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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G03290 AT1G03290 AT1G03290 AT1G03290 AT1G03290 AT1G03290 AT4G02880 AT4G02880 |
| fragaria_vesca | FvH4_2g23870 FvH4_2g23870 FvH4_2g23870 FvH4_2g23870 |
| malus_domestica | MD03G1268400.v1.1 MD11G1289200.v1.1 |
| prunus_persica | Prupe.8G244100_v2.0.a1 Prupe.8G244100_v2.0.a1 |
| pyrus_communis | pycom03g21430 pycom11g25660 |
| rosa_chinensis | RchiOBHm_Chr6g0291481 |
| rosa_laevigata | RLG00000012112 |
| rosa_multiflora | Rmu_sc0003296.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00176020 |
| rosa_rugosa | Rorug06G0219800 Rorug06G0219900 |
| rosa_samantha | Rh6AG332000 Rh6BG338900 Rh6CG345100 Rh6DG332300 |
| rosa_wichuraiana | Rw6G028840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 408 |
| AciI | CCGC | 2 cut(s) | 408, 1497 |
| AclWI | GGATC | 4 cut(s) | 280, 418, 752, 1359 |
| AcoI | YGGCCR | 1 cut(s) | 741 |
| AcsI | RAATTY | 1 cut(s) | 1427 |
| AcuI | CTGAAG | 3 cut(s) | 1016, 1098, 1578 |
| AfaI | GTAC | 1 cut(s) | 511 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 154 |
| AflIII | ACRYGT | 1 cut(s) | 352 |
| AjnI | CCWGG | 1 cut(s) | 804 |
| Alw21I | GWGCWC | 2 cut(s) | 87, 1656 |
| Alw26I | GTCTC | 4 cut(s) | 454, 647, 1119, 1640 |
| AlwI | GGATC | 4 cut(s) | 280, 418, 752, 1359 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 275, 320 |
| Ama87I | CYCGRG | 1 cut(s) | 1564 |
| AoxI | GGCC | 2 cut(s) | 309, 741 |
| ApaI | GGGCCC | 1 cut(s) | 313 |
| ApeKI | GCWGC | 5 cut(s) | 107, 110, 1037, 1205, 1333 |
| ApoI | RAATTY | 1 cut(s) | 1427 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 39 |
| AspLEI | GCGC | 1 cut(s) | 542 |
| AspS9I | GGNCC | 3 cut(s) | 309, 310, 820 |
| AsuC2I | CCSGG | 1 cut(s) | 192 |
| AsuHPI | GGTGA | 1 cut(s) | 767 |
| AsuNHI | GCTAGC | 1 cut(s) | 530 |
| AvaI | CYCGRG | 1 cut(s) | 1564 |
| AvaII | GGWCC | 1 cut(s) | 820 |
| BaeGI | GKGCMC | 1 cut(s) | 313 |
| BanII | GRGCYC | 4 cut(s) | 313, 737, 1583, 1656 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1474, 1506 |
| Bbv12I | GWGCWC | 2 cut(s) | 87, 1656 |
| BbvI | GCAGC | 5 cut(s) | 94, 122, 1024, 1192, 1320 |
| BccI | CCATC | 3 cut(s) | 247, 764, 874 |
| BceAI | ACGGC | 1 cut(s) | 1639 |
| BciT130I | CCWGG | 1 cut(s) | 806 |
| BclI | TGATCA | 1 cut(s) | 1104 |
