s)	248, 798, 947
Bso31I	GGTCTC	1 cut(s)	765
Bsp1286I	GDGCHC	2 cut(s)	302, 825
Bsp143I	GATC	4 cut(s)	199, 280, 443, 862
Bsp19I	CCATGG	1 cut(s)	334
BspACI	CCGC	3 cut(s)	50, 151, 727
BspANI	GGCC	3 cut(s)	248, 798, 947
BspCNI	CTCAG	1 cut(s)	371
BspDI	ATCGAT	1 cut(s)	457
BspFNI	CGCG	1 cut(s)	729
BspLI	GGNNCC	3 cut(s)	217, 249, 799
BspOI	GCTAGC	1 cut(s)	89
BspPI	GGATC	1 cut(s)	288
BspT107I	GGYRCC	1 cut(s)	215
BspTNI	GGTCTC	1 cut(s)	765
BsrDI	GCAATG	1 cut(s)	582
BsrI	ACTGG	3 cut(s)	176, 317, 743
BssECI	CCNNGG	1 cut(s)	334
BssMI	GATC	4 cut(s)	199, 280, 443, 862
BssT1I	CCWWGG	1 cut(s)	334
Bst2UI	CCWGG	1 cut(s)	557
Bst4CI	ACNGT	4 cut(s)	128, 368, 569, 1031
BstC8I	GCNNGC	4 cut(s)	7, 87, 744, 945
BstDEI	CTNAG	1 cut(s)	358
BstDSI	CCRYGG	1 cut(s)	334
BstF5I	GGATG	3 cut(s)	639, 703, 925
BstFNI	CGCG	1 cut(s)	729
BstHHI	GCGC	1 cut(s)	105
BstKTI	GATC	4 cut(s)	202, 283, 446, 865
BstMAI	GTCTC	3 cut(s)	558, 765, 998
BstMBI	GATC	4 cut(s)	199, 280, 443, 862
BstMCI	CGRYCG	1 cut(s)	446
BstMWI	GCNNNNNNNGC	3 cut(s)	368, 605, 614
BstNI	CCWGG	1 cut(s)	557
BstNSI	RCATGY	2 cut(s)	411, 786
BstSCI	CCNGG	3 cut(s)	105, 231, 555
BstSFI	CTRYAG	1 cut(s)	242
BstUI	CGCG	1 cut(s)	729
BstV1I	GCAGC	1 cut(s)	620
BstV2I	GAAGAC	1 cut(s)	771
BstX2I	RGATCY	1 cut(s)	280
BstYI	RGATCY	1 cut(s)	280
Bsu15I	ATCGAT	1 cut(s)	457
BsuRI	GGCC	3 cut(s)	248, 798, 947
BsuTUI	ATCGAT	1 cut(s)	457
BtgI	CCRYGG	1 cut(s)	334
BtsCI	GGATG	3 cut(s)	639, 703, 925
BtsIMutI	CAGTG	1 cut(s)	373
Cac8I	GCNNGC	4 cut(s)	7, 87, 744, 945
CfoI	GCGC	1 cut(s)	105
Cfr13I	GGNCC	2 cut(s)	247, 797
ClaI	ATCGAT	1 cut(s)	457
Csp6I	GTAC	3 cut(s)	65, 216, 736
CspCI	CAANNNNNGTGG	2 cut(s)	292, 327
CviAII	CATG	9 cut(s)	60, 335, 408, 516, 548, 593, 655, 783, 997
CviQI	GTAC	3 cut(s)	65, 216, 736
DdeI	CTNAG	1 cut(s)	358
DpnI	GATC	4 cut(s)	201, 282, 445, 864
DpnII	GATC	4 cut(s)	199, 280, 443, 862
DrdI	GACNNNNNNGTC	1 cut(s)	155
DseDI	GACNNNNNNGTC	1 cut(s)	155
Eco130I	CCWWGG	1 cut(s)	334
Eco24I	GRGCYC	1 cut(s)	825
Eco31I	GGTCTC	1 cut(s)	765
Eco32I	GATATC	1 cut(s)	461
Eco57I	CTGAAG	3 cut(s)	633, 777, 923
EcoO109I	RGGNCCY	1 cut(s)	247
