RLG00000012112

DUF21 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0005240
Physical Location & Seq
Reverse (-)
15373529 .. 15382319
8791 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012112

Sequence Viewer

Length: 3090 bp
ATGATGACGTGGAACGGCGCCCGCGACATAGTGCTCGACTCGGATGACGTTCCGTTCGGGACCGGTGAGTGGTACCTCTACGCCGGAATCTCTTGCGTGCTGGTTTTGTTCGCCGGAATCATGTCCGGCCTTACGCTCGGATTGATGTCGCTCAATCTCGTCGACCTCGAGATTCTCCAGCGGAGCGGTTCCTCCGATCAGAAAAAGCAAGCCGCTGCGATTCTACCTGTGGTGAAAAAGCAGCACCAGCTTTTGGTCACTTTGCTTCTCTGCAATGCTTGTGCCATGGAGGCCCTTCCTTTATACCTTGATGAAATCTTTCACCCTGTTGTTGCCGTTTTGCTGTCTGTAACATTTGTTCTAATTTTCGGAGAGCCTTGCACTAGATTTAGTTTACCTCAATTACAATACTATTTCTTTTTGAATTCGTGGTTCCAGGTTCTGGATCTTGTTCTCGGACACGGGGATGATTTGTTCAGGCGAGCACAGTTGAAAGCCCTCGTCTCTATTCATGGCCTTGAGGCTGGAAAAGGAGGTGAACTAACACATGATGAGACAACGATCATCAGTGGAGCGCTAGATTTAACTGAAAAGACTGCTGAGGAGGCTATGACACCTATTGAATCAACATTTTCCTTGGATGTTAATTCAAAGTTAGACTGGGAAGCAATTGGGAAAATTCTTGCACGTGGTCATAGTAGAGTCCCTGTCTATTCTGGAAATCCCAAAAACATAATCGGCCTTTTACTGGTGAAAAGTCTCCTCACAGTGCGAGCAGAAACAGAGACTCCAGTTAGTGCAGTTTCCATTCGTAGAATGCCTAGGGTTCCAGCCGATATGCCTTTGTATGATATACTTAATGAGTTTCAAAAAGGAAGCAGTCACCTGGCTGCTGTAGTGAAGATCAAAGGAAAAACCAAGGCTCCTCTACTTTTTGCTGATAGAGAGAAACTCGAGGAGGCCAGACTAACCAATGGATGTGTTGCCATTGATGTCGATAAACATCCAAGGTCTCTGACAAACATGCCAACTGTTCAAGAAAATGATGCTACTACAAATGGCATTTCAAATTCATCAGATGATATGGAAGATGGGGAGGTGATTGGAATCATAACCCTGGAGGATGTTTTTGAAGAACTTCTGCAAGAAGAAATTGTAGATGAGACAGATGTATATATTGATGTACATAAGAGGATACGTGTGGCTGCTGCTGCAGCTGCTTCATCCATGTCCAGAGCTCAGTCAAGTCAGAAGTTGATTAGTCAAAAGCATGCAGGAGCTACAAATAAGCATGGACAAACCACGAAGAAGTCCGGGGAGGATGATGCACATTCGATGAGGTTTTCAGGGAGTTCACGGGAGCCTCTTCTAGGTGTTGATTTTCGTGTTCTGAAAGCTGTTGCTATAGAAAATTCTAATGATCTTGACGCAGCTGTCAATGATGTGCTGAATGAGGTTCTCCCTTTCTTGACCAAACATCCTGAGAGTCCTGCAAAGGTTCAGACTCCTAGCAGCCAACCAACTGCAGTTGAACCTGAGGAGCAGAGTAAAGAATTAAATCACGAGCAGGTAGTTAAGGAAGTAGAGGTTGAGTCTATTCCAGCAGCAAGATCCACTGATTTTGACAATGCCAACACTACTGATCAAACAGAATTTACAAGTGGTGCCTCCTCCCATGAGGTTTGTACACTGGTAGATGATACAAATTCATCACAGAATCTCCTTGCCTCTTCAGATGGAGATCAAGTAACTGGGCATGATGAACAAGAATTTGTGAACACTGGAAGTGAAGAACTGGAGCGACGTGGAAAGAAGATTAATGAGGATGATGACACTTTCATATTGCCAGAGGGGGTAGAAACATTTCTGAGTGATACTCAGCTTTATACTGAAACAACAGCAGCTGGTAATGTCGAAGCTGGGATTCAGCAGTCTACATCTGGAATGGCAACCAGTTCAGTACATGAAAAAGAGGGGGTTCATGACGGCTTGGTCAATGTGCCCTATGAATGGAAAGATTTTGATTTTTCTCAGACTGATGATTTGTCTCTGTTGGATGGTGAAAGTTCTATTGTTCAGCTGGATCCTCCTTTTCCAGAACATGCAACAGAAACTGTCCTTTCCAAGGAAGACGAGTCTTTCTGTAATATGGCTGATATGAAGGAGTCCACCACGAATAGCATATGTAATATTGATGTTCTTGAAGAGAGCATTGAAGATGCTAAACATAACAAGAGAGCATTGTTTTCAGCCATGGAGTCTGTTATCACCATGATGAGAGAAGTGGAACTGGAAGAGAAAGCTGTGGATCGTGTCACAGAGGAAGCCGCAAGGGGAGGTCAGGATATTATGGTTAAGGTGGAGGAACTAAAACTGATGTTGGCACATGCGAAGGATGCAAATGACATGCATGCTGGTGAAGTTTATGGGGAGAAGGCAATTTTAGCAACTGAAGTTAGAGAGCTTCAATGTCGATTGCTCAGTTTGTCAGATGAAAGGGATAAGTCACTTGCAATCCTTGACGAGATGCGTGAAACACTTGAAGCACGACTAACTGGAGTTGCAGAGTTGAGAAAAATGGCCGAGGGTGAAAAGCTAGAAAAGGAAGAATCTGCACGGAAAGCTCTTGCTGAACAAGAAGCCATCATGGAGAAAGTGGTTGAGGAGTCGAAGACACTGCAACAGGCAGCGGAGGAAAATTCCAAGTTGCGGGAGTTTCTGATGGACCGTGGCCACATTGTAGATATGCTACAAGGAGAAATCTCTGTCATTTGTCAGGATGTCAAGTTGCTGAAAGAGAAGTTTGATGATCGTGTTCCTCTAAGCCAGTCTGTTTCATCTAGCCAGACAAGTTGCATCTTAGCTTCTTCAGGCTCATCCTTGAAAAGCGCGGCATCTGACTTGCTTCTAGAACGAGTTGGGTCAGTTGGGTCATCTGAGTCACCAAAGACCATAGAGAGGGCAAGTCCTGTTGCTTCAGTTGACGGTCTCTCACCAAAATACAGACTAGAAGATAAAACAGTCAAGGTCGATAAACAAGCTCTTATGGCCGATGGGTGGGATGTCTTTGACGAAGATCTCTTGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03022 ko05169 ko05203 map03022 map05169 map05203
Pfam Domains
Protein Families
DUF21

Protein Analysis

1030

Amino Acids

112.92

Weight (kDa)

4.62

Isoelectric Point (pI)

43.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CNNM PF01595 30 - 125 6.4e-15 Cyclin M transmembrane N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1433, 1991
Acc36I ACCTGC 1 cut(s) 1558
Acc65I GGTACC 1 cut(s) 72
AccB1I GGYRCC 3 cut(s) 17, 72, 1664
AccB7I CCANNNNNTGG 2 cut(s) 253, 442
AccBSI CCGCTC 1 cut(s) 186
AccI GTMKAC 2 cut(s) 162, 1934
AccII CGCG 2 cut(s) 24, 2891
AciI CCGC 8 cut(s) 22, 181, 186, 213, 2328, 2690, 2710, 2891
AclWI GGATC 5 cut(s) 453, 1605, 2078, 2091, 2316
AcoI YGGCCR 3 cut(s) 2580, 2731, 3048
AcsI RAATTY 8 cut(s) 424, 678, 1069, 1411, 1652, 1705, 1769, 2698
AcuI CTGAAG 4 cut(s) 1716, 2472, 2853, 2961
AcvI CACGTG 1 cut(s) 689
AcyI GRCGYC 1 cut(s) 18