| BcnI | CCSGG | 1 cut(s) | 192 |
| BcoDI | GTCTC | 4 cut(s) | 454, 647, 1119, 1640 |
| BfaI | CTAG | 4 cut(s) | 531, 954, 1178, 1476 |
| BfmI | CTRYAG | 4 cut(s) | 108, 114, 579, 1304 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 284 |
| BglII | AGATCT | 1 cut(s) | 1162 |
| BisI | GCNGC | 5 cut(s) | 108, 111, 1038, 1206, 1334 |
| BlpI | GCTNAGC | 1 cut(s) | 1209 |
| BlsI | GCNGC | 5 cut(s) | 109, 112, 1039, 1207, 1335 |
| Bme1390I | CCNGG | 2 cut(s) | 192, 806 |
| Bme18I | GGWCC | 1 cut(s) | 820 |
| BmeT110I | CYCGRG | 1 cut(s) | 1564 |
| BmgT120I | GGNCC | 3 cut(s) | 309, 310, 820 |
| BmiI | GGNNCC | 3 cut(s) | 311, 312, 466 |
| BmrFI | CCNGG | 2 cut(s) | 192, 806 |
| BmrI | ACTGGG | 1 cut(s) | 308 |
| BmsI | GCATC | 9 cut(s) | 43, 544, 679, 800, 835, 940, 993, 1143, 1550 |
| BmtI | GCTAGC | 1 cut(s) | 534 |
| BmuI | ACTGGG | 1 cut(s) | 308 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1310, 1342 |
| BpmI | CTGGAG | 2 cut(s) | 444, 1062 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1209 |
| BpuEI | CTTGAG | 1 cut(s) | 1450 |
| BpuMI | CCSGG | 1 cut(s) | 192 |
| Bsa29I | ATCGAT | 1 cut(s) | 639 |
| BsaJI | CCNNGG | 2 cut(s) | 804, 805 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 154 |
| Bse1I | ACTGG | 3 cut(s) | 314, 481, 1491 |
| BseBI | CCWGG | 1 cut(s) | 806 |
| BseCI | ATCGAT | 1 cut(s) | 639 |
| BseDI | CCNNGG | 2 cut(s) | 804, 805 |
| BseGI | GGATG | 9 cut(s) | 100, 421, 610, 724, 775, 815, 1407, 1502, 1624 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BseMII | CTCAG | 3 cut(s) | 168, 450, 1200 |
| BseNI | ACTGG | 3 cut(s) | 314, 481, 1491 |
| BseRI | GAGGAG | 2 cut(s) | 1004, 1453 |
| BseSI | GKGCMC | 1 cut(s) | 313 |
| BseXI | GCAGC | 5 cut(s) | 94, 122, 1024, 1192, 1320 |
| BseYI | CCCAGC | 1 cut(s) | 1626 |
| BsgI | GTGCAG | 1 cut(s) | 1224 |
| BshFI | GGCC | 2 cut(s) | 311, 743 |
| BshVI | ATCGAT | 1 cut(s) | 639 |
| BsiHKAI | GWGCWC | 2 cut(s) | 87, 1656 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1564 |
| BsiSI | CCGG | 1 cut(s) | 192 |
| BslFI | GGGAC | 1 cut(s) | 1643 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BsmAI | GTCTC | 4 cut(s) | 454, 647, 1119, 1640 |
| BsmFI | GGGAC | 1 cut(s) | 1643 |
| BsnI | GGCC | 2 cut(s) | 311, 743 |
| BsoBI | CYCGRG | 1 cut(s) | 1564 |