EcoRI	GAATTC	1 cut(s)	907
EcoRII	CCWGG	1 cut(s)	555
EcoRV	GATATC	1 cut(s)	461
EcoT14I	CCWWGG	1 cut(s)	334
EcoT38I	GRGCYC	1 cut(s)	825
ErhI	CCWWGG	1 cut(s)	334
FaeI	CATG	9 cut(s)	63, 338, 411, 519, 551, 596, 658, 786, 1000
FaqI	GGGAC	2 cut(s)	143, 299
FatI	CATG	9 cut(s)	59, 334, 407, 515, 547, 592, 654, 782, 996
FauNDI	CATATG	1 cut(s)	472
FbaI	TGATCA	1 cut(s)	199
Fnu4HI	GCNGC	1 cut(s)	609
FokI	GGATG	3 cut(s)	626, 710, 932
FriOI	GRGCYC	1 cut(s)	825
Fsp4HI	GCNGC	1 cut(s)	609
FspBI	CTAG	1 cut(s)	86
GlaI	GCGC	1 cut(s)	104
GluI	GCNGC	1 cut(s)	609
GsaI	CCCAGC	2 cut(s)	487, 782
GsuI	CTGGAG	1 cut(s)	582
HaeIII	GGCC	3 cut(s)	248, 798, 947
HapII	CCGG	3 cut(s)	106, 219, 232
HhaI	GCGC	1 cut(s)	105
Hin1II	CATG	9 cut(s)	63, 338, 411, 519, 551, 596, 658, 786, 1000
Hin6I	GCGC	1 cut(s)	103
HinP1I	GCGC	1 cut(s)	103
HincII	GTYRAC	1 cut(s)	22
HindII	GTYRAC	1 cut(s)	22
HinfI	GANTC	4 cut(s)	32, 222, 536, 680
HpaII	CCGG	3 cut(s)	106, 219, 232
HphI	GGTGA	2 cut(s)	581, 641
Hpy166II	GTNNAC	3 cut(s)	22, 238, 553
Hpy188I	TCNGA	2 cut(s)	525, 685
Hpy188III	TCNNGA	7 cut(s)	146, 284, 510, 722, 755, 917, 1025
Hpy8I	GTNNAC	3 cut(s)	22, 238, 553
Hpy99I	CGWCG	1 cut(s)	444
HpyAV	CCTTC	5 cut(s)	526, 653, 752, 812, 890
HpyCH4III	ACNGT	4 cut(s)	128, 368, 569, 1031
HpyCH4IV	ACGT	2 cut(s)	24, 204
HpyCH4V	TGCA	3 cut(s)	411, 470, 599
HpyF10VI	GCNNNNNNNGC	3 cut(s)	368, 605, 614
HpyF3I	CTNAG	1 cut(s)	358
HpySE526I	ACGT	2 cut(s)	24, 204
Hsp92II	CATG	9 cut(s)	63, 338, 411, 519, 551, 596, 658, 786, 1000
HspAI	GCGC	1 cut(s)	103
KpnI	GGTACC	1 cut(s)	219
Ksp22I	TGATCA	1 cut(s)	199
Kzo9I	GATC	4 cut(s)	199, 280, 443, 862
LmnI	GCTCC	1 cut(s)	933
Lsp1109I	GCAGC	1 cut(s)	620
MaeI	CTAG	1 cut(s)	86
MaeII	ACGT	2 cut(s)	24, 204
MaeIII	GTNAC	1 cut(s)	712
MalI	GATC	4 cut(s)	201, 282, 445, 864
MboI	GATC	4 cut(s)	199, 280, 443, 862
MboII	GAAGA	5 cut(s)	322, 638, 743, 776, 916
MfeI	CAATTG	1 cut(s)	881
MflI	RGATCY	1 cut(s)	280
MhlI	GDGCHC	2 cut(s)	302, 825
MluCI	AATT	8 cut(s)	76, 171, 324, 433, 717, 827, 881, 907
MlyI	GAGTC	2 cut(s)	216, 530
MnlI	CCTC	6 cut(s)	33, 206, 253, 367, 619, 994
MroXI	GAANNNNTTC	1 cut(s)	707