AfaI GTAC 4 cut(s) 74, 1185, 1687, 1962
AfeI AGCGCT 1 cut(s) 576
AflIII ACRYGT 1 cut(s) 1198
AgeI ACCGGT 1 cut(s) 62
AjiI CACGTC 2 cut(s) 9, 1805
AjnI CCWGG 3 cut(s) 435, 885, 1116
AloI GAACNNNNNNTCC 2 cut(s) 458, 490
Alw21I GWGCWC 3 cut(s) 36, 487, 1240
Alw26I GTCTC 8 cut(s) 508, 548, 764, 779, 1017, 1157, 2052, 2993
AlwI GGATC 5 cut(s) 453, 1605, 2078, 2091, 2316
AlwNI CAGNNNCTG 3 cut(s) 442, 1904, 2114
Ama87I CYCGRG 2 cut(s) 167, 953
Aor51HI AGCGCT 1 cut(s) 576
AoxI GGCC 8 cut(s) 127, 291, 514, 739, 960, 2580, 2731, 3048
ApoI RAATTY 8 cut(s) 424, 678, 1069, 1411, 1652, 1705, 1769, 2698
ArsI GACNNNNNNTTYG 4 cut(s) 38, 70, 2026, 2058
AseI ATTAAT 1 cut(s) 1818
AsiGI ACCGGT 1 cut(s) 62
Asp700I GAANNNNTTC 3 cut(s) 318, 1137, 1863
Asp718I GGTACC 1 cut(s) 72
AspA2I CCTAGG 1 cut(s) 821
AspLEI GCGC 3 cut(s) 20, 577, 2891
AspS9I GGNCC 3 cut(s) 60, 292, 2725
AsuC2I CCSGG 1 cut(s) 1315
AvaI CYCGRG 2 cut(s) 167, 953
AvaII GGWCC 2 cut(s) 60, 2725
AvrII CCTAGG 1 cut(s) 821
AxyI CCTNAGG 1 cut(s) 1536
BaeGI GKGCMC 1 cut(s) 2004
BalI TGGCCA 1 cut(s) 2733
BamHI GGATCC 1 cut(s) 2083
BanI GGYRCC 3 cut(s) 17, 72, 1664
BanII GRGCYC 1 cut(s) 1240
BauI CACGAG 1 cut(s) 1562
BbrPI CACGTG 1 cut(s) 689
BbsI GAAGAC 2 cut(s) 2136, 2678
Bbv12I GWGCWC 3 cut(s) 36, 487, 1240
BbvCI CCTCAGC 1 cut(s) 600
BccI CCATC 6 cut(s) 1085, 1730, 2051, 2651, 2716, 3047
BceAI ACGGC 3 cut(s) 31, 320, 2002
BcgI CGANNNNNNTGC 2 cut(s) 2659, 2693
BciT130I CCWGG 3 cut(s) 437, 887, 1118
BciVI GTATCC 1 cut(s) 1188
BclI TGATCA 1 cut(s) 1642
BcnI CCSGG 1 cut(s) 1315
BcoDI GTCTC 8 cut(s) 508, 548, 764, 779, 1017, 1157, 2052, 2993
BfaI CTAG 9 cut(s) 384, 578, 822, 1370, 1509, 2597, 2841, 2909, 3008
BfmI CTRYAG 4 cut(s) 894, 1212, 1404, 1524
BfoI RGCGCY 2 cut(s) 21, 578
BfuAI ACCTGC 1 cut(s) 1558
BfuI GTATCC 1 cut(s) 1188
BglI GCCNNNNNGGC 1 cut(s) 290
BglII AGATCT 1 cut(s) 3076
BlnI CCTAGG 1 cut(s) 821
Bme1390I CCNGG 4 cut(s) 437, 887, 1118, 1315
Bme18I GGWCC 2 cut(s) 60, 2725
BmeT110I CYCGRG 2 cut(s) 167, 953
BmgBI CACGTC 2 cut(s) 9, 1805
BmgT120I GGNCC 3 cut(s) 60, 292, 2725
BmrFI CCNGG 4 cut(s) 437, 887, 1118, 1315