| Bsp120I | GGGCCC | 1 cut(s) | 309 |
| Bsp1286I | GDGCHC | 5 cut(s) | 87, 313, 737, 1583, 1656 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1209 |
| BspACI | CCGC | 2 cut(s) | 408, 1497 |
| BspANI | GGCC | 2 cut(s) | 311, 743 |
| BspCNI | CTCAG | 3 cut(s) | 169, 449, 1201 |
| BspDI | ATCGAT | 1 cut(s) | 639 |
| BspHI | TCATGA | 1 cut(s) | 298 |
| BspLI | GGNNCC | 3 cut(s) | 311, 312, 466 |
| BspMAI | CTGCAG | 2 cut(s) | 112, 583 |
| BspOI | GCTAGC | 1 cut(s) | 534 |
| BspPI | GGATC | 4 cut(s) | 280, 418, 752, 1359 |
| BspQI | GCTCTTC | 1 cut(s) | 1505 |
| BsrBI | CCGCTC | 1 cut(s) | 408 |
| BsrI | ACTGG | 3 cut(s) | 314, 481, 1491 |
| BssECI | CCNNGG | 2 cut(s) | 804, 805 |
| Bst2UI | CCWGG | 1 cut(s) | 806 |
| Bst4CI | ACNGT | 2 cut(s) | 509, 877 |
| Bst6I | CTCTTC | 2 cut(s) | 621, 1505 |
| BstC8I | GCNNGC | 2 cut(s) | 532, 1243 |
| BstDEI | CTNAG | 4 cut(s) | 177, 333, 436, 1209 |
| BstF5I | GGATG | 9 cut(s) | 100, 421, 610, 724, 775, 815, 1407, 1502, 1624 |
| BstHHI | GCGC | 1 cut(s) | 542 |
| BstMAI | GTCTC | 4 cut(s) | 454, 647, 1119, 1640 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 284, 938, 1022, 1107, 1247, 1306, 1476, 1496 |
| BstNI | CCWGG | 1 cut(s) | 806 |
| BstNSI | RCATGY | 2 cut(s) | 356, 1016 |
| BstSCI | CCNGG | 2 cut(s) | 190, 804 |
| BstSFI | CTRYAG | 4 cut(s) | 108, 114, 579, 1304 |
| BstSLI | GKGCMC | 1 cut(s) | 313 |
| BstV1I | GCAGC | 5 cut(s) | 94, 122, 1024, 1192, 1320 |
| BstX2I | RGATCY | 2 cut(s) | 272, 1162 |
| BstYI | RGATCY | 2 cut(s) | 272, 1162 |
| Bsu15I | ATCGAT | 1 cut(s) | 639 |
| BsuRI | GGCC | 2 cut(s) | 311, 743 |
| BsuTUI | ATCGAT | 1 cut(s) | 639 |
| BtgZI | GCGATG | 1 cut(s) | 495 |
| BtsCI | GGATG | 9 cut(s) | 100, 421, 610, 724, 775, 815, 1407, 1502, 1624 |
| BtsIMutI | CAGTG | 3 cut(s) | 238, 873, 1074 |
| Cac8I | GCNNGC | 2 cut(s) | 532, 1243 |
| CaiI | CAGNNNCTG | 2 cut(s) | 275, 320 |
| CciI | TCATGA | 1 cut(s) | 298 |
| CfoI | GCGC | 1 cut(s) | 542 |
| Cfr13I | GGNCC | 3 cut(s) | 309, 310, 820 |
| ClaI | ATCGAT | 1 cut(s) | 639 |
| Csp6I | GTAC | 1 cut(s) | 510 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 696, 731 |
| CviAII | CATG | 8 cut(s) | 299, 353, 817, 1013, 1033, 1273, 1355, 1507 |
| CviQI | GTAC | 1 cut(s) | 510 |
| DdeI | CTNAG | 4 cut(s) | 177, 333, 436, 1209 |
| DraI | TTTAAA | 1 cut(s) | 66 |