MseI	TTAA	5 cut(s)	54, 228, 402, 504, 1033
MspA1I	CMGCKG	1 cut(s)	611
MspI	CCGG	3 cut(s)	106, 219, 232
MspR9I	CCNGG	3 cut(s)	107, 233, 557
MunI	CAATTG	1 cut(s)	881
MvaI	CCWGG	1 cut(s)	557
MvnI	CGCG	1 cut(s)	729
MwoI	GCNNNNNNNGC	3 cut(s)	368, 605, 614
NciI	CCSGG	2 cut(s)	107, 233
NcoI	CCATGG	1 cut(s)	334
NdeI	CATATG	1 cut(s)	472
NdeII	GATC	4 cut(s)	199, 280, 443, 862
NheI	GCTAGC	1 cut(s)	85
NlaIII	CATG	9 cut(s)	63, 338, 411, 519, 551, 596, 658, 786, 1000
NlaIV	GGNNCC	3 cut(s)	217, 249, 799
NspI	RCATGY	2 cut(s)	411, 786
PdmI	GAANNNNTTC	1 cut(s)	707
PfeI	GAWTC	2 cut(s)	32, 680
PflMI	CCANNNNNTGG	1 cut(s)	182
PkrI	GCNGC	1 cut(s)	610
Ple19I	CGATCG	1 cut(s)	446
PleI	GAGTC	2 cut(s)	216, 530
PpsI	GAGTC	2 cut(s)	216, 530
Psp6I	CCWGG	1 cut(s)	555
PspFI	CCCAGC	2 cut(s)	483, 778
PspGI	CCWGG	1 cut(s)	555
PspN4I	GGNNCC	3 cut(s)	217, 249, 799
PspPI	GGNCC	2 cut(s)	247, 797
PsuI	RGATCY	1 cut(s)	280
PvuI	CGATCG	1 cut(s)	446
PvuII	CAGCTG	1 cut(s)	611
RsaI	GTAC	3 cut(s)	66, 217, 737
RsaNI	GTAC	3 cut(s)	65, 216, 736
SaqAI	TTAA	5 cut(s)	54, 228, 402, 504, 1033
SatI	GCNGC	1 cut(s)	609
Sau3AI	GATC	4 cut(s)	199, 280, 443, 862
Sau96I	GGNCC	2 cut(s)	247, 797
SchI	GAGTC	2 cut(s)	216, 530
ScrFI	CCNGG	3 cut(s)	107, 233, 557
SduI	GDGCHC	2 cut(s)	302, 825
SfcI	CTRYAG	1 cut(s)	242
SmlI	CTYRAG	3 cut(s)	284, 295, 494
SmoI	CTYRAG	3 cut(s)	284, 295, 494
Sse9I	AATT	8 cut(s)	76, 171, 324, 433, 717, 827, 881, 907
SsiI	CCGC	3 cut(s)	50, 151, 727
SspMI	CTAG	1 cut(s)	86
StyD4I	CCNGG	3 cut(s)	105, 231, 555
StyI	CCWWGG	1 cut(s)	334
TaaI	ACNGT	4 cut(s)	128, 368, 569, 1031
TaiI	ACGT	2 cut(s)	27, 207
TaqI	TCGA	2 cut(s)	442, 457
TasI	AATT	8 cut(s)	76, 171, 324, 433, 717, 827, 881, 907
TfiI	GAWTC	2 cut(s)	32, 680
Tru1I	TTAA	5 cut(s)	54, 228, 402, 504, 1033
Tru9I	TTAA	5 cut(s)	54, 228, 402, 504, 1033
TscAI	CASTG	1 cut(s)	373
TseI	GCWGC	1 cut(s)	608
TspDTI	ATGAA	3 cut(s)	30, 45, 536
TspRI	CASTG	1 cut(s)	373
Van91I	CCANNNNNTGG	1 cut(s)	182
XapI	RAATTY	2 cut(s)	827, 907
XceI	RCATGY	2 cut(s)	411, 786
XmnI	GAANNNNTTC	1 cut(s)	707
XspI	CTAG	1 cut(s)	86

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.