BmrI ACTGGG 2 cut(s) 670, 1761
BmsI GCATC 7 cut(s) 1036, 1315, 2209, 2386, 2517, 2865, 2903
BmuI ACTGGG 2 cut(s) 670, 1761
BpiI GAAGAC 2 cut(s) 2136, 2678
BplI GAGNNNNNCTC 4 cut(s) 936, 968, 1861, 1893
BpmI CTGGAG 5 cut(s) 161, 774, 1139, 1817, 2577
Bpu10I CCTNAGC 1 cut(s) 600
BpuEI CTTGAG 1 cut(s) 539
BpuMI CCSGG 1 cut(s) 1315
BsaAI YACGTR 2 cut(s) 689, 1199
BsaBI GATNNNNATC 3 cut(s) 1002, 1106, 1740
BsaHI GRCGYC 1 cut(s) 18
BsaI GGTCTC 2 cut(s) 1017, 2993
BsaWI WCCGGW 1 cut(s) 62
BsaXI ACNNNNNCTCC 8 cut(s) 772, 802, 907, 937, 1704, 1731, 1734, 1761
Bse118I RCCGGY 1 cut(s) 62
Bse21I CCTNAGG 1 cut(s) 1536
Bse3DI GCAATG 1 cut(s) 280
Bse8I GATNNNNATC 3 cut(s) 1002, 1106, 1740
BseBI CCWGG 3 cut(s) 437, 887, 1118
BseJI GATNNNNATC 3 cut(s) 1002, 1106, 1740
BseMI GCAATG 1 cut(s) 280
BseMII CTCAG 9 cut(s) 591, 1253, 1473, 1527, 1859, 1892, 2045, 2494, 2928
BseRI GAGGAG 7 cut(s) 617, 752, 915, 971, 1553, 1660, 2678
BseSI GKGCMC 1 cut(s) 2004
BseYI CCCAGC 1 cut(s) 1919
BsgI GTGCAG 2 cut(s) 819, 2598
Bsh1236I CGCG 2 cut(s) 24, 2891
BshFI GGCC 8 cut(s) 129, 293, 516, 741, 962, 2582, 2733, 3050
BshNI GGYRCC 3 cut(s) 17, 72, 1664
BshTI ACCGGT 1 cut(s) 62
BsiHKAI GWGCWC 3 cut(s) 36, 487, 1240
BsiHKCI CYCGRG 2 cut(s) 167, 953
BsiSI CCGG 5 cut(s) 63, 84, 114, 126, 1314
BslFI GGGAC 2 cut(s) 73, 689
BsmAI GTCTC 8 cut(s) 508, 548, 764, 779, 1017, 1157, 2052, 2993
BsmBI CGTCTC 1 cut(s) 508
BsmFI GGGAC 2 cut(s) 73, 689
BsmI GAATGC 1 cut(s) 822
BsnI GGCC 8 cut(s) 129, 293, 516, 741, 962, 2582, 2733, 3050
Bso31I GGTCTC 2 cut(s) 1017, 2993
BsoBI CYCGRG 2 cut(s) 167, 953
Bsp1286I GDGCHC 4 cut(s) 36, 487, 1240, 2004
Bsp1407I TGTACA 2 cut(s) 1183, 1685
Bsp19I CCATGG 2 cut(s) 285, 2253
BspACI CCGC 8 cut(s) 22, 181, 186, 213, 2328, 2690, 2710, 2891
BspANI GGCC 8 cut(s) 129, 293, 516, 741, 962, 2582, 2733, 3050
BspCNI CTCAG 9 cut(s) 592, 1252, 1474, 1528, 1860, 1891, 2044, 2493, 2929
BspFNI CGCG 2 cut(s) 24, 2891
BspHI TCATGA 1 cut(s) 1981
BspMAI CTGCAG 2 cut(s) 1216, 1528
BspMI ACCTGC 1 cut(s) 1558
BspPI GGATC 5 cut(s) 453, 1605, 2078, 2091, 2316
BspT107I GGYRCC 3 cut(s) 17, 72, 1664
BspTNI GGTCTC 2 cut(s) 1017, 2993