| EaeI | YGGCCR | 1 cut(s) | 741 |
| Eam1104I | CTCTTC | 2 cut(s) | 621, 1505 |
| EarI | CTCTTC | 2 cut(s) | 621, 1505 |
| EciI | GGCGGA | 1 cut(s) | 1486 |
| Ecl136II | GAGCTC | 1 cut(s) | 1654 |
| Eco24I | GRGCYC | 4 cut(s) | 313, 737, 1583, 1656 |
| Eco32I | GATATC | 1 cut(s) | 726 |
| Eco47I | GGWCC | 1 cut(s) | 820 |
| Eco53kI | GAGCTC | 1 cut(s) | 1654 |
| Eco57I | CTGAAG | 3 cut(s) | 1016, 1098, 1578 |
| Eco88I | CYCGRG | 1 cut(s) | 1564 |
| EcoICRI | GAGCTC | 1 cut(s) | 1654 |
| EcoO109I | RGGNCCY | 2 cut(s) | 309, 310 |
| EcoRII | CCWGG | 1 cut(s) | 804 |
| EcoRV | GATATC | 1 cut(s) | 726 |
| EcoT38I | GRGCYC | 4 cut(s) | 313, 737, 1583, 1656 |
| FaeI | CATG | 8 cut(s) | 302, 356, 820, 1016, 1036, 1276, 1358, 1510 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 851, 883, 900, 932 |
| FaqI | GGGAC | 1 cut(s) | 1643 |
| FatI | CATG | 8 cut(s) | 298, 352, 816, 1012, 1032, 1272, 1354, 1506 |
| FbaI | TGATCA | 1 cut(s) | 1104 |
| Fnu4HI | GCNGC | 5 cut(s) | 108, 111, 1038, 1206, 1334 |
| FokI | GGATG | 9 cut(s) | 107, 428, 597, 731, 782, 822, 1394, 1489, 1631 |
| FriOI | GRGCYC | 4 cut(s) | 313, 737, 1583, 1656 |
| Fsp4HI | GCNGC | 5 cut(s) | 108, 111, 1038, 1206, 1334 |
| FspBI | CTAG | 4 cut(s) | 531, 954, 1178, 1476 |
| GlaI | GCGC | 1 cut(s) | 541 |
| GluI | GCNGC | 5 cut(s) | 108, 111, 1038, 1206, 1334 |
| GsaI | CCCAGC | 1 cut(s) | 1630 |
| GsuI | CTGGAG | 2 cut(s) | 444, 1062 |
| HaeIII | GGCC | 2 cut(s) | 311, 743 |
| HapII | CCGG | 1 cut(s) | 192 |
| HhaI | GCGC | 1 cut(s) | 542 |
| Hin1II | CATG | 8 cut(s) | 302, 356, 820, 1016, 1036, 1276, 1358, 1510 |
| Hin6I | GCGC | 1 cut(s) | 540 |
| HinP1I | GCGC | 1 cut(s) | 540 |
| HincII | GTYRAC | 1 cut(s) | 348 |
| HindII | GTYRAC | 1 cut(s) | 348 |
| HindIII | AAGCTT | 2 cut(s) | 1298, 1587 |
| HinfI | GANTC | 8 cut(s) | 323, 340, 419, 545, 884, 895, 1292, 1370 |
| HpaII | CCGG | 1 cut(s) | 192 |
| HphI | GGTGA | 1 cut(s) | 767 |
| Hpy166II | GTNNAC | 6 cut(s) | 19, 348, 649, 823, 873, 1484 |
| Hpy188I | TCNGA | 9 cut(s) | 127, 250, 384, 415, 439, 550, 900, 1117, 1412 |
| Hpy8I | GTNNAC | 6 cut(s) | 19, 348, 649, 823, 873, 1484 |
| HpyAV | CCTTC | 3 cut(s) | 919, 1012, 1226 |
| HpyCH4III | ACNGT | 2 cut(s) | 509, 877 |
| HpyCH4IV | ACGT | 2 cut(s) | 217, 1603 |