BsrBI CCGCTC 1 cut(s) 186
BsrDI GCAATG 1 cut(s) 280
BsrFI RCCGGY 1 cut(s) 62
BsrGI TGTACA 2 cut(s) 1183, 1685
BssAI RCCGGY 1 cut(s) 62
BssNI GRCGYC 1 cut(s) 18
BssSI CACGAG 1 cut(s) 1562
BssT1I CCWWGG 7 cut(s) 285, 636, 821, 918, 1007, 2124, 2253
Bst2BI CACGAG 1 cut(s) 1562
Bst2UI CCWGG 3 cut(s) 437, 887, 1118
Bst4CI ACNGT 7 cut(s) 489, 769, 1033, 2116, 2729, 2987, 3022
Bst6I CTCTTC 4 cut(s) 1371, 1735, 2199, 2289
BstACI GRCGYC 1 cut(s) 18
BstAUI TGTACA 2 cut(s) 1183, 1685
BstBAI YACGTR 2 cut(s) 689, 1199
BstC8I GCNNGC 7 cut(s) 22, 98, 210, 483, 774, 1272, 2412
BstDSI CCRYGG 3 cut(s) 285, 2253, 2728
BstENI CCTNNNNNAGG 2 cut(s) 1368, 2123
BstFNI CGCG 2 cut(s) 24, 2891
BstH2I RGCGCY 2 cut(s) 21, 578
BstHHI GCGC 3 cut(s) 20, 577, 2891
BstMAI GTCTC 8 cut(s) 508, 548, 764, 779, 1017, 1157, 2052, 2993
BstNI CCWGG 3 cut(s) 437, 887, 1118
BstNSI RCATGY 6 cut(s) 1027, 1274, 2105, 2390, 2410, 2414
BstSCI CCNGG 4 cut(s) 435, 885, 1116, 1313
BstSFI CTRYAG 4 cut(s) 894, 1212, 1404, 1524
BstSLI GKGCMC 1 cut(s) 2004
BstUI CGCG 2 cut(s) 24, 2891
BstV2I GAAGAC 2 cut(s) 2136, 2678
BstX2I RGATCY 4 cut(s) 445, 1610, 2083, 3076
BstYI RGATCY 4 cut(s) 445, 1610, 2083, 3076
Bsu36I CCTNAGG 1 cut(s) 1536
BsuI GTATCC 1 cut(s) 1188
BsuRI GGCC 8 cut(s) 129, 293, 516, 741, 962, 2582, 2733, 3050
BtgI CCRYGG 3 cut(s) 285, 2253, 2728
BtrI CACGTC 2 cut(s) 9, 1805
BtsI GCAGTG 1 cut(s) 2675
BtsIMutI CAGTG 6 cut(s) 574, 774, 1614, 1688, 1779, 2675
BveI ACCTGC 1 cut(s) 1558
Cac8I GCNNGC 7 cut(s) 22, 98, 210, 483, 774, 1272, 2412
CaiI CAGNNNCTG 3 cut(s) 442, 1904, 2114
CciI TCATGA 1 cut(s) 1981
CfoI GCGC 3 cut(s) 20, 577, 2891
Cfr10I RCCGGY 1 cut(s) 62
Cfr13I GGNCC 3 cut(s) 60, 292, 2725
CseI GACGC 1 cut(s) 1436
Csp6I GTAC 4 cut(s) 73, 1184, 1686, 1961
CspAI ACCGGT 1 cut(s) 62
CspCI CAANNNNNGTGG 2 cut(s) 1603, 1638
CviQI GTAC 4 cut(s) 73, 1184, 1686, 1961
DinI GGCGCC 1 cut(s) 19
DrdI GACNNNNNNGTC 2 cut(s) 1433, 1991
DseDI GACNNNNNNGTC 2 cut(s) 1433, 1991
EaeI YGGCCR 3 cut(s) 2580, 2731, 3048
Eam1104I CTCTTC 4 cut(s) 1371, 1735, 2199, 2289
EarI CTCTTC 4 cut(s) 1371, 1735, 2199, 2289
Ecl136II GAGCTC 1 cut(s) 1238
Eco130I CCWWGG 7 cut(s) 285, 636, 821, 918, 1007, 2124, 2253
Eco24I GRGCYC 1 cut(s) 1240
Eco31I GGTCTC 2 cut(s) 1017, 2993
Eco47I GGWCC 2 cut(s) 60, 2725
Eco47III AGCGCT 1 cut(s) 576
Eco53kI GAGCTC 1 cut(s) 1238
Eco57I CTGAAG 4 cut(s) 1716, 2472, 2853, 2961
Eco72I CACGTG 1 cut(s) 689
Eco81I CCTNAGG 1 cut(s) 1536
Eco88I CYCGRG 2 cut(s) 167, 953
EcoICRI GAGCTC 1 cut(s) 1238
EcoNI CCTNNNNNAGG 2 cut(s) 1368, 2123
EcoO109I RGGNCCY 1 cut(s) 292
EcoRI GAATTC 1 cut(s) 424
EcoRII CCWGG 3 cut(s) 435, 885, 1116
EcoT14I CCWWGG 7 cut(s) 285, 636, 821, 918, 1007, 2124, 2253
EcoT22I ATGCAT 1 cut(s) 2412
EcoT38I GRGCYC 1 cut(s) 1240
EgeI GGCGCC 1 cut(s) 19
EheI GGCGCC 1 cut(s) 19
ErhI CCWWGG 7 cut(s) 285, 636, 821, 918, 1007, 2124, 2253
Esp3I CGTCTC 1 cut(s) 508
FaqI GGGAC 2 cut(s) 73, 689
FauI CCCGC 2 cut(s) 29, 2703
FauNDI CATATG 1 cut(s) 2183
FbaI TGATCA 1 cut(s) 1642
FblI GTMKAC 2 cut(s) 162, 1934
FriOI GRGCYC 1 cut(s) 1240
FspBI CTAG 9 cut(s) 384, 578, 822, 1370, 1509, 2597, 2841, 2909, 3008
GlaI GCGC 3 cut(s) 19, 576, 2890
GsaI CCCAGC 1 cut(s) 1923
GsuI CTGGAG 5 cut(s) 161, 774, 1139, 1817, 2577
HaeII RGCGCY 2 cut(s) 21, 578
HaeIII GGCC 8 cut(s) 129, 293, 516, 741, 962, 2582, 2733, 3050
HapII CCGG 5 cut(s) 63, 84, 114, 126, 1314
HgaI GACGC 1 cut(s) 1436
HhaI GCGC 3 cut(s) 20, 577, 2891
Hin1I GRCGYC 1 cut(s) 18
Hin6I GCGC 3 cut(s) 18, 575, 2889
HinP1I GCGC 3 cut(s) 18, 575, 2889
HincII GTYRAC 2 cut(s) 163, 2983
HindII GTYRAC 2 cut(s) 163, 2983
HpaII CCGG 5 cut(s) 63, 84, 114, 126, 1314
Hpy166II GTNNAC 9 cut(s) 163, 395, 539, 1355, 1688, 1777, 1935, 2169, 2983
Hpy8I GTNNAC 9 cut(s) 163, 395, 539, 1355, 1688, 1777, 1935, 2169, 2983
Hpy99I CGWCG 2 cut(s) 164, 1806
HpyAV CCTTC 4 cut(s) 305, 2155, 2386, 2428
HpyCH4III ACNGT 7 cut(s) 489, 769, 1033, 2116, 2729, 2987, 3022
HpyCH4IV ACGT 5 cut(s) 8, 48, 688, 1198, 1804
HpySE526I ACGT 5 cut(s) 8, 48, 688, 1198, 1804
Hsp92I GRCGYC 1 cut(s) 18
HspAI GCGC 3 cut(s) 18, 575, 2889
KasI GGCGCC 1 cut(s) 17
KpnI GGTACC 1 cut(s) 76
Ksp22I TGATCA 1 cut(s) 1642
LmnI GCTCC 7 cut(s) 183, 572, 928, 1277, 1360, 1540, 1798
LweI GCATC 7 cut(s) 1036, 1315, 2209, 2386, 2517, 2865, 2903