| HpyCH4V | TGCA | 6 cut(s) | 56, 110, 562, 581, 813, 1241 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 284, 938, 1022, 1107, 1247, 1306, 1476, 1496 |
| HpyF3I | CTNAG | 4 cut(s) | 177, 333, 436, 1209 |
| HpySE526I | ACGT | 2 cut(s) | 217, 1603 |
| Hsp92II | CATG | 8 cut(s) | 302, 356, 820, 1016, 1036, 1276, 1358, 1510 |
| HspAI | GCGC | 1 cut(s) | 540 |
| Ksp22I | TGATCA | 1 cut(s) | 1104 |
| LguI | GCTCTTC | 1 cut(s) | 1505 |
| LmnI | GCTCC | 3 cut(s) | 464, 991, 1609 |
| Lsp1109I | GCAGC | 5 cut(s) | 94, 122, 1024, 1192, 1320 |
| LweI | GCATC | 9 cut(s) | 43, 544, 679, 800, 835, 940, 993, 1143, 1550 |
| MaeI | CTAG | 4 cut(s) | 531, 954, 1178, 1476 |
| MaeII | ACGT | 2 cut(s) | 217, 1603 |
| MaeIII | GTNAC | 4 cut(s) | 5, 316, 791, 854 |
| MbiI | CCGCTC | 1 cut(s) | 408 |
| MboII | GAAGA | 9 cut(s) | 563, 608, 854, 959, 1009, 1012, 1130, 1485, 1522 |
| MflI | RGATCY | 2 cut(s) | 272, 1162 |
| MhlI | GDGCHC | 5 cut(s) | 87, 313, 737, 1583, 1656 |
| MluCI | AATT | 8 cut(s) | 35, 151, 586, 594, 621, 1065, 1362, 1427 |
| MlyI | GAGTC | 2 cut(s) | 428, 893 |
| MmeI | TCCRAC | 1 cut(s) | 1435 |
| MroXI | GAANNNNTTC | 1 cut(s) | 39 |
| MseI | TTAA | 4 cut(s) | 65, 99, 1083, 1596 |
| MslI | CAYNNNNRTG | 1 cut(s) | 878 |
| MspA1I | CMGCKG | 1 cut(s) | 113 |
| MspI | CCGG | 1 cut(s) | 192 |
| MspR9I | CCNGG | 2 cut(s) | 192, 806 |
| MvaI | CCWGG | 1 cut(s) | 806 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 284, 938, 1022, 1107, 1247, 1306, 1476, 1496 |
| NciI | CCSGG | 1 cut(s) | 192 |
| NheI | GCTAGC | 1 cut(s) | 530 |
| NlaIII | CATG | 8 cut(s) | 302, 356, 820, 1016, 1036, 1276, 1358, 1510 |
| NlaIV | GGNNCC | 3 cut(s) | 311, 312, 466 |
| NmeAIII | GCCGAG | 1 cut(s) | 718 |
| NspI | RCATGY | 2 cut(s) | 356, 1016 |
| PaeR7I | CTCGAG | 1 cut(s) | 1564 |
| PagI | TCATGA | 1 cut(s) | 298 |
| PasI | CCCWGGG | 1 cut(s) | 805 |
| PciI | ACATGT | 1 cut(s) | 352 |
| PciSI | GCTCTTC | 1 cut(s) | 1505 |
| PdmI | GAANNNNTTC | 1 cut(s) | 39 |
| PfeI | GAWTC | 6 cut(s) | 323, 340, 545, 895, 1292, 1370 |
| PkrI | GCNGC | 5 cut(s) | 109, 112, 1039, 1207, 1335 |
| PleI | GAGTC | 2 cut(s) | 427, 892 |
| PpsI | GAGTC | 2 cut(s) | 427, 892 |
| PscI | ACATGT | 1 cut(s) | 352 |
| Psp124BI | GAGCTC | 1 cut(s) | 1656 |
| Psp6I | CCWGG | 1 cut(s) | 804 |
| PspFI | CCCAGC | 1 cut(s) | 1626 |
| PspGI | CCWGG | 1 cut(s) | 804 |