MaeI CTAG 9 cut(s) 384, 578, 822, 1370, 1509, 2597, 2841, 2909, 3008
MaeII ACGT 5 cut(s) 8, 48, 688, 1198, 1804
MaeIII GTNAC 7 cut(s) 256, 349, 881, 1747, 2314, 2505, 2940
MbiI CCGCTC 1 cut(s) 186
MfeI CAATTG 1 cut(s) 669
MflI RGATCY 4 cut(s) 445, 1610, 2083, 3076
MhlI GDGCHC 4 cut(s) 36, 487, 1240, 2004
MlsI TGGCCA 1 cut(s) 2733
MluNI TGGCCA 1 cut(s) 2733
Mly113I GGCGCC 1 cut(s) 18
MmeI TCCRAC 1 cut(s) 2034
Mox20I TGGCCA 1 cut(s) 2733
Mph1103I ATGCAT 1 cut(s) 2412
MroXI GAANNNNTTC 3 cut(s) 318, 1137, 1863
MscI TGGCCA 1 cut(s) 2733
MseI TTAA 7 cut(s) 584, 645, 858, 1556, 1575, 1818, 2355
MslI CAYNNNNRTG 3 cut(s) 465, 2273, 2415
Msp20I TGGCCA 1 cut(s) 2733
MspA1I CMGCKG 7 cut(s) 181, 215, 1217, 1433, 1904, 2080, 2690
MspI CCGG 5 cut(s) 63, 84, 114, 126, 1314
MspR9I CCNGG 4 cut(s) 437, 887, 1118, 1315
MunI CAATTG 1 cut(s) 669
Mva1269I GAATGC 1 cut(s) 822
MvaI CCWGG 3 cut(s) 437, 887, 1118
MvnI CGCG 2 cut(s) 24, 2891
NarI GGCGCC 1 cut(s) 18
NciI CCSGG 1 cut(s) 1315
NcoI CCATGG 2 cut(s) 285, 2253
NdeI CATATG 1 cut(s) 2183
NmeAIII GCCGAG 1 cut(s) 2608
NmuCI GTSAC 5 cut(s) 256, 881, 2314, 2505, 2940
NsiI ATGCAT 1 cut(s) 2412
NspI RCATGY 6 cut(s) 1027, 1274, 2105, 2390, 2410, 2414
PaeI GCATGC 2 cut(s) 1274, 2414
PaeR7I CTCGAG 2 cut(s) 167, 953
PagI TCATGA 1 cut(s) 1981
PcsI WCGNNNNNNNCGW 2 cut(s) 21, 165
PctI GAATGC 1 cut(s) 822
PdmI GAANNNNTTC 3 cut(s) 318, 1137, 1863
PfeI GAWTC 9 cut(s) 87, 117, 172, 220, 623, 1107, 1717, 1924, 2609
PflMI CCANNNNNTGG 2 cut(s) 253, 442
PinAI ACCGGT 1 cut(s) 62
PluTI GGCGCC 1 cut(s) 21
PmaCI CACGTG 1 cut(s) 689
PmlI CACGTG 1 cut(s) 689
Ppu21I YACGTR 2 cut(s) 689, 1199
PshBI ATTAAT 1 cut(s) 1818
Psp124BI GAGCTC 1 cut(s) 1240
Psp6I CCWGG 3 cut(s) 435, 885, 1116
PspCI CACGTG 1 cut(s) 689
PspFI CCCAGC 1 cut(s) 1919
PspGI CCWGG 3 cut(s) 435, 885, 1116
PspPI GGNCC 3 cut(s) 60, 292, 2725
PspXI VCTCGAGB 1 cut(s) 953
PsrI GAACNNNNNNTAC 2 cut(s) 342, 374
PstI CTGCAG 2 cut(s) 1216, 1528
PstNI CAGNNNCTG 3 cut(s) 442, 1904, 2114
PsuI RGATCY 4 cut(s) 445, 1610, 2083, 3076
PvuII CAGCTG 4 cut(s) 1217, 1433, 1904, 2080
RsaI GTAC 4 cut(s) 74, 1185, 1687, 1962
RsaNI GTAC 4 cut(s) 73, 1184, 1686, 1961
RseI CAYNNNNRTG 3 cut(s) 465, 2273, 2415
SacI GAGCTC 1 cut(s) 1240
SalI GTCGAC 1 cut(s) 161
SaqAI TTAA 7 cut(s) 584, 645, 858, 1556, 1575, 1818, 2355
Sau96I GGNCC 3 cut(s) 60, 292, 2725
ScrFI CCNGG 4 cut(s) 437, 887, 1118, 1315
SduI GDGCHC 4 cut(s) 36, 487, 1240, 2004
SfaNI GCATC 7 cut(s) 1036, 1315, 2209, 2386, 2517, 2865, 2903
SfcI CTRYAG 4 cut(s) 894, 1212, 1404, 1524
SfoI GGCGCC 1 cut(s) 19
Sfr274I CTCGAG 2 cut(s) 167, 953
SinI GGWCC 2 cut(s) 60, 2725
SlaI CTCGAG 2 cut(s) 167, 953
SmiMI CAYNNNNRTG 3 cut(s) 465, 2273, 2415
SmlI CTYRAG 3 cut(s) 167, 518, 953
SmoI CTYRAG 3 cut(s) 167, 518, 953
SphI GCATGC 2 cut(s) 1274, 2414
SsiI CCGC 8 cut(s) 22, 181, 186, 213, 2328, 2690, 2710, 2891
SspDI GGCGCC 1 cut(s) 17
SspI AATATT 1 cut(s) 2191
SspMI CTAG 9 cut(s) 384, 578, 822, 1370, 1509, 2597, 2841, 2909, 3008
SstI GAGCTC 1 cut(s) 1240
StyD4I CCNGG 4 cut(s) 435, 885, 1116, 1313
StyI CCWWGG 7 cut(s) 285, 636, 821, 918, 1007, 2124, 2253
TaaI ACNGT 7 cut(s) 489, 769, 1033, 2116, 2729, 2987, 3022
TaiI ACGT 5 cut(s) 11, 51, 691, 1201, 1807
TatI WGTACW 3 cut(s) 1183, 1685, 1960
TauI GCSGC 3 cut(s) 215, 2330, 2894
TfiI GAWTC 9 cut(s) 87, 117, 172, 220, 623, 1107, 1717, 1924, 2609
Tru1I TTAA 7 cut(s) 584, 645, 858, 1556, 1575, 1818, 2355
Tru9I TTAA 7 cut(s) 584, 645, 858, 1556, 1575, 1818, 2355
TscAI CASTG 6 cut(s) 574, 774, 1621, 1695, 1786, 2682
TseFI GTSAC 5 cut(s) 256, 881, 2314, 2505, 2940
Tsp45I GTSAC 5 cut(s) 256, 881, 2314, 2505, 2940
TspGWI ACGGA 2 cut(s) 42, 2632
TspRI CASTG 6 cut(s) 574, 774, 1621, 1695, 1786, 2682
Van91I CCANNNNNTGG 2 cut(s) 253, 442
VpaK11BI GGWCC 2 cut(s) 60, 2725
VspI ATTAAT 1 cut(s) 1818
XagI CCTNNNNNAGG 2 cut(s) 1368, 2123
XapI RAATTY 8 cut(s) 424, 678, 1069, 1411, 1652, 1705, 1769, 2698
XbaI TCTAGA 1 cut(s) 2908
XceI RCATGY 6 cut(s) 1027, 1274, 2105, 2390, 2410, 2414
XhoI CTCGAG 2 cut(s) 167, 953
XmaJI CCTAGG 1 cut(s) 821
XmiI GTMKAC 2 cut(s) 162, 1934
XmnI GAANNNNTTC 3 cut(s) 318, 1137, 1863
XspI CTAG 9 cut(s) 384, 578, 822, 1370, 1509, 2597, 2841, 2909, 3008
Zsp2I ATGCAT 1 cut(s) 2412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.