| PspN4I | GGNNCC | 3 cut(s) | 311, 312, 466 |
| PspOMI | GGGCCC | 1 cut(s) | 309 |
| PspPI | GGNCC | 3 cut(s) | 309, 310, 820 |
| PspXI | VCTCGAGB | 1 cut(s) | 1564 |
| PstI | CTGCAG | 2 cut(s) | 112, 583 |
| PstNI | CAGNNNCTG | 2 cut(s) | 275, 320 |
| PsuI | RGATCY | 2 cut(s) | 272, 1162 |
| PvuII | CAGCTG | 1 cut(s) | 113 |
| RsaI | GTAC | 1 cut(s) | 511 |
| RsaNI | GTAC | 1 cut(s) | 510 |
| RseI | CAYNNNNRTG | 1 cut(s) | 878 |
| SacI | GAGCTC | 1 cut(s) | 1656 |
| SapI | GCTCTTC | 1 cut(s) | 1505 |
| SaqAI | TTAA | 4 cut(s) | 65, 99, 1083, 1596 |
| SatI | GCNGC | 5 cut(s) | 108, 111, 1038, 1206, 1334 |
| Sau96I | GGNCC | 3 cut(s) | 309, 310, 820 |
| SchI | GAGTC | 2 cut(s) | 428, 893 |
| ScrFI | CCNGG | 2 cut(s) | 192, 806 |
| SduI | GDGCHC | 5 cut(s) | 87, 313, 737, 1583, 1656 |
| SfaNI | GCATC | 9 cut(s) | 43, 544, 679, 800, 835, 940, 993, 1143, 1550 |
| SfcI | CTRYAG | 4 cut(s) | 108, 114, 579, 1304 |
| Sfr274I | CTCGAG | 1 cut(s) | 1564 |
| SinI | GGWCC | 1 cut(s) | 820 |
| SlaI | CTCGAG | 1 cut(s) | 1564 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 878 |
| SmlI | CTYRAG | 2 cut(s) | 1465, 1564 |
| SmoI | CTYRAG | 2 cut(s) | 1465, 1564 |
| Sse9I | AATT | 8 cut(s) | 35, 151, 586, 594, 621, 1065, 1362, 1427 |
| SsiI | CCGC | 2 cut(s) | 408, 1497 |
| SspMI | CTAG | 4 cut(s) | 531, 954, 1178, 1476 |
| SstI | GAGCTC | 1 cut(s) | 1656 |
| StyD4I | CCNGG | 2 cut(s) | 190, 804 |
| TaaI | ACNGT | 2 cut(s) | 509, 877 |
| TaiI | ACGT | 2 cut(s) | 220, 1606 |
| TaqI | TCGA | 6 cut(s) | 473, 639, 887, 1360, 1431, 1565 |
| TasI | AATT | 8 cut(s) | 35, 151, 586, 594, 621, 1065, 1362, 1427 |
| TatI | WGTACW | 1 cut(s) | 509 |
| TfiI | GAWTC | 6 cut(s) | 323, 340, 545, 895, 1292, 1370 |
| Tru1I | TTAA | 4 cut(s) | 65, 99, 1083, 1596 |
| Tru9I | TTAA | 4 cut(s) | 65, 99, 1083, 1596 |
| TscAI | CASTG | 3 cut(s) | 238, 880, 1081 |
| TseI | GCWGC | 5 cut(s) | 107, 110, 1037, 1205, 1333 |
| TspDTI | ATGAA | 8 cut(s) | 117, 252, 315, 762, 908, 1523, 1563, 1614 |
| TspGWI | ACGGA | 2 cut(s) | 47, 1538 |
| TspRI | CASTG | 3 cut(s) | 238, 880, 1081 |
| VpaK11BI | GGWCC | 1 cut(s) | 820 |
| XapI | RAATTY | 1 cut(s) | 1427 |
| XceI | RCATGY | 2 cut(s) | 356, 1016 |
| XhoI | CTCGAG | 1 cut(s) | 1564 |
| XmnI | GAANNNNTTC | 1 cut(s) | 39 |
| XspI | CTAG | 4 cut(s) | 531, 954, 1178, 1476 |